Pregenerated sensors for AKR1C6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021210Ensembl transcript IDs: ENSMUST00000021630.15, ENSMUST00000156277.2, ENSMUST00000220941.2, ENSMUST00000223118.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTAGTTCAATCCCTACACACACATTTCAAAGTAAATCCTTCCAAGATGCACATGCAATGCAGTGACATCTaGCACAAGGCACAAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: LVQSLHTHFKVNPSKMHMQCSDI*HKAQNG Trigger: TCCATTTTGTGCCTTGTGCCAGATGTCACTGCATTG...CATGTGCATCTTGGAAGGATTTACTTTGAAATGTGTGTGTAGGGATTGAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTCAATCCCTACACACACATTTCAAAGTAAATCCTTCCAAGATGCACATGTATACACTCTTCCAATaGAGTGACATCTGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LVQSLHTHFKVNPSKMHMYTLFQ*SDIWHK Trigger: CTTGTGCCAGATGTCACTGCATTGGAAGAGTGTATA...CATGTGCATCTTGGAAGGATTTACTTTGAAATGTGTGTGTAGGGATTGAACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR GCA 90 bp | TATACACTCTTCCAATGCAGTGACATCTGGCACAAGGCACAAAATGGACCTCCAAGGATCTTCTCCAGCTaGCTGCGGTTAAAGTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: YTLFQCSDIWHKAQNGPPRIFSS*LRLKLD Trigger: GTCCAACTTTAACCGCAGGCAGCTGGAGAAGATCCT...TGGAGGTCCATTTTGTGCCTTGTGCCAGATGTCACTGCATTGGAAGAGTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR GCA 90 bp | AACTGGATTATCCAAAAGAACAGGAGAGCTCTGATCAACCCATTGTTTTTCACGAGGATCTTCTCCAGCTaGCTGCGGTTAAAGTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: NWIIQKNRRALINPLFFTRIFSS*LRLKLD Trigger: GTCCAACTTTAACCGCAGGCAGCTGGAGAAGATCCT...CGTGAAAAACAATGGGTTGATCAGAGCTCTCCTGTTCTTTTGGATAATCCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220941.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCCAGAATTGCTCAGAAGCTTGGATTAGGGTGATATGTAATCATCACATTCCTTGCATTTCTCCATaGCTTCCCAGGTGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: QSQNCSEAWIRVICNHHIPCISP*LPRCHR Trigger: TCTGTGACACCTGGGAAGCCATGGAGAAATGCAAGG...AATGTGATGATTACATATCACCCTAATCCAAGCTTCTGAGCAATTCTGGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR TCA 90 bp | ATCCCTACACACACATTTCAAAGTAAATCCTTCCAAGATGCACATGGCTCAGGACCATTGGGAAATGAATaGGGTACAGGTCCACATAGT | + |
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Preference number: 4 (lower is better) Translates to: IPTHTFQSKSFQDAHGSGPLGNE*GTGPHS Trigger: ACTATGTGGACCTGTACCTCATTCATTTCCCAATGG...TCCTGAGCCATGTGCATCTTGGAAGGATTTACTTTGAAATGTGTGTGTAGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR TCA 90 bp | GAATACTCTTCCTATACACTCTTCCAATGCAGTGACATCTGGCACAAGGCACAAAGAACAGGAGAGCTCTaGTCAACCCATTGTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: EYSSYTLFQCSDIWHKAQRTGEL*STHCFS Trigger: TGAAAAACAATGGGTTGATCAGAGCTCTCCTGTTCT...TTGTGCCTTGTGCCAGATGTCACTGCATTGGAAGAGTGTATAGGAAGAGTATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR CCA 90 bp | CATTTTGAGAATACTCTTCCTATACACTCTTCCAATGCAGTGACATCTGGCACACGGCTTCATGGCCATTaGGAAATGAATGAGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: HFENTLPIHSSNAVTSGTRLHGH*EMNEVQ Trigger: CTGTACCTCATTCATTTCCCAATGGCCATGAAGCCG...TGTGCCAGATGTCACTGCATTGGAAGAGTGTATAGGAAGAGTATTCTCAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR CCA 90 bp | TCATCACATTTTGAGAATACTCTTCCTATACACTCTTCCAATGCAGTGACATCTTCTCAGAGAAACTCTTaGCGAGGACCACAACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SSHFENTLPIHSSNAVTSSQRNS*RGPQPH Trigger: GTGGGGTTGTGGTCCTCGCCAAGAGTTTCTCTGAGA...AGATGTCACTGCATTGGAAGAGTGTATAGGAAGAGTATTCTCAAAATGTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR CCA 90 bp | ACATGCTTGGCATGTATCTCCCAAATTTTCCTTCAACTGATTCTTCATGTGTTTTCTCAGAGAAACTCTTaGCGAGGACCACAACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TCLACISQIFLQLILHVFSQRNS*RGPQPH Trigger: GTGGGGTTGTGGTCCTCGCCAAGAGTTTCTCTGAGA...AAACACATGAAGAATCAGTTGAAGGAAAATTTGGGAGATACATGCCAAGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223118.2 |
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| CDS-3UTR TCA 90 bp | ATTAGTTCAATCCCTACACACACATTTCAAAGTAAATCCTTCCAAGATGCACATCTGGAGTTGCTTCAATaGCTGTTCCAAGCAGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ISSIPTHTFQSKSFQDAHLELLQ*LFQADP Trigger: CGGGTCTGCTTGGAACAGTCATTGAAGCAACTCCAG...ATGTGCATCTTGGAAGGATTTACTTTGAAATGTGTGTGTAGGGATTGAACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR TCA 90 bp | ACATGCTTGGCATGTATCTCCCAAATTTTCCTTCAACTGATTCTTCATGTGTTTAGAACAGGAGAGCTCTaGTCAACCCATTGTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TCLACISQIFLQLILHVFRTGEL*STHCFS Trigger: TGAAAAACAATGGGTTGATCAGAGCTCTCCTGTTCT...AAACACATGAAGAATCAGTTGAAGGAAAATTTGGGAGATACATGCCAAGCATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223118.2 |
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| 3UTR CAA 72 bp | GAAGCTTGGATTAGGGTGATATGTAATCATCACATTTaGAGAATACTCTTCCTATACACTCTTCCAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: EAWIRVICNHHI*RILFLYTLPMQ Trigger: CTGCATTGGAAGAGTGTATAGGAAGAGTATTCTCAAAATGTGATGATTACATATCACCCTAATCCAAGCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR CCA 90 bp | ATTAGTTCAATCCCTACACACACATTTCAAAGTAAATCCTTCCAAGATGCACATAATGGAAAATCAGGATaGTCCTTAAAGCTAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: ISSIPTHTFQSKSFQDAHNGKSG*SLKLEP Trigger: TGGTTCTAGCTTTAAGGACCATCCTGATTTTCCATT...ATGTGCATCTTGGAAGGATTTACTTTGAAATGTGTGTGTAGGGATTGAACTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| 3UTR CAA 72 bp | AGTATATTGATCTATGTTTTCCCAGAAGAGACATGCTaGGCATGTATCTCCCAAATTTTCCTTCAACTGATT | + |
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Preference number: 4 (lower is better) Translates to: SILIYVFPEETC*ACISQIFLQLI Trigger: AATCAGTTGAAGGAAAATTTGGGAGATACATGCCAAGCATGTCTCTTCTGGGAAAACATAGATCAATATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223118.2 |
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| CDS-3UTR CAA 90 bp | GACATGCTTGGCATGTATCTCCCAAATTTTCCTTCAACTGATTCTTCATGTGTTTTCTCAGAGAAACTCTaGGCGAGGACCACAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: DMLGMYLPNFPSTDSSCVFSEKL*ARTTTP Trigger: TGGGGTTGTGGTCCTCGCCAAGAGTTTCTCTGAGAA...AACACATGAAGAATCAGTTGAAGGAAAATTTGGGAGATACATGCCAAGCATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223118.2 |
