Pregenerated sensors for ALDH1A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013584Ensembl transcript IDs: ENSMUST00000034723.6
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTGTGAGGCAAGAGTGGTGAATGGACAAGGGGACCACGGGGTATaGCGGAGGAGGCCGGGAGAAACGTGGCAGTCTTGGCACACCGGT | + |
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Preference number: 1 (lower is better) Translates to: CCEARVVNGQGDHGV*RRRPGETWQSWHTG Trigger: ACCGGTGTGCCAAGACTGCCACGTTTCTCCCGGCCTCCTCCGTCATACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR CCA 90 bp | CAGCTCAGGAGAGAAGGGAAGGAAGCCAGTGCTGCCCACACCAAATaGGGTTCATTGGAAGGCAGAAAGAGGGTGGGGTTGGAGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: QLRREGKEASAAHTK*GSLEGRKRVGLEGR Trigger: CCTTCCCTCCAACCCCACCCTCTTTCTGCCTTCCAATGAACCCCATTTGGTGTGGGCAGCACTGGCTTCCTTCCCTTCTCTCCTGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR GCA 90 bp | GGGTTGGAGGGAAGGAGAGTCAGGCTTGCTTCACACCTCCCCCTCTaGAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGGTGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: GLEGRRVRLASHLPL*RLKLTCCEARVVNG Trigger: TCCATTCACCACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGCAAGCCTGACTCTCCTTCCCTCCAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR GCA 90 bp | TGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTaGACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: CGLKGASWLIVCSHG*TVGGTESLLEGLKA Trigger: GGCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR-3UTR CCA 90 bp | TTCACATGGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCGGCAAGAGTGGTGAATaGACAAGGGGACCACGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FTWVHCRRNREPAGRTQSGKSGE*TRGPRG Trigger: ACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCC...GCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCCATGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR-3UTR GCA 90 bp | TACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTTCACACCTCCCCCTCTaGAGGCTGAAGCTCACTTGT | + |
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Preference number: 2 (lower is better) Translates to: YCGLKGASWLIVCSHGCTSHLPL*RLKLTC Trigger: ACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGA...AGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCTATACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTCCCCCTCTGCAGGCTaGAGCTCACTTGTTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ILYCGLKGASWLIVCSHGSPSAG*SSLVVR Trigger: CCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGA...CCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTATAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGAGGAACAGCTGCCCACACCAAATaGGGTTCATTGGAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KGASWLIVCSHGCTVGGTAAHTK*GSLEGR Trigger: TCTGCCTTCCAATGAACCCCATTTGGTGTGGGCAGC...TGTTCCTCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGAGGAACAAGACTGGCTTCGATTTaGCAGCTCAGGAGAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: KGASWLIVCSHGCTVGGTRLASI*QLRREG Trigger: CCCTTCTCTCCTGAGCTGCCAAATCGAAGCCAGTCT...TGTTCCTCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR-3UTR TCA 90 bp | TACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGAAGCTCACTTGTTGTaGGGCAAGAGTGGTGAATGG | + |
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Preference number: 2 (lower is better) Translates to: YCGLKGASWLIVCSHGCTEAHLL*GKSGEW Trigger: CCATTCACCACTCTTGCCTCACAACAAGTGAGCTTC...AGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR TCA 72 bp | ACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTaGGGCAAGAGTGGTGAATGGACAAGGGGACCACGG | + |
