Pregenerated sensors for AKT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019699Ensembl transcript IDs: ENSMUST00000019843.15, ENSMUST00000111159.2, ENSMUST00000111160.9
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCAGCAGCGGCTCTaGTTCTCTAAGTCTGAGCCTAGAGGCCAAGACACTTGCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: YTPAVPAASHCQQRL*FSKSEPRGQDTCMR Trigger: TCTCATGCAAGTGTCTTGGCCTCTAGGCTCAGACTTAGAGAAGCAGAGCCGCTGCTGGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CCA 90 bp | GACACTCAGGTAGTCAGGGATGGGATGAGTAACCCCTTGAATGGCTaGGGACCAAGGGCCAGTGTGAGGAGTGGCCAGCCTGAGGCATTG | + |
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Preference number: 1 (lower is better) Translates to: DTQVVRDGMSNPLNG*GPRASVRSGQPEAL Trigger: CAATGCCTCAGGCTGGCCACTCCTCACACTGGCCCTTGGTCCCCAGCCATTCAAGGGGTTACTCATCCCATCCCTGACTACCTGAGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR GCA 90 bp | GGCAGCAGTCTGAGCAGAAGTGGCCAGTTTCCTCCCAGACAGCCCTaGATGGAGACAAGAGGTCAAGGTGGAGTTGGTAGGAGCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: GSSLSRSGQFPPRQP*METRGQGGVGRSWT Trigger: AGTCCAGCTCCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGGAGGAAACTGGCCACTTCTGCTCAGACTGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | GGAGTTGGTAGGAGCTGGACTCACAAAGCCAGAGCTGCCCGGACATaGTGCTGTCAGGTTTCAGGCCGTCTCAATTGCCAGAACCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: GVGRSWTHKARAART*CCQVSGRLNCQNPK Trigger: CTTAGGGTTCTGGCAATTGAGACGGCCTGAAACCTGACAGCATCATGTCCGGGCAGCTCTGGCTTTGTGAGTCCAGCTCCTACCAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CCA 90 bp | CAGGTTTCAGGCCGTCTCAATTGCCAGAACCCTAAGCTAGAGGCCTaGGCAACACAAGCTTTTAGAATCTCCTCCCACACCTCGGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: QVSGRLNCQNPKLEA*ATQAFRISSHTSVL Trigger: TAGAACCGAGGTGTGGGAGGAGATTCTAAAAGCTTGTGTTGCCCAGGCCTCTAGCTTAGGGTTCTGGCAATTGAGACGGCCTGAAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | ACGCCTTGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGCTTTaGTCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: TPWSSSCSCLLQERL*SLDVIVCFGKCQLL Trigger: TAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CCA 90 bp | TCTGCCAGACTATCCTCTCACATCCATCCCTTGGCACTGGGTAGTTaGGGATGCTCTCATTTCAGCTCCAAGGGGTTAAATCACAGCATC | + |
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Preference number: 1 (lower is better) Translates to: SARLSSHIHPLALGS*GCSHFSSKGLNHSI Trigger: GATGCTGTGATTTAACCCCTTGGAGCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CCA 90 bp | TTTCTCCATTACTTTCTGCCAGACTATCCTCTCACATCCATCCCTTaGCACTGGGTAGTTGGGGATGCTCTCATTTCAGCTCCAAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: FLHYFLPDYPLTSIP*HWVVGDALISAPRG Trigger: ACCCCTTGGAGCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTAATGGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR GCA 90 bp | AGACTATCCTCTCACATCCATCCCTTGGCACTGGGTAGTTGGGGATaGTCTCATTTCAGCTCCAAGGGGTTAAATCACAGCATCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: RLSSHIHPLALGSWG*SHFSSKGLNHSISS Trigger: AGAAGAGATGCTGTGATTTAACCCCTTGGAGCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CCA 90 bp | GACTTCCTACTGAAAAAGACAATGCAGTACCACTGTGTCACACTGTaGTCTTCCACTTCCATGATCACGCCTTGGAGCAGCAGTTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: DFLLKKTMQYHCVTL*SSTSMITPWSSSCS Trigger: AGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGTGGAAGACCACAGTGTGACACAGTGGTACTGCATTGTCTTTTTCAGTAGGAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | TGCAAAAACAAAACTGGAGTGTCTGTGTATATGGTTTCATGTGAGTaGAAGGTGGTGAGGGTGAAGACCCTTGGCTGGTCAGGGATGTCA | + |
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Preference number: 1 (lower is better) Translates to: CKNKTGVSVYMVSCE*KVVRVKTLGWSGMS Trigger: TGACATCCCTGACCAGCCAAGGGTCTTCACCCTCACCACCTTTCACTCACATGAAACCATATACACAGACACTCCAGTTTTGTTTTTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | TTCATGCAAAAACAAAACTGGAGTGTCTGTGTATATGGTTTCATGTaGGTGAAAGGTGGTGAGGGTGAAGACCCTTGGCTGGTCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: FMQKQNWSVCVYGFM*VKGGEGEDPWLVRD Trigger: ATCCCTGACCAGCCAAGGGTCTTCACCCTCACCACCTTTCACTCACATGAAACCATATACACAGACACTCCAGTTTTGTTTTTGCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | AGCTGTCTGTACGAAGGAAGTAATGTGTGTCCCTATCAGAGAGTGTaGGATACTGAGAGTGGACAGTGTACAAAATCAGGTTCTTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SCLYEGSNVCPYQRV*DTESGQCTKSGSWK Trigger: CTTCCAAGAACCTGATTTTGTACACTGTCCACTCTCAGTATCTCACACTCTCTGATAGGGACACACATTACTTCCTTCGTACAGACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | ACATTCCTTGCACATGGGTCAAAAGAAAACGCAGGCAATGATCTGTaGATTGGAGCTGCGCTTGCTAACATGACAACACAATTCTTACCA | + |
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Preference number: 1 (lower is better) Translates to: TFLAHGSKENAGNDL*IGAALANMTTQFLP Trigger: TGGTAAGAATTGTGTTGTCATGTTAGCAAGCGCAGCTCCAATTCACAGATCATTGCCTGCGTTTTCTTTTGACCCATGTGCAAGGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | CACCAAAGGGTTAATCTGAAGATCATCATTAATGAAGGAGAAAGATaGGGTTTGCATACATGTCCCCTCTCAGTGAGAAATGTTTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: HQRVNLKIIINEGER*GLHTCPLSVRNVWV Trigger: AACCCAAACATTTCTCACTGAGAGGGGACATGTATGCAAACCTCATCTTTCTCCTTCATTAATGATGATCTTCAGATTAACCCTTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR TCA 90 bp | AGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCAAAGGGTTAATCTaGAGATCATCATTAATGAAGGAGAAAGATGAGGTTTGCATACAT | + |
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Preference number: 1 (lower is better) Translates to: SLLWKVSAPSTKGLI*RSSLMKEKDEVCIH Trigger: ATGTATGCAAACCTCATCTTTCTCCTTCATTAATGATGATCTTCAGATTAACCCTTTGGTGCTAGGAGCTGACACTTTCCAAAGCAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCAAACCTGGGCATCCATaGGTGGCACTGGGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: CLRKMPFTPQQSQRPATAKPGHP*VALGFL Trigger: GAGGAAGCCCAGTGCCACCCATGGATGCCCAGGTTT...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | ACCTGTAGTGACACTCAGGTAGTCAGGGATGGGATGAGTAACCCCTaGAATGGCTGGGGACCAAGGGCCAGTGTGAGGAGTGGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TCSDTQVVRDGMSNP*NGWGPRASVRSGQP Trigger: AGGCTGGCCACTCCTCACACTGGCCCTTGGTCCCCAGCCATTCAAGGGGTTACTCATCCCATCCCTGACTACCTGAGTGTCACTACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | TTCCTCCCAGACAGCCCTGCATGGAGACAAGAGGTCAAGGTGGAGTaGGTAGGAGCTGGACTCACAAAGCCAGAGCTGCCCGGACATGAT | + |
