Pregenerated sensors for AKT1S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011096Ensembl transcript IDs: ENSMUST00000054343.15, ENSMUST00000107880.9, ENSMUST00000107882.8, ENSMUST00000107885.8, ENSMUST00000127783.2, ENSMUST00000136232.2, ENSMUST00000141311.8, ENSMUST00000142880.3, ENSMUST00000150335.2, ENSMUST00000208384.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGGCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCCGCGAGTCAAGGCTGTaGGGGCAAAGCTTCGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: RLAGNSSRHWLSSGSSRSRESRL*GQSFVC Trigger: GCAAACGAAGCTTTGCCCGCACAGCCTTGACTCGCG...GCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCTGCGCGAGTCAAGGCTGTaGGGGCAAAGCTTCGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: AGGQLFPTLAEQRQLPQLRESRL*GQSFVC Trigger: GCAAACGAAGCTTTGCCCGCACAGCCTTGACTCGCG...CAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAACTTCCCGACACTGGCTaGGCAGCGGCAGCTCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: GTYRERQTREGPRLSPGELPDTG*AAAAPA Trigger: TGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAG...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCAGGCTTCCCGACACTGGCTaGGCAGCGGCAGCTCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: RGTQTVPWGTGIQLSGLRLPDTG*AAAAPA Trigger: TGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAG...CCTGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAAGCCTCGGGCCAATTCTaGGTTAGGGAGGGCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GTYRERQTREGPRLSPGEASGQF*VREGLA Trigger: GGCCAAGCCCTCCCTAACCCAGAATTGGCCCGAGGC...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGTGGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGCGCGAGTCAAGGCTGTaGGGGCAAAGCTTCGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: AVEPIGSVRPERDPDCPLRESRL*GQSFVC Trigger: GCAAACGAAGCTTTGCCCGCACAGCCTTGACTCGCG...CAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCCACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAAAACTCTTCCCGACACTaGCTGAGCAGCGGCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GTYRERQTREGPRLSPGENSSRH*LSSGSS Trigger: GGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTT...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCAGGAACTCTTCCCGACACTaGCTGAGCAGCGGCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RGTQTVPWGTGIQLSGLRNSSRH*LSSGSS Trigger: GGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTT...CCTGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCCTTTTAAGGCACCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCAACTCTTCCCGACACTaGCTGAGCAGCGGCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: EGLLRHLLGSGDRKLVLSNSSRH*LSSGSS Trigger: GGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTT...GGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGGTGCCTTAAAAGGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCAGCCTCGGGCCAATTCTaGGTTAGGGAGGGCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: REGPRLSPGEPGYNCQDSASGQF*VREGLA Trigger: GGCCAAGCCCTCCCTAACCCAGAATTGGCCCGAGGC...TGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR CAA 90 bp | TGTAAGAAATTAAAGGCCTCGGGCCAATTCTGGGTTAGGGAGGGCTaGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACT | + |
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Preference number: 2 (lower is better) Translates to: CKKLKASGQFWVREG*ATLPGGRDQSGRGT Trigger: AGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAAGCCCTCCCTAACCCAGAATTGGCCCGAGGCCTTTAATTTCTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR GCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAAAAAGAATTGTTCTCTTaGTGGGCCGAGAGGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GTYRERQTREGPRLSPGEKELFS*WAERQW Trigger: CCACTGCCTCTCGGCCCAGCAAGAGAACAATTCTTT...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTTTGATGGACAGGCTGAAAGAATTGTTCTCTTaGTGGGCCGAGAGGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GQEAGTVLGTGQVLMDRLKELFS*WAERQW Trigger: CCACTGCCTCTCGGCCCAGCAAGAGAACAATTCTTT...CAGCCTGTCCATCAAAACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR CCA 72 bp | CTGAGCAGCGGCAGCTCCCGCAGCTGGGCTCCGCCCTaGGGCCGCGAGTCAAGGCTGTGCGGGCAAAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LSSGSSRSWAPP*GRESRLCGQSF Trigger: GAAGCTTTGCCCGCACAGCCTTGACTCGCGGCCCCAGGGCGGAGCCCAGCTGCGGGAGCTGCCGCTGCTCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR TCA 72 bp | CTGGAAGGCTGGCGGGCAACTCTTCCCGACACTGGCTaGGCAGCGGCAGCTCCCGCAGCTGGGCTCCGCCCT | + |
