Pregenerated sensors for AKR1E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045410Ensembl transcript IDs: ENSMUST00000091848.7, ENSMUST00000110691.10
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACACAGAGGGATTCGTGGCTCTAGCTGTATATGTAGGAGAGGATaGCCTAGTCAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: THRGIRGSSCICRRG*PSQSSMGGEALGPV Trigger: CACAGGACCAAGGGCCTCTCCTCCCATTGATGACTGACTAGGCCATCCTCTCCTACATATACAGCTAGAGCCACGAATCCCTCTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR GCA 90 bp | CAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATaGCCCAGTATACAGGAATGCCTGGACAAGGAATCTGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: QSSMGGEALGPVKVL*PSIQECLDKESGVG Trigger: ACCCACTCCAGATTCCTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR TCA 90 bp | GATGGCCTAGTCAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTaGAGGTTTTATGCCCCAGTATACAGGAATGCCTGGACAAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: DGLVSHQWEERPLVL*RFYAPVYRNAWTRN Trigger: ATTCCTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACTGACTAGGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR TCA 90 bp | ACTGACCTGAAGTCAGGGCTGGGTGACAGAGATTTTGGAGAAGTCTaGGGATGCTCTGAAGATGGTTACCTTCCACTTAGCCTTTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: TDLKSGLGDRDFGEV*GCSEDGYLPLSLWK Trigger: CTTCCAAAGGCTAAGTGGAAGGTAACCATCTTCAGAGCATCCTCAGACTTCTCCAAAATCTCTGTCACCCAGCCCTGACTTCAGGTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CCA 90 bp | TTCTTACTCTGTTGTCATTCTTGGCTGTGTCTGTGTCTGGTGCTGTaGTCACACAGGGACCACATAGCCTTTACAGAGTTGGATCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FLLCCHSWLCLCLVL*SHRDHIAFTELDQS Trigger: GCTCTGATCCAACTCTGTAAAGGCTATGTGGTCCCTGTGTGACCACAGCACCAGACACAGACACAGCCAAGAATGACAACAGAGTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CCA 90 bp | TCTGTTCTAGGTAGGATTTCCTTGTTCTTACTCTGTTGTCATTCTTaGCTGTGTCTGTGTCTGGTGCTGTGGTCACACAGGGACCACATA | + |
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Preference number: 1 (lower is better) Translates to: SVLGRISLFLLCCHS*LCLCLVLWSHRDHI Trigger: TATGTGGTCCCTGTGTGACCACAGCACCAGACACAGACACAGCCAAGAATGACAACAGAGTAAGAACAAGGAAATCCTACCTAGAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CCA 90 bp | GAAAGCATGTTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTaGGGCTCCCACATTTTCTTTATTCCAACTAACAGTTGGCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: ESMFSRDSQCLYTED*GSHIFFIPTNSWLG Trigger: TCCTAGCCAACTGTTAGTTGGAATAAAGAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAACATGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CCA 90 bp | GACAACAATTACAATATTCTTTGCACTCAGCTATTCCTAACAACTTaGAAGCAGCCACAGCCTCCATGGTCTTTCCCTGTCTCATACCTA | + |
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Preference number: 1 (lower is better) Translates to: DNNYNILCTQLFLTT*KQPQPPWSFPVSYL Trigger: TAGGTATGAGACAGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAGGAATAGCTGAGTGCAAAGAATATTGTAATTGTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CCA 90 bp | AACTTCAGAGGATTGTCACGAAAACTAACTGAAGCCATTATGACATaGGATTGCCCACTATGCTTGAACAGTATCTTGCATATAGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: NFRGLSRKLTEAIMT*DCPLCLNSILHIVE Trigger: CTCAACTATATGCAAGATACTGTTCAAGCATAGTGGGCAATCCCATGTCATAATGGCTTCAGTTAGTTTTCGTGACAATCCTCTGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCTGGAGTGGGTGTTTTaGGGAGCAGGTGGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GRRGPWSCEGFMPQYTGMLEWVF*GAGGVG Trigger: CCCCACACCACCTGCTCCCCAAAACACCCACTCCAG...CATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACTGTGTCTGTGTCTGGTaGTGTGGTCACACAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: VEHQLYASLMFGVARMKDCVCVW*CGHTGT Trigger: GGTCCCTGTGTGACCACAGCACCAGACACAGACACA...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATCCTGGACAAGGAATCTaGAGTGGGTGTTTTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHPGQGI*SGCFGE Trigger: CTCCCCAAAACACCCACTCCAGATTCCTTGTCCAGG...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CAA 90 bp | CCTTCCTTGGTAGAGGCCATTGGACAGCAACCCAGCAAATTACTGTaGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLVEAIGQQPSKLL*STSCMPASCLELPG Trigger: TCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAACAGTAATTTGCTGGGTTGCTGTCCAATGGCCTCTACCAAGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGCTATTCCTAACAACTTGGAAGCAGCCACAGCCTCCATGGTCTTTCCCTTGTGTCTGTGTCTGGTaGTGTGGTCACACAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: TQLFLTTWKQPQPPWSFPCVCVW*CGHTGT Trigger: GGTCCCTGTGTGACCACAGCACCAGACACAGACACA...AGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAGGAATAGCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACCAGCCACAGCCTCCATaGTCTTTCCCTGTCTCATAC | + |
