Pregenerated sensors for AKR1CL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025955Ensembl transcript IDs: ENSMUST00000069142.12, ENSMUST00000159566.2, ENSMUST00000162800.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTTCAAGTCCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTaGAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCT | + |
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Preference number: 1 (lower is better) Translates to: LFKSPFNSTPPTANP*KMAAHSLPCQHSNS Trigger: AGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGGACTTGAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR CCA 90 bp | AGTCCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATaGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCTAGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: SPLSTPHPQPLILAR*LLTPFPVNTQILVY Trigger: GTAAACTAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR GCA 90 bp | GGGAGGAATGTTCTCTTTTGTCTATATGGTAAACCTATCAACATATaGATGCATCTCAAGCAGAGGACTGTTCAAGTCCCCTTTCAACTC | + |
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Preference number: 1 (lower is better) Translates to: GRNVLFCLYGKPINI*MHLKQRTVQVPFQL Trigger: GAGTTGAAAGGGGACTTGAACAGTCCTCTGCTTGAGATGCATGCATATGTTGATAGGTTTACCATATAGACAAAAGAGAACATTCCTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR TCA 90 bp | GCTCACTCCCTTCCCTGTCAACACTCAAATTCTAGTTTACTTCAGTaGCTCAGATGGAAACAGACCATACAAATAAAAGACATGGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: AHSLPCQHSNSSLLQ*LRWKQTIQIKDMVV Trigger: AACCACCATGTCTTTTATTTGTATGGTCTGTTTCCATCTGAGTCACTGAAGTAAACTAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR GCA 90 bp | GGAATGTTCTCTTTTGTCTATATGGTAAACCTATCAACATATGCATaGATCTCAAGCAGAGGACTGTTCAAGTCCCCTTTCAACTCCACA | + |
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Preference number: 1 (lower is better) Translates to: GMFSFVYMVNLSTYA*ISSRGLFKSPFNST Trigger: TGTGGAGTTGAAAGGGGACTTGAACAGTCCTCTGCTTGAGATGCATGCATATGTTGATAGGTTTACCATATAGACAAAAGAGAACATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR CCA 90 bp | ACGAATCCCTTTATTTACGTAGACTTTAGGTTCAACCCTCAACTCTaGCTCTTGGGAGGAATGTTCTCTTTTGTCTATATGGTAAACCTA | + |
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Preference number: 1 (lower is better) Translates to: TNPFIYVDFRFNPQL*LLGGMFSFVYMVNL Trigger: TAGGTTTACCATATAGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTAAATAAAGGGATTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR CAA 90 bp | TCACAAAACACCATGGCCACCCCTCTCCATCCAGTTCAGTGTGGGTaGACGGTGATGTCGACGTCGACCAGAGGTGATGCTGATCAACAT | + |
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Preference number: 2 (lower is better) Translates to: SQNTMATPLHPVQCG*TVMSTSTRGDADQH Trigger: ATGTTGATCAGCATCACCTCTGGTCGACGTCGACATCACCGTCAACCCACACTGAACTGGATGGAGAGGGGTGGCCATGGTGTTTTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATGGCTGCTCACTTATCACAAAACACCATaGCCACCCCTCTCCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: PLSTPHPQPLILARWLLTYHKTP*PPLSIQ Trigger: CTGGATGGAGAGGGGTGGCCATGGTGTTTTGTGATA...AGTGAGCAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGCATTCTCCTCTATCACCGTTGGCTGCCAAGAGCACCATAGGCAACCAGAAAGTAGTCCAGGAGCTTaGTCTGGTTCAGATAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GAFSSITVGCQEHHRQPESSPGA*SGSDKG Trigger: ACCCTTATCTGAACCAGAGCAAGCTCCTGGACTACT...TTCTGGTTGCCTATGGTGCTCTTGGCAGCCAACGGTGATAGAGGAGAATGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTTTGTCTATATGGTCCTTGCAAGATGGCTaGTCACTCCCTTCCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GSTLNSGSWEECSLLSIWSLQDG*SLPSLS Trigger: TGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGA...CCATATAGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCACATGGCACACAGAGTTaGGTCTTCCAAGAGATATGG | + |
