Pregenerated sensors for AKR1C19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071551Ensembl transcript IDs: ENSMUST00000081326.7, ENSMUST00000118663.9, ENSMUST00000129751.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGAGGTCAGGGACTCCTATGGAAGAGTTAGGGGAAGGACTGAATaGGCTGAAGGGGATAGCAACCTCATACGAAGACCAACAGTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: AEVRDSYGRVRGRTE*AEGDSNLIRRPTVS Trigger: TGACACTGTTGGTCTTCGTATGAGGTTGCTATCCCCTTCAGCTCATTCAGTCCTTCCCCTAACTCTTCCATAGGAGTCCCTGACCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CCA 90 bp | CCAGAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTaGTCAGTCAAGAACTCTTCACCTTCCATACTAAGAACCATAGAC | + |
|
Preference number: 1 (lower is better) Translates to: PELCYLDAIREARHH*SVKNSSPSILRTID Trigger: GTCTATGGTTCTTAGTATGGAAGGTGAAGAGTTCTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR GCA 90 bp | ATTTCTCTTGAAGGACAGGTCACTCAATTTAACAACATATCACTATaGCCAAAGATCAGGGCCTTGTTCAACCCTCCTGTCACCTCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: ISLEGQVTQFNNISL*PKIRALFNPPVTSL Trigger: CAAAGAGGTGACAGGAGGGTTGAACAAGGCCCTGATCTTTGGGCATAGTGATATGTTGTTAAATTGAGTGACCTGTCCTTCAAGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR TCA 90 bp | TCTATCCCCAGAGTTCCACAGAAGTTACTTTTTGGTCTCAATCATTaGAAAGGAAACAAACAACCGACAATCCTGACCAAAGAAAGATCT | + |
|
Preference number: 1 (lower is better) Translates to: SIPRVPQKLLFGLNH*KGNKQPTILTKERS Trigger: AGATCTTTCTTTGGTCAGGATTGTCGGTTGTTTGTTTCCTTTTCAATGATTGAGACCAAAAAGTAACTTCTGTGGAACTCTGGGGATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR GCA 90 bp | GATCCCAAGGTGAAGGTGTCATTGGATGGCCTTTCCTGTAATCTTTaGTGTATTTTTATCTCAGTATTTCTTTTAGTCAGGAAGAATTAT | + |
|
Preference number: 1 (lower is better) Translates to: DPKVKVSLDGLSCNL*CIFISVFLLVRKNY Trigger: ATAATTCTTCCTGACTAAAAGAAATACTGAGATAAAAATACAGCAAAGATTACAGGAAAGGCCATCCAATGACACCTTCACCTTGGGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTGACCCTAGCTGAGACTTCAAGCAGCGGCAAATGGGCAAATGCAGAGAGTTGTGTCTCCTTCCTTTaGGGCAGCACTACCCGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GVTLAETSSSGKWANAESCVSFL*GSTTRE Trigger: TTCACGGGTAGTGCTGCCTCAAAGGAAGGAGACACA...ACTCTCTGCATTTGCCCATTTGCCGCTGCTTGAAGTCTCAGCTAGGGTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTGACCCTAGCTGAGACTTCAAGCAGCGGCAAATGGGCAAATGCAGAGAGTAGGGGAAGGACTGAATaGGCTGAAGGGGATAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: GVTLAETSSSGKWANAESRGRTE*AEGDSN Trigger: GTTGCTATCCCCTTCAGCTCATTCAGTCCTTCCCCT...ACTCTCTGCATTTGCCCATTTGCCGCTGCTTGAAGTCTCAGCTAGGGTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGACCCTAGCTGAGACTTCAAGCAGCGGCAAATGGGCAAATGCAGAGAGTATACCCATTGAGTCCTaGAAGCCTCTCACACCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GVTLAETSSSGKWANAESIPIES*KPLTPQ Trigger: CTGGGGTGTGAGAGGCTTCCAGGACTCAATGGGTAT...ACTCTCTGCATTTGCCCATTTGCCGCTGCTTGAAGTCTCAGCTAGGGTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGACAAGGCAAGGCTACCTACTCCCTGTCTACTCAATACAGTGTGAAGTTCTACATCGCTGCAGGCACTaGTTTCCCTCTGCTCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GTRQGYLLPVYSIQCEVLHRCRH*FPSAPA Trigger: AGCAGGAGCAGAGGGAAATCAGTGCCTGCAGCGATG...TAGAACTTCACACTGTATTGAGTAGACAGGGAGTAGGTAGCCTTGCCTTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGACAAGGCAAGGCTACCTACTCCCTGTCTACTCAATACAGTGTGAAGTTCTATGGAAACCCAGCAGTTaGCTTCTGCAGGGATGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GTRQGYLLPVYSIQCEVLWKPSS*LLQGWG Trigger: GCCCCATCCCTGCAGAAGGCAACTGCTGGGTTTCCA...TAGAACTTCACACTGTATTGAGTAGACAGGGAGTAGGTAGCCTTGCCTTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGACCCTAGCTGAGACTTCAAGCAGCGGCAAATGGGCAAATGCAGAGAGTCTCCTGTCACCTCTTTaGCCCCATACTGTTTCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GVTLAETSSSGKWANAESLLSPL*PHTVSV Trigger: TACTGAAACAGTATGGGGCCAAAGAGGTGACAGGAG...ACTCTCTGCATTTGCCCATTTGCCGCTGCTTGAAGTCTCAGCTAGGGTCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | TCACTCCCCAATCCAGAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACTGGTGGACACAGCTCTaGCTGAAGGAGGGTTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLPNPELCYLDAIREARHWWTQL*LKEGCQ Trigger: CTGACAACCCTCCTTCAGCCAGAGCTGTGTCCACCA...GTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTCTGGATTGGGGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGCCAGGCACCACTGGTCAGTCAAGAACTCTTCACCTTCCATACTAAGAACAGACACTTTGAGCTGTaGGTAGAAGTCATGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: GSQAPLVSQELFTFHTKNRHFEL*VEVMTQ Trigger: CTGTGTCATGACTTCTACGCACAGCTCAAAGTGTCT...GTTCTTAGTATGGAAGGTGAAGAGTTCTTGACTGACCAGTGGTGCCTGGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGGCTTTTTCCTAGTGATGTGGTGATGCTTCAACATGCAAATATCGACATACCAGCAGTTGCCTTCTaGAGGGATGGGGCTCGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KRLFPSDVVMLQHANIDIPAVAF*RDGARE Trigger: TTCCCGAGCCCCATCCCTGCAGAAGGCAACTGCTGG...TATGTCGATATTTGCATGTTGAAGCATCACCACATCACTAGGAAAAAGCCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CAA 90 bp | ATCAAGTCAGAGACATGGTTGATTTCACCAGCTGGCGGTTTGAGCTaGAGTAAGACATTTATAAAAACCCAGACAGGGGCCATGTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: IKSETWLISPAGGLS*SKTFIKTQTGAMSS Trigger: GGAGGACATGGCCCCTGTCTGGGTTTTTATAAATGTCTTACTCAAGCTCAAACCGCCAGCTGGTGAAATCAACCATGTCTCTGACTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | AACATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCGTAAGCCTCCACTTCTaGCTCAGGGGATTGCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: NIKLNGNVEQFHLNQGQGVSLHF*LRGLRS Trigger: GCTCCGCAATCCCCTGAGCCAGAAGTGGAGGCTTAC...GCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTGACCCTAGCTGAGACTTCAAGCAGCGGCAAATGGGCAAATGCAGAGAGTCAACATCAAATTGAATaGAAACGTAGAGCAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GVTLAETSSSGKWANAESQHQIE*KRRAIP Trigger: TGGAATTGCTCTACGTTTCCATTCAATTTGATGTTG...ACTCTCTGCATTTGCCCATTTGCCGCTGCTTGAAGTCTCAGCTAGGGTCACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CAA 90 bp | GTCACTCAATTTAACAACATATCACTATGCCCAAAGATCAGGGCCTaGTTCAACCCTCCTGTCACCTCTTTGGCCCCATACTGTTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VTQFNNISLCPKIRA*FNPPVTSLAPYCFS Trigger: ACTGAAACAGTATGGGGCCAAAGAGGTGACAGGAGGGTTGAACAAGGCCCTGATCTTTGGGCATAGTGATATGTTGTTAAATTGAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTCCCCAATCCAGAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCAAGACACTTTGAGCTGTaGGTAGAAGTCATGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: TPQSRTLLFRCYKGSQAPRHFEL*VEVMTQ Trigger: CTGTGTCATGACTTCTACGCACAGCTCAAAGTGTCT...TGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTCTGGATTGGGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTATATCCCCCTCGTAAATTAGAACAGTCAATAAAAGTCACCAACATGTTCTGGTGGACACAGCTCTaGCTGAAGGAGGGTTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RLYPPRKLEQSIKVTNMFWWTQL*LKEGCQ Trigger: CTGACAACCCTCCTTCAGCCAGAGCTGTGTCCACCA...GAACATGTTGGTGACTTTTATTGACTGTTCTAATTTACGAGGGGGATATAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CAA 90 bp | TTGCTAATCAAGTCAGAGACATGGTTGATTTCACCAGCTGGCGGTTaGAGCTTGAGTAAGACATTTATAAAAACCCAGACAGGGGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: LLIKSETWLISPAGG*SLSKTFIKTQTGAM Trigger: CATGGCCCCTGTCTGGGTTTTTATAAATGTCTTACTCAAGCTCAAACCGCCAGCTGGTGAAATCAACCATGTCTCTGACTTGATTAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR GCA 90 bp | CATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCAAGCCCTCTGGGCTTCTTaGTTGTCTTCTCCCATACCT | + |