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Preference number: 3 (lower is better) Translates to: TPPPLQAEAHLL*GKSGEWTRGPR Trigger: CCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR GCA 72 bp | GGAAGGAGAGTCAGGCTTGCTTCACACCTCCCCCTCTaGAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: GRRVRLASHLPL*RLKLTCCEARV Trigger: CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGCAAGCCTGACTCTCCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| 3UTR-3UTR CAA 90 bp | CAAAGCCACTGTCAGGGCTCTGTCAGTAACAGTATGGAGAGCTTGCTTAAAAACGAGACTGGCTTCGATTaGGCAGCTCAGGAGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QSHCQGSVSNSMESLLKNETGFD*AAQERR Trigger: CCTTCTCTCCTGAGCTGCCAAATCGAAGCCAGTCTC...GTTTTTAAGCAAGCTCTCCATACTGTTACTGACAGAGCCCTGACAGTGGCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | AGTGCTGCCCACACCAAATGGGGTTCATTGGAAGGCAGAAAGAGGGTGGGGTTGGCTGCAGCGAGGCCATaGGCGCGGCGGGGTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SAAHTKWGSLEGRKRVGLAAARP*ARRGRP Trigger: AGGCCGACCCCGCCGCGCTCATGGCCTCGCTGCAGC...CAACCCCACCCTCTTTCTGCCTTCCAATGAACCCCATTTGGTGTGGGCAGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | GGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCCACTGTCTCTCGAGGTTGGGCGTaGGCGACGGCAGGAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GCTVGGTESLLEGLKATVSRGWA*ATAGAA Trigger: TGCAGCTCCTGCCGTCGCCCACGCCCAACCTCGAGA...GACAGTGGCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | AAGCTCACTTGTTGTGAGGCAAGAGTGGTGAATGGACAAGGGGACCACGGGGTACTCCGCACTCCAGCTTaGCGCCCTCAGCCACACCGC | + |
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Preference number: 4 (lower is better) Translates to: KLTCCEARVVNGQGDHGVLRTPA*RPQPHR Trigger: GCGGTGTGGCTGAGGGCGCCAAGCTGGAGTGCGGAG...TACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACAAGTGAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | GCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGAGCGATTGCTGCCCCTaGTGTTGGCCCATACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ASHLPLCRLKLTCCEARVSDCCP*CWPIPW Trigger: CCAGGGTATGGGCCAACAGCAGGGGCAGCAATCGCT...CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | GCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGAGGGGCTCCCCACAATaGGCCTCTTGGCCCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASHLPLCRLKLTCCEARVRGSPQ*ASWPFP Trigger: TGGAAAGGGCCAAGAGGCGCATTGTGGGGAGCCCCT...CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | GCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGTCACCTCGCCCGGCATaGCGATCTCGCTGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ASHLPLCRLKLTCCEARVSPRPA*RSRWKS Trigger: TGACTTCCAGCGAGATCGCCATGCCGGGCGAGGTGA...CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | GTGGGGTTGGAGGGAAGGAGAGTCAGGCTTGCTTCACACCTCCCCCTCTGCAGGCATAGTTGCAAGAGTTaGCCTGTCCCGTTCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: VGLEGRRVRLASHLPLCRHSCKS*PVPFHQ Trigger: TTGGTGGAACGGGACAGGGCAACTCTTGCAACTATG...CCTGCAGAGGGGGAGGTGTGAAGCAAGCCTGACTCTCCTTCCCTCCAACCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | GCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGGACCCTGCTCAGTTGTaGGATCAAAGGGGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ASHLPLCRLKLTCCEARVDPAQL*DQRGSP Trigger: TGGGGAGCCCCTTTGATCCCACAACTGAGCAGGGTC...CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCCACTGTCAGGGCTCTGTCAGTAACAGTATGGAGAGCTTGCTTAAAAACGGCGACGGCAGGAGCTaGAGCGAGGCCATGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: QSHCQGSVSNSMESLLKNGDGRS*SEAMSA Trigger: CGCGCTCATGGCCTCGCTGCAGCTCCTGCCGTCGCC...GTTTTTAAGCAAGCTCTCCATACTGTTACTGACAGAGCCCTGACAGTGGCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | GGTATGACGGAGGAGGCCGGGAGAAACGTGGCAGTCTTGGCACACCGGTGCTCTACCTTGTCTGCTTCTTaGACTTCACACACTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GMTEEAGRNVAVLAHRCSTLSAS*TSHTCS Trigger: AGAGCAAGTGTGTGAAGTTCAAGAAGCAGACAAGGT...AGAGCACCGGTGTGCCAAGACTGCCACGTTTCTCCCGGCCTCCTCCGTCATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | AAGCTCACTTGTTGTGAGGCAAGAGTGGTGAATGGACAAGGGGACCACGGGGTAAAAGATGCGAGACCCTaGGGTGCAGCACTGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KLTCCEARVVNGQGDHGVKDARP*GAALAL Trigger: CAAGGCCAGTGCTGCACCGCAGGGTCTCGCATCTTT...TACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACAAGTGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | GCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGTGTTGGCCCATACCCTaGCAGGATATTGACGACTCC | + |