|
Preference number: 2 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPHGTQS*VFQEIW Trigger: CCATATCTCTTGGAAGACCCAACTCTGTGTGCCATG...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| 3UTR CAA 90 bp | CCCTTTATTTACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTaGGGAGGAATGTTCTCTTTTGTCTATATGGTAAACCTATCAACA | + |
|
Preference number: 2 (lower is better) Translates to: PFIYVDFRFNPQLWL*GGMFSFVYMVNLST Trigger: TGTTGATAGGTTTACCATATAGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTAAATAAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTTGGATACAGCGTAAGTATTTAGCAGTTTTTCACCTGTCAGTGAATTTGTCTAGTTTACTTCAGTaGCTCAGATGGAAACAGACC | + |
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Preference number: 2 (lower is better) Translates to: ASWIQRKYLAVFHLSVNLSSLLQ*LRWKQT Trigger: GGTCTGTTTCCATCTGAGTCACTGAAGTAAACTAGA...CAAATTCACTGACAGGTGAAAAACTGCTAAATACTTACGCTGTATCCAACTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR GCA 72 bp | AGATACCGGAGGGAAATTAGGGCCGGAGTTTGCTTGTaGTTTTCCGCCATGGCACACAGAGTTGGGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RYRREIRAGVCL*FSAMAHRVGSS Trigger: GGAAGACCCAACTCTGTGTGCCATGGCGGAAAAGCACAAGCAAACTCCGGCCCTAATTTCCCTCCGGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| 3UTR CCA 72 bp | TCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATaGCTGCTCACTCCCTTCCCTGTCAACACTCAAATT | + |
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Preference number: 3 (lower is better) Translates to: STPHPQPLILAR*LLTPFPVNTQI Trigger: AATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCCCTGTCAACACTCAAATTCTAGTTTACTTCAGTGACTCAGATGGAAACCCAGTTCAGTGTGGGTaGACGGTGATGTCGACGTCG | + |
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Preference number: 3 (lower is better) Translates to: PFPVNTQILVYFSDSDGNPVQCG*TVMSTS Trigger: CGACGTCGACATCACCGTCAACCCACACTGAACTGG...GTTTCCATCTGAGTCACTGAAGTAAACTAGAATTTGAGTGTTGACAGGGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCATGCCTCCGGTTAAAGTaGGACACACCAATGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPCLRLK*DTPMDL Trigger: CAAGTCCATTGGTGTGTCCAACTTTAACCGGAGGCA...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCACCAGAACGATGTCTTTaGACTTGCAGTAGTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPPERCL*TCSSPG Trigger: TCCTGGACTACTGCAAGTCAAAAGACATCGTTCTGG...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| 3UTR-3UTR CAA 90 bp | GACCATACAAATAAAAGACATGGTGGTTACATGTACCTCATAGACCAAAACTTTCCAGTTCAGTGTGGGTaGACGGTGATGTCGACGTCG | + |
|
Preference number: 3 (lower is better) Translates to: DHTNKRHGGYMYLIDQNFPVQCG*TVMSTS Trigger: CGACGTCGACATCACCGTCAACCCACACTGAACTGG...AAAGTTTTGGTCTATGAGGTACATGTAACCACCATGTCTTTTATTTGTATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| 3UTR CAA 72 bp | ACCATGGCCACCCCTCTCCATCCAGTTCAGTGTGGGTaGACGGTGATGTCGACGTCGACCAGAGGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMATPLHPVQCG*TVMSTSTRGDA Trigger: AGCATCACCTCTGGTCGACGTCGACATCACCGTCAACCCACACTGAACTGGATGGAGAGGGGTGGCCATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | CCCCAACCGCTAATCCTTGCAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCTTGGAAACCTCTCCTaGGACAAAGGTTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQPLILARWLLTPFPVNTLGNLS*DKGSKA Trigger: GGCTTTGGAACCTTTGTCCCAGGAGAGGTTTCCAAG...AGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAGCGGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069142.12 |
