Pregenerated sensors for ALCAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022636Ensembl transcript IDs: ENSMUST00000023312.14, ENSMUST00000164728.8, ENSMUST00000167115.8, ENSMUST00000168071.2, ENSMUST00000170035.8
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAACAAGTGCCACTGGAGAGAAGAAAGTCCAGAACTTGAAGACTaGGACTTAGCCTCCTTCCAGTGTGACGCGGTACATGGAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: ANKCHWREESPELED*DLASFQCDAVHGGA Trigger: AGCACCTCCATGTACCGCGTCACACTGGAAGGAGGCTAAGTCTCAGTCTTCAAGTTCTGGACTTTCTTCTCTCCAGTGGCACTTGTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR GCA 90 bp | TTTTCCAGTTTAAGTTATACACATAAATCTGGGAAGAAATGGCGGTaGAGTGGGATCCCAGAAACGAAGCCTCCACCTGAAAGAGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: FSSLSYTHKSGKKWR*SGIPETKPPPERAK Trigger: CTTTGCTCTTTCAGGTGGAGGCTTCGTTTCTGGGATCCCACTGCACCGCCATTTCTTCCCAGATTTATGTGTATAACTTAAACTGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR GCA 90 bp | AAAGTGACAGGGCAAACAAAACAGAGTATTGTTCTAACTTTTCACTaGACATCTCCCATCAATGCTGGACGTATCTTCCTCGCTAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: KVTGQTKQSIVLTFH*TSPINAGRIFLASS Trigger: GCTGCTAGCGAGGAAGATACGTCCAGCATTGATGGGAGATGTGCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGCCCTGTCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| 3UTR TCA 90 bp | TCATATCCTATGGTGCTCCTAACTCTCAAGATAAGAAACAGCTTCTaGTTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTG | + |
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Preference number: 1 (lower is better) Translates to: SYPMVLLTLKIRNSF*LGKICVPISQLPPL Trigger: CAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGGAGCACCATAGGATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR TCA 90 bp | CGTCCTCACTATGAAGTGAGACAAACCTCCGTGTGTTCAATTTGGTaGAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: RPHYEVRQTSVCSIW*SVCLILEMTSLAGV Trigger: TACTCCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGTCTCACTTCATAGTGAGGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
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| 3UTR TCA 90 bp | ACTGAGACACTATTGCTCAGATATCAAATGGTTACACATGTCCAATaGCACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: TETLLLRYQMVTHVQ*HVSQSAEVAKHYSQ Trigger: TTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAACCATTTGATATCTGAGCAATAGTGTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR GCA 90 bp | AGTTTACTCTTTATTTTGACAAATCAATGGAAGTTAGAGGGCATATaGCAGTTGTCACTGGTAGCGAGGGAAAGTGACAGGGCAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: SLLFILTNQWKLEGI*QLSLVARESDRANK Trigger: TTTGTTTGCCCTGTCACTTTCCCTCGCTACCAGTGACAACTGGCATATGCCCTCTAACTTCCATTGATTTGTCAAAATAAAGAGTAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTCTTGTAAACATCTGCTCATGGGCAAGAGCTCTGAGCCAGTCATGCTGCCTCAGTCTGCAGAAGTaGCAAAACATTATTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SSLVNICSWARALSQSCCLSLQK*QNIIPN Trigger: GTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAG...GCAGCATGACTGGCTCAGAGCTCTTGCCCATGAGCAGATGTTTACAAGAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR-3UTR TCA 90 bp | GGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGACGAAATACAACATATaGCCTATTATCATGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GKICVPISQLPPLSFRSKTKYNI*PIIMAA Trigger: GGCAGCCATGATAATAGGTCATATGTTGTATTTCGT...CTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR CAA 90 bp | CTCTTTATTTTGACAAATCAATGGAAGTTAGAGGGCATATGCCAGTaGTCACTGGTAGCGAGGGAAAGTGACAGGGCAAACAAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LFILTNQWKLEGICQ*SLVARESDRANKTE Trigger: CTCTGTTTTGTTTGCCCTGTCACTTTCCCTCGCTACCAGTGACAACTGGCATATGCCCTCTAACTTCCATTGATTTGTCAAAATAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAAATCAGAACCGTACCTaGTCAGACTATCCATATAAA | + |
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Preference number: 2 (lower is better) Translates to: GQDMCPNLTTATFELQVKNQNRT*SDYPYK Trigger: TTTATATGGATAGTCTGAGCAGGTACGGTTCTGATT...TTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGCAAAGTTTAAAGTCTAGTCGCAAGTCGCTACTGGCCCTTATCCAGTCTGACAGCTTGGTAGAATaGACTGCTTTATACTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: KEQSLKSSRKSLLALIQSDSLVE*TALYLN Trigger: GTTCAAGTATAAAGCAGTTCATTCTACCAAGCTGTC...AGACTGGATAAGGGCCAGTAGCGACTTGCGACTAGACTTTAAACTTTGCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTAATCAGAACCGTACCTaGTCAGACTATCCATATAAA | + |
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Preference number: 2 (lower is better) Translates to: LLIGQDMCPNLTTATFELNQNRT*SDYPYK Trigger: TTTATATGGATAGTCTGAGCAGGTACGGTTCTGATT...AAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCAAACAAAACAGAGTATTGTTCTAACTTTTCACTGCACATCTCCCATCAATCCTGTGAAGAGGCATTaGAGAGACTCAAGCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: GQTKQSIVLTFHCTSPINPVKRH*RDSSIH Trigger: ATGGATGCTTGAGTCTCTGCAATGCCTCTTCACAGG...ATTGATGGGAGATGTGCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGACAGGGCAAACAAAACAGAGTATTGTTCTAACTTTTCACTGCACATCTTCTAGAAAGTGCCTGTaGAGAGGCATTGCAGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: KVTGQTKQSIVLTFHCTSSRKCL*RGIAET Trigger: AGTCTCTGCAATGCCTCTTCACAGGCACTTTCTAGA...AGATGTGCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGCCCTGTCACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| 3UTR-3UTR TCA 90 bp | CCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGGAACTGCTTTATACTTaGACCATGAATTGCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: PISQLPPLSFRSKYVQRKELLYT*TMNCCH Trigger: ATGACAGCAATTCATGGTTCAAGTATAAAGCAGTTC...CTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGAACTGCTTTATACTTaGACCATGAATTGCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: KICVPISQLPPLSFRSKYELLYT*TMNCCH Trigger: ATGACAGCAATTCATGGTTCAAGTATAAAGCAGTTC...ATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR-3UTR TCA 90 bp | GATAGCAATCAGAATCAGAACCGTACCTGCTCAGACTATCCATATAAACAATTGTTCTCTAAGATCCTGTaGCAGCTTGGTAGAATGAAC | + |
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Preference number: 2 (lower is better) Translates to: DSNQNQNRTCSDYPYKQLFSKIL*QLGRMN Trigger: GTTCATTCTACCAAGCTGTCACAGGATCTTAGAGAA...CAATTGTTTATATGGATAGTCTGAGCAGGTACGGTTCTGATTCTGATTGCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR-3UTR TCA 90 bp | TTACACATGTCCAATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTACGAAATACAACATATaGCCTATTATCATGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LHMSNDTSLSLQKWQNIITKYNI*PIIMAA Trigger: GGCAGCCATGATAATAGGTCATATGTTGTATTTCGT...AATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR-3UTR TCA 90 bp | GATAGCAATCAGAATCAGAACCGTACCTGCTCAGACTATCCATATAAACAATTGGACAGCTTGGTAGAATaGACTGCTTTATACTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: DSNQNQNRTCSDYPYKQLDSLVE*TALYLN Trigger: GTTCAAGTATAAAGCAGTTCATTCTACCAAGCTGTC...CAATTGTTTATATGGATAGTCTGAGCAGGTACGGTTCTGATTCTGATTGCTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR-3UTR GCA 90 bp | TTATCTCAAGGTGCATTCAATATCTGTAGCGTAGTTAACAAAAACACACACGAAATTTACATCGTGATCTaGGACTATGGGGATATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LSQGAFNICSVVNKNTHEIYIVI*DYGDMS Trigger: GCTCATATCCCCATAGTCGCAGATCACGATGTAAAT...TTCGTGTGTGTTTTTGTTAACTACGCTACAGATATTGAATGCACCTTGAGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR TCA 72 bp | TGCCACTGGAGAGAAGAAAGTCCAGAACTTGAAGACTaGGACTTAGCCTCCTTCCAGTGTGACGCGGTACAT | + |
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Preference number: 3 (lower is better) Translates to: CHWREESPELED*DLASFQCDAVH Trigger: ATGTACCGCGTCACACTGGAAGGAGGCTAAGTCTCAGTCTTCAAGTTCTGGACTTTCTTCTCTCCAGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR GCA 72 bp | AACATCTGCTCATGGGCAAGAGCTCTGAGCCAGTCATaGTGCTGTCTAGGTTCTAACAGCTGTTTGTGGACT | + |