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Preference number: 4 (lower is better) Translates to: ASHLPLCRLKLTCCEARVCWPIP*QDIDDS Trigger: GGAGTCGTCAATATCCTGCCAGGGTATGGGCCAACA...CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | AGTGCTGCCCACACCAAATGGGGTTCATTGGAAGGCAGAAAGAGGGTGGGGTTGGGAAGTTCCACGGGATaGTCTGTCCACACACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SAAHTKWGSLEGRKRVGLGSSTG*SVHTLQ Trigger: TTGGAGTGTGTGGACAGATCATCCCGTGGAACTTCC...CAACCCCACCCTCTTTCTGCCTTCCAATGAACCCCATTTGGTGTGGGCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | AGTGCTGCCCACACCAAATGGGGTTCATTGGAAGGCAGAAAGAGGGTGGGGTTGTTGTCTATGCCGATGTaGGAAGCGATTGCTGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SAAHTKWGSLEGRKRVGLLSMPM*EAIAAP Trigger: AGGGGCAGCAATCGCTTCTCACATCGGCATAGACAA...CAACCCCACCCTCTTTCTGCCTTCCAATGAACCCCATTTGGTGTGGGCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | AAGCTCACTTGTTGTGAGGCAAGAGTGGTGAATGGACAAGGGGACCACGGGGTAGCAAGGCGGGCTGCTTaGACTGCCTTGTCTATATCC | + |
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Preference number: 4 (lower is better) Translates to: KLTCCEARVVNGQGDHGVARRAA*TALSIS Trigger: GGATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGC...TACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACAAGTGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | AAGCTCACTTGTTGTGAGGCAAGAGTGGTGAATGGACAAGGGGACCACGGGGTAGTGAGAAGCGATTGCTaGCCCTGCTGTTGGCCCATA | + |
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Preference number: 4 (lower is better) Translates to: KLTCCEARVVNGQGDHGVVRSDC*PCCWPI Trigger: TATGGGCCAACAGCAGGGGCAGCAATCGCTTCTCAC...TACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACAAGTGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | GCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGTTGCTCTCCTGTGGCTaGATTACAGACAGGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: ASHLPLCRLKLTCCEARVLLSCG*ITDREH Trigger: GTGTTCCCTGTCTGTAATCCAGCCACAGGAGAGCAA...CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | TTCACATGGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCTGTCCCAGCTTGCATTaGGGAGGATACCATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FTWVHCRRNREPAGRTQSCPSLH*GGYHES Trigger: GCTCTCATGGTATCCTCCGCAATGCAAGCTGGGACA...GCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCCATGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | GTGGGGTTGGAGGGAAGGAGAGTCAGGCTTGCTTCACACCTCCCCCTCTGCAGGTACAAGTCCAAAGTCTaGGTTATTGGCTCTTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: VGLEGRRVRLASHLPLCRYKSKV*VIGSFY Trigger: ATAGAAAGAGCCAATAACTCAGACTTTGGACTTGTA...CCTGCAGAGGGGGAGGTGTGAAGCAAGCCTGACTCTCCTTCCCTCCAACCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | GGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGAGCGGGCTGCTTGCACTaGCTTGTCTATATCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: GLKGASWLIVCSHGCTVGAGCLH*LVYIHL Trigger: AAGGTGGATATAGACAAGGCAGTGCAAGCAGCCCGC...TCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | GGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGACCGTTCCACCAAGTCTaGAAGCTTGTCCAACAGACG | + |
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Preference number: 4 (lower is better) Translates to: GLKGASWLIVCSHGCTVGPFHQV*KLVQQT Trigger: CGTCTGTTGGACAAGCTTGCAGACTTGGTGGAACGG...TCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCCACTGTCAGGGCTCTGTCAGTAACAGTATGGAGAGCTTGCTTAAAAACTGCTGCCCCTGCTGTTaGCCCATACCCTGGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: QSHCQGSVSNSMESLLKNCCPCC*PIPWQD Trigger: ATCCTGCCAGGGTATGGGCCAACAGCAGGGGCAGCA...GTTTTTAAGCAAGCTCTCCATACTGTTACTGACAGAGCCCTGACAGTGGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | AAGCTCACTTGTTGTGAGGCAAGAGTGGTGAATGGACAAGGGGACCACGGGGTAGGAATGGTCATTCCGTaGATTTTATCAGCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KLTCCEARVVNGQGDHGVGMVIP*ILSAQP Trigger: AGGCTGGGCTGATAAAATTCACGGAATGACCATTCC...TACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACAAGTGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | AAGCTCACTTGTTGTGAGGCAAGAGTGGTGAATGGACAAGGGGACCACGGGGTAGTTACCACAGCACAATaGGGGAGCAATTTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KLTCCEARVVNGQGDHGVVTTAQ*GSNFPG Trigger: ACCTGGAAAATTGCTCCCGCATTGTGCTGTGGTAAC...TACCCCGTGGTCCCCTTGTCCATTCACCACTCTTGCCTCACAACAAGTGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | GGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGAACACTTGCTCTCCTGTaGCTGGATTACAGACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GLKGASWLIVCSHGCTVGTLALL*LDYRQG