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Preference number: 2 (lower is better) Translates to: VEHQLYASLMFGVARMKDQPQPP*SFPVSY Trigger: GTATGAGACAGGGAAAGACCATGGAGGCTGTGGCTG...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGACATTTTGTCTGAGCTaGGGTCTCAGCTCCATAGCC | + |
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Preference number: 2 (lower is better) Translates to: GRRGPWSCEGFMPQYTGMTFCLS*GLSSIA Trigger: GGCTATGGAGCTGAGACCCCAGCTCAGACAAAATGT...CATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCCTGGACAAGGGGGAGCAGGTGGTGTaGGGAGAGGATAGAGAATTT | + |
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Preference number: 2 (lower is better) Translates to: ALGPVKVLCPSIQECLDKGEQVV*GEDREF Trigger: AAATTCTCTATCCTCTCCCCACACCACCTGCTCCCC...CTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATACAAGGAATCTGGAGTaGGTGTTTTGGGGAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHTRNLE*VFWGAG Trigger: ACCTGCTCCCCAAAACACCCACTCCAGATTCCTTGT...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACGGGAGGAGAGGCCCTTaGTCCTGTGAAGGTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: VEHQLYASLMFGVARMKDGRRGP*SCEGFM Trigger: CATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CAA 90 bp | CAGCTCCAAAGCTTGGGCCATCCCTACTGTACTTTCTCTCCTTCCTaGGTAGAGGCCATTGGACAGCAACCCAGCAAATTACTGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: QLQSLGHPYCTFSPS*VEAIGQQPSKLLLS Trigger: GCTCAACAGTAATTTGCTGGGTTGCTGTCCAATGGCCTCTACCAAGGAAGGAGAGAAAGTACAGTAGGGATGGCCCAAGCTTTGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGCTATTCCTAACAACTTGGAAGCAGCCACAGCCTCCATGGTCTTTCCCTCTGTGTCTGGTGCTGTaGTCACACAGGGACCACATA | + |
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Preference number: 2 (lower is better) Translates to: TQLFLTTWKQPQPPWSFPLCLVL*SHRDHI Trigger: TATGTGGTCCCTGTGTGACCACAGCACCAGACACAG...AGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAGGAATAGCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATGTATACAGGAATGCCTaGACAAGGAATCTGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHVYRNA*TRNLEW Trigger: CCACTCCAGATTCCTTGTCCAGGCATTCCTGTATAC...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCGTGATCTGGTTCTGCTaGGCAGAGATGATGGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFVIWFC*AEMMAS Trigger: ACTCGCCATCATCTCTGCTCAGCAGAACCAGATCAC...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACCCCAGTATACAGGAATaGCTGGACAAGGAATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VEHQLYASLMFGVARMKDPSIQE*LDKESG Trigger: TCCAGATTCCTTGTCCAGGCATTCCTGTATACTGGG...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACTCAGCCTCAGGTCCGTaGTTACTGAAACCATCTCAT | + |
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Preference number: 2 (lower is better) Translates to: VEHQLYASLMFGVARMKDSASGP*LLKPSH Trigger: ATGAGATGGTTTCAGTAACCACGGACCTGAGGCTGA...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACGTATACAGGAATGCCTaGACAAGGAATCTGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VEHQLYASLMFGVARMKDVYRNA*TRNLEW Trigger: CCACTCCAGATTCCTTGTCCAGGCATTCCTGTATAC...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCACATTTTGTCTGAGCTaGGGTCTCAGCTCCATAGCC | + |
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Preference number: 2 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFTFCLS*GLSSIA Trigger: GGCTATGGAGCTGAGACCCCAGCTCAGACAAAATGT...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATCTTTACACAGAGGATTaGGGCTCCCACATTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHLYTED*GSHIFF Trigger: AAAGAAAATGTGGGAGCCCCAATCCTCTGTGTAAAG...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCCAGGTCCGTGGTTACTaGAACCATCTCATGGATATT | + |
