Pregenerated sensors for AKR1C18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021214Ensembl transcript IDs: ENSMUST00000021635.9, ENSMUST00000110704.9
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTCATGGCACAAAGAACTaGATCATCCAAGAGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: GGELLSSDWRRCVELLASHGTKN*IIQENW Trigger: CCAGTTCTCTTGGATGATCCAGTTCTTTGTGCCATG...AGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | TTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGCCTTACACTTCTCCATaGCCTTCAGAGACACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LTGGELLSSDWRRCVELLPYTSP*PSETLG Trigger: TCCCAGTGTCTCTGAAGGCCATGGAGAAGTGTAAGG...CAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110704.9 |
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| CDS-3UTR GCA 90 bp | ATTGAATTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGCCGCTTGTACTTCTTTaGCATGGCACAAAGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: IELTGGELLSSDWRRCVEPLVLL*HGTKNW Trigger: CCAGTTCTTTGTGCCATGGCAAAGAAGTACAAGCGG...CTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAATTCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | GGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTTTGCTTAGAATGGCCTaGCCTATCTCTTCTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: GGELLSSDWRRCVELLASLLRMA*PISSSF Trigger: GAATGAAGAAGAGATAGGCCAGGCCATTCTAAGCAA...AGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | GGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTCAATCTTGCTTAGAATaGCCTGGCCTATCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGELLSSDWRRCVELLASQSCLE*PGLSLL Trigger: AAGAAGAGATAGGCCAGGCCATTCTAAGCAAGATTG...AGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | TTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGCAAAAGCTCATTCCCTaGCTTCAGAGACACTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LTGGELLSSDWRRCVELLQKLIP*LQRHWE Trigger: TTCCCAGTGTCTCTGAAGCCAGGGAATGAGCTTTTG...CAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021635.9 |
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| CDS-3UTR CCA 90 bp | GAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTGAGAGTAGATGGCATTCTACCTaGTTGCACACAGGCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ELLSSDWRRCVELLASESRWHST*LHTGLY Trigger: GTACAAGCCTGTGTGCAACCAGGTAGAATGCCATCT...ACTCTCAGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | TTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGAGATGGCATTCTACCTaGTTGCACACAGGCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LTGGELLSSDWRRCVELLRWHST*LHTGLY Trigger: GTACAAGCCTGTGTGCAACCAGGTAGAATGCCATCT...CAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | GAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTGAGAGTCATGGCACAAAGAACTaGATCATCCAAGAGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: ELLSSDWRRCVELLASESHGTKN*IIQENW Trigger: CCAGTTCTCTTGGATGATCCAGTTCTTTGTGCCATG...ACTCTCAGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | GGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTTCATCTGAAGCCAATTaGAAATCAAAGACCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: GGELLSSDWRRCVELLASSSEAN*KSKTCM Trigger: CATGCAGGTCTTTGATTTCCAATTGGCTTCAGATGA...AGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | GAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTGAGAGTTTGCTTAGAATGGCCTaGCCTATCTCTTCTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: ELLSSDWRRCVELLASESLLRMA*PISSSF Trigger: GAATGAAGAAGAGATAGGCCAGGCCATTCTAAGCAA...ACTCTCAGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | GAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTGAGAGTCAATCTTGCTTAGAATaGCCTGGCCTATCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ELLSSDWRRCVELLASESQSCLE*PGLSLL Trigger: AAGAAGAGATAGGCCAGGCCATTCTAAGCAAGATTG...ACTCTCAGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR GCA 90 bp | GAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTGAGAGTTGGAAATCAAAGACCTaGATGTTCTCTCTGATTCTC | + |
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Preference number: 4 (lower is better) Translates to: ELLSSDWRRCVELLASESWKSKT*MFSLIL Trigger: GAGAATCAGAGAGAACATGCAGGTCTTTGATTTCCA...ACTCTCAGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR GCA 90 bp | TTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGTGGAAATCAAAGACCTaGATGTTCTCTCTGATTCTC | + |