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| CDS-3UTR CCA 90 bp | GGGGCATTCTCCTCTATCACCGTTGGCTGCCAAGAGCACCATAGGCAACCAGAACTTGGAAACCTCTCCTaGGACAAAGGTTCCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GAFSSITVGCQEHHRQPELGNLS*DKGSKA Trigger: GGCTTTGGAACCTTTGTCCCAGGAGAGGTTTCCAAG...TTCTGGTTGCCTATGGTGCTCTTGGCAGCCAACGGTGATAGAGGAGAATGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| CDS-3UTR CCA 90 bp | GGGGCATTCTCCTCTATCACCGTTGGCTGCCAAGAGCACCATAGGCAACCAGAACCTTACACTTCTCCATaGCCTCCCATGTGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: GAFSSITVGCQEHHRQPEPYTSP*PPMCHR Trigger: TCTGTGACACATGGGAGGCCATGGAGAAGTGTAAGG...TTCTGGTTGCCTATGGTGCTCTTGGCAGCCAACGGTGATAGAGGAGAATGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| CDS-3UTR CCA 90 bp | ATCTCAAGCAGAGGACTGTTCAAGTCCCCTTTCAACTCCACACCCCCAACCGCTCCAAGCACAGGAATGTaGTGGCCATCACTTAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ISSRGLFKSPFNSTPPTAPSTGM*WPSLSS Trigger: GGAACTAAGTGATGGCCACCACATTCCTGTGCTTGG...AGCGGTTGGGGGTGTGGAGTTGAAAGGGGACTTGAACAGTCCTCTGCTTGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069142.12 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATGGCTGCCTTACACTTCTCCATaGCCTCCCATGTGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: SSPLSTPHPQPLILARWLPYTSP*PPMCHR Trigger: TCTGTGACACATGGGAGGCCATGGAGAAGTGTAAGG...CAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGGACTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | CACAGCATCTCCCACATTGCTCCCTCTGAGCGATGTCACAACAAAGGCTTCCGCCATGGCACACAGAGTTaGGTCTTCCAAGAGATATGG | + |
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Preference number: 4 (lower is better) Translates to: HSISHIAPSERCHNKGFRHGTQS*VFQEIW Trigger: CCATATCTCTTGGAAGACCCAACTCTGTGTGCCATG...GCGGAAGCCTTTGTTGTGACATCGCTCAGAGGGAGCAATGTGGGAGATGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR GCA 90 bp | TCAAGTCCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATGGCTGAGTAGTCCAGGAGCTTaGTCTGGTTCAGATAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SSPLSTPHPQPLILARWLSSPGA*SGSDKG Trigger: ACCCTTATCTGAACCAGAGCAAGCTCCTGGACTACT...CAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGGACTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR GCA 90 bp | GCAGAGGACTGTTCAAGTCCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTAGTAGTCCAGGAGCTTaGTCTGGTTCAGATAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: AEDCSSPLSTPHPQPLILSSPGA*SGSDKG Trigger: ACCCTTATCTGAACCAGAGCAAGCTCCTGGACTACT...AAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGGACTTGAACAGTCCTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | AGTCCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATGGCTGCTCAGTTGGACACACCAATaGACTTGGCTAACCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SPLSTPHPQPLILARWLLSWTHQ*TWLTLN Trigger: ATTCAGGGTTAGCCAAGTCCATTGGTGTGTCCAACT...GAGCAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | ATCTCAAGCAGAGGACTGTTCAAGTCCCCTTTCAACTCCACACCCCCAACCGCTTTGCAACCATACTCTTaGAAACCTCTCCTGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: ISSRGLFKSPFNSTPPTALQPYS*KPLLGQ Trigger: TTGTCCCAGGAGAGGTTTCCAAGAGTATGGTTGCAA...AGCGGTTGGGGGTGTGGAGTTGAAAGGGGACTTGAACAGTCCTCTGCTTGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069142.12 |
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| CDS-3UTR TCA 90 bp | AAACACCATGGCCACCCCTCTCCATCCAGTTCAGTGTGGGTTGACGGTGATGTCTGTGCAGGGAAGCTTTaGAGTGTAGAATATATCTTC | + |