|
Preference number: 2 (lower is better) Translates to: HQIEWKRRAIPLKSGTRQALWAS*LSSPIP Trigger: AGGTATGGGAGAAGACAAGCAAGAAGCCCAGAGGGC...TTGCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR TCA 90 bp | AACATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCACCCCATTACTTCACTaGGAGCCCTGTCTGTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: NIKLNGNVEQFHLNQGQGTPLLH*EPCLFT Trigger: AGTAAACAGACAGGGCTCTCAGTGAAGTAATGGGGT...GCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCAAATTCTCCTAGCCCTCTaGGCTTCTTGCTTGTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HQIEWKRRAIPLKSGTRQILLAL*ASCLSS Trigger: AGAAGACAAGCAAGAAGCCCAGAGGGCTAGGAGAAT...TTGCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAAGACACTTTGAGCTGTaGGTAGAAGTCATGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: TMSKNDENVVTYVPDWWTRHFEL*VEVMTQ Trigger: CTGTGTCATGACTTCTACGCACAGCTCAAAGTGTCT...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTTCTACATTTGGGCATTTCAGCTAAGGTCATACCCATTGAGTCCTGGAAGATCCGGGTAGAAGAATaGTTTCAGCAGTTAGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LFLHLGISAKVIPIESWKIRVEE*FQQLGK Trigger: TTTTCCTAACTGCTGAAACCATTCTTCTACCCGGAT...CTTCCAGGACTCAATGGGTATGACCTTAGCTGAAATGCCCAAATGTAGAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTTCTACATTTGGGCATTTCAGCTAAGGTCATACCCATTGAGTCCTGGAAGCAATTAACCTTGACATaGTTAATGAAGCCTAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LFLHLGISAKVIPIESWKQLTLT*LMKPRT Trigger: GGTTCTAGGCTTCATTAACCATGTCAAGGTTAATTG...CTTCCAGGACTCAATGGGTATGACCTTAGCTGAAATGCCCAAATGTAGAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCTATATCCCCCTCGTAAATTAGAACAGTCAATAAAAGTCACCAACATGTTCATCACTAACCTAATTTaGGAAACCGTAAGGGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: RLYPPRKLEQSIKVTNMFITNLI*ETVRDH Trigger: ATGGTCCCTTACGGTTTCTCAAATTAGGTTAGTGAT...GAACATGTTGGTGACTTTTATTGACTGTTCTAATTTACGAGGGGGATATAGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR GCA 90 bp | AACATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCACTCTGTTATTTAGATaGTATAAGGGAAGCCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: NIKLNGNVEQFHLNQGQGTLLFR*YKGSQA Trigger: TGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGT...GCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCAAAACTTGGAAAAGAATTaGAAACCCAGCAGTTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HQIEWKRRAIPLKSGTRQNLEKN*KPSSCL Trigger: AAGGCAACTGCTGGGTTTCCAATTCTTTTCCAAGTT...TTGCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTCAGTAATGTCTCACTCCCCAATCCAGAACTCTGTTATTTAGATGCTATAAACAACCGACAATCCTaGCCAAAGAAAGATCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: CFSNVSLPNPELCYLDAINNRQS*PKKDLY Trigger: ATAAAGATCTTTCTTTGGTCAGGATTGTCGGTTGTT...TATAGCATCTAAATAACAGAGTTCTGGATTGGGGAGTGAGACATTACTGAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR TCA 72 bp | CCGGGGCCCTGCCTCCTGTTCTGTGTCTCCTTCCTTTaGGGCAGCACTACCCGTGAACTGGGGCTCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGPCLLFCVSFL*GSTTRELGLLA Trigger: AGCCAAGAGCCCCAGTTCACGGGTAGTGCTGCCTCAAAGGAAGGAGACACAGAACAGGAGGCAGGGCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CCA 72 bp | GTAGTGACTTATGTTCCGGACTGGTGGACACAGCTCTaGCTGAAGGAGGGTTGTCAGGCGGCTCAGACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVTYVPDWWTQL*LKEGCQAAQTE Trigger: CTCAGTCTGAGCCGCCTGACAACCCTCCTTCAGCCAGAGCTGTGTCCACCAGTCCGGAACATAAGTCACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR TCA 72 bp | AGGGACTCCTATGGAAGAGTTAGGGGAAGGACTGAATaGGCTGAAGGGGATAGCAACCTCATACGAAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: RDSYGRVRGRTE*AEGDSNLIRRP Trigger: TGGTCTTCGTATGAGGTTGCTATCCCCTTCAGCTCATTCAGTCCTTCCCCTAACTCTTCCATAGGAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CCA 72 bp | AATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTaGACACAGCTCTGGCTGAAGGAGGGTTGTCAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: NDENVVTYVPDW*TQLWLKEGCQA Trigger: CGCCTGACAACCCTCCTTCAGCCAGAGCTGTGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR TCA 72 bp | AGAAGACTTCCTCTAGTTTATAGGGGTGACCCTAGCTaGGACTTCAAGCAGCGGCAAATGGGCAAATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRLPLVYRGDPS*DFKQRQMGKCR Trigger: TCTGCATTTGCCCATTTGCCGCTGCTTGAAGTCTCAGCTAGGGTCACCCCTATAAACTAGAGGAAGTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR GCA 72 bp | ATATTTCCATTCATTCTCCTAGCCCTCTGGGCTTCTTaGTTGTCTTCTCCCATACCTGATTCTGCCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IFPFILLALWAS*LSSPIPDSAPF Trigger: GAAGGGGGCAGAATCAGGTATGGGAGAAGACAAGCAAGAAGCCCAGAGGGCTAGGAGAATGAATGGAAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CCA 72 bp | AGACACTCAGGGTTTGAGAATGTAAGCCTCCACTTCTaGCTCAGGGGATTGCGGAGCAGGATAAACAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: RHSGFENVSLHF*LRGLRSRINKM Trigger: CATTTTGTTTATCCTGCTCCGCAATCCCCTGAGCCAGAAGTGGAGGCTTACATTCTCAAACCCTGAGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTATCAGGGAATTCCTACACCTGATAAACACTTTCTGCAAAGTAGCTGGATACTTGGAAACCCAGCAGTaGCCTTCTGCAGGGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SIREFLHLINTFCKVAGYLETQQ*PSAGMG Trigger: CCCCATCCCTGCAGAAGGCAACTGCTGGGTTTCCAA...GTATCCAGCTACTTTGCAGAAAGTGTTTATCAGGTGTAGGAATTCCCTGATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR GCA 72 bp | TGTCTCACTCCCCAATCCAGAACTCTGTTATTTAGATaGTATAAGGGAAGCCAGGCACCACTGGTCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CLTPQSRTLLFR*YKGSQAPLVSQ Trigger: TTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTCTGGATTGGGGAGTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR GCA 72 bp | GAAGGACAGGTCACTCAATTTAACAACATATCACTATaGCCAAAGATCAGGGCCTTGTTCAACCCTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EGQVTQFNNISL*PKIRALFNPPV Trigger: GACAGGAGGGTTGAACAAGGCCCTGATCTTTGGGCATAGTGATATGTTGTTAAATTGAGTGACCTGTCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CCA 72 bp | TGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTaGTCAGTCAAGAACTCTTCACCTTCCATACTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CYLDAIREARHH*SVKNSSPSILR Trigger: TCTTAGTATGGAAGGTGAAGAGTTCTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTATATCCCCCTCGTAAATTAGAACAGTCAATAAAAGTCACCAACATGTTCTTCACCCCCAACTCCTaGAAGTTGCATATTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: RLYPPRKLEQSIKVTNMFFTPNS*KLHISI Trigger: AATGGAAATATGCAACTTCAAGGAGTTGGGGGTGAA...GAACATGTTGGTGACTTTTATTGACTGTTCTAATTTACGAGGGGGATATAGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR GCA 72 bp | CTACTTAATCATCTCAATAGATGCAGAAAACGCCTTTaGCAAAATCCAACCTTCCTTCACGATAAAGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLNHLNRCRKRL*QNPTFLHDKGP Trigger: AGGACCTTTATCGTGAAGGAAGGTTGGATTTTGGCAAAGGCGTTTTCTGCATCTATTGAGATGATTAAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR-3UTR CAA 90 bp | AACATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCCAGTGTCAATTAACCTaGACATGGTTAATGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NIKLNGNVEQFHLNQGQGQCQLT*TWLMKP Trigger: AGGCTTCATTAACCATGTCAAGGTTAATTGACACTG...GCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CCA 72 bp | CAAAAACAGCAAGCCAATAGCCAACATCAAATTGAATaGAAACGTAGAGCAATTCCACTTAAATCAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QKQQANSQHQIE*KRRAIPLKSGT Trigger: TGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATGTTGGCTATTGGCTTGCTGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR GCA 72 bp | TCTATCAGGGAATTCCTACACCTGATAAACACTTTCTaGAAAGTAGCTGGATACAAAATTAACTCACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SIREFLHLINTF*KVAGYKINSQK Trigger: TTTTTGTGAGTTAATTTTGTATCCAGCTACTTTGCAGAAAGTGTTTATCAGGTGTAGGAATTCCCTGATAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | GAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGACTCCCAGGATGACTTaGCGGGAGTGGGCCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELCYLDAIREARHHWSVKTPRMT*REWAPS Trigger: GGAAGGGGCCCACTCCCGCCAAGTCATCCTGGGAGT...CTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129751.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGCCAGGCACCACTGGTCAGTCAAGAACTCTTCACCTTCCATACTAAGAACCTTCTGGTTTGTAGGTaGCAAAGCCCAGCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQAPLVSQELFTFHTKNLLVCR*QSPAQG Trigger: TCCCTGCGCTGGGCTTTGGCACCTACAAACCAGAAG...GTTCTTAGTATGGAAGGTGAAGAGTTCTTGACTGACCAGTGGTGCCTGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | GAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGATGACTTGGCGGGAGTaGGCCCCTTCCCCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELCYLDAIREARHHWSVKMTWRE*APSPAS Trigger: TGAAGCAGGGGAAGGGGCCCACTCCCGCCAAGTCAT...CTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129751.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGACCCTAGCTGAGACTTCAAGCAGCGGCAAATGGGCAAATGCAGAGAGTAGATGGCATTCCACCTaGTTGCAAACAGGCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GVTLAETSSSGKWANAESRWHST*LQTGLY Trigger: ATACAAGCCTGTTTGCAACCAGGTGGAATGCCATCT...ACTCTCTGCATTTGCCCATTTGCCGCTGCTTGAAGTCTCAGCTAGGGTCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CAA 72 bp | TTTCCATTCATTCTCCTAGCCCTCTGGGCTTCTTGCTaGTCTTCTCCCATACCTGATTCTGCCCCCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPFILLALWASC*SSPIPDSAPFP Trigger: AGGGAAGGGGGCAGAATCAGGTATGGGAGAAGACAAGCAAGAAGCCCAGAGGGCTAGGAGAATGAATGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGAACCCTTACACTTCTCCATaGCCTCCCATGTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: LCYLDAIREARHHWSVKNPYTSP*PPMWHI Trigger: TATGTGCCACATGGGAGGCCATGGAGAAGTGTAAGG...GTTCTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR TCA 90 bp | TGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGAACTCTAAGGGATATTCTGGGTaGCCCTCTCCAAATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CYLDAIREARHHWSVKNSKGYSG*PSPNGA Trigger: TGCTCCATTTGGAGAGGGTCACCCAGAATATCCCTT...AGAGTTCTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| 3UTR CAA 72 bp | TTTAACAACATATCACTATGCCCAAAGATCAGGGCCTaGTTCAACCCTCCTGTCACCTCTTTGGCCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: FNNISLCPKIRA*FNPPVTSLAPY Trigger: GTATGGGGCCAAAGAGGTGACAGGAGGGTTGAACAAGGCCCTGATCTTTGGGCATAGTGATATGTTGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CAA 72 bp | TTCTACATTTGGGCATTTCAGCTAAGGTCATACCCATaGAGTCCTGGAAGCCTCTCACACCCCAGTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FYIWAFQLRSYP*SPGSLSHPSYL Trigger: CAGATAACTGGGGTGTGAGAGGCTTCCAGGACTCAATGGGTATGACCTTAGCTGAAATGCCCAAATGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACACTTCTGGTTTGTAGGTaGCAAAGCCCAGCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTLLVCR*QSPAQG Trigger: TCCCTGCGCTGGGCTTTGGCACCTACAAACCAGAAG...