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Preference number: 3 (lower is better) Translates to: NICSWARALSQS*CCLGSNSCLWT Trigger: AGTCCACAAACAGCTGTTAGAACCTAGACAGCAGCATGACTGGCTCAGAGCTCTTGCCCATGAGCAGATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR CCA 72 bp | CAAGCAATCTTTTCCTCTCTTGTAAACATCTGCTCATaGGCAAGAGCTCTGAGCCAGTCATGCTGCTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: QAIFSSLVNICS*ARALSQSCCCL Trigger: TAGACAGCAGCATGACTGGCTCAGAGCTCTTGCCCATGAGCAGATGTTTACAAGAGAGGAAAAGATTGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR GCA 72 bp | TTAAGTTATACACATAAATCTGGGAAGAAATGGCGGTaGAGTGGGATCCCAGAAACGAAGCCTCCACCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LSYTHKSGKKWR*SGIPETKPPPE Trigger: TTCAGGTGGAGGCTTCGTTTCTGGGATCCCACTGCACCGCCATTTCTTCCCAGATTTATGTGTATAACTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR GCA 72 bp | GAACCGGTTAGAAACCTGTATCTAGTTGCCAACAAGTaGCACTGGAGAGAAGAAAGTCCAGAACTTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: EPVRNLYLVANK*HWREESPELED Trigger: GTCTTCAAGTTCTGGACTTTCTTCTCTCCAGTGGCACTTGTTGGCAACTAGATACAGGTTTCTAACCGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR CCA 72 bp | TCCAGTTTAAGTTATACACATAAATCTGGGAAGAAATaGCGGTGCAGTGGGATCCCAGAAACGAAGCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SSLSYTHKSGKK*RCSGIPETKPP Trigger: TGGAGGCTTCGTTTCTGGGATCCCACTGCACCGCCATTTCTTCCCAGATTTATGTGTATAACTTAAACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR GCA 72 bp | AATGGTTACACATGTCCAATGACACGTCTCTCAGTCTaGAGAAGTGGCAAAACATTATTCCCAACCTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: NGYTCPMTRLSV*RSGKTLFPTSN Trigger: GTTGGAGGTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR CCA 72 bp | CACATGTCCAATGACACGTCTCTCAGTCTGCAGAAGTaGCAAAACATTATTCCCAACCTCCAACAGAGATTA | + |
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Preference number: 3 (lower is better) Translates to: HMSNDTSLSLQK*QNIIPNLQQRL Trigger: TAATCTCTGTTGGAGGTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR TCA 72 bp | ATGGTGCTCCTAACTCTCAAGATAAGAAACAGCTTCTaGTTGGGCAAGATATGTGTCCCAATCTCACAACTG | + |
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Preference number: 3 (lower is better) Translates to: MVLLTLKIRNSF*LGKICVPISQL Trigger: CAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGGAGCACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR GCA 72 bp | GGGCAAACAAAACAGAGTATTGTTCTAACTTTTCACTaGACATCTCCCATCAATGCTGGACGTATCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GQTKQSIVLTFH*TSPINAGRIFL Trigger: GAGGAAGATACGTCCAGCATTGATGGGAGATGTGCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| 3UTR GCA 72 bp | TTTATTTTGACAAATCAATGGAAGTTAGAGGGCATATaGCAGTTGTCACTGGTAGCGAGGGAAAGTGACAGG | + |
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Preference number: 3 (lower is better) Translates to: FILTNQWKLEGI*QLSLVARESDR Trigger: CCTGTCACTTTCCCTCGCTACCAGTGACAACTGGCATATGCCCTCTAACTTCCATTGATTTGTCAAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| 3UTR-3UTR CAA 90 bp | GAAACAGCTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTAAGTATGGGGTGTTATaGATAGCAATCAGAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: ETASDWARYVSQSHNCHLKYGVL*IAIRIR Trigger: TCTGATTCTGATTGCTATCAATAACACCCCATACTT...AAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR TCA 72 bp | CTATTGCTCAGATATCAAATGGTTACACATGTCCAATaGCACGTCTCTCAGTCTGCAGAAGTGGCAAAACAT | + |
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Preference number: 3 (lower is better) Translates to: LLLRYQMVTHVQ*HVSQSAEVAKH Trigger: ATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAACCATTTGATATCTGAGCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGTATGGGGTGTTATaGATAGCAATCAGAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: MCPNLTTATFELQVKVCSKYGVL*IAIRIR Trigger: TCTGATTCTGATTGCTATCAATAACACCCCATACTT...TGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| 3UTR TCA 72 bp | TATGAAGTGAGACAAACCTCCGTGTGTTCAATTTGGTaGAGTGTTTGTCTTATTCTGGAAATGACATCCCTA | + |
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Preference number: 3 (lower is better) Translates to: YEVRQTSVCSIW*SVCLILEMTSL Trigger: TAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGTCTCACTTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
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| 3UTR GCA 72 bp | ACACCAATTTTAATTACAGTGATTTACATCGTGATCTaGGACTATGGGGATATGAGCTTCCAACTTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TPILITVIYIVI*DYGDMSFQLSL Trigger: CAGAGAAAGTTGGAAGCTCATATCCCCATAGTCGCAGATCACGATGTAAATCACTGTAATTAAAATTGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR TCA 72 bp | GATAATTCTCTAAGATCCTGTGACAGCTTGGTAGAATaGACTGCTTTATACTTGAACCATGAATTGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: DNSLRSCDSLVE*TALYLNHELLS Trigger: TGACAGCAATTCATGGTTCAAGTATAAAGCAGTTCATTCTACCAAGCTGTCACAGGATCTTAGAGAATTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| 3UTR CCA 72 bp | TTTAATTACAGTGATTTACATCGTGATCTGCGACTATaGGGATATGAGCTTCCAACTTTCTCTGACACTTTT | + |
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Preference number: 3 (lower is better) Translates to: FNYSDLHRDLRL*GYELPTFSDTF Trigger: AAAAGTGTCAGAGAAAGTTGGAAGCTCATATCCCCATAGTCGCAGATCACGATGTAAATCACTGTAATTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| 3UTR CCA 72 bp | TTTATTAAACTGAGACACTATTGCTCAGATATCAAATaGTTACACATGTCCAATGACACGTCTCTCAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: FIKLRHYCSDIK*LHMSNDTSLSL Trigger: CAGACTGAGAGACGTGTCATTGGACATGTGTAACCATTTGATATCTGAGCAATAGTGTCTCAGTTTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS-3UTR TCA 90 bp | ATCCATCTGGAGAACACCTCCTACCACCAGCCATCAACCCCACTTCCCGGCTCTCCAAACATGAGGTTCTaGGGTACATCGAGACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: IHLENTSYHQPSTPLPGSPNMRF*GTSRRQ Trigger: TTGCCGTCTCGATGTACCTCAGAACCTCATGTTTGG...AGAGCCGGGAAGTGGGGTTGATGGCTGGTGGTAGGAGGTGTTCTCCAGATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATGGGCAAGAGCTCTGAGCCAGTCATGCTGCTGTCTAGGTTCTAACAGCGAACTCCTCAGGAGGTaGGTTGCCATTCCCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: CSWARALSQSCCCLGSNSELLRR*VAIPQT Trigger: TGTTTGGGGAATGGCAACCCACCTCCTGAGGAGTTC...GCTGTTAGAACCTAGACAGCAGCATGACTGGCTCAGAGCTCTTGCCCATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS-3UTR TCA 90 bp | TACATCGTGATCTGCGACTATGGGGATATGAGCTTCCAACTTTCTCTGACACTTATCCAAGGCCTGGTCTaGGGACCGCGGCGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: YIVICDYGDMSFQLSLTLIQGLV*GPRRRS Trigger: TGATCTCCGCCGCGGTCCTCAGACCAGGCCTTGGAT...AAGTGTCAGAGAAAGTTGGAAGCTCATATCCCCATAGTCGCAGATCACGATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS-3UTR CCA 90 bp | ATCTGGAGAACACCTCCTACCACCAGCCATCAACCCCACTTCCCGGCTCTACTGGAATGCAATAAATACTaGGGACCCATCGGGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: IWRTPPTTSHQPHFPALLECNKY*GPIGLF Trigger: GAAAAGCCCGATGGGTCCCCAGTATTTATTGCATTC...CAGTAGAGCCGGGAAGTGGGGTTGATGGCTGGTGGTAGGAGGTGTTCTCCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTCTTGTAAACATCTGCTCATGGGCAAGAGCTCTGAGCCAGTCATGCTGCCCAAACATGAGGTTCTaGGGTACATCGAGACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SSLVNICSWARALSQSCCPNMRF*GTSRRQ Trigger: TTGCCGTCTCGATGTACCTCAGAACCTCATGTTTGG...GCAGCATGACTGGCTCAGAGCTCTTGCCCATGAGCAGATGTTTACAAGAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS-3UTR CCA 90 bp | CGGTGCAGTGGGATCCCAGAAACGAAGCCTCCACCTGAAAGAGCAAAGTTTAAATGGAAAAGGAAGGGCTaGACCGGAGCCGGATGTTAT | + |