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Preference number: 4 (lower is better) Translates to: KHHGHPSPSSSVWVDGDVCAGKL*SVEYIF Trigger: GAAGATATATTCTACACTTCAAAGCTTCCCTGCACA...GACATCACCGTCAACCCACACTGAACTGGATGGAGAGGGGTGGCCATGGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCAAGGCTGGACCAGCTCTaGTCTATGACATGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPRLDQL*SMTCAG Trigger: CCCTGCACATGTCATAGACCAGAGCTGGTCCAGCCT...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGAGGCTGGACCAGCTCTaGTCTATGACATGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FIYVDFRFNPQLWLLGGMRLDQL*SMTCAG Trigger: CCCTGCACATGTCATAGACCAGAGCTGGTCCAGCCT...CATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTAAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | GGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTTTGTCTATATGGTCCTCTGCTGGCAAGTaGAACTCAAAGACCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSTLNSGSWEECSLLSIWSSAGK*NSKTFR Trigger: CCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGA...CCATATAGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | TACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTCCTCTGCTGGCAAGTaGAACTCAAAGACCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: YVDFRFNPQLWLLGGMFSSSAGK*NSKTFR Trigger: CCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGA...AGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCACCAAGCACAGGAATGTaGTGGCCATCACTTAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPPSTGM*WPSLSS Trigger: GGAACTAAGTGATGGCCACCACATTCCTGTGCTTGG...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| CDS-3UTR CCA 90 bp | ACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTTTGTCTCCTTACACTTCTCCATaGCCTCCCATGTGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: TLGSTLNSGSWEECSLLSPYTSP*PPMCHR Trigger: TCTGTGACACATGGGAGGCCATGGAGAAGTGTAAGG...AGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | GACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTTTGTCCATGGCACACAGAGTTaGGTCTTCCAAGAGATATGG | + |
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Preference number: 4 (lower is better) Translates to: DFRFNPQLWLLGGMFSFVHGTQS*VFQEIW Trigger: CCATATCTCTTGGAAGACCCAACTCTGTGTGCCATG...GACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR TCA 90 bp | CTAATCCTTGCAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCTAATGGACACTGGGCAGTaGATAAGGTACAGATCAACA | + |
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Preference number: 4 (lower is better) Translates to: LILARWLLTPFPVNTQILMDTGQ*IRYRST Trigger: TGTTGATCTGTACCTTATTCACTGCCCAGTGTCCAT...TAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | GCAAGTTGGATACAGCGTAAGTATTTAGCAGTTTTTCACCTGTCAGTGAATTTGAGGCTGGACCAGCTCTaGTCTATGACATGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ASWIQRKYLAVFHLSVNLRLDQL*SMTCAG Trigger: CCCTGCACATGTCATAGACCAGAGCTGGTCCAGCCT...CAAATTCACTGACAGGTGAAAAACTGCTAAATACTTACGCTGTATCCAACTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | CTAATCCTTGCAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCTAACACACCAATGGACTTaGCTAACCCTGAATCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LILARWLLTPFPVNTQILTHQWT*LTLNPY Trigger: GTAAGGATTCAGGGTTAGCCAAGTCCATTGGTGTGT...TAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR CCA 90 bp | CTAATCCTTGCAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCTAAGTTGGACACACCAATaGACTTGGCTAACCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: LILARWLLTPFPVNTQILSWTHQ*TWLTLN Trigger: ATTCAGGGTTAGCCAAGTCCATTGGTGTGTCCAACT...TAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
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| CDS-3UTR TCA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCAATGGACACTGGGCAGTaGATAAGGTACAGATCAACA | + |