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Preference number: 3 (lower is better) Translates to: LEGWRATLPDTG*AAAAPAAGLRP Trigger: AGGGCGGAGCCCAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGCCTTCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR CCA 72 bp | AACTCTGGAAGGCTGGCGGGCAACTCTTCCCGACACTaGCTGAGCAGCGGCAGCTCCCGCAGCTGGGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: NSGRLAGNSSRH*LSSGSSRSWAP Trigger: CGGAGCCCAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGCCTTCCAGAGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCGAAAGAATTGTTCTCTaGCTGGGCCGAGAGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: RLAGNSSRHWLSSGSSRSERIVL*LGREAV Trigger: CACTGCCTCTCGGCCCAGCAAGAGAACAATTCTTTC...GCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR CCA 72 bp | GGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTaGGGAACCGGGATACAATTGTCAGGACTCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: GASDQRGTQTVP*GTGIQLSGLRQ Trigger: TTGCCTGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CAA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAAGAAAGAATTGTTCTCTaGCTGGGCCGAGAGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GTYRERQTREGPRLSPGEERIVL*LGREAV Trigger: CACTGCCTCTCGGCCCAGCAAGAGAACAATTCTTTC...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR TCA 72 bp | CGGGCAAAGCTTCGTTTGCTAGGCAAGAAACAGAGTTaGCCCTTGGAGCGTTTAGAACCGGCCCCGCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: RAKLRLLGKKQS*PLERLEPAPPN Trigger: GTTGGGCGGGGCCGGTTCTAAACGCTCCAAGGGTCAACTCTGTTTCTTGCCTAGCAAACGAAGCTTTGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR-3UTR CAA 90 bp | GGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTTTGATGGACAGGCTGGAAAGAATTGTTCTCTaGCTGGGCCGAGAGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GQEAGTVLGTGQVLMDRLERIVL*LGREAV Trigger: CACTGCCTCTCGGCCCAGCAAGAGAACAATTCTTTC...CAGCCTGTCCATCAAAACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | CAGCGGCAGCTCCCGCAGCTGGGCTCCGCCCTGGGGCCGCGAGTCAAGGCTGTGGCTGGGCGGCTGTGGTaGTGGTGGGGGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QRQLPQLGSALGPRVKAVAGRLW*WWGTRR Trigger: CCTCCTGGTCCCCCACCAGCACCACAGCCGCCCAGC...CACAGCCTTGACTCGCGGCCCCAGGGCGGAGCCCAGCTGCGGGAGCTGCCGCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CAGCGGCAGCTCCCGCAGCTGGGCTCCGCCCTGGGGCCGCGAGTCAAGGCTGTGCAGGGCTGGCCGAGGTaGTGGACTAGGAGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QRQLPQLGSALGPRVKAVQGWPR*WTRSRA Trigger: AGCCCTGCTCCTAGTCCACCACCTCGGCCAGCCCTG...CACAGCCTTGACTCGCGGCCCCAGGGCGGAGCCCAGCTGCGGGAGCTGCCGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCGCTGTGGCCGGGGGCTaGGGACAGGCTGTGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: RLAGNSSRHWLSSGSSRSAVAGG*GQAVGP Trigger: CGGTCCCACAGCCTGTCCCCAGCCCCCGGCCACAGC...GCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCGAGGTCGGGTGGCAGTaGCAGCCCTGTGCGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RLAGNSSRHWLSSGSSRSEVGWQ*QPCAPV Trigger: CACAGGCGCACAGGGCTGCCACTGCCACCCGACCTC...GCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCTGCGGCTGTGGTGCTGGTaGGGGACCAGGAGGTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: AGGQLFPTLAEQRQLPQLRLWCW*GTRRSG Trigger: ACCCGACCTCCTGGTCCCCCACCAGCACCACAGCCG...CAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCTGGGCTGGCCGAGGTGGTaGACTAGGAGCAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGGQLFPTLAEQRQLPQLGWPRW*TRSRAG Trigger: CCCAGCCCTGCTCCTAGTCCACCACCTCGGCCAGCC...CAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCGCCTGTGCGATGTCGTaGAGGCAGCGTCGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGACAMS*RQRRAA Trigger: GGCGGCCCGACGCTGCCTCCACGACATCGCACAGGC...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCGGTGGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGCTGTGGCCGGGGGCTaGGGACAGGCTGTGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: AVEPIGSVRPERDPDCPLAVAGG*GQAVGP Trigger: CGGTCCCACAGCCTGTCCCCAGCCCCCGGCCACAGC...CAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCCACCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCTGCCAGCGCGCGCATGCTaGCCGCTATTCGGTCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGGQLFPTLAEQRQLPQLPARAC*PLFGLG Trigger: ACCTAGACCGAATAGCGGCCAGCATGCGCGCGCTGG...CAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | GCGGTGGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGCTGGGCGGCTGTGGTaGTGGTGGGGGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AVEPIGSVRPERDPDCPLAGRLW*WWGTRR Trigger: CCTCCTGGTCCCCCACCAGCACCACAGCCGCCCAGC...CAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCCACCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCGGCTGGCCGAGGTGGTaGACTAGGAGCAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGGWPRW*TRSRAG Trigger: CCCAGCCCTGCTCCTAGTCCACCACCTCGGCCAGCC...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCCTCCCTGGCCAGGGCTaGCCGAGGTGGTGGACTAGG | + |