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Preference number: 2 (lower is better) Translates to: FLPDSPAWRQEVKVE*VGAGLTKPELPGHD Trigger: ATCATGTCCGGGCAGCTCTGGCTTTGTGAGTCCAGCTCCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCGTAGCAGCAACAGCATaGGACCTTAGACTGAGATAC | + |
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Preference number: 2 (lower is better) Translates to: CLRKMPFTPQQSQRPATAVAATA*DLRLRY Trigger: GTATCTCAGTCTAAGGTCTCATGCTGTTGCTGCTAC...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCGCAGTTGCTCTTGCTTaGTGCAAGAGAGGCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: CLRKMPFTPQQSQRPATAAVALA*CKRGFD Trigger: ATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGC...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCTAGAGGCCTGGGCAACACAAGCTTTTAGAATCTCCTCCCACACCTCGGTTCTGGGCATCCATGGGTaGCACTGGGCTTCCTCCACA | + |
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Preference number: 2 (lower is better) Translates to: KLEAWATQAFRISSHTSVLGIHG*HWASST Trigger: TGTGGAGGAAGCCCAGTGCCACCCATGGATGCCCAG...AACCGAGGTGTGGGAGGAGATTCTAAAAGCTTGTGTTGCCCAGGCCTCTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | TCTAGGGGACTCTGCACCGTCAGTACTTGGTTGAACAATGTCCATTaGCCCTTGAAACCTGGGCATCCATGGGTGGCACTGGGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SRGLCTVSTWLNNVH*PLKPGHPWVALGFL Trigger: GAGGAAGCCCAGTGCCACCCATGGATGCCCAGGTTTCAAGGGCAAATGGACATTGTTCAACCAAGTACTGACGGTGCAGAGTCCCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCGTATATGGTTTCATGTaGGTGAAAGGTGGTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: CLRKMPFTPQQSQRPATAVYGFM*VKGGEG Trigger: ACCCTCACCACCTTTCACTCACATGAAACCATATAC...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR GCA 90 bp | CCCAGACAGCCCTGCATGGAGACAAGAGGTCAAGGTGGAGTTGGTAGGAGCTGGGCAGTTGCTCTTGCTTaGTGCAAGAGAGGCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: PRQPCMETRGQGGVGRSWAVALA*CKRGFD Trigger: ATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGC...CCAGCTCCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | GGACTCTGCACCGTCAGTACTTGGTTGAACAATGTCCATTTGCCCTaGAAACCTGGGCATCCATGGGTGGCACTGGGCTTCCTCCACAAT | + |
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Preference number: 2 (lower is better) Translates to: GLCTVSTWLNNVHLP*KPGHPWVALGFLHN Trigger: ATTGTGGAGGAAGCCCAGTGCCACCCATGGATGCCCAGGTTTCAAGGGCAAATGGACATTGTTCAACCAAGTACTGACGGTGCAGAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCAGGCAAAGTCTAAGATaGCAGTGTAGAAACAGACTG | + |
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Preference number: 2 (lower is better) Translates to: CLRKMPFTPQQSQRPATARQSLR*QCRNRL Trigger: CAGTCTGTTTCTACACTGTCATCTTAGACTTTGCCT...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCATGATCACGCCTTGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGCTCACATCCATCCCTTaGCACTGGGTAGTTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TSMITPWSSSCSCLLQERLTSIP*HWVVGD Trigger: ATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAG...CCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | CACGCCTTGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGCTTaGATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HALEQQLLLLAAREA*ILGRHSLLWKVSAP Trigger: AGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | CACACTGTGGTCTTCCACTTCCATGATCACGCCTTGGAGCAGCAGTaGCTCTTGCTTGCTGCAAGAGAGGCTTTGATCCTTGGACGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HTVVFHFHDHALEQQ*LLLAAREALILGRH Trigger: ATGACGTCCAAGGATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGTGGAAGACCACAGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | GTACCACTGTGTCACACTGTGGTCTTCCACTTCCATGATCACGCCTaGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGCTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: VPLCHTVVFHFHDHA*EQQLLLLAAREALI Trigger: GATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGTGGAAGACCACAGTGTGACACAGTGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGATGGTTTCATGTGAGTaGAAGGTGGTGAGGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GDPAVSEGKKHVAPARSQMVSCE*KVVRVK Trigger: CTTCACCCTCACCACCTTTCACTCACATGAAACCAT...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGCCAGCCAAATGTCAGTaGTACACACTTCATGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GDPAVSEGKKHVAPARSQPAKCQ*YTLHVL Trigger: CAGCACATGAAGTGTGTATCACTGACATTTGGCTGG...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCACTTGCATGAGAACATaGCTTCCTACTGAAAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: CLRKMPFTPQQSQRPATATCMRT*LPTEKD Trigger: GTCTTTTTCAGTAGGAAGTCATGTTCTCATGCAAGT...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 90 bp | CTTTCTCCATTACTTTCTGCCAGACTATCCTCTCACATCCATCCCTaGGCACTGGGTAGTTGGGGATGCTCTCATTTCAGCTCCAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPLLSARLSSHIHP*ALGSWGCSHFSSKG Trigger: CCCCTTGGAGCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTAATGGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCATGATCACGCCTTGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGATGGTTTCATGTGAGTaGAAGGTGGTGAGGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: TSMITPWSSSCSCLLQERMVSCE*KVVRVK Trigger: CTTCACCCTCACCACCTTTCACTCACATGAAACCAT...CCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR TCA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAACATGTCCCCTCTCAGTaGGAAATGTTTGGGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEHVPSQ*EMFGLG Trigger: TCCCAACCCAAACATTTCTCACTGAGAGGGGACATG...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGACAGCCCTGCATGGAGACAAGAGGTCAAGGTGGAGTTGGTAGGAGCTGGGAGTGTCTGTGTATATaGTTTCATGTGAGTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PRQPCMETRGQGGVGRSWECLCI*FHVSER Trigger: CCTTTCACTCACATGAAACCATATACACAGACACTC...CCAGCTCCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR GCA 90 bp | ATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCAAAGGGCTGGGTAGTTGGGGATaGTCTCATTTCAGCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ILGRHSLLWKVSAPSTKGLGSWG*SHFSSK Trigger: CTTGGAGCTGAAATGAGAGCATCCCCAACTACCCAG...CCCTTTGGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAAGTTGCTCTTGCTTGCTaGAAGAGAGGCTTTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEVALAC*KRGFDP Trigger: AGGATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAAC...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAATTGGACGTCATAGTCTaGTTTGGAAAGTGTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: HLGSTSAFPLTSGGGCKELDVIV*FGKCQL Trigger: GAGCTGACACTTTCCAAAGCAGACTATGACGTCCAA...