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Preference number: 4 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPMDTGQ*IRYRST Trigger: TGTTGATCTGTACCTTATTCACTGCCCAGTGTCCAT...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| CDS-3UTR TCA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCATGTGCAGGGAAGCTTTaGAGTGTAGAATATATCTTC | + |
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Preference number: 4 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPCAGKL*SVEYIF Trigger: GAAGATATATTCTACACTTCAAAGCTTCCCTGCACA...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
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| CDS-3UTR GCA 90 bp | GACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTTTGTCTATTTTGGTGGCTTTTaGAACCATACTCTTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DFRFNPQLWLLGGMFSFVYFGGF*NHTLGN Trigger: GTTTCCAAGAGTATGGTTGCAAAAGCCACCAAAATA...GACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069142.12 |
||
| CDS-3UTR GCA 90 bp | GCAAGTTGGATACAGCGTAAGTATTTAGCAGTTTTTCACCTGTCAGTGAATTTGCAGCCTATCTATAACTaGCATGTCCTCTGCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASWIQRKYLAVFHLSVNLQPIYN*HVLCWQ Trigger: TTGCCAGCAGAGGACATGGCAGTTATAGATAGGCTG...CAAATTCACTGACAGGTGAAAAACTGCTAAATACTTACGCTGTATCCAACTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAGCAGTACTGGCACGAATCCCTTTATTTACGTAGACTTTAGGTTCAACAATAAGATCATTGCCTaGCTTCATGGACACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPSSTGTNPFIYVDFRFNNKIIA*LHGHWA Trigger: TGCCCAGTGTCCATGAAGCCAGGCAATGATCTTATT...GTTGAACCTAAAGTCTACGTAAATAAAGGGATTCGTGCCAGTACTGCTAGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| 3UTR CAA 72 bp | TACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTaGGGAGGAATGTTCTCTTTTGTCTATATGGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YVDFRFNPQLWL*GGMFSFVYMVN Trigger: GTTTACCATATAGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCATATTTTGGTGGCTTTTaGAACCATACTCTTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPYFGGF*NHTLGN Trigger: GTTTCCAAGAGTATGGTTGCAAAAGCCACCAAAATA...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCTGTCAACACTCAAATTCTAGTTTACTTCAGTGACTCAGATGGAAACCCCATTTTCATCTGTTaGAATAAGATCATTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFPVNTQILVYFSDSDGNPIFIC*NKIIAW Trigger: CCAGGCAATGATCTTATTCCAACAGATGAAAATGGG...GTTTCCATCTGAGTCACTGAAGTAAACTAGAATTTGAGTGTTGACAGGGAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CCA 90 bp | GACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTTTGTCATATTCATCCAAAAATaGATAATTGGGGTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DFRFNPQLWLLGGMFSFVIFIQK*IIGVSR Trigger: TCTGCTCACCCCAATTATCCATTTTTGGATGAATAT...GACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCACCCATTTTCATCTGTTaGAATAAGATCATTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPPIFIC*NKIIAF Trigger: GAAGGCAATGATCTTATTCCAACAGATGAAAATGGG...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
||
| CDS-3UTR CCA 90 bp | GGAATGTTCTCTTTTGTCTATATGGTAAACCTATCAACATATGCATGCATCTCAAATAAGATCATTGCCTaGCTTCATGGACACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GMFSFVYMVNLSTYACISNKIIA*LHGHWA Trigger: TGCCCAGTGTCCATGAAGCCAGGCAATGATCTTATT...TGAGATGCATGCATATGTTGATAGGTTTACCATATAGACAAAAGAGAACATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CCA 90 bp | GACCATACAAATAAAAGACATGGTGGTTACATGTACCTCATAGACCAAAACTTTACACACCAATGGACTTaGCTAACCCTGAATCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: DHTNKRHGGYMYLIDQNFTHQWT*LTLNPY Trigger: GTAAGGATTCAGGGTTAGCCAAGTCCATTGGTGTGT...AAAGTTTTGGTCTATGAGGTACATGTAACCACCATGTCTTTTATTTGTATGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTTACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGATATTCATCCAAAAATaGATAATTGGGGTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIYVDFRFNPQLWLLGGMIFIQK*IIGVSR Trigger: TCTGCTCACCCCAATTATCCATTTTTGGATGAATAT...CATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTAAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGTTCTCTTTTGTCTATATGGTAAACCTATCAACATATGCATGCATCTCATGTGCAGGGAAGCTTTaGAGTGTAGAATATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GMFSFVYMVNLSTYACISCAGKL*SVEYIF Trigger: GAAGATATATTCTACACTTCAAAGCTTCCCTGCACA...TGAGATGCATGCATATGTTGATAGGTTTACCATATAGACAAAAGAGAACATTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CCA 90 bp | GACCATACAAATAAAAGACATGGTGGTTACATGTACCTCATAGACCAAAACTTTCCCATTTTCATCTGTTaGAATAAGATCATTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DHTNKRHGGYMYLIDQNFPIFIC*NKIIAW Trigger: CCAGGCAATGATCTTATTCCAACAGATGAAAATGGG...AAAGTTTTGGTCTATGAGGTACATGTAACCACCATGTCTTTTATTTGTATGGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATGGCTGCTCACTAAGCTTTCTCAGGGATaGTTCCAAGCAAGGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSTPHPQPLILARWLLTKLSQG*FQARLD Trigger: GTCCAGCCTTGCTTGGAACAATCCCTGAGAAAGCTT...AGTGAGCAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS CCA 90 bp | GTGCTTTTCCGCCATGGCACACAGAGTTGGGTCTTCCAAGAGATATaGGGCATTCTCCTCTATCCAGTTCTTACACCGTTGGCTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLFRHGTQSWVFQEI*GILLYPVLTPLAAK Trigger: CTTGGCAGCCAACGGTGTAAGAACTGGATAGAGGAGAATGCCCCATATCTCTTGGAAGACCCAACTCTGTGTGCCATGGCGGAAAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGACTGTTCAAGTCCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTTGCCTCCGGTTAAAGTaGGACACACCAATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AEDCSSPLSTPHPQPLILCLRLK*DTPMDL Trigger: CAAGTCCATTGGTGTGTCCAACTTTAACCGGAGGCA...AAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGGACTTGAACAGTCCTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTTTCAACTCCACACCCCCAACCGCTAATCCTTGCAAGATGGCTGCTCACTTTCTCATTGAAACTCTaGGTGACAATGACAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSTPHPQPLILARWLLTFSLKL*VTMTIP Trigger: TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAA...AGTGAGCAGCCATCTTGCAAGGATTAGCGGTTGGGGGTGTGGAGTTGAAAGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS CCA 90 bp | TCGGTAGTTTCTGTTCAGCCTATCTATAACTGCCATGTCCTCTGCTaGCAAGTGGAACTCAAAGACCTTCAGGTTCTCCTTGATCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVVSVQPIYNCHVLC*QVELKDLQVLLDPL Trigger: AAGCGGATCAAGGAGAACCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGACATGGCAGTTATAGATAGGCTGAACAGAAACTACCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS GCA 90 bp | ATATCGGTAGTTTCTGTTCAGCCTATCTATAACTGCCATGTCCTCTaGTGGCAAGTGGAACTCAAAGACCTTCAGGTTCTCCTTGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: ISVVSVQPIYNCHVL*WQVELKDLQVLLDP Trigger: CGGATCAAGGAGAACCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGACATGGCAGTTATAGATAGGCTGAACAGAAACTACCGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS CCA 90 bp | TTTCTGTTCAGCCTATCTATAACTGCCATGTCCTCTGCTGGCAAGTaGAACTCAAAGACCTTCAGGTTCTCCTTGATCCGCTTCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSLSITAMSSAGK*NSKTFRFSLIRFSL Trigger: CAATGAGAAGCGGATCAAGGAGAACCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGACATGGCAGTTATAGATAGGCTGAACAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCAAAGCTTTCTCAGGGATaGTTCCAAGCAAGGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPKLSQG*FQARLD Trigger: GTCCAGCCTTGCTTGGAACAATCCCTGAGAAAGCTT...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