Trigger: TCCCTGTCTGTAATCCAGCCACAGGAGAGCAAGTGT...TCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | TACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGAGCAATTTTCCAGGTaGACATCAGCAGGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: YCGLKGASWLIVCSHGCTEQFSR*TSAGGS Trigger: ACTTCCCCCTGCTGATGTTCACCTGGAAAATTGCTC...AGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | CAAAGCCACTGTCAGGGCTCTGTCAGTAACAGTATGGAGAGCTTGCTTAAAAACACACGGTGGGCTCAATaGAGAAGCCCTTCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QSHCQGSVSNSMESLLKNTRWAQ*RSPSFP Trigger: TGGGAAGGAAGGGCTTCTTCATTGAGCCCACCGTGT...GTTTTTAAGCAAGCTCTCCATACTGTTACTGACAGAGCCCTGACAGTGGCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CCA 90 bp | TACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTCCACAATGCGCCTCTTaGCCCTTTCCACACTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YCGLKGASWLIVCSHGCTPQCAS*PFPHFF Trigger: AAAGAAGTGTGGAAAGGGCCAAGAGGCGCATTGTGG...AGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR TCA 90 bp | CAAAGCCACTGTCAGGGCTCTGTCAGTAACAGTATGGAGAGCTTGCTTAAAAACAGATCTTGGTGTACTTaGTCTCGAGGTTGGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: QSHCQGSVSNSMESLLKNRSWCT*SRGWAW Trigger: CCACGCCCAACCTCGAGATCAAGTACACCAAGATCT...GTTTTTAAGCAAGCTCTCCATACTGTTACTGACAGAGCCCTGACAGTGGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | AGTGCTGCCCACACCAAATGGGGTTCATTGGAAGGCAGAAAGAGGGTGGGGTTGGTTACTTCTTCCAGCTaGTTCTTGAATAAGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SAAHTKWGSLEGRKRVGLVTSSS*FLNKLS Trigger: GGAAAGCTTATTCAAGAAGCAGCTGGAAGAAGTAAC...CAACCCCACCCTCTTTCTGCCTTCCAATGAACCCCATTTGGTGTGGGCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | GGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCCACTGTCGTCCAAGTCAGCATCTaGAAAAATAATATTAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GCTVGGTESLLEGLKATVVQVSI*KNNIRA Trigger: AGCCCTAATATTATTTTTGCAGATGCTGACTTGGAC...GACAGTGGCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | TACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTTATATCCACCTTGTCTaGTTCTTGAACTTCACACAC | + |
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Preference number: 4 (lower is better) Translates to: YCGLKGASWLIVCSHGCTYIHLV*FLNFTH Trigger: GTGTGTGAAGTTCAAGAAGCAGACAAGGTGGATATA...AGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | AAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGAGGAACACCACTCTCTGAGTTCTaGCATTCATTGTTAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: KGASWLIVCSHGCTVGGTPLSEF*HSLLIK Trigger: CTTTATTAACAATGAATGGCAGAACTCAGAGAGTGG...TGTTCCTCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCCACTGTCAGGGCTCTGTCAGTAACAGTATGGAGAGCTTGCTTAAAAACATGCAATCTTGTCTATaGCGATGTGAGAAGCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QSHCQGSVSNSMESLLKNMQSCL*RCEKRL Trigger: CAATCGCTTCTCACATCGGCATAGACAAGATTGCAT...GTTTTTAAGCAAGCTCTCCATACTGTTACTGACAGAGCCCTGACAGTGGCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR GCA 90 bp | ATTCTATACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGAGTAGAGCCTGTGAATaGAATCTTGTCTATGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILYCGLKGASWLIVCSHGSRACE*NLVYAD Trigger: ATCGGCATAGACAAGATTGCATTCACAGGCTCTACT...CCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTATAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS TCA 90 bp | TCTCGAGGTTGGGCGTGGGCGACGGCAGGAGCTGCAGCGAGGCCATaGGCGCGGCGGGGTCGGCCTTCACCTCGCCCGGCATGGCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SRGWAWATAGAAARP*ARRGRPSPRPAWRS Trigger: AGATCGCCATGCCGGGCGAGGTGAAGGCCGACCCCGCCGCGCTCATGGCCTCGCTGCAGCTCCTGCCGTCGCCCACGCCCAACCTCGAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 90 bp | TTGGTGTACTTGATCTCGAGGTTGGGCGTGGGCGACGGCAGGAGCTaGAGCGAGGCCATGAGCGCGGCGGGGTCGGCCTTCACCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVYLISRLGVGDGRS*SEAMSAAGSAFTSP Trigger: GGGCGAGGTGAAGGCCGACCCCGCCGCGCTCATGGCCTCGCTGCAGCTCCTGCCGTCGCCCACGCCCAACCTCGAGATCAAGTACACCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | AGGCCGGGAGAAACGTGGCAGTCTTGGCACACCGGTGCTCTTCAGCCTCGGCCTGGCAAGGCGGGCTGCTaGCACTGCCTTGTCTATATC | + |
