Pregenerated sensors for AKT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001729Ensembl transcript IDs: ENSMUST00000001780.10, ENSMUST00000128300.9, ENSMUST00000130342.2, ENSMUST00000144550.9
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCTAAGAGCCACCACGCGGGAGCGGGTGCGGGAGGGCAGGGGCTCTCCTGTCACCAATGCAGAGGAGCGTaGAGCTGCCAGCCGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: AKSHHAGAGAGGQGLSCHQCRGA*SCQPLP Trigger: GGGCAGCGGCTGGCAGCTCCACGCTCCTCTGCATTG...GTGACAGGAGAGCCCCTGCCCTCCCGCACCCGCTCCCGCGTGGTGGCTCTTAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGTCCATGCGGGGCTTCTaGACTCGGCAATGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VPLSTSLEPWPSHPALGLSMRGF*TRQCRG Trigger: TCCTCTGCATTGCCGAGTCCAGAAGCCCCGCATGGA...CAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR-3UTR CCA 90 bp | TCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGAAGCAGCTGGTTTTCCTCCTGACCTaGCTGGGAGGTAGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: STSLEPWPSHPALGLKQLVFLLT*LGGRLL Trigger: CAGCAGCCTACCTCCCAGCCAGGTCAGGAGGAAAAC...CAGCTGCTTCAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGCTTCTGGTGCCTTCTTaGTGGACTTTGGCCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: VPLSTSLEPWPSHPALGLLLVPS*WTLALD Trigger: GTCCAGGGCCAAAGTCCAGCAAGAAGGCACCAGAAG...CAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR-3UTR CCA 90 bp | GTGACGGACAGCGGGAGAGGGAAAGCATCTAAAAGGACAAGTGCTAGGAGAAGGAGAAACATCCTCCCCTaGTCCTGGAGGCTGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VTDSGRGKASKRTSARRRRNILP*SWRLAR Trigger: CCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCT...CCTTCTCCTAGCACTTGTCCTTTTAGATGCTTTCCCTCTCCCGCTGTCCGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR CAA 90 bp | CCAATGGGGGCAGTGACGGGACCCACCCAGACCCATGAGCCCACATaGCACATGGTCGCGTCAGTCCTTAATAGTTTTCTACATGAATCT | + |
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Preference number: 2 (lower is better) Translates to: PMGAVTGPTQTHEPT*HMVASVLNSFLHES Trigger: AGATTCATGTAGAAAACTATTAAGGACTGACGCGACCATGTGCAATGTGGGCTCATGGGTCTGGGTGGGTCCCGTCACTGCCCCCATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR TCA 72 bp | AGGTGGCGGCCAGGGTGGACAGGCCAATGGGGGCAGTaGCGGGACCCACCCAGACCCATGAGCCCACATTGC | + |
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Preference number: 3 (lower is better) Translates to: RWRPGWTGQWGQ*RDPPRPMSPHC Trigger: GCAATGTGGGCTCATGGGTCTGGGTGGGTCCCGTCACTGCCCCCATTGGCCTGTCCACCCTGGCCGCCACCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR CCA 72 bp | GCTGCTGCCCACAGTAGAAACATCCTCCCCTGGTCCTaGAGGCTGGCAAGGTTCCTCCCCAGCGCATCCGAG | + |
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Preference number: 3 (lower is better) Translates to: AAAHSRNILPWS*RLARFLPSASE Trigger: CTCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGGCAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR CCA 72 bp | GGGTGCTTCTGGTGCCTTCTTGCTGGACTTTGGCCCTaGACCCTAGAGACAGGTGGCGGCCAGGGTGGACAG | + |
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Preference number: 3 (lower is better) Translates to: GCFWCLLAGLWP*TLETGGGQGGQ Trigger: CTGTCCACCCTGGCCGCCACCTGTCTCTAGGGTCCAGGGCCAAAGTCCAGCAAGAAGGCACCAGAAGCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR CCA 72 bp | CCCACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTaGCAAGGTTCCTCCCCAGCGCATCCGAGAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: PTVETSSPGPGG*QGSSPAHPRNK Trigger: TTTGTTTCTCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR CCA 72 bp | TGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTaGCCATCCCATCCAGCCCTAGGGCTGAAGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: WILVPLSTSLEP*PSHPALGLKQL Trigger: CAGCTGCTTCAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR TCA 72 