Pregenerated sensors for AKR7A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028743Ensembl transcript IDs: ENSMUST00000073787.7
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGTGGAGACCAGCCGAAAAGCACACACTAGGTCAGCACTGGGCAAGGAGTGGCTCCTCCTCCATGGGGTaGCAGAAGAGCCCCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: RWRPAEKHTLGQHWARSGSSSMG*QKSPWD Trigger: ATCCCAGGGGCTCTTCTGCCACCCCATGGAGGAGGA...GCCACTCCTTGCCCAGTGCTGACCTAGTGTGTGCTTTTCGGCTGGTCTCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGACACCTGCTTTATTCAGACAGGAAACAGGTGGAGACCAGCCGAAAAGCGCACTGGGCAAGGAGTaGCCAGGCGTAACTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GQTPALFRQETGGDQPKSALGKE*PGVTPP Trigger: AGGAGGAGTTACGCCTGGCCACTCCTTGCCCAGTGC...GCTTTTCGGCTGGTCTCCACCTGTTTCCTGTCTGAATAAAGCAGGTGTCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| 3UTR CCA 72 bp | CTGGGCAAGGAGTGGCCAGGCGTAACTCCTCCTCCATaGGGTGGCAGAAGAGCCCCTGGGATCTTGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LGKEWPGVTPPP*GGRRAPGILSH Trigger: GTGGCTCAAGATCCCAGGGGCTCTTCTGCCACCCCATGGAGGAGGAGTTACGCCTGGCCACTCCTTGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| 3UTR CCA 72 bp | CAAGGAGTGGCCAGGCGTAACTCCTCCTCCATGGGGTaGCAGAAGAGCCCCTGGGATCTTGAGCCACAACAG | + |
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Preference number: 3 (lower is better) Translates to: QGVARRNSSSMG*QKSPWDLEPQQ Trigger: CTGTTGTGGCTCAAGATCCCAGGGGCTCTTCTGCCACCCCATGGAGGAGGAGTTACGCCTGGCCACTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| CDS-3UTR TCA 90 bp | TGGAGACCAGCCGAAAAGCACACACTAGGTCAGCACTGGGCAAGGAGTGGCCAGTGGACATGCCCAAGATaGCTGCGTCCCCTCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: WRPAEKHTLGQHWARSGQWTCPR*LRPLGC Trigger: GCACCCGAGGGGACGCAGTCATCTTGGGCATGTCCA...CTGGCCACTCCTTGCCCAGTGCTGACCTAGTGTGTGCTTTTCGGCTGGTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| CDS-3UTR TCA 90 bp | CGAAAAGCACACACTAGGTCAGCACTGGGCAAGGAGTGGCCAGGCGTAACTCCTGCTGTCAGGCTTCAGTaGCTTCCCTTCCCAGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RKAHTRSALGKEWPGVTPAVRLQ*LPFPGV Trigger: AACCCCTGGGAAGGGAAGTCACTGAAGCCTGACAGC...AGGAGTTACGCCTGGCCACTCCTTGCCCAGTGCTGACCTAGTGTGTGCTTTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| CDS-3UTR TCA 90 bp | GGTCAGACACCTGCTTTATTCAGACAGGAAACAGGTGGAGACCAGCCGAAAAGCTCAGTCCGAAGTGTCTaGGGCAGGGGAGGAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GQTPALFRQETGGDQPKSSVRSV*GRGGAR Trigger: CCGAGCTCCTCCCCTGCCTCAGACACTTCGGACTGA...GCTTTTCGGCTGGTCTCCACCTGTTTCCTGTCTGAATAAAGCAGGTGTCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| CDS-3UTR GCA 90 bp | AGGTGGAGACCAGCCGAAAAGCACACACTAGGTCAGCACTGGGCAAGGAGTGGCCAAGCTCCACAAACTTaGCCTCCTGATGCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RWRPAEKHTLGQHWARSGQAPQT*PPDAAG Trigger: ACCAGCTGCATCAGGAGGGCAAGTTTGTGGAGCTTG...GCCACTCCTTGCCCAGTGCTGACCTAGTGTGTGCTTTTCGGCTGGTCTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| CDS-3UTR GCA 90 bp | TTTATTCAGACAGGAAACAGGTGGAGACCAGCCGAAAAGCACACACTAGGTCAGCTGCGTCCCCTCGGGTaGCCTGGAGCTGCGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FIQTGNRWRPAEKHTLGQLRPLG*PGAASG Trigger: ACCACTCGCAGCTCCAGGGCACCCGAGGGGACGCAG...CTGACCTAGTGTGTGCTTTTCGGCTGGTCTCCACCTGTTTCCTGTCTGAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| CDS-3UTR GCA 90 bp | CAGGTGGAGACCAGCCGAAAAGCACACACTAGGTCAGCACTGGGCAAGGAGTGGCTTCGTATTTATACTTaGCAGTCAGCAGGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QVETSRKAHTRSALGKEWLRIYT*QSAGPQ Trigger: CTGGGGGCCTGCTGACTGGCAAGTATAAATACGAAG...CCACTCCTTGCCCAGTGCTGACCTAGTGTGTGCTTTTCGGCTGGTCTCCACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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| CDS-3UTR CAA 90 bp | TTTATTCAGACAGGAAACAGGTGGAGACCAGCCGAAAAGCACACACTAGGTCAGGACCATGTTCCAGGCTaGGTCAAAGGCTTCCACGAC | + |
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Preference number: 5 (lower is better) Translates to: FIQTGNRWRPAEKHTLGQDHVPG*VKGFHD Trigger: GTCGTGGAAGCCTTTGACCAAGCCTGGAACATGGTC...CTGACCTAGTGTGTGCTTTTCGGCTGGTCTCCACCTGTTTCCTGTCTGAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073787.7 |
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