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Preference number: 4 (lower is better) Translates to: RCSGIPETKPPPERAKFKWKRKG*TGAGCY Trigger: ATAACATCCGGCTCCGGTCCAGCCCTTCCTTTTCCA...TTTAAACTTTGCTCTTTCAGGTGGAGGCTTCGTTTCTGGGATCCCACTGCACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS-3UTR TCA 90 bp | GGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAATGCAGATATTGTGCATaGCACAGGCAGGGTATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQDMCPNLTTATFELQVKCRYCA*HRQGIA Trigger: GGCGATACCCTGCCTGTGTCATGCACAATATCTGCA...TTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGACTAGGAGTAAACGCTCTCCCGATGCCTTGTTCCTTCTTTCTGCAAACAAGTCCCCTGTGGCATTaGGTCTCACATCTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLGVNALPMPCSFFLQTSPLWH*VSHLSV Trigger: CACTGACAGATGTGAGACGCAATGCCACAGGGGACT...TGTTTGCAGAAAGAAGGAACAAGGCATCGGGAGAGCGTTTACTCCTAGTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCAAGGCCTGGTCTaGGGACCGCGGCGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDIQGLV*GPRRRS Trigger: TGATCTCCGCCGCGGTCCTCAGACCAGGCCTTGGAT...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | GCAAACAAAACAGAGTATTGTTCTAACTTTTCACTGCACATCTCCCATCAATGCATCCAAGGCCTGGTCTaGGGACCGCGGCGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ANKTEYCSNFSLHISHQCIQGLV*GPRRRS Trigger: TGATCTCCGCCGCGGTCCTCAGACCAGGCCTTGGAT...GCATTGATGGGAGATGTGCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGCTCCATATGCTGAGTTaGCAGTGTACCATCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKICVPISQLPPLSFRSKLHMLS*QCTIQG Trigger: GCCTTGGATGGTACACTGTCAACTCAGCATATGGAG...CTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | GTAGGACTAGGAGTAAACGCTCTCCCGATGCCTTGTTCCTTCTTTCTGCAAACATCTCCTTCCACAGGTTaGAGCACTTTGCCATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLGVNALPMPCSFFLQTSPSTG*STLPFL Trigger: CAGGAATGGCAAAGTGCTGCAACCTGTGGAAGGAGA...TGTTTGCAGAAAGAAGGAACAAGGCATCGGGAGAGCGTTTACTCCTAGTCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| 3UTR CAA 72 bp | AGCCAGTCATGCTGCTGTCTAGGTTCTAACAGCTGTTaGTGGACTCAGTTACCATTGCAAGTGGACGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SQSCCCLGSNSC*WTQLPLQVDAL Trigger: TAAGGCGTCCACTTGCAATGGTAACTGAGTCCACAAACAGCTGTTAGAACCTAGACAGCAGCATGACTGGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | TTGACAAATCAATGGAAGTTAGAGGGCATATGCCAGTTGTCACTGGTAGCGAGGGGTGTCTCCATATGCTaGGTTGACAGTGTACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LTNQWKLEGICQLSLVARGVSIC*VDSVPS Trigger: GGATGGTACACTGTCAACTCAGCATATGGAGACACC...CCTCGCTACCAGTGACAACTGGCATATGCCCTCTAACTTCCATTGATTTGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCACCATTCCCCAAACACTaGAGGGTGATGTTGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MCPNLTTATFELQVKVCSPFPKH*RVMLSP Trigger: AGGGGACAACATCACCCTTCAGTGTTTGGGGAATGG...TGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | GTAGGACTAGGAGTAAACGCTCTCCCGATGCCTTGTTCCTTCTTTCTGCAAACACTGGTAAGTAAAACATaGACTCCTCAGGAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLGVNALPMPCSFFLQTLVSKT*TPQEVG Trigger: ACCCACCTCCTGAGGAGTTCATGTTTTACTTACCAG...TGTTTGCAGAAAGAAGGAACAAGGCATCGGGAGAGCGTTTACTCCTAGTCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCACCTCAGGAGGTGGGTTaGCATTCCCCAAACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MCPNLTTATFELQVKVCSPQEVG*HSPNTE Trigger: TTCAGTGTTTGGGGAATGGCAACCCACCTCCTGAGG...TGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | TACATCGTGATCTGCGACTATGGGGATATGAGCTTCCAACTTTCTCTGACACTTGGTGTCTCCATATGCTaGGTTGACAGTGTACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YIVICDYGDMSFQLSLTLGVSIC*VDSVPS Trigger: GGATGGTACACTGTCAACTCAGCATATGGAGACACC...AAGTGTCAGAGAAAGTTGGAAGCTCATATCCCCATAGTCGCAGATCACGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CCA 90 bp | AAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATTGGAAAAGGAAGGGCTaGACCGGAGCCGGATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KICVPISQLPPLSFRSKYWKRKG*TGAGCY Trigger: ATAACATCCGGCTCCGGTCCAGCCCTTCCTTTTCCA...ATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTGGTCCAATGTATAGCTaGCTTTGGAAACCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETASDWARYVSQSHNCHLGPMYS*LWKPFH Trigger: GTGGAAGGGTTTCCAAAGCCAGCTATACATTGGACC...AAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| 3UTR CAA 72 bp | AGATTAAGAGCTCTAGAAAGTGCCTGTGAAGAGGCATaGCAGAGACTCAAGCATCCATCTGGAGAACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLRALESACEEA*QRLKHPSGEHL Trigger: GAGGTGTTCTCCAGATGGATGCTTGAGTCTCTGCAATGCCTCTTCACAGGCACTTTCTAGAGCTCTTAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
||
| 3UTR CAA 72 bp | TTGACAAATCAATGGAAGTTAGAGGGCATATGCCAGTaGTCACTGGTAGCGAGGGAAAGTGACAGGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTNQWKLEGICQ*SLVARESDRAN Trigger: GTTTGCCCTGTCACTTTCCCTCGCTACCAGTGACAACTGGCATATGCCCTCTAACTTCCATTGATTTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
||
| CDS-3UTR TCA 90 bp | GAAACAGCTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTCCATTTGCCAAACATaGGGTTCTGAGGTACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ETASDWARYVSQSHNCHLSICQT*GSEVHR Trigger: TCGATGTACCTCAGAACCTCATGTTTGGCAAATGGA...AAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCCCATTCCCCAAACACTaGAGGGTGATGTTGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSPFPKH*RVMLSP Trigger: AGGGGACAACATCACCCTTCAGTGTTTGGGGAATGG...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTGTTCCTTTTGTCAATaGGTGAGCATTTGTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKICVPISQLPPLSFRSKCSFCQ*VSICSP Trigger: GGGACTACAAATGCTCACTCATTGACAAAAGGAACA...CTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | AAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATTCTCCTTCCACAGGTTaGAGCACTTTGCCATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KICVPISQLPPLSFRSKYSPSTG*STLPFL Trigger: CAGGAATGGCAAAGTGCTGCAACCTGTGGAAGGAGA...ATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR GCA 90 bp | GAAACAGCTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGTTTGAGCTTCTTATaGCTTCAGGCTGTCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETASDWARYVSQSHNCHLCLSFL*LQAVLV Trigger: TACCAGGACAGCCTGAAGGCATAAGAAGCTCAAACA...AAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGAGTCCCCTGTGGCATTaGGTCTCACATCTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRSPLWH*VSHLSV Trigger: CACTGACAGATGTGAGACGCAATGCCACAGGGGACT...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCGAACTCCTCAGGAGGTaGGTTGCCATTCCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSELLRR*VAIPQT Trigger: TGTTTGGGGAATGGCAACCCACCTCCTGAGGAGTTC...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCAAAGTTTAAAGTCTAGTCGCAAGTCGCTACTGGCCCTTATCCAGTCTATTTGTAGTCCCCTGTaGCATTGCGTCTCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEQSLKSSRKSLLALIQSICSPL*HCVSHL Trigger: CAGATGTGAGACGCAATGCCACAGGGGACTACAAAT...AGACTGGATAAGGGCCAGTAGCGACTTGCGACTAGACTTTAAACTTTGCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| 3UTR CAA 72 bp | AAATTGTCAGTTTGGGAGTACCATTCTCAAGTAGTGTaGCTGTATGTGTTTGTGACTCGCTTCGGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSVWEYHSQVV*LYVFVTRFGEP Trigger: AGGCTCCCCGAAGCGAGTCACAAACACATACAGCAACACTACTTGAGAATGGTACTCCCAAACTGACAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCGGTGTCTCCATATGCTaGGTTGACAGTGTACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSGVSIC*VDSVPS Trigger: GGATGGTACACTGTCAACTCAGCATATGGAGACACC...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGCCAAACATGAGGTTCTaGGGTACATCGAGACGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRPNMRF*GTSRRQ Trigger: TTGCCGTCTCGATGTACCTCAGAACCTCATGTTTGG...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | GGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGCCTAACTTTTTCAGCTaGTCTGTTTCAAGAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GKICVPISQLPPLSFRSKPNFFS*SVSRKG Trigger: ACCCTTTCTTGAAACAGATCAGCTGAAAAAGTTAGG...CTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | CTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTATGTCACAGAACAGGTaGATGGCATTTGTATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLIGQDMCPNLTTATFELMSQNR*MAFVCQ Trigger: CTGACATACAAATGCCATTCACCTGTTCTGTGACAT...AAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR TCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACCCAAGTAGTGAACTGTaGTGGTCGTTGAAGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDPSSEL*WSLKPP Trigger: TGGCGGCTTCAACGACCATCACAGTTCACTACTTGG...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCTGCAGATATTGTGCATaGCACAGGCAGGGTATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDICRYCA*HRQGIA Trigger: GGCGATACCCTGCCTGTGTCATGCACAATATCTGCA...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTCAGGAGGTGGGTTaGCATTCCCCAAACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDIPQEVG*HSPNTE Trigger: TTCAGTGTTTGGGGAATGGCAACCCACCTCCTGAGG...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAGAATGCAATAAATACTaGGGACCCATCGGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MCPNLTTATFELQVKVCSECNKY*GPIGLF Trigger: GAAAAGCCCGATGGGTCCCCAGTATTTATTGCATTC...TGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACTGGAAAAGGAAGGGCTaGACCGGAGCCGGATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDWKRKG*TGAGCY Trigger: ATAACATCCGGCTCCGGTCCAGCCCTTCCTTTTCCA...