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Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGLPGQG*PRWWTR Trigger: CCTAGTCCACCACCTCGGCCAGCCCTGGCCAGGGAG...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATGCCTGTGCGATGTCGTaGAGGCAGCGTCGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: ERQTREGPRLSPGEPGYNACAMS*RQRRAA Trigger: GGCGGCCCGACGCTGCCTCCACGACATCGCACAGGC...ATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCGGTGGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGACCAGGAGGTCGGGTaGCAGTGGCAGCCCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: AVEPIGSVRPERDPDCPLDQEVG*QWQPCA Trigger: CGCACAGGGCTGCCACTGCCACCCGACCTCCTGGTC...CAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCCACCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCTTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGCAGGGCTGGCCGAGGTaGTGGACTAGGAGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AWPHSQEAGTNRVGELWKQGWPR*WTRSRA Trigger: AGCCCTGCTCCTAGTCCACCACCTCGGCCAGCCCTG...CTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCTCCGCCCTGGGGCCGCGAGTCAAGGCTGTGCGGGCAAAGCTTCGTTTGGACTTGGCATACTGCTaGGTAGGCAGGGCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LGSALGPRVKAVRAKLRLDLAYC*VGRAVA Trigger: GGCCACAGCCCTGCCTACCCAGCAGTATGCCAAGTC...CAAACGAAGCTTTGCCCGCACAGCCTTGACTCGCGGCCCCAGGGCGGAGCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR TCA 90 bp | GCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCTGGCCATTCTCCTCATCTaGCGATCGGGCTTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AGGQLFPTLAEQRQLPQLAILLI*RSGFCP Trigger: AGGACAGAAGCCCGATCGTCAGATGAGGAGAATGGC...CAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | AGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCAGGGCTGGGCGGCTGTGGTaGTGGTGGGGGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGTQTVPWGTGIQLSGLRAGRLW*WWGTRR Trigger: CCTCCTGGTCCCCCACCAGCACCACAGCCGCCCAGC...CCTGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | GCTTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCACCAGCGCGCGCATaGTGGCCGCTATTCGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: AWPHSQEAGTNRVGELWKAPARA*WPLFGL Trigger: TAGACCGAATAGCGGCCAGCATGCGCGCGCTGGTGC...CTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCGGTGGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGCAGGGCTGGCCGAGGTaGTGGACTAGGAGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AVEPIGSVRPERDPDCPLQGWPR*WTRSRA Trigger: AGCCCTGCTCCTAGTCCACCACCTCGGCCAGCCCTG...CAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCCACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTGCTGTGGCCGGGGGCTaGGGACAGGCTGTGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVAVAGG*GQAVGP Trigger: CGGTCCCACAGCCTGTCCCCAGCCCCCGGCCACAGC...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCTTCCCACAGTTCCTCTaGCCGCCCAGACGCCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGFPQFL*PPRRHP Trigger: CGGATGGCGTCTGGGCGGCCAGAGGAACTGTGGGAA...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107885.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCCTGTCCTCTTCTCCTTaGAGGCCCACACTGGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGLSSSP*RPTLAP Trigger: CGGTGCCAGTGTGGGCCTTCAAGGAGAAGAGGACAG...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAAAGCCCTGTGCGCCTGTaGGATGTCGTGGAGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTYRERQTREGPRLSPGESPVRL*DVVEAA Trigger: CGCTGCCTCCACGACATCGCACAGGCGCACAGGGCT...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTGCCTGTGCGATGTCGTaGAGGCAGCGTCGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVACAMS*RQRRAA Trigger: GGCGGCCCGACGCTGCCTCCACGACATCGCACAGGC...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGCCTTTTAAGGCACCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCAGCCCTGTGCGCCTGTaGGATGTCGTGGAGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGLLRHLLGSGDRKLVLSSPVRL*DVVEAA Trigger: CGCTGCCTCCACGACATCGCACAGGCGCACAGGGCT...GGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGGTGCCTTAAAAGGCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAATCTCCTCGCTCAGGCTaGCGTCGTCTGTGCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTYRERQTREGPRLSPGESPRSG*RRLCSP Trigger: CGGAGAGCACAGACGACGGCAGCCTGAGCGAGGAGA...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTGACCAGGAGGTCGGGTaGCAGTGGCAGCCCTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVDQEVG*QWQPCA Trigger: CGCACAGGGCTGCCACTGCCACCCGACCTCCTGGTC...