|
Preference number: 5 (lower is better) Translates to: RPGETWQSWHTGALQPRPGKAGC*HCLVYI Trigger: GATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGCC...AGGCCGAGGCTGAAGAGCACCGGTGTGCCAAGACTGCCACGTTTCTCCCGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | AGTGCTGCCCACACCAAATGGGGTTCATTGGAAGGCAGAAAGAGGGTGGGGTTGCCTCCGCACTCCAGCTaGGCGCCCTCAGCCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: SAAHTKWGSLEGRKRVGLPPHSS*APSATP Trigger: CGGTGTGGCTGAGGGCGCCAAGCTGGAGTGCGGAGG...CAACCCCACCCTCTTTCTGCCTTCCAATGAACCCCATTTGGTGTGGGCAGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | AGGAGAGTCAGGCTTGCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTACTTGATCTCGAGGTaGGGCGTGGGCGACGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRVRLASHLPLCRLKLTCYLISR*GVGDGR Trigger: CCTGCCGTCGCCCACGCCCAACCTCGAGATCAAGTA...ACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGCAAGCCTGACTCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCCACTGTCGGAAAGCCAGCCTCCTaGATGAGGGCTCCCATATAC | + |
|
Preference number: 5 (lower is better) Translates to: GCTVGGTESLLEGLKATVGKPAS*MRAPIY Trigger: GTATATGGGAGCCCTCATCAAGGAGGCTGGCTTTCC...GACAGTGGCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | TTCACATGGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCTTCCTTCCCAGCCCTTaGCCTCCGCACTCCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FTWVHCRRNREPAGRTQSFLPSP*PPHSSL Trigger: CAAGCTGGAGTGCGGAGGCAAAGGGCTGGGAAGGAA...GCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCCATGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 90 bp | GAATGCAATCTTGTCTATGCCGATGTGAGAAGCGATTGCTGCCCCTaGTGTTGGCCCATACCCTGGCAGGATATTGACGACTCCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ECNLVYADVRSDCCP*CWPIPWQDIDDSGW Trigger: CCACCCGGAGTCGTCAATATCCTGCCAGGGTATGGGCCAACAGCAGGGGCAGCAATCGCTTCTCACATCGGCATAGACAAGATTGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | TACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTTTGCTGCCCCTGCTGTaGGCCCATACCCTGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YCGLKGASWLIVCSHGCTLLPLL*AHTLAG Trigger: TCCTGCCAGGGTATGGGCCAACAGCAGGGGCAGCAA...AGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTTGTGAGGCAAGAGTGATGTCATCAGTGACGTaGGAGAACACGGTGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASHLPLCRLKLTCCEARVMSSVT*ENTVGS Trigger: TGAGCCCACCGTGTTCTCCAACGTCACTGATGACAT...CACTCTTGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 90 bp | GCCTGTGAATGCAATCTTGTCTATGCCGATGTGAGAAGCGATTGCTaGCCCTGCTGTTGGCCCATACCCTGGCAGGATATTGACGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACECNLVYADVRSDC*PCCWPIPWQDIDDS Trigger: GGAGTCGTCAATATCCTGCCAGGGTATGGGCCAACAGCAGGGGCAGCAATCGCTTCTCACATCGGCATAGACAAGATTGCATTCACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GGTATGACGGAGGAGGCCGGGAGAAACGTGGCAGTCTTGGCACACCGGTGCTCTACCATGAGAGCCTTGTaGATGTCATTAGTGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GMTEEAGRNVAVLAHRCSTMRAL*MSLVKT Trigger: TGTCTTCACTAATGACATCAACAAGGCTCTCATGGT...AGAGCACCGGTGTGCCAAGACTGCCACGTTTCTCCCGGCCTCCTCCGTCATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GTGGGGTTGGAGGGAAGGAGAGTCAGGCTTGCTTCACACCTCCCCCTCTGCAGGGATACCATGAGAGCCTaGTTGATGTCATTAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGLEGRRVRLASHLPLCRDTMRA*LMSLVK Trigger: CTTCACTAATGACATCAACAAGGCTCTCATGGTATC...CCTGCAGAGGGGGAGGTGTGAAGCAAGCCTGACTCTCCTTCCCTCCAACCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCCACTGTCTTGAACTTCACACACTaGCTCTCCTGTGGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GCTVGGTESLLEGLKATVLNFTH*LSCGWI Trigger: AATCCAGCCACAGGAGAGCAAGTGTGTGAAGTTCAA...GACAGTGGCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGACCCACAATGCGCCTCTaGGCCCTTTCCACACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLKGASWLIVCSHGCTVGPTMRL*ALSTLL Trigger: AAGAAGTGTGGAAAGGGCCAAGAGGCGCATTGTGGG...TCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 90 bp | GGATTCCATAGTTGCAAGAGTTGCCCTGTCCCGTTCCACCAAGTCTaGAAGCTTGTCCAACAGACGTCCTCTTTCAGACGCATCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GFHSCKSCPVPFHQV*KLVQQTSSFRRIHP