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | TCTATCAGGGAATTCCTACACCTGATAAACACTTTCTGCAAAGTAGCTGGATACAGAGCGAACCAGCTCTaGCCTATGGAAAGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SIREFLHLINTFCKVAGYRANQL*PMESAP Trigger: TGGTGCACTTTCCATAGGCCAGAGCTGGTTCGCTCT...GTATCCAGCTACTTTGCAGAAAGTGTTTATCAGGTGTAGGAATTCCCTGATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR GCA 90 bp | TGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGAACTCTTTTCACAAGGCCAGCTaGAATCTTGCTTCGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYLDAIREARHHWSVKNSFHKAS*NLASNS Trigger: GCTATTCGAAGCAAGATTGCAGCTGGCCTTGTGAAA...AGAGTTCTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGAACCAATGTCCTTTGACTTaGAGTAGTTCAACAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCYLDAIREARHHWSVKNQCPLT*SSSTAS Trigger: GGAAGCTGTTGAACTACTGCAAGTCAAAGGACATTG...GTTCTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR GCA 90 bp | ACTCCCCAATCCAGAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCATCAAATTCAAATACCTaGAACTGGACTCCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPQSRTLLFRCYKGSQAPSNSNT*NWTPRM Trigger: CATCCTGGGAGTCCAGTTGCAGGTATTTGAATTTGA...TGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTCTGGATTGGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129751.2 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAAGAGCGAACCAGCTCTaGCCTATGGAAAGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTRANQL*PMESAP Trigger: TGGTGCACTTTCCATAGGCCAGAGCTGGTTCGCTCT...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAGAGAACTGGAGAGCTTaGGTCTACCCATCGCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTENWRA*VYPSLR Trigger: CCTAAGCGATGGGTAGACCCAAGCTCTCCAGTTCTC...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAAAGGGATATTCTGGGTaGCCCTCTCCAAATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTKGYSG*PSPNGA Trigger: TGCTCCATTTGGAGAGGGTCACCCAGAATATCCCTT...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGGCTTTTTCCTAGTGATGTGGTGATGCTTCAACATGCAAATATCGACATAAAGGGATATTCTGGGTaGCCCTCTCCAAATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPSDVVMLQHANIDIKGYSG*PSPNGA Trigger: TGCTCCATTTGGAGAGGGTCACCCAGAATATCCCTT...TATGTCGATATTTGCATGTTGAAGCATCACCACATCACTAGGAAAAAGCCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | TCTATCAGGGAATTCCTACACCTGATAAACACTTTCTGCAAAGTAGCTGGATACTCCATGCTCATCTTCTaGAAACAGATCTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIREFLHLINTFCKVAGYSMLIF*KQIFPW Trigger: CCAGGGGAAGATCTGTTTCCAGAAGATGAGCATGGA...GTATCCAGCTACTTTGCAGAAAGTGTTTATCAGGTGTAGGAATTCCCTGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACACCTTACACTTCTCCATaGCCTCCCATGTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTPYTSP*PPMWHI Trigger: TATGTGCCACATGGGAGGCCATGGAGAAGTGTAAGG...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGTAATGTCTCACTCCCCAATCCAGAACTCTGTTATTTAGATGCTATAGAGAACTGGAGAGCTTaGGTCTACCCATCGCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFSNVSLPNPELCYLDAIENWRA*VYPSLR Trigger: CCTAAGCGATGGGTAGACCCAAGCTCTCCAGTTCTC...TATAGCATCTAAATAACAGAGTTCTGGATTGGGGAGTGAGACATTACTGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| 3UTR CAA 72 bp | TTATCTGGGACTTTTGAAAGGTTCACCCCCAACTCCTaGAAGTTGCATATTTCCATTCATTCTCCTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGTFERFTPNS*KLHISIHSPSP Trigger: AGGGCTAGGAGAATGAATGGAAATATGCAACTTCAAGGAGTTGGGGGTGAACCTTTCAAAAGTCCCAGATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR TCA 90 bp | ACTCCCCAATCCAGAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCAGATTTTCATATCCTCTaGAGGCAGCTCAAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPQSRTLLFRCYKGSQAPDFHIL*RQLKFK Trigger: TTTGAATTTGAGCTGCCTTCAGAGGATATGAAAATC...TGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTCTGGATTGGGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTACATTTGGGCATTTCAGCTAAGGTCATACCCATTGAGTCCTGGAAGTTCATTAACCTCTTCTaGTTTGTAGGTGCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHLGISAKVIPIESWKFINLF*FVGAKA Trigger: GGCTTTGGCACCTACAAACCAGAAGAGGTTAATGAA...CTTCCAGGACTCAATGGGTATGACCTTAGCTGAAATGCCCAAATGTAGAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACATCCATGCTCATCTTCTaGAAACAGATCTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTSMLIF*KQIFPW Trigger: CCAGGGGAAGATCTGTTTCCAGAAGATGAGCATGGA...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACATCAAATACCTGCAACTaGACTCCCAGGATGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTSNTCN*TPRMTW Trigger: CCAAGTCATCCTGGGAGTCCAGTTGCAGGTATTTGA...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129751.2 |
||
| 3UTR CAA 72 bp | AAGTCAGAGACATGGTTGATTTCACCAGCTGGCGGTTaGAGCTTGAGTAAGACATTTATAAAAACCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KSETWLISPAGG*SLSKTFIKTQT Trigger: TGTCTGGGTTTTTATAAATGTCTTACTCAAGCTCAAACCGCCAGCTGGTGAAATCAACCATGTCTCTGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACATTTCACAAGGCCAGCTaGAATCTTGCTTCGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTFHKAS*NLASNS Trigger: GCTATTCGAAGCAAGATTGCAGCTGGCCTTGTGAAA...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAAAACAGATCTTCCCCTaGCTTCATTTGCACGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTKQIFP*LHLHGI Trigger: TATCCCGTGCAAATGAAGCCAGGGGAAGATCTGTTT...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAAGATGGCATTCCACCTaGTTGCAAACAGGCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTRWHST*LQTGLY Trigger: ATACAAGCCTGTTTGCAACCAGGTGGAATGCCATCT...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAATAGCCTGCCCTACATaGTTTTCAGTTTGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTIACPT*FSVWYT Trigger: TGTGTACCAAACTGAAAATCATGTAGGGCAGGCTAT...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR TCA 90 bp | AACATCAAATTGAATGGAAACGTAGAGCAATTCCACTTAAATCAGGGACAAGGCATAGCCTGCCCTACATaGTTTTCAGTTTGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: NIKLNGNVEQFHLNQGQGIACPT*FSVWYT Trigger: TGTGTACCAAACTGAAAATCATGTAGGGCAGGCTAT...GCCTTGTCCCTGATTTAAGTGGAATTGCTCTACGTTTCCATTCAATTTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACACAATGTCCTTTGACTTaGAGTAGTTCAACAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTQCPLT*SSSTAS Trigger: GGAAGCTGTTGAACTACTGCAAGTCAAAGGACATTG...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACATTCATTAACCTCTTCTaGTTTGTAGGTGCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTFINLF*FVGAKA Trigger: GGCTTTGGCACCTACAAACCAGAAGAGGTTAATGAA...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| 3UTR CAA 72 bp | TCACTGAGAGCCCTGTCTGTTTACTGGATAGACATTTaGTTTCTACATTTGGGCATTTCAGCTAAGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLRALSVYWIDI*FLHLGISAKVI Trigger: TATGACCTTAGCTGAAATGCCCAAATGTAGAAACAAAATGTCTATCCAGTAAACAGACAGGGCTCTCAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR TCA 90 bp | TCTATCAGGGAATTCCTACACCTGATAAACACTTTCTGCAAAGTAGCTGGATACGATTTTCATATCCTCTaGAGGCAGCTCAAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIREFLHLINTFCKVAGYDFHIL*RQLKFK Trigger: TTTGAATTTGAGCTGCCTTCAGAGGATATGAAAATC...GTATCCAGCTACTTTGCAGAAAGTGTTTATCAGGTGTAGGAATTCCCTGATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR GCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAAGAATTTTCTCCAGCTaGCTGCTATTAAAGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTRIFSS*LLLKLD Trigger: GTCCAACTTTAATAGCAGGCAGCTGGAGAAAATTCT...