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Preference number: 2 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFQVRGY*NHLMDI Trigger: AATATCCATGAGATGGTTTCAGTAACCACGGACCTG...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCCTGGACAAGGACATGGCTGTGGCCTaGAAGAAATATTTATGTATG | + |
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Preference number: 2 (lower is better) Translates to: ALGPVKVLCPSIQECLDKDMAVA*KKYLCM Trigger: CATACATAAATATTTCTTTCAGGCCACAGCCATGTC...CTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACTGGAAGGCAGCAGGATaGCAAAACTTTGATATAAGA | + |
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Preference number: 2 (lower is better) Translates to: VEHQLYASLMFGVARMKDWKAAG*QNFDIR Trigger: TCTTATATCAAAGTTTTGTCATCCTGCTGCCTTCCA...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCCTGGACAAGAGGATGACAAAACTTTaGTATAAGATGAGACACCAC | + |
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Preference number: 2 (lower is better) Translates to: ALGPVKVLCPSIQECLDKRMTKL*YKMRHH Trigger: GTGGTGTCTCATCTTATATCAAAGTTTTGTCATCCT...CTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCGACAGGAACAAGTTCTaGACCATCAGTTTTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFDRNKF*TISFME Trigger: TTCCATAAAACTGATGGTCCAGAACTTGTTCCTGTC...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCCTGTGTCTGGTGCTGTaGTCACACAGGGACCACATA | + |
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Preference number: 2 (lower is better) Translates to: MFLKIIALKACSHGIVSVLCLVL*SHRDHI Trigger: TATGTGGTCCCTGTGTGACCACAGCACCAGACACAG...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCCAGCCACAGCCTCCATaGTCTTTCCCTGTCTCATAC | + |
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Preference number: 2 (lower is better) Translates to: MFLKIIALKACSHGIVSVQPQPP*SFPVSY Trigger: GTATGAGACAGGGAAAGACCATGGAGGCTGTGGCTG...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR CAA 90 bp | GTGCTAAATGTTTGTGGACTGAAAACAAAGCAGAAGTTTCTGCCTTaGTTGACTAAAGGCTTTTTCTGCTATTTCCTGACACTCCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: VLNVCGLKTKQKFLP*LTKGFFCYFLTLLR Trigger: TCTTAGGAGTGTCAGGAAATAGCAGAAAAAGCCTTTAGTCAACAAAGGCAGAAACTTCTGCTTTGTTTTCAGTCCACAAACATTTAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCCAGGTCCGTGGTTACTaGAACCATCTCATGGATATT | + |
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Preference number: 2 (lower is better) Translates to: MFLKIIALKACSHGIVSVQVRGY*NHLMDI Trigger: AATATCCATGAGATGGTTTCAGTAACCACGGACCTG...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCGACAGGAACAAGTTCTaGACCATCAGTTTTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: MFLKIIALKACSHGIVSVDRNKF*TISFME Trigger: TTCCATAAAACTGATGGTCCAGAACTTGTTCCTGTC...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR TCA 72 bp | AAGAGCTCGCTGAGGTGCTGTGGTGAAGTTGTTGGGTaGGAGGGACAGCACAGTCTGAAGTTAAGGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: KSSLRCCGEVVG*EGQHSLKLRWL Trigger: CAGCCACCTTAACTTCAGACTGTGCTGTCCCTCTCACCCAACAACTTCACCACAGCACCTCAGCGAGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CAA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATGCTATTCCTAACAACTaGGAAGCAGCCACAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHAIPNN*EAATAS Trigger: GGAGGCTGTGGCTGCTTCCAAGTTGTTAGGAATAGC...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR TCA 72 bp | GTCAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTaGAGGTTTTATGCCCCAGTATACAGGAATGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VSHQWEERPLVL*RFYAPVYRNAW Trigger: CCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CAA 90 bp | ATTCGTGGCTCTAGCTGTATATGTAGGAGAGGATGGCCTAGTCAGTCATCAATGTCTGGAGTGGGTGTTTaGGGGAGCAGGTGGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: IRGSSCICRRGWPSQSSMSGVGV*GSRWCG Trigger: CCCACACCACCTGCTCCCCAAAACACCCACTCCAGA...CATTGATGACTGACTAGGCCATCCTCTCCTACATATACAGCTAGAGCCACGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR-3UTR CAA 