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| CDS-3UTR CAA 90 bp | AACTGGATTATCCAAAAGAACAGGAGAGCTCTGATCAACCCATTGTTTTTCACGGACACCCCAATGGACTaGGCCAATCCTTTGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: NWIIQKNRRALINPLFFTDTPMD*ANPLMC Trigger: ACACATCAAAGGATTGGCCAAGTCCATTGGGGTGTC...CGTGAAAAACAATGGGTTGATCAGAGCTCTCCTGTTCTTTTGGATAATCCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000220941.2 |
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| CDS TCA 90 bp | GCAGACCCGTACGAGTTCTGGACGATGAAAAGTACACCAAACCTTTaGTGTGTAAAATATATCTTCCCTCTTCACAGTGCCATCTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: ADPYEFWTMKSTPNL*CVKYIFPLHSAICY Trigger: ATAGCAGATGGCACTGTGAAGAGGGAAGATATATTTTACACATCAAAGGTTTGGTGTACTTTTCATCGTCCAGAACTCGTACGGGTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021630.15 ENSMUST00000156277.2 |
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| CDS-3UTR CAA 90 bp | TCATCACATTTTGAGAATACTCTTCCTATACACTCTTCCAATGCAGTGACATCTTTCTCAGAGAAACTCTaGGCGAGGACCACAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: SSHFENTLPIHSSNAVTSFSEKL*ARTTTP Trigger: TGGGGTTGTGGTCCTCGCCAAGAGTTTCTCTGAGAA...AGATGTCACTGCATTGGAAGAGTGTATAGGAAGAGTATTCTCAAAATGTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS-3UTR CAA 90 bp | CAGAGCCAGAATTGCTCAGAAGCTTGGATTAGGGTGATATGTAATCATCACATTTTCCATTTTCATCTTTaGGGAGATAATTTTCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: QSQNCSEAWIRVICNHHIFHFHL*GDNFLP Trigger: CGGGAGAAAATTATCTCCCAAAAGATGAAAATGGAA...AATGTGATGATTACATATCACCCTAATCCAAGCTTCTGAGCAATTCTGGCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021630.15 |
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| CDS TCA 72 bp | GTACAGGTCCACATAGTCCAACTGGAGTTGCTTCAATaGCTGTTCCAAGCAGACCCGTACGAGTTCTGGACG | + |
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Preference number: 6 (lower is better) Translates to: VQVHIVQLELLQ*LFQADPYEFWT Trigger: CGTCCAGAACTCGTACGGGTCTGCTTGGAACAGTCATTGAAGCAACTCCAGTTGGACTATGTGGACCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021630.15 ENSMUST00000156277.2 |
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| CDS GCA 72 bp | AGCTTCTGTAGCCTTACTCTTAGGTACCTCTTGAGGTaGATAGGTACCAAACCCCAGTATAGGGATGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SFCSLTLRYLLR*IGTKPQYRDEV Trigger: CACTTCATCCCTATACTGGGGTTTGGTACCTATGCACCTCAAGAGGTACCTAAGAGTAAGGCTACAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021630.15 ENSMUST00000220941.2 |
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| CDS CAA 90 bp | AGCAGACCCGTACGAGTTCTGGACGATGAAAAGTACACCAAACCTTaGATGTGTAAAATATATCTTCCCTCTTCACAGTGCCATCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SRPVRVLDDEKYTKP*MCKIYLPSSQCHLL Trigger: TAGCAGATGGCACTGTGAAGAGGGAAGATATATTTTACACATCAAAGGTTTGGTGTACTTTTCATCGTCCAGAACTCGTACGGGTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021630.15 ENSMUST00000156277.2 |
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