bp | CCCAGCGCATCCGAGAAACAAAACATCAGGTTCAGATaGTCCATGCGGGGCTTCTGGACTCGGCAATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: PSASEKQNIRFR*SMRGFWTRQCR Trigger: TCTGCATTGCCGAGTCCAGAAGCCCCGCATGGATCATCTGAACCTGATGTTTTGTTTCTCGGATGCGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR TCA 72 bp | AACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTaGGCCCTGGCCATCCCATCCAGCCCTAGGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: NKLDSCSSVNLT*ALAIPSSPRAE Trigger: TTCAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR GCA 72 bp | CATCCGAGAAACAAAACATCAGGTTCAGATGATCCATaGGGGGCTTCTGGACTCGGCAATGCAGAGGAGCGT | + |
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Preference number: 3 (lower is better) Translates to: HPRNKTSGSDDP*GASGLGNAEER Trigger: ACGCTCCTCTGCATTGCCGAGTCCAGAAGCCCCGCATGGATCATCTGAACCTGATGTTTTGTTTCTCGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR CCA 72 bp | CGGGACCCACCCAGACCCATGAGCCCACATTGCACATaGTCGCGTCAGTCCTTAATAGTTTTCTACATGAAT | + |
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Preference number: 3 (lower is better) Translates to: RDPPRPMSPHCT*SRQSLIVFYMN Trigger: ATTCATGTAGAAAACTATTAAGGACTGACGCGACCATGTGCAATGTGGGCTCATGGGTCTGGGTGGGTCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR TCA 72 bp | AATAGTTTTCTACATGAATCTAATTGTTCTGGGCACTaGGGCCACATGTGTGGTCTCAAACTGGATGAAATA | + |
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Preference number: 3 (lower is better) Translates to: NSFLHESNCSGH*GHMCGLKLDEI Trigger: TATTTCATCCAGTTTGAGACCACACATGTGGCCTCAGTGCCCAGAACAATTAGATTCATGTAGAAAACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GTGCAGCAATGGCCAGCGTCTGGCCGGGAGGGGACAGGCCAGGGTGACGGACAGCGGAGAGCAGGGACTTaGCCTCAGGGCCGAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VQQWPASGREGTGQGDGQRRAGT*PQGRVC Trigger: GCACACTCGGCCCTGAGGCCAAGTCCCTGCTCTCCG...CTGTCCGTCACCCTGGCCTGTCCCCTCCCGGCCAGACGCTGGCCATTGCTGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | GCCAGGGTGGACAGGCCAATGGGGGCAGTGACGGGACCCACCCAGACCCATGAGAGGTGCCATCGTTCTTaGGGAGGAAGTAGCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ARVDRPMGAVTGPTQTHERCHRS*GGSSVA Trigger: GGCCACGCTACTTCCTCCTCAAGAACGATGGCACCT...CTCATGGGTCTGGGTGGGTCCCGTCACTGCCCCCATTGGCCTGTCCACCCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | CTCCCAGGGTACCCGCTAAGAGCCACCACGCGGGAGCGGGTGCGGGAGGGCAGGCTGGGGCTTGAAAGGTaGGCTCAGCTTCTTCTCATA | + |
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Preference number: 4 (lower is better) Translates to: LPGYPLRATTRERVREGRLGLER*AQLLLI Trigger: TATGAGAAGAAGCTGAGCCCACCTTTCAAGCCCCAG...CCTGCCCTCCCGCACCCGCTCCCGCGTGGTGGCTCTTAGCGGGTACCCTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | ATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCGCATCCGAGAAAGAGAACTGGGGGAAGTaGGGCCTCCGCTCACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ILPWSWRLARFLPSASEKENWGK*GLRSLS Trigger: GGACAGTGAGCGGAGGCCGCACTTCCCCCAGTTCTC...TTTCTCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | GCCAGGGTGGACAGGCCAATGGGGGCAGTGACGGGACCCACCCAGACCCATGAGTATTCCCCTCGTTTGTaGAGCCAGCCCTCCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: ARVDRPMGAVTGPTQTHEYSPRL*SQPSFT Trigger: TGTGAAGGAGGGCTGGCTGCACAAACGAGGGGAATA...CTCATGGGTCTGGGTGGGTCCCGTCACTGCCCCCATTGGCCTGTCCACCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | AAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCGCATCCGACACGGTGCTTGGGCTTaGCCAGGGACACCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: KHPPLVLEAGKVPPQRIRHGAWA*PGTPPS Trigger: AGATGGAGGTGTCCCTGGCCAAGCCCAAGCACCGTG...TCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GCCCACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCCTGCCACAGTCTGAATaGCGGTGGCCCATTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSRNILPWSWRLARFLPLPQSE*RWPILP Trigger: GGGAAGAATGGGCCACCGCCATTCAGACTGTGGCAG...GGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGTGGTCACACGGTGCTTaGGCTTGGCCAGGGACACCT | + |