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | TCCTATGGTGCTCCTAACTCTCAAGATAAGAAACAGCTTCTGATTGGGCAAGATGGTCCAATGTATAGCTaGCTTTGGAAACCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYGAPNSQDKKQLLIGQDGPMYS*LWKPFH Trigger: GTGGAAGGGTTTCCAAAGCCAGCTATACATTGGACC...ATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGGAGCACCATAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CCA 90 bp | ATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTCCCAACCTCCAACACTGTTCTCTCCAGTTaGTTTTCTGCTGTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MTRLSVCRSGKTLFPTSNTVLSS*FSAVQV Trigger: AACTTGCACAGCAGAAAACCAACTGGAGAGAACAGT...GTTGGAGGTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTACTGTTCTCTCCAGTTaGTTTTCTGCTGTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETASDWARYVSQSHNCHLTVLSS*FSAVQV Trigger: AACTTGCACAGCAGAAAACCAACTGGAGAGAACAGT...AAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CCA 90 bp | TCCTATGGTGCTCCTAACTCTCAAGATAAGAAACAGCTTCTGATTGGGCAAGATTGCCTCATCGTGCTCTaGAATACTTATCGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SYGAPNSQDKKQLLIGQDCLIVL*NTYRRD Trigger: GTCTCTGCGATAAGTATTCCAGAGCACGATGAGGCA...ATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGGAGCACCATAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CCA 90 bp | AAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATTGCCTCATCGTGCTCTaGAATACTTATCGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KICVPISQLPPLSFRSKYCLIVL*NTYRRD Trigger: GTCTCTGCGATAAGTATTCCAGAGCACGATGAGGCA...ATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR TCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACCTCCATATGCTGAGTTaGCAGTGTACCATCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDLHMLS*QCTIQG Trigger: GCCTTGGATGGTACACTGTCAACTCAGCATATGGAG...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | CCTAACTCTCAAGATAAGAAACAGCTTCTGATTGGGCAAGATATGTGTCCCAATCATTCCTGTACCATGTaGTGTTGCCATCTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PNSQDKKQLLIGQDMCPNHSCTM*CCHLGN Trigger: GTTACCCAGATGGCAACATCACATGGTACAGGAATG...ATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR TCA 90 bp | TACATCGTGATCTGCGACTATGGGGATATGAGCTTCCAACTTTCTCTGACACTTATGTCACAGAACAGGTaGATGGCATTTGTATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YIVICDYGDMSFQLSLTLMSQNR*MAFVCQ Trigger: CTGACATACAAATGCCATTCACCTGTTCTGTGACAT...AAGTGTCAGAGAAAGTTGGAAGCTCATATCCCCATAGTCGCAGATCACGATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGCTGGTAAGTAAAACATaGACTCCTCAGGAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRLVSKT*TPQEVG Trigger: ACCCACCTCCTGAGGAGTTCATGTTTTACTTACCAG...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTGGGACATCATCATACTaGACACTTTTCTTCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLIGQDMCPNLTTATFELGTSSY*TLFFVE Trigger: TTCTACGAAGAAAAGTGTGCAGTATGATGATGTCCC...AAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | TCCTATGGTGCTCCTAACTCTCAAGATAAGAAACAGCTTCTGATTGGGCAAGATCCTCGGTCACTAGCATaGACACAAATCTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SYGAPNSQDKKQLLIGQDPRSLA*TQISSH Trigger: ATGAGAAGAGATTTGTGTGCATGCTAGTGACCGAGG...ATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGGAGCACCATAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCTCTCCTTCCACAGGTTaGAGCACTTTGCCATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDISPSTG*STLPFL Trigger: CAGGAATGGCAAAGTGCTGCAACCTGTGGAAGGAGA...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCATACTTGCAGATATTGTaGATGACACAGGCAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MCPNLTTATFELQVKVCSYLQIL*MTQAGY Trigger: ATACCCTGCCTGTGTCATGCACAATATCTGCAAGTA...TGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR GCA 90 bp | TTACACATGTCCAATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTTCGTCTGCCTCATCGTaGTCTGGAATACTTATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHMSNDTSLSLQKWQNIISSASS*SGILIA Trigger: TGCGATAAGTATTCCAGAGCACGATGAGGCAGACGA...AATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCATTTGTAGTCCCCTGTaGCATTGCGTCTCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSICSPL*HCVSHL Trigger: CAGATGTGAGACGCAATGCCACAGGGGACTACAAAT...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCTGCCTCATCGTGCTCTaGAATACTTATCGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSCLIVL*NTYRRD Trigger: GTCTCTGCGATAAGTATTCCAGAGCACGATGAGGCA...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| 3UTR CAA 72 bp | GAGACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTaGTCTTATTCTGGAAATGACATCCCTAGCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETNLRVFNLVKC*SYSGNDIPSRS Trigger: ACTCCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCATTCCTGTACCATGTaGTGTTGCCATCTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDIHSCTM*CCHLGN Trigger: GTTACCCAGATGGCAACATCACATGGTACAGGAATG...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGAACCGTACCCATTCCTGTACCATGTaGTGTTGCCATCTGGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSKKVWGVIDSNQNQNRTHSCTM*CCHLGN Trigger: GTTACCCAGATGGCAACATCACATGGTACAGGAATG...GGTACGGTTCTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCCAGTGTGTAAGTGTTTaGGCTTCTTATGCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSQCVSV*ASYAFR Trigger: CCTGAAGGCATAAGAAGCTCAAACACTTACACACTG...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | TTATCTCAAGGTGCATTCAATATCTGTAGCGTAGTTAACAAAAACACACACGAACCAAGTAGTGAACTGTaGTGGTCGTTGAAGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQGAFNICSVVNKNTHEPSSEL*WSLKPP Trigger: TGGCGGCTTCAACGACCATCACAGTTCACTACTTGG...TTCGTGTGTGTTTTTGTTAACTACGCTACAGATATTGAATGCACCTTGAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR TCA 90 bp | GTCAAAGTATGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGTGCAGATATTGTGCATaGCACAGGCAGGGTATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKVCSKKVWGVIDSNQNQCRYCA*HRQGIA Trigger: GGCGATACCCTGCCTGTGTCATGCACAATATCTGCA...CTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACATACTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGTGTTTGAGCTTCTTATaGCTTCAGGCTGTCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRCLSFL*LQAVLV Trigger: TACCAGGACAGCCTGAAGGCATAAGAAGCTCAAACA...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACTCGTCTGCCTCATCGTaGTCTGGAATACTTATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDSSASS*SGILIA Trigger: TGCGATAAGTATTCCAGAGCACGATGAGGCAGACGA...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | ATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTCCCAACCTCCAACAATTTCAGGTTTAGATaGTTGCTTGAACACCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MTRLSVCRSGKTLFPTSNNFRFR*LLEHLD Trigger: GTCAAGGTGTTCAAGCAACCATCTAAACCTGAAATT...GTTGGAGGTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCAAAGTTTAAAGTCTAGTCGCAAGTCGCTACTGGCCCTTATCCAGTCTCACAGAACAGGTGAATaGCATTTGTATGTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KEQSLKSSRKSLLALIQSHRTGE*HLYVRS Trigger: AGATCTGACATACAAATGCCATTCACCTGTTCTGTG...AGACTGGATAAGGGCCAGTAGCGACTTGCGACTAGACTTTAAACTTTGCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCGGTCCAATGTATAGCTaGCTTTGGAAACCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDIGPMYS*LWKPFH Trigger: GTGGAAGGGTTTCCAAAGCCAGCTATACATTGGACC...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAGTTTTGATGCAGTTTTaGACTTCTTCATGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MCPNLTTATFELQVKVCSVLMQF*TSSCTA Trigger: GGCTGTACATGAAGAAGTCCAAAACTGCATCAAAAC...TGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR TCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCTCCATTTGCCAAACATaGGGTTCTGAGGTACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDISICQT*GSEVHR Trigger: TCGATGTACCTCAGAACCTCATGTTTGGCAAATGGA...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | GCAAACAAAACAGAGTATTGTTCTAACTTTTCACTGCACATCTCCCATCAATGCTCCATTTGCCAAACATaGGGTTCTGAGGTACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ANKTEYCSNFSLHISHQCSICQT*GSEVHR Trigger: TCGATGTACCTCAGAACCTCATGTTTGGCAAATGGA...GCATTGATGGGAGATGTGCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
||