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCACGGCTGTGGTGCTGGTaGGGGACCAGGAGGTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: REGPRLSPGEPGYNCQDSRLWCW*GTRRSG Trigger: ACCCGACCTCCTGGTCCCCCACCAGCACCACAGCCG...TGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTCGGCTGTGGTGCTGGTaGGGGACCAGGAGGTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVRLWCW*GTRRSG Trigger: ACCCGACCTCCTGGTCCCCCACCAGCACCACAGCCG...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTGGCTGGCCGAGGTGGTaGACTAGGAGCAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVGWPRW*TRSRAG Trigger: CCCAGCCCTGCTCCTAGTCCACCACCTCGGCCAGCC...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCACTCCCTGGCCAGGGCTaGCCGAGGTGGTGGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: REGPRLSPGEPGYNCQDSLPGQG*PRWWTR Trigger: CCTAGTCCACCACCTCGGCCAGCCCTGGCCAGGGAG...TGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTCTCCCTGGCCAGGGCTaGCCGAGGTGGTGGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVLPGQG*PRWWTR Trigger: CCTAGTCCACCACCTCGGCCAGCCCTGGCCAGGGAG...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| 3UTR CAA 72 bp | TTAAAGGCCTCGGGCCAATTCTGGGTTAGGGAGGGCTaGGCCACACTCCCAGGAGGCCGGGACCAATCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKASGQFWVREG*ATLPGGRDQSG Trigger: ACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAAGCCCTCCCTAACCCAGAATTGGCCCGAGGCCTTTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCGGGCAACTCTTCCCGACACTGGCTGAGCAGCGGCAGCTCCCGCAGCTGCATCCTCATCCATCATaGAGAGACCTCCATTATCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGGQLFPTLAEQRQLPQLHPHPS*RDLHYR Trigger: GCGATAATGGAGGTCTCTTCATGATGGATGAGGATG...CAGCTGCGGGAGCTGCCGCTGCTCAGCCAGTGTCGGGAAGAGTTGCCCGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR TCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAACTGTCCTCTTCTCCTTaGAGGCCCACACTGGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GTYRERQTREGPRLSPGELSSSP*RPTLAP Trigger: CGGTGCCAGTGTGGGCCTTCAAGGAGAAGAGGACAG...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCGCCATTCTCCTCATCTaGCGATCGGGCTTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGAILLI*RSGFCP Trigger: AGGACAGAAGCCCGATCGTCAGATGAGGAGAATGGC...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR TCA 90 bp | CCAGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTGGAAGTCGCTGGTATTaGGCCGCGGCCGCGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PERDPDCPLGNRDTIVRTGSRWY*AAAAED Trigger: ATCTTCCGCGGCCGCGGCTCAATACCAGCGACTTCC...AGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTGCACCAGCGCGCGCATaGTGGCCGCTATTCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PERDPDCPLGNRDTIVRTAPARA*WPLFGL Trigger: TAGACCGAATAGCGGCCAGCATGCGCGCGCTGGTGC...AGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCAGGGCACCAGCGCGCGCATaGTGGCCGCTATTCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RGTQTVPWGTGIQLSGLRAPARA*WPLFGL Trigger: TAGACCGAATAGCGGCCAGCATGCGCGCGCTGGTGC...CCTGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCAGGCCAGCGCGCGCATGCTaGCCGCTATTCGGTCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGTQTVPWGTGIQLSGLRPARAC*PLFGLG Trigger: ACCTAGACCGAATAGCGGCCAGCATGCGCGCGCTGG...CCTGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTAGATCCCCGAAGACCTaGGTGTCCTCAGCCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PERDPDCPLGNRDTIVRTRSPKT*VSSASR Trigger: GCGGGAGGCTGAGGACACCCAGGTCTTCGGGGATCT...AGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GAGGGCCTTTTAAGGCACCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCAGATCCCCGAAGACCTaGGTGTCCTCAGCCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLLRHLLGSGDRKLVLSRSPKT*VSSASR Trigger: GCGGGAGGCTGAGGACACCCAGGTCTTCGGGGATCT...GGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGGTGCCTTAAAAGGCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCATCTCCTCGCTCAGGCTaGCGTCGTCTGTGCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: REGPRLSPGEPGYNCQDSSPRSG*RRLCSP Trigger: CGGAGAGCACAGACGACGGCAGCCTGAGCGAGGAGA...TGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTTTGATGGACAGGCTGGAGGTCGGGTGGCAGTaGCAGCCCTGTGCGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQEAGTVLGTGQVLMDRLEVGWQ*QPCAPV Trigger: CACAGGCGCACAGGGCTGCCACTGCCACCCGACCTC...CAGCCTGTCCATCAAAACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTTTGATGGACAGGCTGGACCAGGAGGTCGGGTaGCAGTGGCAGCCCTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQEAGTVLGTGQVLMDRLDQEVG*QWQPCA Trigger: CGCACAGGGCTGCCACTGCCACCCGACCTCCTGGTC...CAGCCTGTCCATCAAAACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTGACTTGGCATACTGCTaGGTAGGCAGGGCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PERDPDCPLGNRDTIVRTDLAYC*VGRAVA Trigger: GGCCACAGCCCTGCCTACCCAGCAGTATGCCAAGTC...AGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGTCAGGACTCAAGATCCCCGAAGACCTaGGTGTCCTCAGCCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: REGPRLSPGEPGYNCQDSRSPKT*VSSASR Trigger: GCGGGAGGCTGAGGACACCCAGGTCTTCGGGGATCT...TGAGTCCTGACAATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| 3UTR CAA 72 bp | AACCTGAGCCAGCCAATCCCGGAAAGAATTGTTCTCTaGCTGGGCCGAGAGGCAGTGGCCTCTCGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSQPIPERIVL*LGREAVASRRP Trigger: TGGCCTGCGAGAGGCCACTGCCTCTCGGCCCAGCAAGAGAACAATTCTTTCCGGGATTGGCTGGCTCAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR TCA 90 bp | GGAACCTATAGGGAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAAGCCATTCTCCTCATCTaGCGATCGGGCTTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTYRERQTREGPRLSPGEAILLI*RSGFCP Trigger: AGGACAGAAGCCCGATCGTCAGATGAGGAGAATGGC...TTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTCCCTATAGGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTGACTTGGCATACTGCTaGGTAGGCAGGGCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVDLAYC*VGRAVA Trigger: GGCCACAGCCCTGCCTACCCAGCAGTATGCCAAGTC...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | GCTTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGTTCCGCTTCAGCTTCTaGAAGTCGCTGGTATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWPHSQEAGTNRVGELWKFRFSF*KSLVLS Trigger: GCTCAATACCAGCGACTTCCAGAAGCTGAAGCGGAA...CTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCTTCCGCTTCAGCTTCTaGAAGTCGCTGGTATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGFRFSF*KSLVLS Trigger: GCTCAATACCAGCGACTTCCAGAAGCTGAAGCGGAA...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR TCA 90 bp | GGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTTTGATGGACAGGCTGGGAAGTCGCTGGTATTaGGCCGCGGCCGCGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQEAGTVLGTGQVLMDRLGSRWY*AAAAED Trigger: ATCTTCCGCGGCCGCGGCTCAATACCAGCGACTTCC...CAGCCTGTCCATCAAAACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR GCA 90 bp | GGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTTTGATGGACAGGCTGTCTCCTCGCTCAGGCTaGCGTCGTCTGTGCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQEAGTVLGTGQVLMDRLSPRSG*RRLCSP Trigger: CGGAGAGCACAGACGACGGCAGCCTGAGCGAGGAGA...CAGCCTGTCCATCAAAACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTTTGATGGACAGGCTGCCAGCGCGCGCATGCTaGCCGCTATTCGGTCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQEAGTVLGTGQVLMDRLPARAC*PLFGLG Trigger: ACCTAGACCGAATAGCGGCCAGCATGCGCGCGCTGG...CAGCCTGTCCATCAAAACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCTGCCAGTATAAAATATaGAGAGGGCCAAGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LATLPGGRDQSGRGTLEGCQYKI*RGPRRR Trigger: ACGCCTCCTTGGCCCTCTCCATATTTTATACTGGCA...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107885.8 |
||
| CDS-3UTR TCA 90 bp | GAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATCATCCTCATCCATCATaGAGAGACCTCCATTATCGC | + |
|
Preference number: 4 (lower is better) Translates to: ERQTREGPRLSPGEPGYNHPHPS*RDLHYR Trigger: GCGATAATGGAGGTCTCTTCATGATGGATGAGGATG...ATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCCTTTTAAGGCACCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTTCCGCTTCAGCTTCTaGAAGTCGCTGGTATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLLRHLLGSGDRKLVLSFRFSF*KSLVLS Trigger: GCTCAATACCAGCGACTTCCAGAAGCTGAAGCGGAA...GGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGGTGCCTTAAAAGGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTTAGGGTCGGGGGACAGGAAGCTGGTACTGTCCTGGGTACAGGACAAGTTCATCCTCATCCATCATaGAGAGACCTCCATTATCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVRVGGQEAGTVLGTGQVHPHPS*RDLHYR Trigger: GCGATAATGGAGGTCTCTTCATGATGGATGAGGATG...AACTTGTCCTGTACCCAGGACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
||
| CDS CCA 90 bp | GGAGGTCGGGTGGCAGTGGCAGCCCTGTGCGCCTGTGCGATGTCGTaGAGGCAGCGTCGGGCCGCCTCTGCCAGGGCTCCGCGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRVAVAALCACAMS*RQRRAASARAPRPW Trigger: CCATGGCCGCGGAGCCCTGGCAGAGGCGGCCCGACGCTGCCTCCACGACATCGCACAGGCGCACAGGGCTGCCACTGCCACCCGACCTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 |
||
| CDS GCA 90 bp | CCTGTGCGCCTGTGCGATGTCGTGGAGGCAGCGTCGGGCCGCCTCTaGCAGGGCTCCGCGGCCATGGGCGGCATAGGCACAGGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVRLCDVVEAASGRL*QGSAAMGGIGTGSR Trigger: CCTGGACCCTGTGCCTATGCCGCCCATGGCCGCGGAGCCCTGGCAGAGGCGGCCCGACGCTGCCTCCACGACATCGCACAGGCGCACAGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 |