90 bp | GGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGACTCTGTTGTCATTCTaGGCTGTGTCTGTGTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GRRGPWSCEGFMPQYTGMTLLSF*AVSVSG Trigger: ACCAGACACAGACACAGCCAAGAATGACAACAGAGT...CATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| 3UTR GCA 72 bp | ATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATaGCCCAGTATACAGGAATGCCTGGACAAGGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: MGGEALGPVKVL*PSIQECLDKES Trigger: AGATTCCTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CCA 72 bp | TGTTGTCATTCTTGGCTGTGTCTGTGTCTGGTGCTGTaGTCACACAGGGACCACATAGCCTTTACAGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CCHSWLCLCLVL*SHRDHIAFTEL Trigger: CAACTCTGTAAAGGCTATGTGGTCCCTGTGTGACCACAGCACCAGACACAGACACAGCCAAGAATGACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCTTGTTCTTACTCTGTaGTCATTCTTGGCTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRRGPWSCEGFMPQYTGMLVLTL*SFLAVS Trigger: AGACACAGCCAAGAATGACAACAGAGTAAGAACAAG...CATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCCTGGACAAGTCTTTACACAGAGGATaGGGGCTCCCACATTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALGPVKVLCPSIQECLDKSLHRG*GLPHFL Trigger: AAGAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGA...CTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR TCA 72 bp | AAGTCAGGGCTGGGTGACAGAGATTTTGGAGAAGTCTaGGGATGCTCTGAAGATGGTTACCTTCCACTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSGLGDRDFGEV*GCSEDGYLPLS Trigger: GCTAAGTGGAAGGTAACCATCTTCAGAGCATCCTCAGACTTCTCCAAAATCTCTGTCACCCAGCCCTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR-3UTR CAA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATGATTGCCCACTATGCTaGAACAGTATCTTGCATATA | + |
|
Preference number: 3 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHDCPLC*NSILHI Trigger: TATATGCAAGATACTGTTCAAGCATAGTGGGCAATC...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR-3UTR CAA 90 bp | CTAACAACTTGGAAGCAGCCACAGCCTCCATGGTCTTTCCCTGTCTCATACCTACTTGTTCTTACTCTGTaGTCATTCTTGGCTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LTTWKQPQPPWSFPVSYLLVLTL*SFLAVS Trigger: AGACACAGCCAAGAATGACAACAGAGTAAGAACAAG...TAGGTATGAGACAGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CCA 72 bp | GGATGCTCTGAAGATGGTTACCTTCCACTTAGCCTTTaGAAGCCTGTTCTGAAGACAACCCCACAAAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GCSEDGYLPLSL*KPVLKTTPQSK Trigger: TTTGCTTTGTGGGGTTGTCTTCAGAACAGGCTTCCAAAGGCTAAGTGGAAGGTAACCATCTTCAGAGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CCA 72 bp | CTATTCCTAACAACTTGGAAGCAGCCACAGCCTCCATaGTCTTTCCCTGTCTCATACCTAGGTCTTTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFLTTWKQPQPP*SFPVSYLGLYF Trigger: AAAATAAAGACCTAGGTATGAGACAGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAGGAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CCA 72 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTaGGGCTCCCACATTTTCTTTATTCCAACTAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: FSRDSQCLYTED*GSHIFFIPTNS Trigger: ACTGTTAGTTGGAATAAAGAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCACTCTGTTGTCATTCTaGGCTGTGTCTGTGTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: MFLKIIALKACSHGIVSVTLLSF*AVSVSG Trigger: ACCAGACACAGACACAGCCAAGAATGACAACAGAGT...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR GCA 72 bp | AGGCTACGACTAACTGACAACAATTACAATATTCTTTaGACTCAGCTATTCCTAACAACTTGGAAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLRLTDNNYNIL*TQLFLTTWKQP Trigger: TGGCTGCTTCCAAGTTGTTAGGAATAGCTGAGTGCAAAGAATATTGTAATTGTTGTCAGTTAGTCGTAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR TCA 72 bp | CTTCTGAAAATAGAAGCCAGAAAGGCTACGACTAACTaGCAACAATTACAATATTCTTTGCACTCAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: LLKIEARKATTN*QQLQYSLHSAI Trigger: AATAGCTGAGTGCAAAGAATATTGTAATTGTTGTCAGTTAGTCGTAGCCTTTCTGGCTTCTATTTTCAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CCA 72 bp | ACTTTATATTCTCATAATACAGACAGGAACAAGTTCTaGACCATCAGTTTTATGGAATTCCATCCTCATTCG | + |
|