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAAGAATTCTTGAACTCAAAGCCAAGAACCCACCTGTAGTGACACTCAGGCGGCCAGGCTCAGCTTaGTTTTCTTCCTCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KERILELKAKNPPVVTLRRPGSA*FSSSPP Trigger: AGGAGGAGAGGAAGAAAAGCAAGCTGAGCCTGGCCG...CCTGAGTGTCACTACAGGTGGGTTCTTGGCTTTGAGTTCAAGAATTCTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTCACATCCATCCCTTGGCACTGGGTAGTTGGGGATGCTCTCATTTCAGCTGCACCGTCAGTACTTaGTTGAACAATGTCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: SSHIHPLALGSWGCSHFSCTVST*LNNVHL Trigger: CAAATGGACATTGTTCAACCAAGTACTGACGGTGCA...GCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGGTGATGTGTTCATTTTaGCGAGTAGAGTTCATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GDPAVSEGKKHVAPARSQVMCSF*RVEFIS Trigger: AGAAATGAACTCTACTCGGCAAAATGAACACATCAC...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACAAAACAAAAGAAGCTGTGTGCTTAGTGTACAGTGTCTGCTCCCTCTGAGGAGCAGCAGTTGCTCTTaGTTGCTGCAAGAGAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RQNKRSCVLSVQCLLPLRSSSCS*LLQERL Trigger: AAGCCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCT...CCTCAGAGGGAGCAGACACTGTACACTAAGCACACAGCTTCTTTTGTTTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTAGAGGCCTGGGCAACACAAGCTTTTAGAATCTCCTCCCACACCTCGGTTAACACCTGTTCACCTTaGTGTATAGATTTTGGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: KLEAWATQAFRISSHTSVNTCSP*CIDFGD Trigger: GTCGCCAAAATCTATACACCAAGGTGAACAGGTGTT...AACCGAGGTGTGGGAGGAGATTCTAAAAGCTTGTGTTGCCCAGGCCTCTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACTCAGCTCCGAGAAGCTaGAGGTCAGGTGGGAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINSAPRS*RSGGKW Trigger: CCATTTCCCACCTGACCTCCAGCTTCTCGGAGCTGA...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACCTTCTGCCTTTCCACTaGCATCTGGTGGAGGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINLLPFH*HLVEGV Trigger: TACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAG...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGACTTCCTTGTCAATGTaGAACATTCAACATACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GDPAVSEGKKHVAPARSQTSLSM*NIQHTS Trigger: AGAAGTATGTTGAATGTTGCACATTGACAAGGAAGT...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGGTGAAGACCCTTGGCTaGTCAGGGATGTCAGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: NMSQTTNLQGGDSMTNSEVKTLG*SGMSEG Trigger: ACCTTCTGACATCCCTGACCAGCCAAGGGTCTTCAC...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACGTGAAGACCCTTGGCTaGTCAGGGATGTCAGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINVKTLG*SGMSEG Trigger: ACCTTCTGACATCCCTGACCAGCCAAGGGTCTTCAC...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAAAAATGTGTATCTCATTaGCCCTTCAGTCCTCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEKCVSH*PFSPLN Trigger: ATTGAGAGGACTGAAGGGCCAATGAGATACACATTT...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCCATTACTTTCTGCCAGACTATCCTCTCACATCCATCCCTTGGCACTGGGTATGCACCGTCAGTACTTaGTTGAACAATGTCCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: LHYFLPDYPLTSIPWHWVCTVST*LNNVHL Trigger: CAAATGGACATTGTTCAACCAAGTACTGACGGTGCA...TACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTAATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAAGGGGAAAATACTCTCTaGTACAAAGTAGATCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEGENTL*YKVDPK Trigger: CTTAGGATCTACTTTGTACCAGAGAGTATTTTCCCC...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACGGAGTTGGTAGGAGCTaGACTCACAAAGCCAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINGVGRS*THKARA Trigger: AGCTCTGGCTTTGTGAGTCCAGCTCCTACCAACTCC...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGAAAGATGAGGTTTGCATACATGTCCCCTCTCAGTGAGAAATGTTTGGGTCCAGCCAAATGTCAGTaGTACACACTTCATGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RRKMRFAYMSPLSEKCLGPAKCQ*YTLHVL Trigger: CAGCACATGAAGTGTGTATCACTGACATTTGGCTGG...ACCCAAACATTTCTCACTGAGAGGGGACATGTATGCAAACCTCATCTTTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCAAAGGGGGTGTGTACATTCCTTaGACATGGGTCAAAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ILGRHSLLWKVSAPSTKGGVYIP*TWVKRK Trigger: TTTTCTTTTGACCCATGTGCAAGGAATGTACACACC...CCCTTTGGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTGATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCTTTTGTTGTTTTCCCTaGTGGCTTGATTCAGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: ALILGRHSLLWKVSAPSTFCCFP*WLDSVM Trigger: CATTACTGAATCAAGCCATCAGGGAAAACAACAAAA...GGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACAAGCTGGAGGTCAGGTaGGAAATGGGAACAATACTG | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINKLEVR*EMGTIL Trigger: CAGTATTGTTCCCATTTCCCACCTGACCTCCAGCTT...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTGTCAATGTCCCCTCATTAATCTTCACAAAGTATCCTTGGCCAAGGTCATGGTATATGGTTTCATGTaGGTGAAAGGTGGTGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: HCQCPLINLHKVSLAKVMVYGFM*VKGGEG Trigger: ACCCTCACCACCTTTCACTCACATGAAACCATATAC...CATGACCTTGGCCAAGGATACTTTGTGAAGATTAATGAGGGGACATTGACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTTCATTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCGTAGCAGCAACAGCATaGGACCTTAGACTGAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: RVHFSSSFGSQLSPLLSAVAATA*DLRLRY Trigger: GTATCTCAGTCTAAGGTCTCATGCTGTTGCTGCTAC...GGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAATGAACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR GCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGGAGAAAGATGAGGTTTaGATACATGTCCCCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NMSQTTNLQGGDSMTNSEEKDEV*IHVPSQ Trigger: CTGAGAGGGGACATGTATGCAAACCTCATCTTTCTC...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTGTCAATGTCCCCTCATTAATCTTCACAAAGTATCCTTGGCCAAGGTCATGGAGAAAGATGAGGTTTaGATACATGTCCCCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HCQCPLINLHKVSLAKVMEKDEV*IHVPSQ Trigger: CTGAGAGGGGACATGTATGCAAACCTCATCTTTCTC...CATGACCTTGGCCAAGGATACTTTGTGAAGATTAATGAGGGGACATTGACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAAACAAAAGAAGCTGTGTGCTTAGTGTACAGTGTCTGCTCCCTCTGAGGGGGGAAAATACTCTCTaGTACAAAGTAGATCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: RQNKRSCVLSVQCLLPLRGENTL*YKVDPK Trigger: CTTAGGATCTACTTTGTACCAGAGAGTATTTTCCCC...CCTCAGAGGGAGCAGACACTGTACACTAAGCACACAGCTTCTTTTGTTTTGTCT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CAA 90 bp | GTGATGTGTTCATTTTGCCGAGTAGAGTTCATTTCTCATCATCATTaGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGACTATCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: VMCSFCRVEFISHHH*GLSFLHYFLPDYPL Trigger: GAGAGGATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAATGAACTCTACTCGGCAAAATGAACACATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | AGACAAAACAAAAGAAGCTGTGTGCTTAGTGTACAGTGTCTGCTCCCTCTGAGGTTTTGTTGTTTTCCCTaGTGGCTTGATTCAGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: RQNKRSCVLSVQCLLPLRFCCFP*WLDSVM Trigger: CATTACTGAATCAAGCCATCAGGGAAAACAACAAAA...CCTCAGAGGGAGCAGACACTGTACACTAAGCACACAGCTTCTTTTGTTTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAAAGAATTCTTGAACTCAAAGCCAAGAACCCACCTGTAGTGACACTCAGGGAGTGTCTGTGTATATaGTTTCATGTGAGTGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KERILELKAKNPPVVTLRECLCI*FHVSER Trigger: CCTTTCACTCACATGAAACCATATACACAGACACTC...CCTGAGTGTCACTACAGGTGGGTTCTTGGCTTTGAGTTCAAGAATTCTTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACTACATTCCTTGCACATaGGTCAAAAGAAAACGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINYIPCT*VKRKRR Trigger: CCTGCGTTTTCTTTTGACCCATGTGCAAGGAATGTA...