| CDS-3UTR TCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCATGTCACAGAACAGGTaGATGGCATTTGTATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSMSQNR*MAFVCQ Trigger: CTGACATACAAATGCCATTCACCTGTTCTGTGACAT...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGTGTTCCTTTTGTCAATaGGTGAGCATTTGTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRCSFCQ*VSICSP Trigger: GGGACTACAAATGCTCACTCATTGACAAAAGGAACA...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGGAAAGTGACAGGGCAAACAAAACAGAGTATTGTTCTAACTTTTCACTGCGGGACATCATCATACTaGACACTTTTCTTCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGKVTGQTKQSIVLTFHCGTSSY*TLFFVE Trigger: TTCTACGAAGAAAAGTGTGCAGTATGATGATGTCCC...GCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGCCCTGTCACTTTCCCTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
||
| CDS-3UTR GCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACCCTCGGTCACTAGCATaGACACAAATCTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDPRSLA*TQISSH Trigger: ATGAGAAGAGATTTGTGTGCATGCTAGTGACCGAGG...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCTACTTGCAGATATTGTaGATGACACAGGCAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSYLQIL*MTQAGY Trigger: ATACCCTGCCTGTGTCATGCACAATATCTGCAAGTA...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACGAATGCAATAAATACTaGGGACCCATCGGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDECNKY*GPIGLF Trigger: GAAAAGCCCGATGGGTCCCCAGTATTTATTGCATTC...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | CCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGCACAGAACAGGTGAATaGCATTTGTATGTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PISQLPPLSFRSKYVQRKHRTGE*HLYVRS Trigger: AGATCTGACATACAAATGCCATTCACCTGTTCTGTG...CTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCACTGTTCTCTCCAGTTaGTTTTCTGCTGTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSTVLSS*FSAVQV Trigger: AACTTGCACAGCAGAAAACCAACTGGAGAGAACAGT...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGCCTAACTTTTTCAGCTaGTCTGTTTCAAGAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRPNFFS*SVSRKG Trigger: ACCCTTTCTTGAAACAGATCAGCTGAAAAAGTTAGG...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGTATGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGTCGTCTGCCTCATCGTaGTCTGGAATACTTATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKVCSKKVWGVIDSNQNQSSASS*SGILIA Trigger: TGCGATAAGTATTCCAGAGCACGATGAGGCAGACGA...CTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACATACTTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCTTTGTATGTCAGATCTaGTTGTCTTGTACTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSFVCQI*LSCTPR Trigger: CCTTGGAGTACAAGACAACCAGATCTGACATACAAA...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGCACAGAACAGGTGAATaGCATTTGTATGTCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRHRTGE*HLYVRS Trigger: AGATCTGACATACAAATGCCATTCACCTGTTCTGTG...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR TCA 90 bp | TTATCTCAAGGTGCATTCAATATCTGTAGCGTAGTTAACAAAAACACACACGAACAGTGTGTAAGTGTTTaGGCTTCTTATGCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSQGAFNICSVVNKNTHEQCVSV*ASYAFR Trigger: CCTGAAGGCATAAGAAGCTCAAACACTTACACACTG...TTCGTGTGTGTTTTTGTTAACTACGCTACAGATATTGAATGCACCTTGAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCGGGACATCATCATACTaGACACTTTTCTTCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDIGTSSY*TLFFVE Trigger: TTCTACGAAGAAAAGTGTGCAGTATGATGATGTCCC...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | CCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGGTTGGTTTTCTGCTGTaGAAGTTAATGTTACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PISQLPPLSFRSKYVQRKVGFLL*KLMLHS Trigger: AGAATGTAACATTAACTTGCACAGCAGAAAACCAAC...CTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR GCA 90 bp | TCCTATGGTGCTCCTAACTCTCAAGATAAGAAACAGCTTCTGATTGGGCAAGATGTTGGTTTTCTGCTGTaGAAGTTAATGTTACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYGAPNSQDKKQLLIGQDVGFLL*KLMLHS Trigger: AGAATGTAACATTAACTTGCACAGCAGAAAACCAAC...ATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGGAGCACCATAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR GCA 90 bp | TTACACATGTCCAATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTAACTGTCTCTTGAAATaGAGTCACCTAACTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHMSNDTSLSLQKWQNIINCLLK*SHLTFS Trigger: TGAAAAAGTTAGGTGACTGCATTTCAAGAGACAGTT...AATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR GCA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGAACTGTCTCTTGAAATaGAGTCACCTAACTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRNCLLK*SHLTFS Trigger: TGAAAAAGTTAGGTGACTGCATTTCAAGAGACAGTT...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCAATTTCAGGTTTAGATaGTTGCTTGAACACCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDINFRFR*LLEHLD Trigger: GTCAAGGTGTTCAAGCAACCATCTAAACCTGAAATT...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACTGTTTCAAGAAAGGGTaGTTTGTTTACAATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDCFKKG*FVYNFR Trigger: CCTGAAATTGTAAACAAAGCACCCTTTCTTGAAACA...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR GCA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCGTTGGTTTTCTGCTGTaGAAGTTAATGTTACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLRVFNLVKCLSYSGNDIVGFLL*KLMLHS Trigger: AGAATGTAACATTAACTTGCACAGCAGAAAACCAAC...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATAAACTGAATGTCGTAACCAGGCAAAACAAAGAACTTTGGTTTGGTTTTTTTGTATGTCAGATCTaGTTGTCTTGTACTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDKLNVVTRQNKELWFGFFVCQI*LSCTPR Trigger: CCTTGGAGTACAAGACAACCAGATCTGACATACAAA...AAAACCAAACCAAAGTTCTTTGTTTTGCCTGGTTACGACATTCAGTTTATCTGT 37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGTATGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGTTTGTATGTCAGATCTaGTTGTCTTGTACTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKVCSKKVWGVIDSNQNQFVCQI*LSCTPR Trigger: CCTTGGAGTACAAGACAACCAGATCTGACATACAAA...CTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACATACTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGTATGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGGTTTTGATGCAGTTTTaGACTTCTTCATGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKVCSKKVWGVIDSNQNQVLMQF*TSSCTA Trigger: GGCTGTACATGAAGAAGTCCAAAACTGCATCAAAAC...CTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACATACTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATAAACTGAATGTCGTAACCAGGCAAAACAAAGAACTTTGGTTTGGTTTTTGTTTCAAGAAAGGGTaGTTTGTTTACAATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDKLNVVTRQNKELWFGFCFKKG*FVYNFR Trigger: CCTGAAATTGTAAACAAAGCACCCTTTCTTGAAACA...AAAACCAAACCAAAGTTCTTTGTTTTGCCTGGTTACGACATTCAGTTTATCTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS TCA 90 bp | AGGTACATCGAGACGGCAAGGCATGACAATGGTGTCTCCATATGCTaGGTTGACAGTGTACCATCCAAGGCCTGGTCTGAGGACCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RYIETARHDNGVSIC*VDSVPSKAWSEDRG Trigger: GCCGCGGTCCTCAGACCAGGCCTTGGATGGTACACTGTCAACTCAGCATATGGAGACACCATTGTCATGCCTTGCCGTCTCGATGTACCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000168071.2 ENSMUST00000170035.8 |
||
| CDS TCA 90 bp | CTTCATCCACACCACAGTCGCGTTCCTACTTGCAGATATTGTGCATaGCACAGGCAGGGTATCGCCAATCTGCTTGGTCACCTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LHPHHSRVPTCRYCA*HRQGIANLLGHLPT Trigger: AGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGAACGCGACTGTGGTGTGGATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
||
| CDS GCA 90 bp | TATCCTTCATCCACACCACAGTCGCGTTCCTACTTGCAGATATTGTaGATGACACAGGCAGGGTATCGCCAATCTGCTTGGTCACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YPSSTPQSRSYLQIL*MTQAGYRQSAWSPP Trigger: GGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGAACGCGACTGTGGTGTGGATGAAGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
||
| CDS CCA 90 bp | CATAGTTCCCAGCATCCTGATAATGAAGACTGGAAAAGGAAGGGCTaGACCGGAGCCGGATGTTATCCTTCATCCACACCACAGTCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSQHPDNEDWKRKG*TGAGCYPSSTPQSR Trigger: ACGCGACTGTGGTGTGGATGAAGGATAACATCCGGCTCCGGTCCAGCCCTTCCTTTTCCAGTCTTCATTATCAGGATGCTGGGAACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
||