Preference number: 3 (lower is better) Translates to: TLYSHNTDRNKF*TISFMEFHPHS Trigger: CGAATGAGGATGGAATTCCATAAAACTGATGGTCCAGAACTTGTTCCTGTCTGTATTATGAGAATATAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR TCA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATGTGAAACCCACCTCCTaGGCCACCGAGGGGACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHVKPTS*ATEGTV Trigger: TACCGTCCCCTCGGTGGCTCAGGAGGTGGGTTTCAC...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | CAATTCCAGTCCAGGGTCAGGCCACTAACTGGAGTCTCTAGTCAGCTCACCCATGGGCTTCCAGGGTATTaGTGCATGCTGTTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QFQSRVRPLTGVSSQLTHGLPGY*CMLFSP Trigger: TGGTGAAAACAGCATGCACCAATACCCTGGAAGCCC...ATGGGTGAGCTGACTAGAGACTCCAGTTAGTGGCCTGACCCTGGACTGGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGGGGCTTCCAGGGTATTaGTGCATGCTGTTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GRRGPWSCEGFMPQYTGMGLPGY*CMLFSP Trigger: TGGTGAAAACAGCATGCACCAATACCCTGGAAGCCC...CATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCCTGGACAAGACACCAGGTCCTCCATaGCCTCCCAAGTGTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGPVKVLCPSIQECLDKTPGPP*PPKCQE Trigger: TTCTTGACACTTGGGAGGCCATGGAGGACCTGGTGT...CTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | CTAACAACTTGGAAGCAGCCACAGCCTCCATGGTCTTTCCCTGTCTCATACCTAACACCAGGTCCTCCATaGCCTCCCAAGTGTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTTWKQPQPPWSFPVSYLTPGPP*PPKCQE Trigger: TTCTTGACACTTGGGAGGCCATGGAGGACCTGGTGT...TAGGTATGAGACAGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CAA 72 bp | GTAGAGGCCATTGGACAGCAACCCAGCAAATTACTGTaGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VEAIGQQPSKLL*STSCMPASCLE Trigger: CTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAACAGTAATTTGCTGGGTTGCTGTCCAATGGCCTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACCACATAGCCTTTACAGAGTTGGATCAGAGCTTGGTGATCTGGTTCTCAAGAAAGCTGGTGTaGCTGGGTATGACCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRDHIAFTELDQSLVIWFSRKLV*LGMTLP Trigger: TGGCAAGGTCATACCCAGTCACACCAGCTTTCTTGA...GAACCAGATCACCAAGCTCTGATCCAACTCTGTAAAGGCTATGTGGTCCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCTTCCAGGGTATTGGTaGATGCTGTTTTCACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GRRGPWSCEGFMPQYTGMLPGYW*MLFSPM Trigger: CATTGGTGAAAACAGCATGCACCAATACCCTGGAAG...CATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CAA 72 bp | AGCTTGGGCCATCCCTACTGTACTTTCTCTCCTTCCTaGGTAGAGGCCATTGGACAGCAACCCAGCAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SLGHPYCTFSPS*VEAIGQQPSKL Trigger: TAATTTGCTGGGTTGCTGTCCAATGGCCTCTACCAAGGAAGGAGAGAAAGTACAGTAGGGATGGCCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR TCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACTGCTGTTTTCACCAATaGCTTCTTGTGGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VEHQLYASLMFGVARMKDCCFHQ*LLVAGT Trigger: TGTACCTGCCACAAGAAGTCATTGGTGAAAACAGCA...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACCACATAGCCTTTACAGAGTTGGATCAGAGCTTGGTGATCTGGTTCAATCGGATCAAAATCTaGGCAGGAGACTTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HRDHIAFTELDQSLVIWFNRIKI*AGDFPC Trigger: GCATGGGAAGTCTCCTGCTCAGATTTTGATCCGATT...GAACCAGATCACCAAGCTCTGATCCAACTCTGTAAAGGCTATGTGGTCCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACCTCTCAAGCTGTTCATaGTTAAAGTTGGACACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEHQLYASLMFGVARMKDLSSCS*LKLDTP Trigger: TGGGGTGTCCAACTTTAACCATGAACAGCTTGAGAG...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCCAGTTGTGGGGAATGTaGCCAAACGGAGGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFQLWGM*PNGGSC Trigger: ACAAGAACCTCCGTTTGGCCACATTCCCCACAACTG...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCTATTCCTAACAACTTGGAAGCAGCCACAGCCTCCATGGTCTTTCCCTGGTGATTTTCAGTTGTaGGGAATGTGGCCAAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLFLTTWKQPQPPWSFPGDFQL*GMWPNG Trigger: TCCGTTTGGCCACATTCCCCACAACTGAAAATCACC...AGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAGGAATAGCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | CACAGGGACCACATAGCCTTTACAGAGTTGGATCAGAGCTTGGTGATCTGGTTCACCAATGACTTCTTGTaGCAGGTACACCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRDHIAFTELDQSLVIWFTNDFL*QVHHSF Trigger: GAAGCTGTGGTGTACCTGCCACAAGAAGTCATTGGT...GAACCAGATCACCAAGCTCTGATCCAACTCTGTAAAGGCTATGTGGTCCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | CTAACAACTTGGAAGCAGCCACAGCCTCCATGGTCTTTCCCTGTCTCATACCTAACCAATGACTTCTTGTaGCAGGTACACCACAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTTWKQPQPPWSFPVSYLTNDFL*QVHHSL Trigger: TAAGCTGTGGTGTACCTGCCACAAGAAGTCATTGGT...TAGGTATGAGACAGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091848.7 |