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACTTTTCCCTGATGGCTTaGTTCAGTAATGAATGTACC | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINFSLMA*FSNECT Trigger: GGTACATTCATTACTGAATCAAGCCATCAGGGAAAA...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACACAAAAATCTATGTCTaGGTCTGTCTTAGCTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINTKIYV*VCLSCL Trigger: AAGGCAGCTAAGACAGACTCAGACATAGATTTTTGT...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGAGGTCAGGTGGGAAATaGGAACAATACTGGAATAAT | + |
|
Preference number: 2 (lower is better) Translates to: NMSQTTNLQGGDSMTNSERSGGK*EQYWNN Trigger: ATTATTCCAGTATTGTTCCCATTTCCCACCTGACCT...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGAAAGATGAGGTTTGCATACATGTCCCCTCTCAGTGAGAAATGTTTGGGTCCACCCTTCAACAATTaGTTGTTCAGAAATATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RRKMRFAYMSPLSEKCLGPPFNN*LFRNIN Trigger: GTTTATATTTCTGAACAAGCAATTGTTGAAGGGTGG...ACCCAAACATTTCTCACTGAGAGGGGACATGTATGCAAACCTCATCTTTCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | AACAATGTACCTAGAATCAGTGTATCTCATTTAGCCTTCACTGCTAGGGAAAACTGCACAAATGAACAATaGGCTCATGACTCCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NNVPRISVSHLAFTARENCTNEQ*AHDSQR Trigger: TCTTTGGGAGTCATGAGCCCATTGTTCATTTGTGCA...GTTTTCCCTAGCAGTGAAGGCTAAATGAGATACACTGATTCTAGGTACATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGACTATCAAATGTGTATCTCATTaGCCCTTCAGTCCTCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: FLIIIWVSAFSITFCQTIKCVSH*PFSPLN Trigger: ATTGAGAGGACTGAAGGGCCAATGAGATACACATTT...GATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACCCACCCTTCAACAATTaGTTGTTCAGAAATATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RFLEVTSHPVGHKRKDINPPFNN*LFRNIN Trigger: GTTTATATTTCTGAACAAGCAATTGTTGAAGGGTGG...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTGTCAATGTCCCCTCATTAATCTTCACAAAGTATCCTTGGCCAAGGTCATGTCCTTTCTTACAGAATaGATGCAGGGTAACTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HCQCPLINLHKVSLAKVMSFLTE*MQGNLK Trigger: TTTTAAGTTACCCTGCATCCATTCTGTAAGAAAGGA...CATGACCTTGGCCAAGGATACTTTGTGAAGATTAATGAGGGGACATTGACAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CAA 90 bp | TTATCCTTTACTTCCTATTGTGTGAATACTTGTGATGTGTTCATTTaGCCGAGTAGAGTTCATTTCTCATCATCATTTGGGTCTCAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSFTSYCVNTCDVFI*PSRVHFSSSFGSQL Trigger: AAGCTGAGACCCAAATGATGATGAGAAATGAACTCTACTCGGCAAAATGAACACATCACAAGTATTCACACAATAGGAAGTAAAGGATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR GCA 72 bp | GCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTaGCAGCAGCGGCTCTGCTTCTCTAAGTCTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALYTPAVPAASH*QQRLCFSKSEP Trigger: AGGCTCAGACTTAGAGAAGCAGAGCCGCTGCTGGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR GCA 72 bp | GCAGTCCCAGCGGCCAGCCACTGCCAGCAGCGGCTCTaGTTCTCTAAGTCTGAGCCTAGAGGCCAAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: AVPAASHCQQRL*FSKSEPRGQDT Trigger: AGTGTCTTGGCCTCTAGGCTCAGACTTAGAGAAGCAGAGCCGCTGCTGGCAGTGGCTGGCCGCTGGGACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | GTAGTCAGGGATGGGATGAGTAACCCCTTGAATGGCTaGGGACCAAGGGCCAGTGTGAGGAGTGGCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VVRDGMSNPLNG*GPRASVRSGQP Trigger: AGGCTGGCCACTCCTCACACTGGCCCTTGGTCCCCAGCCATTCAAGGGGTTACTCATCCCATCCCTGACTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGTCGGCCAGGCTCAGCTaGCTTTTCTTCCTCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GDPAVSEGKKHVAPARSQSARLS*LFFLSS Trigger: GGAGGAGAGGAAGAAAAGCAAGCTGAGCCTGGCCGA...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR GCA 72 bp | CTGAGCAGAAGTGGCCAGTTTCCTCCCAGACAGCCCTaGATGGAGACAAGAGGTCAAGGTGGAGTTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSRSGQFPPRQP*METRGQGGVGR Trigger: CCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGGAGGAAACTGGCCACTTCTGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | GCAGAAGTGGCCAGTTTCCTCCCAGACAGCCCTGCATaGAGACAAGAGGTCAAGGTGGAGTTGGTAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AEVASFLPDSPA*RQEVKVELVGA Trigger: AGCTCCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGGAGGAAACTGGCCACTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | GTGGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTaGCCCCTGCAAGAAGTCAGCTCCGAGAAGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VETLQLVRERSM*PLQEVSSEKLE Trigger: CTCCAGCTTCTCGGAGCTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCCATGATCACGCCTTGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGTCTCACATCCATCCCTaGGCACTGGGTAGTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSMITPWSSSCSCLLQERSHIHP*ALGSWG Trigger: TCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGA...CCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR GCA 72 bp | TCTATGTCTGAGTCTGTCTTAGCTGCCTTAGGAAAATaGCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SMSESVLAALGK*PLHPSSPSGQP Trigger: TGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCAGCTAAGACAGACTCAGACATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | GGCCGTCTCAATTGCCAGAACCCTAAGCTAGAGGCCTaGGCAACACAAGCTTTTAGAATCTCCTCCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: GRLNCQNPKLEA*ATQAFRISSHT Trigger: GGTGTGGGAGGAGATTCTAAAAGCTTGTGTTGCCCAGGCCTCTAGCTTAGGGTTCTGGCAATTGAGACGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAAGCCTTGGAGCAGCAGTaGCTCTTGCTTGCTGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEALEQQ*LLLAAR Trigger: TCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGC...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | AGTACCACTGTGTCACACTGTGGTCTTCCACTTCCATaGTCACGCCTTGGAGCAGCAGTTGCTCTTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: STTVSHCGLPLP*SRLGAAVALAC Trigger: GCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGTGGAAGACCACAGTGTGACACAGTGGTACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGACAGCCCTGCATGGAGACAAGAGGTCAAGGTGGAGTTGGTAGGAGCTGGGTAAGGAAAGAATTCTaGAACTCAAAGCCAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: PRQPCMETRGQGGVGRSWVRKEF*NSKPRT Trigger: GGTTCTTGGCTTTGAGTTCAAGAATTCTTTCCTTAC...CCAGCTCCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR GCA 72 bp | TCTCACATCCATCCCTTGGCACTGGGTAGTTGGGGATaGTCTCATTTCAGCTCCAAGGGGTTAAATCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SHIHPLALGSWG*SHFSSKGLNHS Trigger: GCTGTGATTTAACCCCTTGGAGCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | CTATCCTCTCACATCCATCCCTTGGCACTGGGTAGTTaGGGATGCTCTCATTTCAGCTCCAAGGGGTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSSHIHPLALGS*GCSHFSSKGLN Trigger: ATTTAACCCCTTGGAGCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | TACTTTCTGCCAGACTATCCTCTCACATCCATCCCTTaGCACTGGGTAGTTGGGGATGCTCTCATTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YFLPDYPLTSIP*HWVVGDALISA Trigger: AGCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGGTAAGGAAAGAATTCTaGAACTCAAAGCCAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: GDPAVSEGKKHVAPARSQVRKEF*NSKPRT Trigger: GGTTCTTGGCTTTGAGTTCAAGAATTCTTTCCTTAC...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | AGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGCTTTaGTCCTTGGACGTCATAGTCTGCTTTGGAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSSCSCLLQERL*SLDVIVCFGKC Trigger: ACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCTTGAACAATGTCCATTaGCCCTTGAAACCTGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALILGRHSLLWKVSAPSTLNNVH*PLKPGH Trigger: ATGCCCAGGTTTCAAGGGCAAATGGACATTGTTCAA...GGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCAAAGGGGGGTGTGTACATTCCTaGCACATGGGTCAAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ILGRHSLLWKVSAPSTKGGCVHS*HMGQKK Trigger: TTTCTTTTGACCCATGTGCAAGGAATGTACACACCC...CCCTTTGGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACTCTCACATCCATCCCTaGGCACTGGGTAGTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RFLEVTSHPVGHKRKDINSHIHP*ALGSWG Trigger: TCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGA...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAAATTTCTCATCATCATTaGGGTCTCAGCTTTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEISHHH*GLSFLH Trigger: ATGGAGAAAGCTGAGACCCAAATGATGATGAGAAAT...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | AAAACTGGAGTGTCTGTGTATATGGTTTCATGTGAGTaGAAGGTGGTGAGGGTGAAGACCCTTGGCTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KTGVSVYMVSCE*KVVRVKTLGWS Trigger: TGACCAGCCAAGGGTCTTCACCCTCACCACCTTTCACTCACATGAAACCATATACACAGACACTCCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | AGAGAGGCTTTGATCCTTGGACGTCATAGTCTGCTTTaGAAAGTGTCAGCTCCTAGCACCAAAGGGTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: REALILGRHSLL*KVSAPSTKGLI Trigger: GATTAACCCTTTGGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGCCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCTGTGATGTGTTCATTTaGCCGAGTAGAGTTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALILGRHSLLWKVSAPSTCDVFI*PSRVHF Trigger: GAAATGAACTCTACTCGGCAAAATGAACACATCACA...GGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | AAACAAAACTGGAGTGTCTGTGTATATGGTTTCATGTaGGTGAAAGGTGGTGAGGGTGAAGACCCTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KQNWSVCVYGFM*VKGGEGEDPWL Trigger: CAGCCAAGGGTCTTCACCCTCACCACCTTTCACTCACATGAAACCATATACACAGACACTCCAGTTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | GCACATGGGTCAAAAGAAAACGCAGGCAATGATCTGTaGATTGGAGCTGCGCTTGCTAACATGACAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: AHGSKENAGNDL*IGAALANMTTQ Trigger: TTGTGTTGTCATGTTAGCAAGCGCAGCTCCAATTCACAGATCATTGCCTGCGTTTTCTTTTGACCCATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | TCTGAGCCTAGAGGCCAAGACACTTGCATGAGAACATaGCTTCCTACTGAAAAAGACAATGCAGTACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SEPRGQDTCMRT*LPTEKDNAVPL Trigger: CAGTGGTACTGCATTGTCTTTTTCAGTAGGAAGTCATGTTCTCATGCAAGTGTCTTGGCCTCTAGGCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR GCA 72 bp | ATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTaGCAGACTATCCTCTCACATCCATCCCTTGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: IIIWVSAFSITF*QTILSHPSLGT Trigger: AGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAAGAATTCTTGAACTCAAAGCCAAGAACCCACCTGTAGTGACACTCAGGCTGCACCGTCAGTACTaGGTTGAACAATGTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: KERILELKAKNPPVVTLRLHRQY*VEQCPF Trigger: AAATGGACATTGTTCAACCAAGTACTGACGGTGCAG...CCTGAGTGTCACTACAGGTGGGTTCTTGGCTTTGAGTTCAAGAATTCTTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGGCAATGATCTGTGAATaGGAGCTGCGCTTGCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: NMSQTTNLQGGDSMTNSEAMICE*ELRLLT Trigger: TGTTAGCAAGCGCAGCTCCAATTCACAGATCATTGC...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTGTCAATGTCCCCTCATTAATCTTCACAAAGTATCCTTGGCCAAGGTCATGCTGCACCGTCAGTACTaGGTTGAACAATGTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HCQCPLINLHKVSLAKVMLHRQY*VEQCPF Trigger: AAATGGACATTGTTCAACCAAGTACTGACGGTGCAG...CATGACCTTGGCCAAGGATACTTTGTGAAGATTAATGAGGGGACATTGACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | TACGAAGGAAGTAATGTGTGTCCCTATCAGAGAGTGTaGGATACTGAGAGTGGACAGTGTACAAAATCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YEGSNVCPYQRV*DTESGQCTKSG Trigger: ACCTGATTTTGTACACTGTCCACTCTCAGTATCTCACACTCTCTGATAGGGACACACATTACTTCCTTCGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | GATACTGAGAGTGGACAGTGTACAAAATCAGGTTCTTaGAAGTTACTTCACACCCTGTGGGTCATAAACGTA | + |
|