| CDS-3UTR CAA 90 bp | CGGTGCAGTGGGATCCCAGAAACGAAGCCTCCACCTGAAAGAGCAAAGTTTAAATCCTACTTGCAGATATaGTGCATGACACAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RCSGIPETKPPPERAKFKSYLQI*CMTQAG Trigger: CCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGA...TTTAAACTTTGCTCTTTCAGGTGGAGGCTTCGTTTCTGGGATCCCACTGCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | CGGTGCAGTGGGATCCCAGAAACGAAGCCTCCACCTGAAAGAGCAAAGTTTAAATCTCCATATGCTGAGTaGACAGTGTACCATCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCSGIPETKPPPERAKFKSPYAE*TVYHPR Trigger: CCTTGGATGGTACACTGTCAACTCAGCATATGGAGA...TTTAAACTTTGCTCTTTCAGGTGGAGGCTTCGTTTCTGGGATCCCACTGCACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | CTTCTGATTGGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCTCTCCTTCCACAGGTaGCAGCACTTTGCCATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLIGQDMCPNLTTATFELLSFHR*QHFAIP Trigger: AGGAATGGCAAAGTGCTGCAACCTGTGGAAGGAGAG...AAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCCAATCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS CCA 90 bp | TATGACGCTCCCACTGCCGGTAATGGTCCAATGTATAGCTGGCTTTaGAAACCCTTCCACGTGGCAGATTATAGTTTTAGACAGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: YDAPTAGNGPMYSWL*KPFHVADYSFRQST Trigger: AGTGGACTGTCTAAAACTATAATCTGCCACGTGGAAGGGTTTCCAAAGCCAGCTATACATTGGACCATTACCGGCAGTGGGAGCGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
||
| CDS TCA 90 bp | GACCCATCGGGCTTTTCATATTTCCATTTGCCAAACATGAGGTTCTaGGGTACATCGAGACGGCAAGGCATGACAATGGTGTCTCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: DPSGFSYFHLPNMRF*GTSRRQGMTMVSPY Trigger: ATATGGAGACACCATTGTCATGCCTTGCCGTCTCGATGTACCTCAGAACCTCATGTTTGGCAAATGGAAATATGAAAAGCCCGATGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000168071.2 ENSMUST00000170035.8 |
||
| CDS CCA 90 bp | TTGCAGATATTGTGCATGACACAGGCAGGGTATCGCCAATCTGCTTaGTCACCTCCCCACTTGGGTTTAAGGATAAATCCAAGTAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQILCMTQAGYRQSA*SPPHLGLRINPSSE Trigger: TTCACTACTTGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000170035.8 |
||
| CDS CCA 90 bp | TTGGTTTATGACGCTCCCACTGCCGGTAATGGTCCAATGTATAGCTaGCTTTGGAAACCCTTCCACGTGGCAGATTATAGTTTTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVYDAPTAGNGPMYS*LWKPFHVADYSFRQ Trigger: CTGTCTAAAACTATAATCTGCCACGTGGAAGGGTTTCCAAAGCCAGCTATACATTGGACCATTACCGGCAGTGGGAGCGTCATAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCAATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTCCCAACACAGGTTGCAGCACTTaGCCATTCCTGTACCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: MSNDTSLSLQKWQNIIPNTGCST*PFLYHV Trigger: CACATGGTACAGGAATGGCAAAGTGCTGCAACCTGT...GTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | CTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGTATGGCTCTCCTTCCACAGGTaGCAGCACTTTGCCATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTTATFELQVKVCSKKVWLSFHR*QHFAIP Trigger: AGGAATGGCAAAGTGCTGCAACCTGTGGAAGGAGAG...CCATACTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | ATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTCCCAACCTCCAACCTTGTTCGGAATAAATaGTTTTCTGGCCGGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MTRLSVCRSGKTLFPTSNLVRNK*FSGRRV Trigger: GACCCTCCGGCCAGAAAACAATTTATTCCGAACAAG...GTTGGAGGTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | ATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTCCCAACCTCCAACTTTTGGTGGCAGCACTaGTATTGTCACCTGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MTRLSVCRSGKTLFPTSNFWWQH*YCHLLC Trigger: ACAGAGCAGGTGACAATACAAGTGCTGCCACCAAAA...GTTGGAGGTTGGGAATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS CCA 90 bp | TGTTTTCTGGCCGGAGGGTCCATAATATGTCACAGAACAGGTGAATaGCATTTGTATGTCAGATCTGGTTGTCTTGTACTCCAAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFLAGGSIICHRTGE*HLYVRSGCLVLQGG Trigger: TCCTCCTTGGAGTACAAGACAACCAGATCTGACATACAAATGCCATTCACCTGTTCTGTGACATATTATGGACCCTCCGGCCAGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
||
| CDS CCA 90 bp | TTGCAGATATTGTGCATGACACAGGCAGGGTATCGCCAATCTGCTTaGTCACCTCCCCACTTGGGTTTAAGGATAAATCCAAGTAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQILCMTQAGYRQSA*SPPHLGLRINPSSK Trigger: TTTACTACTTGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCAAAGTTTAAAGTCTAGTCGCAAGTCGCTACTGGCCCTTATCCAGTCTGTATGTCAGATCTGGTaGTCTTGTACTCCAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEQSLKSSRKSLLALIQSVCQIW*SCTPRR Trigger: CCTCCTTGGAGTACAAGACAACCAGATCTGACATAC...AGACTGGATAAGGGCCAGTAGCGACTTGCGACTAGACTTTAAACTTTGCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAGCCGCCATGTTCCTTTaGTCAATGAGTGAGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: MCPNLTTATFELQVKVCSAAMFL*SMSEHL Trigger: CAAATGCTCACTCATTGACAAAAGGAACATGGCGGC...TGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | GGGCAAGATATGTGTCCCAATCTCACAACTGCCACCTTTGAGCTTCAGGTCAAATTCCCACAATCAGTTTaGCCTGGTCATTCACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GQDMCPNLTTATFELQVKFPQSV*PGHSPF Trigger: AAAAGGTGAATGACCAGGCAAAACTGATTGTGGGAA...TTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACATATCTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS GCA 90 bp | TCTGAGAGGCTCAGTCTGTCCTTGTACTCTGGGACATCATCATACTaGACACTTTTCTTCGTAGAAGATCGGAATGCAATAAATACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SERLSLSLYSGTSSY*TLFFVEDRNAINTG Trigger: CCCAGTATTTATTGCATTCCGATCTTCTACGAAGAAAAGTGTGCAGTATGATGATGTCCCAGAGTACAAGGACAGACTGAGCCTCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000168071.2 ENSMUST00000170035.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACCTCTCCTTCCACAGGTaGCAGCACTTTGCCATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDLSFHR*QHFAIP Trigger: AGGAATGGCAAAGTGCTGCAACCTGTGGAAGGAGAG...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGTCCTACTTGCAGATATaGTGCATGACACAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRSYLQI*CMTQAG Trigger: CCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGA...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS TCA 90 bp | AAATTGTTTTCTGGCCGGAGGGTCCATAATATGTCACAGAACAGGTaGATGGCATTTGTATGTCAGATCTGGTTGTCTTGTACTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLFSGRRVHNMSQNR*MAFVCQIWLSCTPR Trigger: CCTTGGAGTACAAGACAACCAGATCTGACATACAAATGCCATTCACCTGTTCTGTGACATATTATGGACCCTCCGGCCAGAAAACAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
||
| CDS-3UTR CAA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCACAGGTTGCAGCACTTaGCCATTCCTGTACCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLRVFNLVKCLSYSGNDITGCST*PFLYHV Trigger: CACATGGTACAGGAATGGCAAAGTGCTGCAACCTGT...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGAACCGTACCACAGGTTGCAGCACTTaGCCATTCCTGTACCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSKKVWGVIDSNQNQNRTTGCST*PFLYHV Trigger: CACATGGTACAGGAATGGCAAAGTGCTGCAACCTGT...GGTACGGTTCTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCGTATGTCAGATCTGGTaGTCTTGTACTCCAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSVCQIW*SCTPRR Trigger: CCTCCTTGGAGTACAAGACAACCAGATCTGACATAC...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCCTTGTTCGGAATAAATaGTTTTCTGGCCGGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVFNLVKCLSYSGNDIPSLVRNK*FSGRRV Trigger: GACCCTCCGGCCAGAAAACAATTTATTCCGAACAAG...GCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCAAAAAGGTCCCATGTACACTACCTCCTTAAAAAGTACCTCAGGCAGAAATGGTCACCTCCCCACTaGGGTTTAAGGATAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSKRSHVHYLLKKYLRQKWSPPH*GLRINP Trigger: TGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCA...TTTCTGCCTGAGGTACTTTTTAAGGAGGTAGTGTACATGGGACCTTTTTGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | GATAGCAATCAGAATCAGAACCGTACCTGCTCAGACTATCCATATAAACAATTGTCCTACTTGCAGATATaGTGCATGACACAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DSNQNQNRTCSDYPYKQLSYLQI*CMTQAG Trigger: CCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGA...CAATTGTTTATATGGATAGTCTGAGCAGGTACGGTTCTGATTCTGATTGCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACTCTCCATATGCTGAGTaGACAGTGTACCATCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDSPYAE*TVYHPR Trigger: CCTTGGATGGTACACTGTCAACTCAGCATATGGAGA...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCAAAAAGGTCCCATGTACACTACCTCCTTAAAAAGTACCTCAGGCAGAAAGGTTTAGATGGTTGCTaGAACACCTTGACTAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TSKRSHVHYLLKKYLRQKGLDGC*NTLTRV Trigger: TACCCTAGTCAAGGTGTTCAAGCAACCATCTAAACC...TTTCTGCCTGAGGTACTTTTTAAGGAGGTAGTGTACATGGGACCTTTTTGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGGGTTTAGATGGTTGCTaGAACACCTTGACTAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRGLDGC*NTLTRV Trigger: TACCCTAGTCAAGGTGTTCAAGCAACCATCTAAACC...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | CCTAACTCTCAAGATAAGAAACAGCTTCTGATTGGGCAAGATATGTGTCCCAATCTGGGTAACTGTCTCTaGAAATGCAGTCACCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: PNSQDKKQLLIGQDMCPNLGNCL*KCSHLT Trigger: AGTTAGGTGACTGCATTTCAAGAGACAGTTACCCAG...ATTGGGACACATATCTTGCCCAATCAGAAGCTGTTTCTTATCTTGAGAGTTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGCTGGGTAACTGTCTCTaGAAATGCAGTCACCTAACT | + |