Trigger: AGGATGGATGCGTCTGAAAGAGGACGTCTGTTGGACAAGCTTGCAGACTTGGTGGAACGGGACAGGGCAACTCTTGCAACTATGGAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | TTCACATGGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCAAGATCTTGGTGTACTaGATCTCGAGGTTGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FTWVHCRRNREPAGRTQSKILVY*ISRLGV Trigger: CACGCCCAACCTCGAGATCAAGTACACCAAGATCTT...GCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCCATGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | TTCACATGGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCACCAAGTCTGCAAGCTaGTCCAACAGACGTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FTWVHCRRNREPAGRTQSTKSAS*SNRRPL Trigger: AAGAGGACGTCTGTTGGACAAGCTTGCAGACTTGGT...GCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCCATGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 90 bp | ATCCATCCTTCTCCACACAGAACCAAGAGAGAAGGCAAGGCGGGCTaGTTGCACTGCCTTGTCTATATCCACCTTGTCTGCTTCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IHPSPHRTKREGKAG*LHCLVYIHLVCFLN Trigger: GTTCAAGAAGCAGACAAGGTGGATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGCCTTCTCTCTTGGTTCTGTGTGGAGAAGGATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GTGTGTTCACATGGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCTCTTCCAGCTGCTTCTaGAATAAGCTTTCCAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCSHGCTVGGTESLLEGLSSSCF*NKLSNL Trigger: GAGGTTGGAAAGCTTATTCAAGAAGCAGCTGGAAGA...GAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCCATGTGAACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | AGGAGAGTCAGGCTTGCTTCACACCTCCCCCTCTGCAGGCTGAAGCTCACTTGTAGCTCCAGGACTTTGTaGTATTGTTTCTTATCGATC | + |
|
Preference number: 5 (lower is better) Translates to: RRVRLASHLPLCRLKLTCSSRTL*YCFLSI Trigger: GATCGATAAGAAACAATACAACAAAGTCCTGGAGCT...ACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGCAAGCCTGACTCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GGGTGCACTGTAGGAGGAACAGAGAGCCTGCTGGAAGGACTCAAAGCCACTGTCTTGTTAATAAAGATCTaGGTGTACTTGATCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCTVGGTESLLEGLKATVLLIKI*VYLISR Trigger: CCTCGAGATCAAGTACACCAAGATCTTTATTAACAA...GACAGTGGCTTTGAGTCCTTCCAGCAGGCTCTCTGTTCCTCCTACAGTGCACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | TACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTCACCTTGTCTGCTTCTaGAACTTCACACACTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YCGLKGASWLIVCSHGCTHLVCF*NFTHLL Trigger: GAGCAAGTGTGTGAAGTTCAAGAAGCAGACAAGGTG...AGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGACAGGACTTTGTTGTATaGTTTCTTATCGATCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLKGASWLIVCSHGCTVGQDFVV*FLIDLR Trigger: CCTCAGATCGATAAGAAACAATACAACAAAGTCCTG...TCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | GGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGTGCACTGTAGGAGAGTTCTGCCATTCATaGTTAATAAAGATCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLKGASWLIVCSHGCTVGEFCHS*LIKILV Trigger: CACCAAGATCTTTATTAACAATGAATGGCAGAACTC...TCCTACAGTGCACCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 90 bp | TCCATCTACAGGAATGGTCATTCCGTGAATTTTATCAGCCCAGCCTaGATAATACCTCAGGGTTTTGATGACTCCCTGCAAATCGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: SIYRNGHSVNFISPA*IIPQGFDDSLQIDV Trigger: TACATCGATTTGCAGGGAGTCATCAAAACCCTGAGGTATTATGCAGGCTGGGCTGATAAAATTCACGGAATGACCATTCCTGTAGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS-3UTR CAA 90 bp | ATTCTATACTGTGGGTTGAAGGGAGCTAGCTGGTTAATCGTGTGTTCACATGGGCCAAAGTCTGAGTTATaGGCTCTTTCTATAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILYCGLKGASWLIVCSHGPKSEL*ALSITS Trigger: TGAAGTTATAGAAAGAGCCAATAACTCAGACTTTGG...CCCATGTGAACACACGATTAACCAGCTAGCTCCCTTCAACCCACAGTATAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS TCA 90 bp | CTTGTTGATGTCATTAGTGAAGACAGCTGCTACAAGTCCAAAGTCTaGGTTATTGGCTCTTTCTATAACTTCATCCATAGTCTTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LVDVISEDSCYKSKV*VIGSFYNFIHSLKP Trigger: AGGTTTAAGACTATGGATGAAGTTATAGAAAGAGCCAATAACTCAGACTTTGGACTTGTAGCAGCTGTCTTCACTAATGACATCAACAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS TCA 72 bp | TGGGCGTGGGCGACGGCAGGAGCTGCAGCGAGGCCATaGGCGCGGCGGGGTCGGCCTTCACCTCGCCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WAWATAGAAARP*ARRGRPSPRPA Trigger: TGCCGGGCGAGGTGAAGGCCGACCCCGCCGCGCTCATGGCCTCGCTGCAGCTCCTGCCGTCGCCCACGCCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | TTGATCTCGAGGTTGGGCGTGGGCGACGGCAGGAGCTaGAGCGAGGCCATGAGCGCGGCGGGGTCGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LISRLGVGDGRS*SEAMSAAGSAF Trigger: GAAGGCCGACCCCGCCGCGCTCATGGCCTCGCTGCAGCTCCTGCCGTCGCCCACGCCCAACCTCGAGATCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 90 bp | TGCCATTCATTGTTAATAAAGATCTTGGTGTACTTGATCTCGAGGTaGGGCGTGGGCGACGGCAGGAGCTGCAGCGAGGCCATGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CHSLLIKILVYLISR*GVGDGRSCSEAMSA Trigger: CGCGCTCATGGCCTCGCTGCAGCTCCTGCCGTCGCCCACGCCCAACCTCGAGATCAAGTACACCAAGATCTTTATTAACAATGAATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | CTTGTCTATGCCGATGTGAGAAGCGATTGCTGCCCCTaGTGTTGGCCCATACCCTGGCAGGATATTGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVYADVRSDCCP*CWPIPWQDIDD Trigger: GTCGTCAATATCCTGCCAGGGTATGGGCCAACAGCAGGGGCAGCAATCGCTTCTCACATCGGCATAGACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 72 bp | TTGTTAATAAAGATCTTGGTGTACTTGATCTCGAGGTaGGGCGTGGGCGACGGCAGGAGCTGCAGCGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLIKILVYLISR*GVGDGRSCSEA Trigger: GGCCTCGCTGCAGCTCCTGCCGTCGCCCACGCCCAACCTCGAGATCAAGTACACCAAGATCTTTATTAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | TCTCCACACAGAACCAAGAGAGAAGGCAAGGCGGGCTaGTTGCACTGCCTTGTCTATATCCACCTTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPHRTKREGKAG*LHCLVYIHLVC Trigger: GCAGACAAGGTGGATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGCCTTCTCTCTTGGTTCTGTGTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | AGTTGCAAGAGTTGCCCTGTCCCGTTCCACCAAGTCTaGAAGCTTGTCCAACAGACGTCCTCTTTCAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: SCKSCPVPFHQV*KLVQQTSSFRR Trigger: GCGTCTGAAAGAGGACGTCTGTTGGACAAGCTTGCAGACTTGGTGGAACGGGACAGGGCAACTCTTGCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 72 bp | CCACACAGAACCAAGAGAGAAGGCAAGGCGGGCTGCTaGCACTGCCTTGTCTATATCCACCTTGTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PHRTKREGKAGC*HCLVYIHLVCF Trigger: GAAGCAGACAAGGTGGATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGCCTTCTCTCTTGGTTCTGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 72 bp | AGAGTTGCCCTGTCCCGTTCCACCAAGTCTGCAAGCTaGTCCAACAGACGTCCTCTTTCAGACGCATCCATC | + |
|
Preference number: 6 (lower is better) Translates to: RVALSRSTKSAS*SNRRPLSDASI Trigger: GATGGATGCGTCTGAAAGAGGACGTCTGTTGGACAAGCTTGCAGACTTGGTGGAACGGGACAGGGCAACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | CACACAGAACCAAGAGAGAAGGCAAGGCGGGCTGCTTaGACTGCCTTGTCTATATCCACCTTGTCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HTEPREKARRAA*TALSISTLSAS Trigger: AGAAGCAGACAAGGTGGATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGCCTTCTCTCTTGGTTCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | TGCAATCTTGTCTATGCCGATGTGAGAAGCGATTGCTaGCCCTGCTGTTGGCCCATACCCTGGCAGGATATT | + |
|
Preference number: 6 (lower is better) Translates to: CNLVYADVRSDC*PCCWPIPWQDI Trigger: AATATCCTGCCAGGGTATGGGCCAACAGCAGGGGCAGCAATCGCTTCTCACATCGGCATAGACAAGATTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 90 bp | ATAGTTGCAAGAGTTGCCCTGTCCCGTTCCACCAAGTCTGCAAGCTaGTCCAACAGACGTCCTCTTTCAGACGCATCCATCCTTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IVARVALSRSTKSAS*SNRRPLSDASILLH Trigger: GTGGAGAAGGATGGATGCGTCTGAAAGAGGACGTCTGTTGGACAAGCTTGCAGACTTGGTGGAACGGGACAGGGCAACTCTTGCAACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 90 bp | CATCCTTCTCCACACAGAACCAAGAGAGAAGGCAAGGCGGGCTGCTaGCACTGCCTTGTCTATATCCACCTTGTCTGCTTCTTGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HPSPHRTKREGKAGC*HCLVYIHLVCFLNF Trigger: GAAGTTCAAGAAGCAGACAAGGTGGATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGCCTTCTCTCTTGGTTCTGTGTGGAGAAGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | AGAACCAAGAGAGAAGGCAAGGCGGGCTGCTTGCACTaGCTTGTCTATATCCACCTTGTCTGCTTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RTKREGKAGCLH*LVYIHLVCFLN Trigger: GTTCAAGAAGCAGACAAGGTGGATATAGACAAGGCAGTGCAAGCAGCCCGCCTTGCCTTCTCTCTTGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