||
| CDS-3UTR CCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCGGTGATTTTCAGTTGTaGGGAATGTGGCCAAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFGDFQL*GMWPNG Trigger: TCCGTTTGGCCACATTCCCCACAACTGAAAATCACC...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCTACACCACAGCTTACTaGCTACAAAGAGATCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFYTTAY*LQRDPL Trigger: GAGAGGATCTCTTTGTAGTCAGTAAGCTGTGGTGTA...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091848.7 |
||
| CDS-3UTR TCA 90 bp | ATTCGTGGCTCTAGCTGTATATGTAGGAGAGGATGGCCTAGTCAGTCATCAATGAATCGGATCAAAATCTaGGCAGGAGACTTCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: IRGSSCICRRGWPSQSSMNRIKI*AGDFPC Trigger: GCATGGGAAGTCTCCTGCTCAGATTTTGATCCGATT...CATTGATGACTGACTAGGCCATCCTCTCCTACATATACAGCTAGAGCCACGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACCTTCCCATGCTTCTTTaGAATCTTTCGAATGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VEHQLYASLMFGVARMKDLPMLL*NLSNDS Trigger: ACTGTCATTCGAAAGATTGCAAAGAAGCATGGGAAG...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCCTCTCAAGCTGTTCATaGTTAAAGTTGGACACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFLSSCS*LKLDTP Trigger: TGGGGTGTCCAACTTTAACCATGAACAGCTTGAGAG...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR TCA 90 bp | ATTCGTGGCTCTAGCTGTATATGTAGGAGAGGATGGCCTAGTCAGTCATCAATGTGCTGTTTTCACCAATaGCTTCTTGTGGCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IRGSSCICRRGWPSQSSMCCFHQ*LLVAGT Trigger: TGTACCTGCCACAAGAAGTCATTGGTGAAAACAGCA...CATTGATGACTGACTAGGCCATCCTCTCCTACATATACAGCTAGAGCCACGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| 3UTR CAA 72 bp | TTACAATATTCTTTGCACTCAGCTATTCCTAACAACTaGGAAGCAGCCACAGCCTCCATGGTCTTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQYSLHSAIPNN*EAATASMVFPC Trigger: ACAGGGAAAGACCATGGAGGCTGTGGCTGCTTCCAAGTTGTTAGGAATAGCTGAGTGCAAAGAATATTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR GCA 90 bp | ATTCGTGGCTCTAGCTGTATATGTAGGAGAGGATGGCCTAGTCAGTCATCAATGCTTCCCATGCTTCTTTaGAATCTTTCGAATGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRGSSCICRRGWPSQSSMLPMLL*NLSNDS Trigger: ACTGTCATTCGAAAGATTGCAAAGAAGCATGGGAAG...CATTGATGACTGACTAGGCCATCCTCTCCTACATATACAGCTAGAGCCACGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCCAGTTGTGGGGAATGTaGCCAAACGGAGGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MFLKIIALKACSHGIVSVQLWGM*PNGGSC Trigger: ACAAGAACCTCCGTTTGGCCACATTCCCCACAACTG...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR GCA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCCTTCCAGGGTATTGGTaGATGCTGTTTTCACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: MFLKIIALKACSHGIVSVLPGYW*MLFSPM Trigger: CATTGGTGAAAACAGCATGCACCAATACCCTGGAAG...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS CCA 90 bp | GCTTCCAGGGTATTGGTGCATGCTGTTTTCACCAATGACTTCTTGTaGCAGGTACACCACAGCTTCCAGGTGCCCAAGCCCACTGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASRVLVHAVFTNDFL*QVHHSFQVPKPTVG Trigger: CCCTACAGTGGGCTTGGGCACCTGGAAGCTGTGGTGTACCTGCCACAAGAAGTCATTGGTGAAAACAGCATGCACCAATACCCTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110691.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGTCTTTTTCCCCAGGCTaGAAACCCATGGGCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRRGPWSCEGFMPQYTGMSFSPG*KPMGQC Trigger: ACACTGGCCCATGGGTTTCAAGCCTGGGGAAAAAGA...CATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CAA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCTCTTTTTCCCCAGGCTaGAAACCCATGGGCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFSFSPG*KPMGQC Trigger: ACACTGGCCCATGGGTTTCAAGCCTGGGGAAAAAGA...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CAA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACCTTGGTGATTTTCAGTaGTGGGGAATGTGGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VEHQLYASLMFGVARMKDLGDFQ*WGMWPN Trigger: GTTTGGCCACATTCCCCACAACTGAAAATCACCAAG...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