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Preference number: 4 (lower is better) Translates to: VPLSTSLEPWPSHPALGLWSHGA*AWPGTP Trigger: AGGTGTCCCTGGCCAAGCCCAAGCACCGTGTGACCA...CAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | GCCCACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCGGATCTCCTCCATaGGGATCAGCTCGAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: AHSRNILPWSWRLARFLPSGSPP*GSARTA Trigger: AGCTGTTCGAGCTGATCCTCATGGAGGAGATCCGCT...GGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | ATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCGCATCCGAGAAACGAAGTCCGTTATCTTaGTGTGCCCGTCCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ILPWSWRLARFLPSASEKRSPLS*CARPCP Trigger: TGGACAAGGACGGGCACATCAAGATAACGGACTTCG...TTTCTCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GCTGCCCACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCCTGAGTTGTCACTaGGTGAGCCTGATCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: AAHSRNILPWSWRLARFLPLSCH*VSLIGS Trigger: ACTTCCGATCAGGCTCACCCAGTGACAACTCAGGGG...GAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | TCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGAAGCAGCTGCCACTGAGAAGTTGTTaGGTGGGGACTCTCGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: STSLEPWPSHPALGLKQLPLRSC*VGTLAD Trigger: ATCAGCGAGAGTCCCCACTCAACAACTTCTCAGTGG...CAGCTGCTTCAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | GTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGCTTCTTCCTGCCTCTTaGGTCCATCTGCCACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VPLSTSLEPWPSHPALGLLLPAS*VHLPQS Trigger: AGACTGTGGCAGATGGACTCAAGAGGCAGGAAGAAG...CAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | TCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGAAGCAGCTGTCACCTTCCCAAAGGTaGCCTTGCCCAGTAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: STSLEPWPSHPALGLKQLSPSQR*PCPVAS Trigger: TGAAGCTACTGGGCAAGGGCACCTTTGGGAAGGTGA...CAGCTGCTTCAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | GCTGCCCACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCATCGTCTCTTCTTCCTaGCTCTTGAGTCCATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: AAHSRNILPWSWRLARFLIVSSS*LLSPSA Trigger: GGCAGATGGACTCAAGAGGCAGGAAGAAGAGACGAT...GAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | CCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCGCATCCGAGAAACAAAACAGTGATGGTGATCATCTaGGCTGTGAACTCCTCATCG | + |
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Preference number: 4 (lower is better) Translates to: PGPGGWQGSSPAHPRNKTVMVII*AVNSSS Trigger: CGATGAGGAGTTCACAGCTCAGATGATCACCATCAC...TGTTTTGTTTCTCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | GTTCCTCCCCAGCGCATCCGAGAAACAAAACATCAGGTTCAGATGATCCATGCGGGCTGTGCCACTGGCTaGGTAGGAGAACTGGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VPPQRIRETKHQVQMIHAGCATG*VGELGE Trigger: TTCCCCCAGTTCTCCTACTCAGCCAGTGGCACAGCC...CGCATGGATCATCTGAACCTGATGTTTTGTTTCTCGGATGCGCTGGGGAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GCTGCCCACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCTCTGTCTTCATCAGCTaGCATTGTGCCACTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AAHSRNILPWSWRLARFLSVFIS*HCATEK Trigger: CTTCTCAGTGGCACAATGCCAGCTGATGAAGACAGA...GAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGCGCTCTCGAGACAGGTaGAAGAAGAGCTCGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: DTATNWILVPLSTSLEPWRSRDR*KKSSPP Trigger: CGGGGGCGAGCTCTTCTTCCACCTGTCTCGAGAGCG...