Preference number: 3 (lower is better) Translates to: DTESGQCTKSGS*KLLHTLWVINV Trigger: TACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCTGATTTTGTACACTGTCCACTCTCAGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGACTATCTTGAACAATGTCCATTaGCCCTTGAAACCTGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: FLIIIWVSAFSITFCQTILNNVH*PLKPGH Trigger: ATGCCCAGGTTTCAAGGGCAAATGGACATTGTTCAA...GATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTTCATTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCGGGTGTGTACATTCCTaGCACATGGGTCAAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RVHFSSSFGSQLSPLLSAGCVHS*HMGQKK Trigger: TTTCTTTTGACCCATGTGCAAGGAATGTACACACCC...GGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAATGAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAAGAATTCTTGAACTCAAAGCCAAGAACCCACCTGTAGTGACACTCAGGATTTCTCATCATCATTaGGGTCTCAGCTTTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KERILELKAKNPPVVTLRISHHH*GLSFLH Trigger: ATGGAGAAAGCTGAGACCCAAATGATGATGAGAAAT...CCTGAGTGTCACTACAGGTGGGTTCTTGGCTTTGAGTTCAAGAATTCTTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGAAAGATGAGGTTTGCATACATGTCCCCTCTCAGTGAGAAATGTTTGGGTTGTGATGTGTTCATTTaGCCGAGTAGAGTTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRKMRFAYMSPLSEKCLGCDVFI*PSRVHF Trigger: GAAATGAACTCTACTCGGCAAAATGAACACATCACA...ACCCAAACATTTCTCACTGAGAGGGGACATGTATGCAAACCTCATCTTTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR TCA 72 bp | TGGAAAGTGTCAGCTCCTAGCACCAAAGGGTTAATCTaGAGATCATCATTAATGAAGGAGAAAGATGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WKVSAPSTKGLI*RSSLMKEKDEV Trigger: AACCTCATCTTTCTCCTTCATTAATGATGATCTTCAGATTAACCCTTTGGTGCTAGGAGCTGACACTTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CCA 72 bp | GGTTTGCATACATGTCCCCTCTCAGTGAGAAATGTTTaGGTTGGGAGACATGAATATGTACAGAAAAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLHTCPLSVRNV*VGRHEYVQKNK Trigger: TTTATTTTTCTGTACATATTCATGTCTCCCAACCCAAACATTTCTCACTGAGAGGGGACATGTATGCAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR GCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGATCCTCTCCTCCTCTTaGCTCTGCAATCGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDPAVSEGKKHVAPARSQILSSS*LCNRSA Trigger: AGCCGACCGATTGCAGAGGCAAGAGGAGGAGAGGAT...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGACAGCCCTGCATGGAGACAAGAGGTCAAGGTGGAGTTGGTAGGAGCTGGCCTCATGATTTCTTTTaGATCATCTGGCCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PRQPCMETRGQGGVGRSWPHDFF*IIWPST Trigger: GGTGGAGGGCCAGATGATGCAAAAGAAATCATGAGG...CCAGCTCCTACCAACTCCACCTTGACCTCTTGTCTCCATGCAGGGCTGTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGCGCTCTCTCGACAAATaGAAAAACAGCTCTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDPAVSEGKKHVAPARSQRSLDK*KNSSPP Trigger: TGGCGGAGAGCTGTTTTTCCATTTGTCGAGAGAGCG...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CAA 72 bp | CTCTGCACCGTCAGTACTTGGTTGAACAATGTCCATTaGCCCTTGAAACCTGGGCATCCATGGGTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LCTVSTWLNNVH*PLKPGHPWVAL Trigger: CAGTGCCACCCATGGATGCCCAGGTTTCAAGGGCAAATGGACATTGTTCAACCAAGTACTGACGGTGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CAA 72 bp | TGTCACACTGTGGTCTTCCACTTCCATGATCACGCCTaGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CHTVVFHFHDHA*EQQLLLLAARE Trigger: CTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGTGGAAGACCACAGTGTGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCCATGATCACGCCTTGGAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGCCAGGTACTCTGGTGTaGCACAGAATGTCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TSMITPWSSSCSCLLQERPGTLV*HRMSSW Trigger: CCATGAAGACATTCTGTGGCACACCAGAGTACCTGG...CCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTCCAAGGCGTGATCATGGAAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR TCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGTCTCCTTATAGCCTATaGATGAGCCATCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDPAVSEGKKHVAPARSQSPYSL*MSHLSS Trigger: TGAAGACAGATGGCTCATTCATAGGCTATAAGGAGA...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR GCA 90 bp | CTCCATTACTTTCTGCCAGACTATCCTCTCACATCCATCCCTTGGCACTGGGTACACCATAGAAACGTGTaGGGTCCTCAGAGAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LHYFLPDYPLTSIPWHWVHHRNV*GPQRTL Trigger: GAGTGTTCTCTGAGGACCGCACACGTTTCTATGGTG...TACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTAATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR GCA 90 bp | CTCCATTACTTTCTGCCAGACTATCCTCTCACATCCATCCCTTGGCACTGGGTACCAGGTACTCTGGTGTaGCACAGAATGTCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LHYFLPDYPLTSIPWHWVPGTLV*HRMSSW Trigger: CCATGAAGACATTCTGTGGCACACCAGAGTACCTGG...TACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTAATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCAAACGGTCTTTTGTCTaGAAGGAATATTTCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLRKMPFTPQQSQRPATAKRSFV*KEYFKD Trigger: ATCCTTGAAATATTCCTTCCAGACAAAAGACCGTTT...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CAA 72 bp | AGACTCTCTAGGGGACTCTGCACCGTCAGTACTTGGTaGAACAATGTCCATTTGCCCTTGAAACCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLSRGLCTVSTW*NNVHLPLKPGH Trigger: ATGCCCAGGTTTCAAGGGCAAATGGACATTGTTCAACCAAGTACTGACGGTGCAGAGTCCCCTAGAGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| 3UTR CAA 72 bp | GAGCAGCAGTTGCTCTTGCTTGCTGCAAGAGAGGCTTaGATCCTTGGACGTCATAGTCTGCTTTGGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQQLLLLAAREA*ILGRHSLLWKV Trigger: CACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGCCTCTCTTGCAGCAAGCAAGAGCAACTGCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR TCA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAATATTCTCCCCTCTTCTaGACCCAACCTTCTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEYSPLF*TQPSFT Trigger: TGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATA...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCAAAGGGTTCTTTTGCATCATCTaGCCCTCCACCAAGGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGRHSLLWKVSAPSTKGFFCII*PSTKAF Trigger: AAACGCCTTGGTGGAGGGCCAGATGATGCAAAAGAA...CCCTTTGGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR TCA 90 bp | CTCCATTACTTTCTGCCAGACTATCCTCTCACATCCATCCCTTGGCACTGGGTAACATCATTTCATACATaGCAACACCTAAGCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LHYFLPDYPLTSIPWHWVTSFHT*QHLSPT Trigger: GGTGGGGCTTAGGTGTTGTCATGTATGAAATGATGT...TACCCAGTGCCAAGGGATGGATGTGAGAGGATAGTCTGGCAGAAAGTAATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCACATCCATCCCTTGGCACTGGGTAGTTGGGGATGCTCTCATTTCAGCTTCAGTAAGAGTGTGTaGCACTTCATCCTTTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHIHPLALGSWGCSHFSFSKSV*HFILCN Trigger: ATTGCAAAGGATGAAGTGGCACACACTCTTACTGAA...GCTGAAATGAGAGCATCCCCAACTACCCAGTGCCAAGGGATGGATGTGAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR TCA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAAGTTTCAGATGTTACTTaGGGCTTAAAAGGAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEVSDVT*GLKGGT Trigger: TGTACCTCCTTTTAAGCCTCAAGTAACATCTGAAAC...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CCA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGTTAAAAATGGATGTCTaGTGTTCTTTAGTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDPAVSEGKKHVAPARSQLKMDV*CSLVLC Trigger: GCAGAGTACTAAAGAACACCAGACATCCATTTTTAA...