||
| CDS GCA 72 bp | GTGAGCCTGCTCCACAGCGTAGTCCAAGTCAGCATCTaGAAAAATAATATTAGGGCTCTTCCCTCCGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSLLHSVVQVSI*KNNIRALPSEF Trigger: GAACTCGGAGGGAAGAGCCCTAATATTATTTTTGCAGATGCTGACTTGGACTACGCTGTGGAGCAGGCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 72 bp | CCAGCTTGCATTGCGGAGGATACCATGAGAGCCTTGTaGATGTCATTAGTGAAGACAGCTGCTACAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PACIAEDTMRAL*MSLVKTAATSP Trigger: TGGACTTGTAGCAGCTGTCTTCACTAATGACATCAACAAGGCTCTCATGGTATCCTCCGCAATGCAAGCTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 72 bp | GTCCCAGCTTGCATTGCGGAGGATACCATGAGAGCCTaGTTGATGTCATTAGTGAAGACAGCTGCTACAAGT | + |
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Preference number: 6 (lower is better) Translates to: VPACIAEDTMRA*LMSLVKTAATS Trigger: ACTTGTAGCAGCTGTCTTCACTAATGACATCAACAAGGCTCTCATGGTATCCTCCGCAATGCAAGCTGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 90 bp | CAAACTGTCCCAGCTTGCATTGCGGAGGATACCATGAGAGCCTTGTaGATGTCATTAGTGAAGACAGCTGCTACAAGTCCAAAGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QTVPACIAEDTMRAL*MSLVKTAATSPKSE Trigger: CTCAGACTTTGGACTTGTAGCAGCTGTCTTCACTAATGACATCAACAAGGCTCTCATGGTATCCTCCGCAATGCAAGCTGGGACAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 90 bp | ATCCAAACTGTCCCAGCTTGCATTGCGGAGGATACCATGAGAGCCTaGTTGATGTCATTAGTGAAGACAGCTGCTACAAGTCCAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: IQTVPACIAEDTMRA*LMSLVKTAATSPKS Trigger: AGACTTTGGACTTGTAGCAGCTGTCTTCACTAATGACATCAACAAGGCTCTCATGGTATCCTCCGCAATGCAAGCTGGGACAGTTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 72 bp | CACACCGCTCTGGATAAGCTCCAGGACTTTGTTGTATaGTTTCTTATCGATCTGAGGACCCTGCTCAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: HTALDKLQDFVV*FLIDLRTLLSC Trigger: ACAACTGAGCAGGGTCCTCAGATCGATAAGAAACAATACAACAAAGTCCTGGAGCTTATCCAGAGCGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | AGGAATGGTCATTCCGTGAATTTTATCAGCCCAGCCTaGATAATACCTCAGGGTTTTGATGACTCCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: RNGHSVNFISPA*IIPQGFDDSLQ Trigger: TTGCAGGGAGTCATCAAAACCCTGAGGTATTATGCAGGCTGGGCTGATAAAATTCACGGAATGACCATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | TTGAATAAGCTTTCCAACCTCAGTAGAGCCTGTGAATaGAATCTTGTCTATGCCGATGTGAGAAGCGATTGC | + |
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Preference number: 6 (lower is better) Translates to: LNKLSNLSRACE*NLVYADVRSDC Trigger: GCAATCGCTTCTCACATCGGCATAGACAAGATTGCATTCACAGGCTCTACTGAGGTTGGAAAGCTTATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS GCA 72 bp | ATTGTAACAATTGATCCAAACTGTCCCAGCTTGCATTaGGGAGGATACCATGAGAGCCTTGTTGATGTCATT | + |
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Preference number: 6 (lower is better) Translates to: IVTIDPNCPSLH*GGYHESLVDVI Trigger: AATGACATCAACAAGGCTCTCATGGTATCCTCCGCAATGCAAGCTGGGACAGTTTGGATCAATTGTTACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS TCA 72 bp | GTCATTAGTGAAGACAGCTGCTACAAGTCCAAAGTCTaGGTTATTGGCTCTTTCTATAACTTCATCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: VISEDSCYKSKV*VIGSFYNFIHS Trigger: ACTATGGATGAAGTTATAGAAAGAGCCAATAACTCAGACTTTGGACTTGTAGCAGCTGTCTTCACTAATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 72 bp | GTGAAGACAGCTGCTACAAGTCCAAAGTCTGAGTTATaGGCTCTTTCTATAACTTCATCCATAGTCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: VKTAATSPKSEL*ALSITSSIVLN Trigger: GTTTAAGACTATGGATGAAGTTATAGAAAGAGCCAATAACTCAGACTTTGGACTTGTAGCAGCTGTCTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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| CDS CAA 90 bp | ATGTCATTAGTGAAGACAGCTGCTACAAGTCCAAAGTCTGAGTTATaGGCTCTTTCTATAACTTCATCCATAGTCTTAAACCTCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: MSLVKTAATSPKSEL*ALSITSSIVLNLKI Trigger: AATTTTGAGGTTTAAGACTATGGATGAAGTTATAGAAAGAGCCAATAACTCAGACTTTGGACTTGTAGCAGCTGTCTTCACTAATGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034723.6 |
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