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| 3UTR CAA 72 bp | GCAGTGACGGGACCCACCCAGACCCATGAGCCCACATaGCACATGGTCGCGTCAGTCCTTAATAGTTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: AVTGPTQTHEPT*HMVASVLNSFL Trigger: TAGAAAACTATTAAGGACTGACGCGACCATGTGCAATGTGGGCTCATGGGTCTGGGTGGGTCCCGTCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | GGGACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTAGAACCGGTGCTGCATaGTCTCCTTGGCATCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GTQQQTGFLFLCQPHLSPRTGAA*SPWHPR Trigger: CCGAGGATGCCAAGGAGATCATGCAGCACCGGTTCT...AGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GTGACGGACAGCGGGAGAGGGAAAGCATCTAAAAGGACAAGTGCTAGGAGAAGGAAGCAGAGGCGGTCGTaGGTCTGGAATGAGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: VTDSGRGKASKRTSARRRKQRRS*VWNEYL Trigger: CAAGTACTCATTCCAGACCCACGACCGCCTCTGCTT...CCTTCTCCTAGCACTTGTCCTTTTAGATGCTTTCCCTCTCCCGCTGTCCGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGGTCTCAGAGGTGACCTaGGGCTTGAAAGGTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DTATNWILVPLSTSLEPWVSEVT*GLKGGL Trigger: GAGCCCACCTTTCAAGCCCCAGGTCACCTCTGAGAC...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | GGGACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGTCGTGGGTCTGGAATaGGTACTTGAGGGCCGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GTQQQTGFLFLCQPHLSPVVGLE*VLEGRK Trigger: CTTACGGCCCTCAAGTACTCATTCCAGACCCACGAC...AGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR TCA 90 bp | CAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATCGTCCTTGTCCAGCATaGGGTTCTCCAGCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QQQTGFLFLCQPHLSPGHRPCPA*GSPASG Trigger: ACCTGAAGCTGGAGAACCTCATGCTGGACAAGGACG...ATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | CAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATCCTGCCACACGATGTTaGCAAAGAACCGGTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QQQTGFLFLCQPHLSPGHPATRC*QRTGAA Trigger: TGCAGCACCGGTTCTTTGCCAACATCGTGTGGCAGG...ATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | CAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATTCCCAAAGGTGCCCTTaGCCAGTAGCTTCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: QQQTGFLFLCQPHLSPGHSQRCP*PVASGT Trigger: AGTACCTGAAGCTACTGGGCAAGGGCACCTTTGGGA...ATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGGCCGTAAGGAAGGGATaGCTAGAGTTCTGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: DTATNWILVPLSTSLEPWAVRKG*LEFCRT Trigger: TGTCCTGCAGAACTCTAGGCATCCCTTCCTTACGGC...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | CAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATTTGGCAAAGAACCGGTaGTGCATGATCTCCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QQQTGFLFLCQPHLSPGHLAKNR*CMISLA Trigger: TGCCAAGGAGATCATGCAGCACCGGTTCTTTGCCAA...ATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR GCA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGTGTCCACACACTCCATaGTGTCATCTTGATCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: DTATNWILVPLSTSLEPWCPHTP*CHLDQA Trigger: CGCCTGATCAAGATGACAGCATGGAGTGTGTGGACA...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CCA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGGAGGAGGAAGTAGCGTaGCCGCCAGGTTTTAATATA | + |
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Preference number: 4 (lower is better) Translates to: DTATNWILVPLSTSLEPWEEEVA*PPGFNI Trigger: TATATTAAAACCTGGCGGCCACGCTACTTCCTCCTC...