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CCA 90 bp | AGACAAAACAAAAGAAGCTGTGTGCTTAGTGTACAGTGTCTGCTCCCTCTGAGGTTCTTTTGCATCATCTaGCCCTCCACCAAGGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQNKRSCVLSVQCLLPLRFFCII*PSTKAF Trigger: AAACGCCTTGGTGGAGGGCCAGATGATGCAAAAGAA...CCTCAGAGGGAGCAGACACTGTACACTAAGCACACAGCTTCTTTTGTTTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR TCA 90 bp | AGACAAAACAAAAGAAGCTGTGTGCTTAGTGTACAGTGTCTGCTCCCTCTGAGGTATTCTCCCCTCTTCTaGACCCAACCTTCTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQNKRSCVLSVQCLLPLRYSPLF*TQPSFT Trigger: TGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATA...CCTCAGAGGGAGCAGACACTGTACACTAAGCACACAGCTTCTTTTGTTTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR TCA 90 bp | AGGAGAAAGATGAGGTTTGCATACATGTCCCCTCTCAGTGAGAAATGTTTGGGTCCACTGAGAAGTTGTTaGGGGGATAAGGTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRKMRFAYMSPLSEKCLGPLRSC*GDKVSP Trigger: TGGACTTACCTTATCCCCTCAACAACTTCTCAGTGG...ACCCAAACATTTCTCACTGAGAGGGGACATGTATGCAAACCTCATCTTTCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR GCA 90 bp | AACAATGTACCTAGAATCAGTGTATCTCATTTAGCCTTCACTGCTAGGGAAAACATCCTCTCCTCCTCTTaGCTCTGCAATCGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNVPRISVSHLAFTARENILSSS*LCNRSA Trigger: AGCCGACCGATTGCAGAGGCAAGAGGAGGAGAGGAT...GTTTTCCCTAGCAGTGAAGGCTAAATGAGATACACTGATTCTAGGTACATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR GCA 90 bp | GGACTGGTAGAGATGTCCAGGAATCAGTCTCAGGCAAAGTCTAAGATGACAGTGTGTCTTCATGGTAGCTaGATCTGTGATCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVEMSRNQSQAKSKMTVCLHGS*ICDPFF Trigger: AAAGAAGGGATCACAGATGCAGCTACCATGAAGACA...CACTGTCATCTTAGACTTTGCCTGAGACTGATTCCTGGACATCTCTACCAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR GCA 90 bp | TTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGACTATCCACCATAGAAACGTGTaGGGTCCTCAGAGAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: FLIIIWVSAFSITFCQTIHHRNV*GPQRTL Trigger: GAGTGTTCTCTGAGGACCGCACACGTTTCTATGGTG...GATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR TCA 90 bp | CATTGTCAATGTCCCCTCATTAATCTTCACAAAGTATCCTTGGCCAAGGTCATGCTGACATTTTGCCACTaGGAAGTTGTTGAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HCQCPLINLHKVSLAKVMLTFCH*EVVEGI Trigger: TATCCCCTCAACAACTTCTCAGTGGCAAAATGTCAG...CATGACCTTGGCCAAGGATACTTTGTGAAGATTAATGAGGGGACATTGACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR TCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGCTGACATTTTGCCACTaGGAAGTTGTTGAGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NMSQTTNLQGGDSMTNSELTFCH*EVVEGI Trigger: TATCCCCTCAACAACTTCTCAGTGGCAAAATGTCAG...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR TCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGACATCATTTCATACATaGCAACACCTAAGCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NMSQTTNLQGGDSMTNSETSFHT*QHLSPT Trigger: GGTGGGGCTTAGGTGTTGTCATGTATGAAATGATGT...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR GCA 90 bp | TGTTCACCTTGGTGTATAGATTTTGGCGACAGCAGGATCATTATACTGTCTACACCTCATGATTTCTTTTaGATCATCTGGCCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSPWCIDFGDSRIIILSTPHDFF*IIWPST Trigger: GGTGGAGGGCCAGATGATGCAAAAGAAATCATGAGG...TGTAGACAGTATAATGATCCTGCTGTCGCCAAAATCTATACACCAAGGTGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CCA 90 bp | GCTTTGATCCTTGGACGTCATAGTCTGCTTTGGAAAGTGTCAGCTCCTAGCACCAAACGGTCTTTTGTCTaGAAGGAATATTTCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALILGRHSLLWKVSAPSTKRSFV*KEYFKD Trigger: ATCCTTGAAATATTCCTTCCAGACAAAAGACCGTTT...GGTGCTAGGAGCTGACACTTTCCAAAGCAGACTATGACGTCCAAGGATCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR TCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGTCTCCTTATAGCCTATaGATGAGCCATCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NMSQTTNLQGGDSMTNSESPYSL*MSHLSS Trigger: TGAAGACAGATGGCTCATTCATAGGCTATAAGGAGA...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACATCGTCTTTCTTTTATaGTGGGTTGTAGACGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RFLEVTSHPVGHKRKDINIVFLL*WVVDAS Trigger: GGATGCGTCTACAACCCATCATAAAAGAAAGACGAT...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR TCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGATCGTCTTTCTTTTATaGTGGGTTGTAGACGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NMSQTTNLQGGDSMTNSEIVFLL*WVVDAS Trigger: GGATGCGTCTACAACCCATCATAAAAGAAAGACGAT...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR GCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGTGTCTTCATGGTAGCTaGATCTGTGATCCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NMSQTTNLQGGDSMTNSECLHGS*ICDPFF Trigger: AAAGAAGGGATCACAGATGCAGCTACCATGAAGACA...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 72 bp | TCATTTTGCCGAGTAGAGTTCATTTCTCATCATCATTaGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFCRVEFISHHH*GLSFLHYFLPD Trigger: GTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAATGAACTCTACTCGGCAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CCA 90 bp | AGACAAAACAAAAGAAGCTGTGTGCTTAGTGTACAGTGTCTGCTCCCTCTGAGGTTAAAAATGGATGTCTaGTGTTCTTTAGTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RQNKRSCVLSVQCLLPLRLKMDV*CSLVLC Trigger: GCAGAGTACTAAAGAACACCAGACATCCATTTTTAA...CCTCAGAGGGAGCAGACACTGTACACTAAGCACACAGCTTCTTTTGTTTTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR TCA 90 bp | AGAGTTCATTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCGTTTCAGATGTTACTTaGGGCTTAAAAGGAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RVHFSSSFGSQLSPLLSAVSDVT*GLKGGT Trigger: TGTACCTCCTTTTAAGCCTCAAGTAACATCTGAAAC...GGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAATGAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR GCA 90 bp | AAGGAAAGAATTCTTGAACTCAAAGCCAAGAACCCACCTGTAGTGACACTCAGGATAGTATTTTCCACTTaGCTTCTCTCGAACCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KERILELKAKNPPVVTLRIVFST*LLSNQN Trigger: ATTTTGGTTCGAGAGAAGGCAAGTGGAAAATACTAT...CCTGAGTGTCACTACAGGTGGGTTCTTGGCTTTGAGTTCAAGAATTCTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR GCA 90 bp | AATATGTCACAGACTACAAATCTACAGGGAGGTGACTCGATGACCAATTCAGAGATAGTATTTTCCACTTaGCTTCTCTCGAACCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NMSQTTNLQGGDSMTNSEIVFST*LLSNQN Trigger: ATTTTGGTTCGAGAGAAGGCAAGTGGAAAATACTAT...CTCTGAATTGGTCATCGAGTCACCTCCCTGTAGATTTGTAGTCTGTGACATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| 