||
| CDS-3UTR CAA 90 bp | GCCCTTGGTCCTGTGAAGGTTTTATGCCCCAGTATACAGGAATGCCTGGACAAGCTTGGTGATTTTCAGTaGTGGGGAATGTGGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALGPVKVLCPSIQECLDKLGDFQ*WGMWPN Trigger: GTTTGGCCACATTCCCCACAACTGAAAATCACCAAG...CTTGTCCAGGCATTCCTGTATACTGGGGCATAAAACCTTCACAGGACCAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS CCA 90 bp | CTGACCCTCAAACCAGGCTTATCCAAAAGCCTCTCAAGCTGTTCATaGTTAAAGTTGGACACCCCAAGGTTCTTCACCAGACCCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LTLKPGLSKSLSSCS*LKLDTPRFFTRPSN Trigger: GTTTGAGGGTCTGGTGAAGAACCTTGGGGTGTCCAACTTTAACCATGAACAGCTTGAGAGGCTTTTGGATAAGCCTGGTTTGAGGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS-3UTR CAA 90 bp | GTTGAGCACCAGCTGTATGCCAGCCTCATGTTTGGAGTTGCCAGGATGAAAGACCTTGGGGTGACAGATTaGGGGATCACTATTAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: VEHQLYASLMFGVARMKDLGVTD*GITIKF Trigger: GAACTTAATAGTGATCCCCAAATCTGTCACCCCAAG...GTCTTTCATCCTGGCAACTCCAAACATGAGGCTGGCATACAGCTGGTGCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS TCA 90 bp | AATCTTTCGAATGACAGTATCATCCATCAAGTGAAACCCACCTCCTaGGCCACCGAGGGGACGGTAAGCAGTCACAGACACATTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: NLSNDSIIHQVKPTS*ATEGTVSSHRHISF Trigger: AAAAGAAATGTGTCTGTGACTGCTTACCGTCCCCTCGGTGGCTCAGGAGGTGGGTTTCACTTGATGGATGATACTGTCATTCGAAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS-3UTR CAA 90 bp | TTCTCACGGGATAGTCAGTGTCTTTACACAGAGGATTGGGGCTCCCACATTTTCGTGGAAAGGATAGTCTaGGTGATTTTCAGTTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: FSRDSQCLYTEDWGSHIFVERIV*VIFSCG Trigger: CCCACAACTGAAAATCACCAAGACTATCCTTTCCAC...GAAAATGTGGGAGCCCCAATCCTCTGTGTAAAGACACTGACTATCCCGTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS-3UTR CAA 90 bp | ATTCGTGGCTCTAGCTGTATATGTAGGAGAGGATGGCCTAGTCAGTCATCAATGCTTGGGGTGACAGATTaGGGGATCACTATTAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: IRGSSCICRRGWPSQSSMLGVTD*GITIKF Trigger: GAACTTAATAGTGATCCCCAAATCTGTCACCCCAAG...CATTGATGACTGACTAGGCCATCCTCTCCTACATATACAGCTAGAGCCACGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS GCA 90 bp | CTGAAATCGGATCAAAATCTGAGCAGGAGACTTCCCATGCTTCTTTaGAATCTTTCGAATGACAGTATCATCCATCAAGTGAAACCCACC | + |
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Preference number: 5 (lower is better) Translates to: LKSDQNLSRRLPMLL*NLSNDSIIHQVKPT Trigger: GGTGGGTTTCACTTGATGGATGATACTGTCATTCGAAAGATTGCAAAGAAGCATGGGAAGTCTCCTGCTCAGATTTTGATCCGATTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS-3UTR CAA 90 bp | ATGTTTCTTAAAATAATTGCTTTGAAAGCATGTTCTCACGGGATAGTCAGTGTCTTCACCACGCCCTCCTaGATCTTCTCACTGATTCCC | + |
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Preference number: 5 (lower is better) Translates to: MFLKIIALKACSHGIVSVFTTPS*IFSLIP Trigger: GGGAATCAGTGAGAAGATCAAGGAGGGCGTGGTGAA...GACACTGACTATCCCGTGAGAACATGCTTTCAAAGCAATTATTTTAAGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091848.7 |
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| CDS GCA 72 bp | GAAGTGCCGGTAGCCCAGGTTGATAGCCAACTTAACTaGATCAGTCACTTCTCCTGGGGAGGCCTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: EVPVAQVDSQLN*ISHFSWGGLPG Trigger: ACCTGGAAGGCCTCCCCAGGAGAAGTGACTGATGCAGTTAAGTTGGCTATCAACCTGGGCTACCGGCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091848.7 |
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| CDS CCA 72 bp | GGTTCTTCACCAGACCCTCAAACACCAGGTCCTCCATaGCCTCCCAAGTGTCAAGAAAGCTGGTGTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: GSSPDPQTPGPP*PPKCQESWCDW Trigger: CCAGTCACACCAGCTTTCTTGACACTTGGGAGGCCATGGAGGACCTGGTGTTTGAGGGTCTGGTGAAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS TCA 72 bp | TCCTCCATGGCCTCCCAAGTGTCAAGAAAGCTGGTGTaGCTGGGTATGACCTTGCCATTGCGATCCAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSMASQVSRKLV*LGMTLPLRSKG Trigger: CCCTTTGGATCGCAATGGCAAGGTCATACCCAGTCACACCAGCTTTCTTGACACTTGGGAGGCCATGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS TCA 72 bp | AATGACAGTATCATCCATCAAGTGAAACCCACCTCCTaGGCCACCGAGGGGACGGTAAGCAGTCACAGACAC | + |