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | ATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCGCATCCGAGAAACCGGAGAGCAGGGACTaGGCCTCAGGGCCGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: ILPWSWRLARFLPSASEKPESRD*ASGPSV Trigger: CACACTCGGCCCTGAGGCCAAGTCCCTGCTCTCCGG...TTTCTCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GCCAGGGTGGACAGGCCAATGGGGGCAGTGACGGGACCCACCCAGACCCATGAGTCCTGCCACACGATGTaGGCAAAGAACCGGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ARVDRPMGAVTGPTQTHESCHTM*AKNRCC Trigger: GCAGCACCGGTTCTTTGCCAACATCGTGTGGCAGGA...CTCATGGGTCTGGGTGGGTCCCGTCACTGCCCCCATTGGCCTGTCCACCCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GTGCAGCAATGGCCAGCGTCTGGCCGGGAGGGGACAGGCCAGGGTGACGGACAGGTCTGGAATGAGTACTaGAGGGCCGTAAGGAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: VQQWPASGREGTGQGDGQVWNEY*RAVRKG Trigger: TCCCTTCCTTACGGCCCTCAAGTACTCATTCCAGAC...CTGTCCGTCACCCTGGCCTGTCCCCTCCCGGCCAGACGCTGGCCATTGCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GCCCACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCGAGGTGACCTGGGGCTaGAAAGGTGGGCTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: AHSRNILPWSWRLARFLPEVTWG*KGGLSF Trigger: GAAGCTGAGCCCACCTTTCAAGCCCCAGGTCACCTC...GGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | CCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCGCATCCGAGAAACAAAACAATGGTCACACGGTGCTaGGGCTTGGCCAGGGACACC | + |
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Preference number: 5 (lower is better) Translates to: PGPGGWQGSSPAHPRNKTMVTRC*GLARDT Trigger: GGTGTCCCTGGCCAAGCCCAAGCACCGTGTGACCAT...TGTTTTGTTTCTCGGATGCGCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | CACAGTAGAAACATCCTCCCCTGGTCCTGGAGGCTGGCAAGGTTCCTCCCCAGCTCCTTGATCCCCTCCTaGCACAGCCCGAAGTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: HSRNILPWSWRLARFLPSSLIPS*HSPKSV Trigger: AACGGACTTCGGGCTGTGCAAGGAGGGGATCAAGGA...GCTGGGGAGGAACCTTGCCAGCCTCCAGGACCAGGGGAGGATGTTTCTACTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | TCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGAAGCAGCTGATAGTGGCACCGTCCTaGATCCCCTCCTTGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: STSLEPWPSHPALGLKQLIVAPS*IPSLHS Trigger: GCTGTGCAAGGAGGGGATCAAGGACGGTGCCACTAT...CAGCTGCTTCAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GTTCCTCTGTCAACCTCACTTGAGCCCTGGCCATCCCATCCAGCCCTAGGGCTGTGTGCCACTGAGAAGTaGTTGAGTGGGGACTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: VPLSTSLEPWPSHPALGLCATEK*LSGDSR Trigger: GCGAGAGTCCCCACTCAACAACTTCTCAGTGGCACA...CAGCCCTAGGGCTGGATGGGATGGCCAGGGCTCAAGTGAGGTTGACAGAGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS CCA 90 bp | GCTTGGCCAGGGACACCTCCATCTCTTCAGCCCCTGAGTTGTCACTaGGTGAGCCTGATCGGAAGTCCATCGTCTCTTCTTCCTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AWPGTPPSLQPLSCH*VSLIGSPSSLLPAS Trigger: AGAGGCAGGAAGAAGAGACGATGGACTTCCGATCAGGCTCACCCAGTGACAACTCAGGGGCTGAAGAGATGGAGGTGTCCCTGGCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000144550.9 |
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| CDS TCA 90 bp | TCCATCGTCTCTTCTTCCTGCCTCTTGAGTCCATCTGCCACAGTCTaGATGGCGGTGGCCCATTCTTCCCGCTCCTCAGGCGTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SIVSSSCLLSPSATV*MAVAHSSRSSGVST Trigger: TGTGGAAACGCCTGAGGAGCGGGAAGAATGGGCCACCGCCATTCAGACTGTGGCAGATGGACTCAAGAGGCAGGAAGAAGAGACGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000130342.2 ENSMUST00000144550.9 |
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| CDS-3UTR CAA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGACACGGTGCTTGGGCTaGGCCAGGGACACCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: DTATNWILVPLSTSLEPWTRCLG*ARDTSI Trigger: GATGGAGGTGTCCCTGGCCAAGCCCAAGCACCGTGT...