|
Preference number: 5 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRLGNCL*KCSHLT Trigger: AGTTAGGTGACTGCATTTCAAGAGACAGTTACCCAG...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | GATAGCAATCAGAATCAGAACCGTACCTGCTCAGACTATCCATATAAACAATTGGTATGTCAGATCTGGTaGTCTTGTACTCCAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSNQNQNRTCSDYPYKQLVCQIW*SCTPRR Trigger: CCTCCTTGGAGTACAAGACAACCAGATCTGACATAC...CAATTGTTTATATGGATAGTCTGAGCAGGTACGGTTCTGATTCTGATTGCTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGTATGGACAGGTGAATGGCATTaGTATGTCAGATCTGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTTATFELQVKVCSKKVWTGEWH*YVRSGC Trigger: ACAACCAGATCTGACATACAAATGCCATTCACCTGT...CCATACTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCTTTTGGTGGCAGCACTaGTATTGTCACCTGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLRVFNLVKCLSYSGNDIFWWQH*YCHLLC Trigger: ACAGAGCAGGTGACAATACAAGTGCTGCCACCAAAA...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCGCCGCCATGTTCCTTTaGTCAATGAGTGAGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: NLRVFNLVKCLSYSGNDIAAMFL*SMSEHL Trigger: CAAATGCTCACTCATTGACAAAAGGAACATGGCGGC...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | ACAAACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACTGGTCACCTCCCCACTaGGGTTTAAGGATAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TNLRVFNLVKCLSYSGNDWSPPH*GLRINP Trigger: TGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCA...GTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
||
| CDS-3UTR CAA 90 bp | GATAGCAATCAGAATCAGAACCGTACCTGCTCAGACTATCCATATAAACAATTGTGGTCACCTCCCCACTaGGGTTTAAGGATAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSNQNQNRTCSDYPYKQLWSPPH*GLRINP Trigger: TGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCA...CAATTGTTTATATGGATAGTCTGAGCAGGTACGGTTCTGATTCTGATTGCTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | CTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGTATGGTTCCCACAATCAGTTTaGCCTGGTCATTCACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTTATFELQVKVCSKKVWFPQSV*PGHSPF Trigger: AAAAGGTGAATGACCAGGCAAAACTGATTGTGGGAA...CCATACTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTGACAGGGCAAACAAAACAGAGTATTGTTCTAACTTTTCACTGCACATCTTCTCCATATGCTGAGTaGACAGTGTACCATCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVTGQTKQSIVLTFHCTSSPYAE*TVYHPR Trigger: CCTTGGATGGTACACTGTCAACTCAGCATATGGAGA...AGATGTGCAGTGAAAAGTTAGAACAATACTCTGTTTTGTTTGCCCTGTCACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
||
| CDS-3UTR CAA 90 bp | TTACACATGTCCAATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTACAGGTGAATGGCATTaGTATGTCAGATCTGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHMSNDTSLSLQKWQNIITGEWH*YVRSGC Trigger: ACAACCAGATCTGACATACAAATGCCATTCACCTGT...AATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGACAGGTGAATGGCATTaGTATGTCAGATCTGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRTGEWH*YVRSGC Trigger: ACAACCAGATCTGACATACAAATGCCATTCACCTGT...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
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| CDS-3UTR CAA 90 bp | GTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCCCTAGCAGGTTCCCACAATCAGTTTaGCCTGGTCATTCACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: VFNLVKCLSYSGNDIPSRFPQSV*PGHSPF Trigger: AAAAGGTGAATGACCAGGCAAAACTGATTGTGGGAA...CCTGCTAGGGATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
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| CDS-3UTR CAA 90 bp | CTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGTATGGTGTTTTGATGCAGTTTaGGACTTCTTCATGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: LTTATFELQVKVCSKKVWCFDAV*DFFMYS Trigger: GCTGTACATGAAGAAGTCCAAAACTGCATCAAAACA...CCATACTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| CDS-3UTR CAA 90 bp | TACATCGTGATCTGCGACTATGGGGATATGAGCTTCCAACTTTCTCTGACACTTCCTTGTTTACATGTTTaGATGCAGTTTTGGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: YIVICDYGDMSFQLSLTLPCLHV*MQFWTS Trigger: AGAAGTCCAAAACTGCATCAAAACATGTAAACAAGG...AAGTGTCAGAGAAAGTTGGAAGCTCATATCCCCATAGTCGCAGATCACGATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS-3UTR CAA 90 bp | GTCAAAGTATGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGCTTGTTCGGAATAAATaGTTTTCTGGCCGGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VKVCSKKVWGVIDSNQNQLVRNK*FSGRRV Trigger: GACCCTCCGGCCAGAAAACAATTTATTCCGAACAAG...CTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACATACTTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| CDS-3UTR CAA 90 bp | AACCTCCGTGTGTTCAATTTGGTGAAGTGTTTGTCTTATTCTGGAAATGACATCTCAGTGTGTAAGTGTTaGAGCTTCTTATGCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: NLRVFNLVKCLSYSGNDISVCKC*SFLCLQ Trigger: CTGAAGGCATAAGAAGCTCAAACACTTACACACTGA...GATGTCATTTCCAGAATAAGACAAACACTTCACCAAATTGAACACACGGAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164728.8 |
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| CDS-3UTR CAA 90 bp | TTACACATGTCCAATGACACGTCTCTCAGTCTGCAGAAGTGGCAAAACATTATTTGTTTTGATGCAGTTTaGGACTTCTTCATGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: LHMSNDTSLSLQKWQNIICFDAV*DFFMYS Trigger: GCTGTACATGAAGAAGTCCAAAACTGCATCAAAACA...AATAATGTTTTGCCACTTCTGCAGACTGAGAGACGTGTCATTGGACATGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS-3UTR CAA 90 bp | CTCACAACTGCCACCTTTGAGCTTCAGGTCAAAGTATGTTCAAAGAAAGTATGGCCTTGTTTACATGTTTaGATGCAGTTTTGGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: LTTATFELQVKVCSKKVWPCLHV*MQFWTS Trigger: AGAAGTCCAAAACTGCATCAAAACATGTAAACAAGG...CCATACTTTCTTTGAACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| CDS-3UTR CAA 90 bp | GTCAAAGTATGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGCTGGGTAACTGTCTCTaGAAATGCAGTCACCTAACT | + |
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Preference number: 5 (lower is better) Translates to: VKVCSKKVWGVIDSNQNQLGNCL*KCSHLT Trigger: AGTTAGGTGACTGCATTTCAAGAGACAGTTACCCAG...CTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACATACTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023312.14 ENSMUST00000167115.8 |
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| CDS-3UTR CAA 90 bp | GTCAAAGTATGTTCAAAGAAAGTATGGGGTGTTATTGATAGCAATCAGAATCAGTCAGTGTGTAAGTGTTaGAGCTTCTTATGCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: VKVCSKKVWGVIDSNQNQSVCKC*SFLCLQ Trigger: CTGAAGGCATAAGAAGCTCAAACACTTACACACTGA...CTGATTCTGATTGCTATCAATAACACCCCATACTTTCTTTGAACATACTTTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023312.14 |
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| CDS TCA 72 bp | GAGACGGCAAGGCATGACAATGGTGTCTCCATATGCTaGGTTGACAGTGTACCATCCAAGGCCTGGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ETARHDNGVSIC*VDSVPSKAWSE Trigger: CTCAGACCAGGCCTTGGATGGTACACTGTCAACTCAGCATATGGAGACACCATTGTCATGCCTTGCCGTCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000168071.2 ENSMUST00000170035.8 |
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| CDS TCA 72 bp | CACCACAGTCGCGTTCCTACTTGCAGATATTGTGCATaGCACAGGCAGGGTATCGCCAATCTGCTTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: HHSRVPTCRYCA*HRQGIANLLGH Trigger: GTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGAACGCGACTGTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 90 bp | GGAGCCGGATGTTATCCTTCATCCACACCACAGTCGCGTTCCTACTaGCAGATATTGTGCATGACACAGGCAGGGTATCGCCAATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GAGCYPSSTPQSRSY*QILCMTQAGYRQSA Trigger: AGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGAACGCGACTGTGGTGTGGATGAAGGATAACATCCGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CCA 72 bp | CAGCATCCTGATAATGAAGACTGGAAAAGGAAGGGCTaGACCGGAGCCGGATGTTATCCTTCATCCACACCA | + |