3UTR CAA 72 bp | ACTTCCTATTGTGTGAATACTTGTGATGTGTTCATTTaGCCGAGTAGAGTTCATTTCTCATCATCATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSYCVNTCDVFI*PSRVHFSSSFG Trigger: CCCAAATGATGATGAGAAATGAACTCTACTCGGCAAAATGAACACATCACAAGTATTCACACAATAGGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS GCA 90 bp | TTATCAATCTGTGAGGTTGGGCTACAATTCATCCTCTCCTCCTCTTaGCTCTGCAATCGGTCGGCTACGGCTTGGATAGCTTCCGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSICEVGLQFILSSS*LCNRSATAWIASVH Trigger: GTGGACGGAAGCTATCCAAGCCGTAGCCGACCGATTGCAGAGGCAAGAGGAGGAGAGGATGAATTGTAGCCCAACCTCACAGATTGATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019843.15 ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CAA 90 bp | TGCCTTAGGAAAATGCCCTTTACACCCCAGCAGTCCCAGCGGCCAGCCACTGCCCATAGTATTTTCCACTaGCCTTCTCTCGAACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLRKMPFTPQQSQRPATAHSIFH*PSLEPK Trigger: TTTTGGTTCGAGAGAAGGCAAGTGGAAAATACTATG...GGCAGTGGCTGGCCGCTGGGACTGCTGGGGTGTAAAGGGCATTTTCCTAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CAA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACCATCCTCTCCTCCTCTaGCCTCTGCAATCGGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFLEVTSHPVGHKRKDINHPLLL*PLQSVG Trigger: GCCGACCGATTGCAGAGGCAAGAGGAGGAGAGGATG...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | GGAGACCCTGCAGTTAGTGAGGGAAAGAAGCATGTGGCCCCTGCAAGAAGTCAGTATCAATCTGTGAGGTaGGGCTACAATTCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GDPAVSEGKKHVAPARSQYQSVR*GYNSSS Trigger: AGAGGATGAATTGTAGCCCAACCTCACAGATTGATA...CTGACTTCTTGCAGGGGCCACATGCTTCTTTCCCTCACTAACTGCAGGGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCATTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCCATCCTCTCCTCCTCTaGCCTCTGCAATCGGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVHFSSSFGSQLSPLLSAHPLLL*PLQSVG Trigger: GCCGACCGATTGCAGAGGCAAGAGGAGGAGAGGATG...GGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAATGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | CACCTCGGTTCTACTTCTGCCTTTCCACTGACATCTGGTGGAGGGTGTAAGGAAGGAGGTACAAGCTTTTaGTCATATACATCTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLGSTSAFPLTSGGGCKEGGTSF*SYTSCQ Trigger: CTGGCAAGATGTATATGACAAAAAGCTTGTACCTCC...TTCCTTACACCCTCCACCAGATGTCAGTGGAAAGGCAGAAGTAGAACCGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CAA 90 bp | ACTGTAAGAGCGAGGACTGGTAGAGATGTCCAGGAATCAGTCTCAGGCAAAGTCTATCAATCTGTGAGGTaGGGCTACAATTCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVRARTGRDVQESVSGKVYQSVR*GYNSSS Trigger: AGAGGATGAATTGTAGCCCAACCTCACAGATTGATA...GACTTTGCCTGAGACTGATTCCTGGACATCTCTACCAGTCCTCGCTCTTACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS TCA 90 bp | GGTTGTAGACGCATCCATCTCTTCTTCTCCTATATTATCAATCTGTaGGGTTGGGCTACAATTCATCCTCTCCTCCTCTTGCCTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GCRRIHLFFSYIINL*GWATIHPLLLLPLQ Trigger: TTGCAGAGGCAAGAGGAGGAGAGGATGAATTGTAGCCCAACCTCACAGATTGATAATATAGGAGAAGAAGAGATGGATGCGTCTACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019843.15 ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS TCA 90 bp | GGGGATAAGGTAAGTCCACATCTTGAGGTTTCTCCTTATAGCCTATaGATGAGCCATCTGTCTTCAAAAGGAAGTATCTTGGCCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GDKVSPHLEVSPYSL*MSHLSSKGSILASS Trigger: ACTGGAGGCCAAGATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGCTATAAGGAGAAACCTCAAGATGTGGACTTACCTTATCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019843.15 ENSMUST00000111159.2 ENSMUST00000111160.9 |
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| CDS-3UTR CAA 90 bp | AGACAAAACAAAAGAAGCTGTGTGCTTAGTGTACAGTGTCTGCTCCCTCTGAGGAACACAAACGGTCTTTaGTCTGGAAGGAATATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQNKRSCVLSVQCLLPLRNTNGL*SGRNIS Trigger: TGAAATATTCCTTCCAGACAAAAGACCGTTTGTGTT...CCTCAGAGGGAGCAGACACTGTACACTAAGCACACAGCTTCTTTTGTTTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | CATTGTCAATGTCCCCTCATTAATCTTCACAAAGTATCCTTGGCCAAGGTCATGGGAGGTACAAGCTTTTaGTCATATACATCTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HCQCPLINLHKVSLAKVMGGTSF*SYTSCQ Trigger: CTGGCAAGATGTATATGACAAAAAGCTTGTACCTCC...CATGACCTTGGCCAAGGATACTTTGTGAAGATTAATGAGGGGACATTGACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACATCAAATTCTCCAACTaGAGATCACGGTACACAATC | + |
|
Preference number: 5 (lower is better) Translates to: RFLEVTSHPVGHKRKDINIKFSN*RSRYTI Trigger: GATTGTGTACCGTGATCTCAAGTTGGAGAATTTGAT...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTTGGAAGTTACTTCACACCCTGTGGGTCATAAACGTAAGGACATAAACTGTTTCAGATGTTACTaGAGGCTTAAAAGGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RFLEVTSHPVGHKRKDINCFRCY*RLKRRY Trigger: GTACCTCCTTTTAAGCCTCAAGTAACATCTGAAACA...GTTTATGTCCTTACGTTTATGACCCACAGGGTGTGAAGTAACTTCCAAGAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGACTATCATCAAATTCTCCAACTaGAGATCACGGTACACAATC | + |
|
Preference number: 5 (lower is better) Translates to: FLIIIWVSAFSITFCQTIIKFSN*RSRYTI Trigger: GATTGTGTACCGTGATCTCAAGTTGGAGAATTTGAT...GATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGACTATCTGTTTCAGATGTTACTaGAGGCTTAAAAGGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FLIIIWVSAFSITFCQTICFRCY*RLKRRY Trigger: GTACCTCCTTTTAAGCCTCAAGTAACATCTGAAACA...GATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTCATCATCATTTGGGTCTCAGCTTTCTCCATTACTTTCTGCCAGACTATCAACACAAACGGTCTTTaGTCTGGAAGGAATATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLIIIWVSAFSITFCQTINTNGL*SGRNIS Trigger: TGAAATATTCCTTCCAGACAAAAGACCGTTTGTGTT...GATAGTCTGGCAGAAAGTAATGGAGAAAGCTGAGACCCAAATGATGATGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS CAA 72 bp | CTCCTCCTCTTGCCTCTGCAATCGGTCGGCTACGGCTaGGATAGCTTCCGTCCACTCTTCTCTTTCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLLPLQSVGYG*DSFRPLFSFLW Trigger: CCAGAGGAAAGAGAAGAGTGGACGGAAGCTATCCAAGCCGTAGCCGACCGATTGCAGAGGCAAGAGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019843.15 ENSMUST00000111159.2 ENSMUST00000111160.9 |
||
| CDS CAA 90 bp | ATTCATCCTCTCCTCCTCTTGCCTCTGCAATCGGTCGGCTACGGCTaGGATAGCTTCCGTCCACTCTTCTCTTTCCTCTGGTGTATCTAC | + |
|
Preference number: 6 (lower is better) Translates to: IHPLLLLPLQSVGYG*DSFRPLFSFLWCIY Trigger: GTAGATACACCAGAGGAAAGAGAAGAGTGGACGGAAGCTATCCAAGCCGTAGCCGACCGATTGCAGAGGCAAGAGGAGGAGAGGATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019843.15 ENSMUST00000111159.2 ENSMUST00000111160.9 |
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