||
| CDS-3UTR CAA 90 bp | AATCCTTGCAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCTAGTCCAGAACGATGTCTTTaGACTTGCAGTAGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NPCKMAAHSLPCQHSNSSPERCL*TCSSPG Trigger: TCCTGGACTACTGCAAGTCAAAAGACATCGTTCTGG...ACTAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTTTTGTCTCCATGGCACACAGAGTaGGGTCTTCCAAGAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: TLGSTLNSGSWEECSLLSPWHTE*GLPRDM Trigger: CATATCTCTTGGAAGACCCAACTCTGTGTGCCATGG...AGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCATTTGCAACCATACTCTaGGAAACCTCTCCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPFATIL*ETSPGT Trigger: TGTCCCAGGAGAGGTTTCCAAGAGTATGGTTGCAAA...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGAAGCTTTCTCAGGGATaGTTCCAAGCAAGGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FIYVDFRFNPQLWLLGGMKLSQG*FQARLD Trigger: GTCCAGCCTTGCTTGGAACAATCCCTGAGAAAGCTT...CATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | TACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTGTTGGAATAAGATCATaGCCTGGCTTCATGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: YVDFRFNPQLWLLGGMFSVGIRS*PGFMDT Trigger: AGTGTCCATGAAGCCAGGCAATGATCTTATTCCAAC...AGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | CTAATCCTTGCAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCTAGTTGGAATAAGATCATaGCCTGGCTTCATGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: LILARWLLTPFPVNTQILVGIRS*PGFMDT Trigger: AGTGTCCATGAAGCCAGGCAATGATCTTATTCCAAC...TAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCAGTTGGAATAAGATCATaGCCTTCATGGACACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPVGIRS*PSWTLG Trigger: GCCCAGTGTCCATGAAGGCAATGATCTTATTCCAAC...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGCCAGAACGATGTCTTTaGACTTGCAGTAGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FIYVDFRFNPQLWLLGGMPERCL*TCSSPG Trigger: TCCTGGACTACTGCAAGTCAAAAGACATCGTTCTGG...CATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTAAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTTGCAAGATGGCTGCTCACTCCCTTCCCTGTCAACACTCAAATTCTAGTGCATCTATAGCTATTTaGGTGGCTTTTGCAACCATA | + |
|
Preference number: 5 (lower is better) Translates to: NPCKMAAHSLPCQHSNSSASIAI*VAFATI Trigger: TATGGTTGCAAAAGCCACCAAAATAGCTATAGATGC...ACTAGAATTTGAGTGTTGACAGGGAAGGGAGTGAGCAGCCATCTTGCAAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069142.12 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTGGATACAGCGTAAGTATTTAGCAGTTTTTCACCTGTCAGTGAATTTGCCATGGCACACAGAGTaGGGTCTTCCAAGAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: ASWIQRKYLAVFHLSVNLPWHTE*GLPRDM Trigger: CATATCTCTTGGAAGACCCAACTCTGTGTGCCATGG...CAAATTCACTGACAGGTGAAAAACTGCTAAATACTTACGCTGTATCCAACTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTCCTTGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCAGCATCTATAGCTATTTaGGTGGCTTTTGCAACCATA | + |
|
Preference number: 5 (lower is better) Translates to: RFSLIRFSLKLLVTMTIPASIAI*VAFATI Trigger: TATGGTTGCAAAAGCCACCAAAATAGCTATAGATGC...TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159566.2 |
||
| CDS-3UTR CAA 90 bp | TACGTAGACTTTAGGTTCAACCCTCAACTCTGGCTCTTGGGAGGAATGTTCTCTATGTGCAGGGAAGCTTaGAAGTGTAGAATATATCTT | + |
|