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Preference number: 6 (lower is better) Translates to: QHPDNEDWKRKG*TGAGCYPSSTP Trigger: TGGTGTGGATGAAGGATAACATCCGGCTCCGGTCCAGCCCTTCCTTTTCCAGTCTTCATTATCAGGATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 72 bp | TCATCCACACCACAGTCGCGTTCCTACTTGCAGATATaGTGCATGACACAGGCAGGGTATCGCCAATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSTPQSRSYLQI*CMTQAGYRQSA Trigger: AGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGAACGCGACTGTGGTGTGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 90 bp | TGTTATCCTTCATCCACACCACAGTCGCGTTCCTACTTGCAGATATaGTGCATGACACAGGCAGGGTATCGCCAATCTGCTTGGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: CYPSSTPQSRSYLQI*CMTQAGYRQSAWSP Trigger: AGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATCTGCAAGTAGGAACGCGACTGTGGTGTGGATGAAGGATAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CCA 72 bp | TTGTGCATGACACAGGCAGGGTATCGCCAATCTGCTTaGTCACCTCCCCACTTGGGTTTAAGGATAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: LCMTQAGYRQSA*SPPHLGLRINP Trigger: TGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 72 bp | ATTGTGCATGACACAGGCAGGGTATCGCCAATCTGCTaGGTCACCTCCCCACTTGGGTTTAAGGATAAATCC | + |
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Preference number: 6 (lower is better) Translates to: IVHDTGRVSPIC*VTSPLGFKDKS Trigger: GGATTTATCCTTAAACCCAAGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 90 bp | CGAGGGCAGCGAGGAGGAGACCAACGACAATTCCCACAATCAGTTTaGCCTGGTCATTCACCTTTTCTCTGTTTTCATTCGCAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: RGQRGGDQRQFPQSV*PGHSPFLCFHSQRH Trigger: ATGTCTCTGCGAATGAAAACAGAGAAAAGGTGAATGACCAGGCAAAACTGATTGTGGGAATTGTCGTTGGTCTCCTCCTCGCTGCCCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170035.8 |
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| CDS GCA 72 bp | GATATTGTGCATGACACAGGCAGGGTATCGCCAATCTaGTTGGTCACCTCCCCACTTGGGTTTAAGGATAAA | + |
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Preference number: 6 (lower is better) Translates to: DIVHDTGRVSPI*LVTSPLGFKDK Trigger: TTTATCCTTAAACCCAAGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCATGCACAATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 90 bp | CTGGCCGGAGGGTCCATAATATGTCACAGAACAGGTGAATGGCATTaGTATGTCAGATCTGGTTGTCTTGTACTCCAAGGAGGAAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LAGGSIICHRTGEWH*YVRSGCLVLQGGSH Trigger: GTGACTTCCTCCTTGGAGTACAAGACAACCAGATCTGACATACAAATGCCATTCACCTGTTCTGTGACATATTATGGACCCTCCGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 90 bp | GATGGTTGCTTGAACACCTTGACTAGGGTAGGTGCTTCAAACACATaGTCCTCGGTCACTAGCATGCACACAAATCTCTTCTCATCACTG | + |
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Preference number: 6 (lower is better) Translates to: DGCLNTLTRVGASNT*SSVTSMHTNLFSSL Trigger: CAGTGATGAGAAGAGATTTGTGTGCATGCTAGTGACCGAGGACAATGTGTTTGAAGCACCTACCCTAGTCAAGGTGTTCAAGCAACCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000170035.8 |
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| CDS CCA 72 bp | GTCCAATGTATAGCTGGCTTTGGAAACCCTTCCACGTaGCAGATTATAGTTTTAGACAGTCCACTGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: VQCIAGFGNPST*QIIVLDSPLGS Trigger: TGACCCCAGTGGACTGTCTAAAACTATAATCTGCCACGTGGAAGGGTTTCCAAAGCCAGCTATACATTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CCA 72 bp | CCCACTGCCGGTAATGGTCCAATGTATAGCTGGCTTTaGAAACCCTTCCACGTGGCAGATTATAGTTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: PTAGNGPMYSWL*KPFHVADYSFR Trigger: TCTAAAACTATAATCTGCCACGTGGAAGGGTTTCCAAAGCCAGCTATACATTGGACCATTACCGGCAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 72 bp | CTGAACACCTTGACTAGGGTAGGTGCTTCAAACACATaGTCCTCGGTCACTAGCATGCACACAAATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LNTLTRVGASNT*SSVTSMHTNLF Trigger: GAAGAGATTTGTGTGCATGCTAGTGACCGAGGACAATGTGTTTGAAGCACCTACCCTAGTCAAGGTGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168071.2 |
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| CDS TCA 72 bp | GGCTTTTCATATTTCCATTTGCCAAACATGAGGTTCTaGGGTACATCGAGACGGCAAGGCATGACAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: GFSYFHLPNMRF*GTSRRQGMTMV Trigger: CACCATTGTCATGCCTTGCCGTCTCGATGTACCTCAGAACCTCATGTTTGGCAAATGGAAATATGAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000168071.2 ENSMUST00000170035.8 |
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| CDS CAA 72 bp | TTGAACACCTTGACTAGGGTAGGTGCTTCAAACACATaGTCCTCGGTCACTAGCATGCACACAAATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LNTLTRVGASNT*SSVTSMHTNLF Trigger: GAAGAGATTTGTGTGCATGCTAGTGACCGAGGACAATGTGTTTGAAGCACCTACCCTAGTCAAGGTGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000170035.8 |
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| CDS GCA 72 bp | TCTCTGTTTTCATCACTTATATCGTCTGCCTCATCGTaGTCTGGAATACTTATCGCAGAGACATTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SLFSSLISSASS*SGILIAETFRE Trigger: CTCCCTGAATGTCTCTGCGATAAGTATTCCAGAGCACGATGAGGCAGACGATATAAGTGATGAAAACAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 |
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| CDS CAA 72 bp | CTTTTTAAAAAGTATGGCCACCTCTCCTTCCACAGGTaGCAGCACTTTGCCATTCCTGTACCATGTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: LFKKYGHLSFHR*QHFAIPVPCDV Trigger: AACATCACATGGTACAGGAATGGCAAAGTGCTGCAACCTGTGGAAGGAGAGGTGGCCATACTTTTTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 72 bp | GCAGGGTATCGCCAATCTGCTTGGTCACCTCCCCACTaGGGTTTAAGGATAAATCCAAGTAGTAAATATCAA | + |
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Preference number: 6 (lower is better) Translates to: AGYRQSAWSPPH*GLRINPSSKYQ Trigger: TTGATATTTACTACTTGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167115.8 |
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| CDS CAA 72 bp | GGGTCCATAATATGTCACAGAACAGGTGAATGGCATTaGTATGTCAGATCTGGTTGTCTTGTACTCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSIICHRTGEWH*YVRSGCLVLQG Trigger: TCCTTGGAGTACAAGACAACCAGATCTGACATACAAATGCCATTCACCTGTTCTGTGACATATTATGGACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000167115.8 ENSMUST00000170035.8 |
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| CDS CAA 90 bp | ATGACACAGGCAGGGTATCGCCAATCTGCTTGGTCACCTCCCCACTaGGGTTTAAGGATAAATCCAAGTAGTAAATATCAAAGATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: MTQAGYRQSAWSPPH*GLRINPSSKYQRFL Trigger: AAGAAATCTTTGATATTTACTACTTGGATTTATCCTTAAACCCAAGTGGGGAGGTGACCAAGCAGATTGGCGATACCCTGCCTGTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167115.8 |
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| CDS CCA 72 bp | ACTTTTCTTCGTAGAAGATCGGAATGCAATAAATACTaGGGACCCATCGGGCTTTTCATATTTCCATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: TFLRRRSECNKY*GPIGLFIFPFA Trigger: GGCAAATGGAAATATGAAAAGCCCGATGGGTCCCCAGTATTTATTGCATTCCGATCTTCTACGAAGAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000168071.2 ENSMUST00000170035.8 |
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| CDS CAA 72 bp | TTTACAATTTCAGGTTTAGATGGTTGCTTGAACACCTaGACTAGGGTAGGTGCTTCAAACACATTGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: FTISGLDGCLNT*TRVGASNTLSS Trigger: CGAGGACAATGTGTTTGAAGCACCTACCCTAGTCAAGGTGTTCAAGCAACCATCTAAACCTGAAATTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000170035.8 |
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| CDS TCA 72 bp | CTGTCTCTTGAAATGCAGTCACCTAACTTTTTCAGCTaGTCTGTTTCAAGAAAGGGTGCTTTGTTTACAATT | + |
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Preference number: 6 (lower is better) Translates to: LSLEMQSPNFFS*SVSRKGALFTI Trigger: AATTGTAAACAAAGCACCCTTTCTTGAAACAGATCAGCTGAAAAAGTTAGGTGACTGCATTTCAAGAGACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023312.14 ENSMUST00000164728.8 ENSMUST00000170035.8 |
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