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Preference number: 4 (lower is better) Translates to: LTGGELLSSDWRRCVELLWKSKT*MFSLIL Trigger: GAGAATCAGAGAGAACATGCAGGTCTTTGATTTCCA...CAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CCA 90 bp | GAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTGAGAGTTCATCTGAAGCCAATTaGAAATCAAAGACCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: ELLSSDWRRCVELLASESSSEAN*KSKTCM Trigger: CATGCAGGTCTTTGATTTCCAATTGGCTTCAGATGA...ACTCTCAGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| 3UTR CAA 72 bp | AAAGAAGCAAAATTTATTGAATTAACTGGGGGTGAGTaGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: KEAKFIELTGGE*LSSDWRRCVEL Trigger: TAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAATTCAATAAATTTTGCTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CAA 90 bp | ATTGAATTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGAGGGCTGGAGTCCGCTaGTACTTCTTTGCCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: IELTGGELLSSDWRRCVERAGVR*YFFAMA Trigger: TGCCATGGCAAAGAAGTACAAGCGGACTCCAGCCCT...CTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAATTCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CAA 90 bp | GGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTTCCTCATTGAAACTCTaGGCTAGGGCCACAATCCCA | + |
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Preference number: 5 (lower is better) Translates to: GGELLSSDWRRCVELLASSSLKL*ARATIP Trigger: TGGGATTGTGGCCCTAGCCAAGAGTTTCAATGAGGA...AGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CAA 90 bp | GGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTCTGATTCTCTCCTCATaGAAACTCTTGGCTAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GGELLSSDWRRCVELLASLILSS*KLLARA Trigger: GGCCCTAGCCAAGAGTTTCAATGAGGAGAGAATCAG...AGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CAA 90 bp | ATTGAATTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTCCTCATTGAAACTCTaGGCTAGGGCCACAATCCCA | + |
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Preference number: 5 (lower is better) Translates to: IELTGGELLSSDWRRCVESSLKL*ARATIP Trigger: TGGGATTGTGGCCCTAGCCAAGAGTTTCAATGAGGA...CTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAATTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CAA 90 bp | ATTGAATTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGCTGATTCTCTCCTCATaGAAACTCTTGGCTAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: IELTGGELLSSDWRRCVELILSS*KLLARA Trigger: GGCCCTAGCCAAGAGTTTCAATGAGGAGAGAATCAG...CTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAATTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CAA 90 bp | TTAACTGGGGGTGAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGTCCGCTTGTACTTCTTaGCCATGGCACAAAGAACTG | + |
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Preference number: 5 (lower is better) Translates to: LTGGELLSSDWRRCVELLSACTS*PWHKEL Trigger: CAGTTCTTTGTGCCATGGCAAAGAAGTACAAGCGGA...CAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTCACCCCCAGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS-3UTR CAA 90 bp | GAGTTGCTAAGCAGTGATTGGAGGCGGTGTGTCGAGTTATTGGCATCTGAGAGTTCCGCTTGTACTTCTTaGCCATGGCACAAAGAACTG | + |
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Preference number: 5 (lower is better) Translates to: ELLSSDWRRCVELLASESSACTS*PWHKEL Trigger: CAGTTCTTTGTGCCATGGCAAAGAAGTACAAGCGGA...ACTCTCAGATGCCAATAACTCGACACACCGCCTCCAATCACTGCTTAGCAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS CCA 90 bp | CAGGGCTGGAGTCCGCTTGTACTTCTTTGCCATGGCACAAAGAACTaGATCATCCAAGAGAACTGGGGTATCCTCATTTATACAGTATTT | + |
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Preference number: 5 (lower is better) Translates to: QGWSPLVLLCHGTKN*IIQENWGILIYTVF Trigger: AAATACTGTATAAATGAGGATACCCCAGTTCTCTTGGATGATCCAGTTCTTTGTGCCATGGCAAAGAAGTACAAGCGGACTCCAGCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS CCA 72 bp | AGTCCGCTTGTACTTCTTTGCCATGGCACAAAGAACTaGATCATCCAAGAGAACTGGGGTATCCTCATTTAT | + |
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Preference number: 6 (lower is better) Translates to: SPLVLLCHGTKN*IIQENWGILIY Trigger: ATAAATGAGGATACCCCAGTTCTCTTGGATGATCCAGTTCTTTGTGCCATGGCAAAGAAGTACAAGCGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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| CDS CAA 72 bp | AATATATCTTCCCTTTTCACAGTGCCATCTTCAATCTaGCTTAGAATGGCCTGGCCTATCTCTTCTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: NISSLFTVPSSI*LRMAWPISSSF Trigger: GAATGAAGAAGAGATAGGCCAGGCCATTCTAAGCAAGATTGAAGATGGCACTGTGAAAAGGGAAGATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021635.9 ENSMUST00000110704.9 |
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