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Preference number: 6 (lower is better) Translates to: NDSIIHQVKPTS*ATEGTVSSHRH Trigger: GTGTCTGTGACTGCTTACCGTCCCCTCGGTGGCTCAGGAGGTGGGTTTCACTTGATGGATGATACTGTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS CAA 72 bp | ACTACAAAGAGATCCTCTCTCTTCACCACGCCCTCCTaGATCTTCTCACTGATTCCCATTCCCACCTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: TTKRSSLFTTPS*IFSLIPIPTSL Trigger: GAGCGAGGTGGGAATGGGAATCAGTGAGAAGATCAAGGAGGGCGTGGTGAAGAGAGAGGATCTCTTTGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091848.7 |
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| CDS CAA 90 bp | AAACCAGGCTTATCCAAAAGCCTCTCAAGCTGTTCATGGTTAAAGTaGGACACCCCAAGGTTCTTCACCAGACCCTCAAACACCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: KPGLSKSLSSCSWLK*DTPRFFTRPSNTRS Trigger: GGACCTGGTGTTTGAGGGTCTGGTGAAGAACCTTGGGGTGTCCAACTTTAACCATGAACAGCTTGAGAGGCTTTTGGATAAGCCTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS GCA 72 bp | CCAGGTAATCCAAGTTTAGGGCTTCCAGGGTATTGGTaGATGCTGTTTTCACCAATGACTTCTTGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PGNPSLGLPGYW*MLFSPMTSCGR Trigger: CCTGCCACAAGAAGTCATTGGTGAAAACAGCATGCACCAATACCCTGGAAGCCCTAAACTTGGATTACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS CCA 72 bp | GGTCCAGGTAATCCAAGTTTAGGGCTTCCAGGGTATTaGTGCATGCTGTTTTCACCAATGACTTCTTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GPGNPSLGLPGY*CMLFSPMTSCG Trigger: GCCACAAGAAGTCATTGGTGAAAACAGCATGCACCAATACCCTGGAAGCCCTAAACTTGGATTACCTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS CCA 72 bp | CTATGTGGAAAGGATAGTCTTGGTGATTTTCAGTTGTaGGGAATGTGGCCAAACGGAGGTTCTTGTCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LCGKDSLGDFQL*GMWPNGGSCLG Trigger: GCCTAGACAAGAACCTCCGTTTGGCCACATTCCCCACAACTGAAAATCACCAAGACTATCCTTTCCACATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS TCA 72 bp | CAGGAGACTTCCCATGCTTCTTTGCAATCTTTCGAATaGCAGTATCATCCATCAAGTGAAACCCACCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QETSHASLQSFE*QYHPSSETHLL Trigger: CAGGAGGTGGGTTTCACTTGATGGATGATACTGTCATTCGAAAGATTGCAAAGAAGCATGGGAAGTCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS CAA 72 bp | TTATCCAAAAGCCTCTCAAGCTGTTCATGGTTAAAGTaGGACACCCCAAGGTTCTTCACCAGACCCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSKSLSSCSWLK*DTPRFFTRPSN Trigger: GTTTGAGGGTCTGGTGAAGAACCTTGGGGTGTCCAACTTTAACCATGAACAGCTTGAGAGGCTTTTGGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS TCA 72 bp | TGGGGAATGTGGCCAAACGGAGGTTCTTGTCTAGGCTaGGGAGTTCCTCCATATCTTTTTCAGTTAATTCAA | + |
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Preference number: 6 (lower is better) Translates to: WGMWPNGGSCLG*GVPPYLFQLIQ Trigger: TTGAATTAACTGAAAAAGATATGGAGGAACTCCTCAGCCTAGACAAGAACCTCCGTTTGGCCACATTCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS CAA 72 bp | ACTCTATGTGGAAAGGATAGTCTTGGTGATTTTCAGTaGTGGGGAATGTGGCCAAACGGAGGTTCTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: TLCGKDSLGDFQ*WGMWPNGGSCL Trigger: TAGACAAGAACCTCCGTTTGGCCACATTCCCCACAACTGAAAATCACCAAGACTATCCTTTCCACATAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS GCA 72 bp | GATCAAAATCTGAGCAGGAGACTTCCCATGCTTCTTTaGAATCTTTCGAATGACAGTATCATCCATCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: DQNLSRRLPMLL*NLSNDSIIHQV Trigger: CACTTGATGGATGATACTGTCATTCGAAAGATTGCAAAGAAGCATGGGAAGTCTCCTGCTCAGATTTTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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| CDS CCA 72 bp | ATGGCAAAAATCAATCAGCTTCTTTTGATTAAGATATaGGTGACATTCAATCTGGTTAGTTATCGGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: MAKINQLLLIKI*VTFNLVSYRPD Trigger: GTCAGGCCGATAACTAACCAGATTGAATGTCACCCATATCTTAATCAAAAGAAGCTGATTGATTTTTGCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091848.7 ENSMUST00000110691.10 |
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