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GTTCCTCCCCAGCGCATCCGAGAAACAAAACATCAGGTTCAGATGATCCATGCGTGCTGCATGATCTCCTaGGCATCCTCGGAGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: VPPQRIRETKHQVQMIHACCMIS*ASSEPP Trigger: TGGGGGCTCCGAGGATGCCAAGGAGATCATGCAGCA...CGCATGGATCATCTGAACCTGATGTTTTGTTTCTCGGATGCGCTGGGGAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GTGACGGACAGCGGGAGAGGGAAAGCATCTAAAAGGACAAGTGCTAGGAGAAGGTCTTCAGCCCCTGAGTaGTCACTGGGTGAGCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: VTDSGRGKASKRTSARRRSSAPE*SLGEPD Trigger: ATCAGGCTCACCCAGTGACAACTCAGGGGCTGAAGA...CCTTCTCCTAGCACTTGTCCTTTTAGATGCTTTCCCTCTCCCGCTGTCCGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGTTCCCAAAGGTGCCCTaGCCCAGTAGCTTCAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: DTATNWILVPLSTSLEPWFPKVP*PSSFRY Trigger: GTACCTGAAGCTACTGGGCAAGGGCACCTTTGGGAA...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS-3UTR CAA 90 bp | GACACAGCAACAAACTGGATTCTTGTTCCTCTGTCAACCTCACTTGAGCCCTGGCCGAAGTCCGTTATCTaGATGTGCCCGTCCTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: DTATNWILVPLSTSLEPWPKSVI*MCPSLS Trigger: GGACAAGGACGGGCACATCAAGATAACGGACTTCGG...CCAGGGCTCAAGTGAGGTTGACAGAGGAACAAGAATCCAGTTTGTTGCTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001780.10 |
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| CDS CCA 90 bp | CTTGTAGCCAATAAAGGTGCCATCGTTCTTGAGGAGGAAGTAGCGTaGCCGCCAGGTTTTAATATATTCCCCTCGTTTGTGCAGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LVANKGAIVLEEEVA*PPGFNIFPSFVQPA Trigger: GGCTGGCTGCACAAACGAGGGGAATATATTAAAACCTGGCGGCCACGCTACTTCCTCCTCAAGAACGATGGCACCTTTATTGGCTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000130342.2 ENSMUST00000144550.9 |
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| CDS CAA 90 bp | TCCTGCCACACGATGTTGGCAAAGAACCGGTGCTGCATGATCTCCTaGGCATCCTCGGAGCCCCCACCGAGCCTCTGTGTAGGGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SCHTMLAKNRCCMIS*ASSEPPPSLCVGSF Trigger: GAAGGACCCTACACAGAGGCTCGGTGGGGGCTCCGAGGATGCCAAGGAGATCATGCAGCACCGGTTCTTTGCCAACATCGTGTGGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 |
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| CDS CAA 90 bp | TGCTTGGGCTTGGCCAGGGACACCTCCATCTCTTCAGCCCCTGAGTaGTCACTGGGTGAGCCTGATCGGAAGTCCATCGTCTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CLGLARDTSISSAPE*SLGEPDRKSIVSSS Trigger: GGAAGAAGAGACGATGGACTTCCGATCAGGCTCACCCAGTGACAACTCAGGGGCTGAAGAGATGGAGGTGTCCCTGGCCAAGCCCAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000144550.9 |
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| CDS TCA 72 bp | TCTTCTTCCTGCCTCTTGAGTCCATCTGCCACAGTCTaGATGGCGGTGGCCCATTCTTCCCGCTCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SSSCLLSPSATV*MAVAHSSRSSG Trigger: GCCTGAGGAGCGGGAAGAATGGGCCACCGCCATTCAGACTGTGGCAGATGGACTCAAGAGGCAGGAAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000130342.2 ENSMUST00000144550.9 |
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| CDS CAA 72 bp | TTGGCCAGGGACACCTCCATCTCTTCAGCCCCTGAGTaGTCACTGGGTGAGCCTGATCGGAAGTCCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: LARDTSISSAPE*SLGEPDRKSIV Trigger: GACGATGGACTTCCGATCAGGCTCACCCAGTGACAACTCAGGGGCTGAAGAGATGGAGGTGTCCCTGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000144550.9 |
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| CDS CAA 72 bp | ACGATGTTGGCAAAGAACCGGTGCTGCATGATCTCCTaGGCATCCTCGGAGCCCCCACCGAGCCTCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: TMLAKNRCCMIS*ASSEPPPSLCV Trigger: TACACAGAGGCTCGGTGGGGGCTCCGAGGATGCCAAGGAGATCATGCAGCACCGGTTCTTTGCCAACATCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 |
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| CDS CAA 72 bp | TACTCAAACTCGTTCATGGTCACACGGTGCTTGGGCTaGGCCAGGGACACCTCCATCTCTTCAGCCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: YSNSFMVTRCLG*ARDTSISSAPE Trigger: CTCAGGGGCTGAAGAGATGGAGGTGTCCCTGGCCAAGCCCAAGCACCGTGTGACCATGAACGAGTTTGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000144550.9 |
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| CDS GCA 72 bp | TACTTGAGGGCCGTAAGGAAGGGATGCCTAGAGTTCTaGAGGACACGGTTCTCAGTAAGCGTGTGGGCAACC | + |