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR TCA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACAGATTTTCATATCCTCTaGAGGCAGCTCAAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TMSKNDENVVTYVPDWWTDFHIL*RQLKFK Trigger: TTTGAATTTGAGCTGCCTTCAGAGGATATGAAAATC...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 ENSMUST00000129751.2 |
||
| CDS-3UTR CAA 90 bp | GAACTCTGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGGACTCCCAGGATGACTaGGCGGGAGTGGGCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELCYLDAIREARHHWSVKDSQDD*AGVGPF Trigger: GAAGGGGCCCACTCCCGCCAAGTCATCCTGGGAGTC...CTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACAGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129751.2 |
||
| CDS-3UTR CAA 90 bp | TGTTATTTAGATGCTATAAGGGAAGCCAGGCACCACTGGTCAGTCAAGAACTCTTGCCTGCTATTAAAGTaGGACACACCAATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYLDAIREARHHWSVKNSCLLLK*DTPMDL Trigger: CAAGTCCATTGGTGTGTCCAACTTTAATAGCAGGCA...AGAGTTCTTGACTGACCAGTGGTGCCTGGCTTCCCTTATAGCATCTAAATAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CAA 90 bp | GGGACAAGGCAAGGCTACCTACTCCCTGTCTACTCAATACAGTGTGAAGTTCTACCATGTCACAAAGAATaGGATCATTCAAGAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GTRQGYLLPVYSIQCEVLPCHKE*DHSREL Trigger: CAGTTCTCTTGAATGATCCAATTCTTTGTGACATGG...TAGAACTTCACACTGTATTGAGTAGACAGGGAGTAGGTAGCCTTGCCTTGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118663.9 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACATGCCTGCTATTAAAGTaGGACACACCAATGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TMSKNDENVVTYVPDWWTCLLLK*DTPMDL Trigger: CAAGTCCATTGGTGTGTCCAACTTTAATAGCAGGCA...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS-3UTR CAA 90 bp | ACAATGTCAAAGAATGATGAAAATGTAGTGACTTATGTTCCGGACTGGTGGACACCATGTCACAAAGAATaGGATCATTCAAGAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: TMSKNDENVVTYVPDWWTPCHKE*DHSREL Trigger: CAGTTCTCTTGAATGATCCAATTCTTTGTGACATGG...TGTCCACCAGTCCGGAACATAAGTCACTACATTTTCATCATTCTTTGACATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS CCA 72 bp | TCCTCTGAAGGCAGCTCAAATTCAAATACCTGCAACTaGACTCCCAGGATGACTTGGCGGGAGTGGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSEGSSNSNTCN*TPRMTWREWAP Trigger: AGGGGCCCACTCCCGCCAAGTCATCCTGGGAGTCCAGTTGCAGGTATTTGAATTTGAGCTGCCTTCAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129751.2 |
||
| CDS CCA 72 bp | GATAGCCTCCAGTGGCTTATTTTCATTAACCTCTTCTaGTTTGTAGGTGCCAAAGCCCAGCGCAGGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: DSLQWLIFINLF*FVGAKAQRRDE Trigger: TTCATCCCTGCGCTGGGCTTTGGCACCTACAAACCAGAAGAGGTTAATGAAAATAAGCCACTGGAGGCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS CCA 72 bp | GATTTCTCCAAGTTAGAGCGAACCAGCTCTGGCCTATaGAAAGTGCACCAAAGCTTTGTAGTGAGGAATATG | + |
|
Preference number: 6 (lower is better) Translates to: DFSKLERTSSGL*KVHQSFVVRNM Trigger: CATATTCCTCACTACAAAGCTTTGGTGCACTTTCCATAGGCCAGAGCTGGTTCGCTCTAACTTGGAGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||
| CDS CCA 72 bp | TTTTCCATGCTCATCTTCTGGAAACAGATCTTCCCCTaGCTTCATTTGCACGGGATAATGTATAAGATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSMLIFWKQIFP*LHLHGIMYKIE Trigger: CTCTATCTTATACATTATCCCGTGCAAATGAAGCCAGGGGAAGATCTGTTTCCAGAAGATGAGCATGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081326.7 ENSMUST00000118663.9 |
||