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| CDS GCA 90 bp | TGGGGGACCAGGAGGTCGGGTGGCAGTGGCAGCCCTGTGCGCCTGTaGGATGTCGTGGAGGCAGCGTCGGGCCGCCTCTGCCAGGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: WGTRRSGGSGSPVRL*DVVEAASGRLCQGS Trigger: GGAGCCCTGGCAGAGGCGGCCCGACGCTGCCTCCACGACATCGCACAGGCGCACAGGGCTGCCACTGCCACCCGACCTCCTGGTCCCCCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 |
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| CDS GCA 90 bp | GGCGGGGCGGCGGCGGTGGCGCTGCAGTCAGTAATACCAGCTCTGTaGCAGTGCGGGCCTGAAAGCGCTCGGCGGCCCCCACGACGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GGAAAVALQSVIPAL*QCGPESARRPPRRL Trigger: AAGCCGTCGTGGGGGCCGCCGAGCGCTTTCAGGCCCGCACTGGCACAGAGCTGGTATTACTGACTGCAGCGCCACCGCCGCCGCCCCGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 ENSMUST00000208384.2 |
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| CDS CCA 90 bp | TGGGCGGCTGTGGTGCTGGTGGGGGACCAGGAGGTCGGGTGGCAGTaGCAGCCCTGTGCGCCTGTGCGATGTCGTGGAGGCAGCGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: WAAVVLVGDQEVGWQ*QPCAPVRCRGGSVG Trigger: CCCGACGCTGCCTCCACGACATCGCACAGGCGCACAGGGCTGCCACTGCCACCCGACCTCCTGGTCCCCCACCAGCACCACAGCCGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 |
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| CDS CCA 90 bp | CAGGGCTGGGCGGCTGTGGTGCTGGTGGGGGACCAGGAGGTCGGGTaGCAGTGGCAGCCCTGTGCGCCTGTGCGATGTCGTGGAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QGWAAVVLVGDQEVG*QWQPCAPVRCRGGS Trigger: GCTGCCTCCACGACATCGCACAGGCGCACAGGGCTGCCACTGCCACCCGACCTCCTGGTCCCCCACCAGCACCACAGCCGCCCAGCCCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 |
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| CDS CCA 90 bp | CTGAAAGCGCTCGGCGGCCCCCACGACGGCTTCCCACAGTTCCTCTaGCCGCCCAGACGCCATCCGAGCCGTGCCCGTAGCCAGCATGGC | + |
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Preference number: 5 (lower is better) Translates to: LKALGGPHDGFPQFL*PPRRHPSRARSQHG Trigger: GCCATGCTGGCTACGGGCACGGCTCGGATGGCGTCTGGGCGGCCAGAGGAACTGTGGGAAGCCGTCGTGGGGGCCGCCGAGCGCTTTCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107882.8 |
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| CDS GCA 90 bp | GCGGCGGCGGTGGCGCTGCAGTCAGTAATACCAGCTCTGTGCCAGTaGGGGCCTGAAAGCGCTCGGCGGCCCCCACGACGGCTTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: AAAVALQSVIPALCQ*GPESARRPPRRLPT Trigger: TGTGGGAAGCCGTCGTGGGGGCCGCCGAGCGCTTTCAGGCCCGCACTGGCACAGAGCTGGTATTACTGACTGCAGCGCCACCGCCGCCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 ENSMUST00000208384.2 |
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| CDS GCA 90 bp | CGAAGACCTGGGTGTCCTCAGCCTCCCGCAGCACCAGCGCGCGCATaGTGGCCGCTATTCGGTCTAGGTCGGGCGAGGAGGGCGGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RRPGCPQPPAAPARA*WPLFGLGRARRAGH Trigger: ATGGCCCGCCCTCCTCGCCCGACCTAGACCGAATAGCGGCCAGCATGCGCGCGCTGGTGCTGCGGGAGGCTGAGGACACCCAGGTCTTCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 |
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| CDS CCA 90 bp | AGACCTGGGTGTCCTCAGCCTCCCGCAGCACCAGCGCGCGCATGCTaGCCGCTATTCGGTCTAGGTCGGGCGAGGAGGGCGGGCCATTCT | + |
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Preference number: 5 (lower is better) Translates to: RPGCPQPPAAPARAC*PLFGLGRARRAGHS Trigger: AGAATGGCCCGCCCTCCTCGCCCGACCTAGACCGAATAGCGGCCAGCATGCGCGCGCTGGTGCTGCGGGAGGCTGAGGACACCCAGGTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 |
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| CDS CCA 90 bp | AAGTCGCTGGTATTGAGCCGCGGCCGCGGAAGATCCCCGAAGACCTaGGTGTCCTCAGCCTCCCGCAGCACCAGCGCGCGCATGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KSLVLSRGRGRSPKT*VSSASRSTSARMLA Trigger: GGCCAGCATGCGCGCGCTGGTGCTGCGGGAGGCTGAGGACACCCAGGTCTTCGGGGATCTTCCGCGGCCGCGGCTCAATACCAGCGACTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 |
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| CDS-3UTR CAA 90 bp | CAGCGGCAGCTCCCGCAGCTGGGCTCCGCCCTGGGGCCGCGAGTCAAGGCTGTGTCTGTCCTCTTCTCCTaGAAGGCCCACACTGGCACC | + |
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Preference number: 5 (lower is better) Translates to: QRQLPQLGSALGPRVKAVSVLFS*KAHTGT Trigger: GGTGCCAGTGTGGGCCTTCAAGGAGAAGAGGACAGA...CACAGCCTTGACTCGCGGCCCCAGGGCGGAGCCCAGCTGCGGGAGCTGCCGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS CCA 90 bp | CTGAAAGCGCTCGGCGGCCCCCACGACGGCTTCCCACAGTTCCTCTaGCCGCCCAGACGCCATCCGAGCCCTTTTCCTCTCTCCGTTTCG | + |