Preference number: 5 (lower is better) Translates to: YVDFRFNPQLWLLGGMFSMCREA*KCRIYL Trigger: AAGATATATTCTACACTTCAAAGCTTCCCTGCACAT...AGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTGAACCTAAAGTCTACGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS CCA 90 bp | ATTTTCATCTGTTGGAATAAGATCATTGCCTGGCTTCATGGACACTaGGCAGTGAATAAGGTACAGATCAACATAATCCAGCTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IFICWNKIIAWLHGH*AVNKVQINIIQLKL Trigger: AAGCTTCAGCTGGATTATGTTGATCTGTACCTTATTCACTGCCCAGTGTCCATGAAGCCAGGCAATGATCTTATTCCAACAGATGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS-3UTR CAA 90 bp | GACCATACAAATAAAAGACATGGTGGTTACATGTACCTCATAGACCAAAACTTTTTTGCAACCATACTCTaGGAAACCTCTCCTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DHTNKRHGGYMYLIDQNFFATIL*ETSPGT Trigger: TGTCCCAGGAGAGGTTTCCAAGAGTATGGTTGCAAA...AAAGTTTTGGTCTATGAGGTACATGTAACCACCATGTCTTTTATTTGTATGGTC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069142.12 |
||
| CDS-3UTR CAA 90 bp | GACCATACAAATAAAAGACATGGTGGTTACATGTACCTCATAGACCAAAACTTTTTCTCATTGAAACTCTaGGTGACAATGACAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DHTNKRHGGYMYLIDQNFFSLKL*VTMTIP Trigger: TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAA...AAAGTTTTGGTCTATGAGGTACATGTAACCACCATGTCTTTTATTTGTATGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS CCA 72 bp | CGCCATGGCACACAGAGTTGGGTCTTCCAAGAGATATaGGGCATTCTCCTCTATCCAGTTCTTACACCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RHGTQSWVFQEI*GILLYPVLTPL Trigger: CAACGGTGTAAGAACTGGATAGAGGAGAATGCCCCATATCTCTTGGAAGACCCAACTCTGTGTGCCATGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS CCA 72 bp | GGTGGCTTTTGCAACCATACTCTTGGAAACCTCTCCTaGGACAAAGGTTCCAAAGCCAAGCACAGGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGFCNHTLGNLS*DKGSKAKHRNV Trigger: CACATTCCTGTGCTTGGCTTTGGAACCTTTGTCCCAGGAGAGGTTTCCAAGAGTATGGTTGCAAAAGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000159566.2 |
||
| CDS CAA 90 bp | ATGTCCTCTGCTGGCAAGTGGAACTCAAAGACCTTCAGGTTCTCCTaGATCCGCTTCTCATTGAAACTCTTGGTGACAATGACAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MSSAGKWNSKTFRFS*IRFSLKLLVTMTIP Trigger: TGGGATTGTCATTGTCACCAAGAGTTTCAATGAGAAGCGGATCAAGGAGAACCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS GCA 72 bp | GTTTCTGTTCAGCCTATCTATAACTGCCATGTCCTCTaGTGGCAAGTGGAACTCAAAGACCTTCAGGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VSVQPIYNCHVL*WQVELKDLQVL Trigger: GAGAACCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGACATGGCAGTTATAGATAGGCTGAACAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS CCA 72 bp | TCTGTTCAGCCTATCTATAACTGCCATGTCCTCTGCTaGCAAGTGGAACTCAAAGACCTTCAGGTTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVQPIYNCHVLC*QVELKDLQVLL Trigger: AAGGAGAACCTGAAGGTCTTTGAGTTCCACTTGCCAGCAGAGGACATGGCAGTTATAGATAGGCTGAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||
| CDS GCA 72 bp | GCGGAATCCAGCATCTATAGCTATTTTGGTGGCTTTTaGAACCATACTCTTGGAAACCTCTCCTGGGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: AESSIYSYFGGF*NHTLGNLSWDK Trigger: TTTGTCCCAGGAGAGGTTTCCAAGAGTATGGTTGCAAAAGCCACCAAAATAGCTATAGATGCTGGATTCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000159566.2 |
||
| CDS CAA 72 bp | TCTATAGCTATTTTGGTGGCTTTTGCAACCATACTCTaGGAAACCTCTCCTGGGACAAAGGTTCCAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SIAILVAFATIL*ETSPGTKVPKP Trigger: TGGCTTTGGAACCTTTGTCCCAGGAGAGGTTTCCAAGAGTATGGTTGCAAAAGCCACCAAAATAGCTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000159566.2 |
||
| CDS CCA 72 bp | TGTTGGAATAAGATCATTGCCTGGCTTCATGGACACTaGGCAGTGAATAAGGTACAGATCAACATAATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CWNKIIAWLHGH*AVNKVQINIIQ Trigger: CTGGATTATGTTGATCTGTACCTTATTCACTGCCCAGTGTCCATGAAGCCAGGCAATGATCTTATTCCAACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069142.12 ENSMUST00000162800.8 |
||