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Preference number: 6 (lower is better) Translates to: YLRAVRKGCLEF*RTRFSVSVWAT Trigger: GGTTGCCCACACGCTTACTGAGAACCGTGTCCTGCAGAACTCTAGGCATCCCTTCCTTACGGCCCTCAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 |
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| CDS CCA 72 bp | GGGACACCTCCATCTCTTCAGCCCCTGAGTTGTCACTaGGTGAGCCTGATCGGAAGTCCATCGTCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GTPPSLQPLSCH*VSLIGSPSSLL Trigger: AAGAAGAGACGATGGACTTCCGATCAGGCTCACCCAGTGACAACTCAGGGGCTGAAGAGATGGAGGTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000144550.9 |
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| CDS TCA 72 bp | TCTTCATCAGCTGGCATTGTGCCACTGAGAAGTTGTTaGGTGGGGACTCTCGCTGATCCACATCCTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSAGIVPLRSC*VGTLADPHPEA Trigger: GGCCTCAGGATGTGGATCAGCGAGAGTCCCCACTCAACAACTTCTCAGTGGCACAATGCCAGCTGATGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000130342.2 ENSMUST00000144550.9 |
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| CDS GCA 72 bp | GTCTGGAATGAGTACTTGAGGGCCGTAAGGAAGGGATaGCTAGAGTTCTGCAGGACACGGTTCTCAGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: VWNEYLRAVRKG*LEFCRTRFSVS Trigger: GCTTACTGAGAACCGTGTCCTGCAGAACTCTAGGCATCCCTTCCTTACGGCCCTCAAGTACTCATTCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 |
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| CDS GCA 72 bp | TGGCCTTCTCTTTCACCAGAATCACCTTCCCAAAGGTaGCCTTGCCCAGTAGCTTCAGGTACTCAAACTCGT | + |
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Preference number: 6 (lower is better) Translates to: WPSLSPESPSQR*PCPVASGTQTR Trigger: ACGAGTTTGAGTACCTGAAGCTACTGGGCAAGGGCACCTTTGGGAAGGTGATTCTGGTGAAAGAGAAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000144550.9 |
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| CDS GCA 72 bp | TTGAAAGGTGGGCTCAGCTTCTTCTCATACACATCCTaGCACACGATGTTGGCAAAGAACCGGTGCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: LKGGLSFFSYTS*HTMLAKNRCCM Trigger: CATGCAGCACCGGTTCTTTGCCAACATCGTGTGGCAGGATGTGTATGAGAAGAAGCTGAGCCCACCTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 |
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| CDS CCA 72 bp | TCATCGAAATACCTGGTGTCAGTCTCAGAGGTGACCTaGGGCTTGAAAGGTGGGCTCAGCTTCTTCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: SSKYLVSVSEVT*GLKGGLSFFSY Trigger: GTATGAGAAGAAGCTGAGCCCACCTTTCAAGCCCCAGGTCACCTCTGAGACTGACACCAGGTATTTCGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 |
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| CDS CAA 72 bp | CTCAGCTTCTTCTCATACACATCCTGCCACACGATGTaGGCAAAGAACCGGTGCTGCATGATCTCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSFFSYTSCHTM*AKNRCCMISLA Trigger: TGCCAAGGAGATCATGCAGCACCGGTTCTTTGCCAACATCGTGTGGCAGGATGTGTATGAGAAGAAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 |
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| CDS GCA 72 bp | TCTCTTTCACCAGAATCACCTTCCCAAAGGTGCCCTTaGCCAGTAGCTTCAGGTACTCAAACTCGTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: SLSPESPSQRCP*PVASGTQTRSW Trigger: CCATGAACGAGTTTGAGTACCTGAAGCTACTGGGCAAGGGCACCTTTGGGAAGGTGATTCTGGTGAAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000144550.9 |
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| CDS CCA 72 bp | AATAAAGGTGCCATCGTTCTTGAGGAGGAAGTAGCGTaGCCGCCAGGTTTTAATATATTCCCCTCGTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: NKGAIVLEEEVA*PPGFNIFPSFV Trigger: CACAAACGAGGGGAATATATTAAAACCTGGCGGCCACGCTACTTCCTCCTCAAGAACGATGGCACCTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001780.10 ENSMUST00000128300.9 ENSMUST00000130342.2 ENSMUST00000144550.9 |
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