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Preference number: 5 (lower is better) Translates to: LKALGGPHDGFPQFL*PPRRHPSPFPLSVS Trigger: CGAAACGGAGAGAGGAAAAGGGCTCGGATGGCGTCTGGGCGGCCAGAGGAACTGTGGGAAGCCGTCGTGGGGGCCGCCGAGCGCTTTCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107885.8 |
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| CDS TCA 90 bp | GGTGGCGCTGCAGTCAGTAATACCAGCTCTGTGCCAGTGCGGGCCTaGAAGCGCTCGGCGGCCCCCACGACGGCTTCCCACAGTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GGAAVSNTSSVPVRA*KRSAAPTTASHSSS Trigger: AGAGGAACTGTGGGAAGCCGTCGTGGGGGCCGCCGAGCGCTTTCAGGCCCGCACTGGCACAGAGCTGGTATTACTGACTGCAGCGCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 ENSMUST00000208384.2 |
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| CDS-3UTR CAA 90 bp | TTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGGCTGGAAGTCGCTGGTATaGAGCCGCGGCCGCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LATLPGGRDQSGRGTLEGWKSLV*SRGRGR Trigger: TCTTCCGCGGCCGCGGCTCAATACCAGCGACTTCCA...GCCTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CAA 90 bp | GCTTGGCCACACTCCCAGGAGGCCGGGACCAATCGGGTAGGGGAACTCTGGAAGTGGAAGTCGCTGGTATaGAGCCGCGGCCGCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: AWPHSQEAGTNRVGELWKWKSLV*SRGRGR Trigger: TCTTCCGCGGCCGCGGCTCAATACCAGCGACTTCCA...CTTCCAGAGTTCCCCTACCCGATTGGTCCCGGCCTCCTGGGAGTGTGGCCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS-3UTR CAA 90 bp | GAGCGTCAGACCAGAGAGGGACCCAGACTGTCCCCTGGGGAACCGGGATACAATTGGAAGTCGCTGGTATaGAGCCGCGGCCGCGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: ERQTREGPRLSPGEPGYNWKSLV*SRGRGR Trigger: TCTTCCGCGGCCGCGGCTCAATACCAGCGACTTCCA...ATTGTATCCCGGTTCCCCAGGGGACAGTCTGGGTCCCTCTCTGGTCTGACGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107885.8 |
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| CDS TCA 90 bp | GGCCATTCTCCTCATCTGACGATCGGGCTTCTGTCCTCTTCTCCTTaGAGGCCCACACTGGCACCGACACGGGCAGAGACTTGGCATACT | + |
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Preference number: 5 (lower is better) Translates to: GHSPHLTIGLLSSSP*RPTLAPTRAETWHT Trigger: AGTATGCCAAGTCTCTGCCCGTGTCGGTGCCAGTGTGGGCCTTCAAGGAGAAGAGGACAGAAGCCCGATCGTCAGATGAGGAGAATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000142880.3 |
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| CDS CCA 90 bp | GAGATGGTAGTGCCCCGCATTAACATGGCTTCCACCAAGCCGCTCTaGTTTGTCCTCGAGAAAAACGGCACAGTATTGGCTTCGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: EMVVPRINMASTKPL*FVLEKNGTVLASMP Trigger: TGGCATCGAAGCCAATACTGTGCCGTTTTTCTCGAGGACAAACCAGAGCGGCTTGGTGGAAGCCATGTTAATGCGGGGCACTACCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107885.8 |
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| CDS CCA 72 bp | GTGGCAGTGGCAGCCCTGTGCGCCTGTGCGATGTCGTaGAGGCAGCGTCGGGCCGCCTCTGCCAGGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VAVAALCACAMS*RQRRAASARAP Trigger: CGGAGCCCTGGCAGAGGCGGCCCGACGCTGCCTCCACGACATCGCACAGGCGCACAGGGCTGCCACTGCCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 |
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| CDS CCA 72 bp | CTCGGCGGCCCCCACGACGGCTTCCCACAGTTCCTCTaGCCGCCCAGACGCCATCCGAGCCGTGCCCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LGGPHDGFPQFL*PPRRHPSRARS Trigger: GCTACGGGCACGGCTCGGATGGCGTCTGGGCGGCCAGAGGAACTGTGGGAAGCCGTCGTGGGGGCCGCCGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107882.8 |
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| CDS GCA 72 bp | GGGTGTCCTCAGCCTCCCGCAGCACCAGCGCGCGCATaGTGGCCGCTATTCGGTCTAGGTCGGGCGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GCPQPPAAPARA*WPLFGLGRARR Trigger: CCTCCTCGCCCGACCTAGACCGAATAGCGGCCAGCATGCGCGCGCTGGTGCTGCGGGAGGCTGAGGACACCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 |
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| CDS CCA 72 bp | GCGGCTGTGGTGCTGGTGGGGGACCAGGAGGTCGGGTaGCAGTGGCAGCCCTGTGCGCCTGTGCGATGTCGT | + |
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Preference number: 6 (lower is better) Translates to: AAVVLVGDQEVG*QWQPCAPVRCR Trigger: ACGACATCGCACAGGCGCACAGGGCTGCCACTGCCACCCGACCTCCTGGTCCCCCACCAGCACCACAGCCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 |
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| CDS CCA 72 bp | TGTCCTCAGCCTCCCGCAGCACCAGCGCGCGCATGCTaGCCGCTATTCGGTCTAGGTCGGGCGAGGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: CPQPPAAPARAC*PLFGLGRARRA Trigger: CGCCCTCCTCGCCCGACCTAGACCGAATAGCGGCCAGCATGCGCGCGCTGGTGCTGCGGGAGGCTGAGGACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 |
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| CDS CCA 72 bp | CTCGGCGGCCCCCACGACGGCTTCCCACAGTTCCTCTaGCCGCCCAGACGCCATCCGAGCCAGCCGTATGGA | + |
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Preference number: 6 (lower is better) Translates to: LGGPHDGFPQFL*PPRRHPSQPYG Trigger: TCCATACGGCTGGCTCGGATGGCGTCTGGGCGGCCAGAGGAACTGTGGGAAGCCGTCGTGGGGGCCGCCGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141311.8 |
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| CDS CCA 72 bp | CTCGGCGGCCCCCACGACGGCTTCCCACAGTTCCTCTaGCCGCCCAGACGCCATCCGAGCCCTTTTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGGPHDGFPQFL*PPRRHPSPFPL Trigger: GAGAGGAAAAGGGCTCGGATGGCGTCTGGGCGGCCAGAGGAACTGTGGGAAGCCGTCGTGGGGGCCGCCGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107885.8 |
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| CDS GCA 72 bp | GTGGCGCTGCAGTCAGTAATACCAGCTCTGTGCCAGTaGGGGCCTGAAAGCGCTCGGCGGCCCCCACGACGG | + |
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Preference number: 6 (lower is better) Translates to: VALQSVIPALCQ*GPESARRPPRR Trigger: CCGTCGTGGGGGCCGCCGAGCGCTTTCAGGCCCGCACTGGCACAGAGCTGGTATTACTGACTGCAGCGCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000136232.2 ENSMUST00000141311.8 ENSMUST00000150335.2 ENSMUST00000208384.2 |
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| CDS CAA 72 bp | TTGAAGGCCCACACTGGCACCGACACGGGCAGAGACTaGGCATACTGCTGGGTAGGCAGGGCTGTGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: LKAHTGTDTGRD*AYCWVGRAVAG Trigger: CCCGGCCACAGCCCTGCCTACCCAGCAGTATGCCAAGTCTCTGCCCGTGTCGGTGCCAGTGTGGGCCTTCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000142880.3 |
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| CDS TCA 72 bp | GGGGCAGGTCCTGGAGGGTGGCATCCTCATCCATCATaGAGAGACCTCCATTATCGCTACCGCCCAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GAGPGGWHPHPS*RDLHYRYRPAA Trigger: AGCGGCTGGGCGGTAGCGATAATGGAGGTCTCTTCATGATGGATGAGGATGCCACCCTCCAGGACCTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000141311.8 |
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| CDS TCA 72 bp | CCTCATCTGACGATCGGGCTTCTGTCCTCTTCTCCTTaGAGGCCCACACTGGCACCGACACGGGCAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: PHLTIGLLSSSP*RPTLAPTRAET Trigger: AGTCTCTGCCCGTGTCGGTGCCAGTGTGGGCCTTCAAGGAGAAGAGGACAGAAGCCCGATCGTCAGATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000142880.3 |
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| CDS TCA 72 bp | GGGGCAGGTCCTGGAGGGTGGCATCCTCATCCATCATaGAGAGACCTGAGGGGGAGACAGGCCCTCCATTAT | + |
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Preference number: 6 (lower is better) Translates to: GAGPGGWHPHPS*RDLRGRQALHY Trigger: ATAATGGAGGGCCTGTCTCCCCCTCAGGTCTCTTCATGATGGATGAGGATGCCACCCTCCAGGACCTGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127783.2 |
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| CDS CAA 72 bp | TCCTCATCTGACGATCGGGCTTCTGTCCTCTTCTCCTaGAAGGCCCACACTGGCACCGACACGGGCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SSSDDRASVLFS*KAHTGTDTGRD Trigger: GTCTCTGCCCGTGTCGGTGCCAGTGTGGGCCTTCAAGGAGAAGAGGACAGAAGCCCGATCGTCAGATGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000142880.3 |
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| CDS CAA 90 bp | GGGCCATTCTCCTCATCTGACGATCGGGCTTCTGTCCTCTTCTCCTaGAAGGCCCACACTGGCACCGACACGGGCAGAGACTTGGCATAC | + |
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Preference number: 6 (lower is better) Translates to: GPFSSSDDRASVLFS*KAHTGTDTGRDLAY Trigger: GTATGCCAAGTCTCTGCCCGTGTCGGTGCCAGTGTGGGCCTTCAAGGAGAAGAGGACAGAAGCCCGATCGTCAGATGAGGAGAATGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 ENSMUST00000127783.2 ENSMUST00000142880.3 |
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| CDS TCA 72 bp | AATATTTCCGCTTCAGCTTCTGGAAGTCGCTGGTATTaGGCCGCGGCCGCGGAAGATCCCCGAAGACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: NISASASGSRWY*AAAAEDPRRPG Trigger: CCCAGGTCTTCGGGGATCTTCCGCGGCCGCGGCTCAATACCAGCGACTTCCAGAAGCTGAAGCGGAAATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054343.15 ENSMUST00000107880.9 ENSMUST00000107882.8 ENSMUST00000107885.8 |
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| CDS CCA 72 bp | ACGGCACAGTATTGGCTTCGATGCCAGTATAAAATATaGAGAGGGCCAAGGAGGCGTTCCCGAGCGATCACG | + |
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Preference number: 6 (lower is better) Translates to: TAQYWLRCQYKI*RGPRRRSRAIT Trigger: CGTGATCGCTCGGGAACGCCTCCTTGGCCCTCTCCATATTTTATACTGGCATCGAAGCCAATACTGTGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107885.8 |
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