Pregenerated sensors for AKR1C14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033715Ensembl transcript IDs: ENSMUST00000041768.7, ENSMUST00000118717.10, ENSMUST00000147180.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGGCACTTGCTGCTCTAACAGAAGACTTAGGTTTGGCTCCCAGTaGCCACATGGTGATTCACAATCATCCGTAGCTCCAGTTCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: NGTCCSNRRLRFGSQ*PHGDSQSSVAPVPS Trigger: ACTTGGAACTGGAGCTACGGATGATTGTGAATCACCATGTGGGCACTGGGAGCCAAACCTAAGTCTTCTGTTAGAGCAGCAAGTGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR GCA 90 bp | GGGTTGCTGGAGAGAACCCTGAGTCTCTTGGTCACTCCTCACATGTaGCTTACCTCCAAAATAAGAAAAAGCGAAGAGCTATGGAGTATT | + |
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Preference number: 1 (lower is better) Translates to: GLLERTLSLLVTPHM*LTSKIRKSEELWSI Trigger: AATACTCCATAGCTCTTCGCTTTTTCTTATTTTGGAGGTAAGGCACATGTGAGGAGTGACCAAGAGACTCAGGGTTCTCTCCAGCAACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR TCA 90 bp | AAGGGATGTGTTCAGTCACCAGTATCCAAGATATCTCTCATATCATaGTGCATCAGCAGATCTTCTGATAGAAATGCTGGCAAAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: KGCVQSPVSKISLIS*CISRSSDRNAGKGH Trigger: GTGGCCTTTGCCAGCATTTCTATCAGAAGATCTGCTGATGCATCATGATATGAGAGATATCTTGGATACTGGTGACTGAACACATCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR CCA 90 bp | AACGAATGGCAATCAGTGCTGGTGTTTGCTTGTACTTATTTGCCATaGCACAAAGAACTGGATCATCTAAGAGAACTGGACTTTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: NEWQSVLVFACTYLP*HKELDHLRELDFSG Trigger: ACCAGAAAAGTCCAGTTCTCTTAGATGATCCAGTTCTTTGTGCCATGGCAAATAAGTACAAGCAAACACCAGCACTGATTGCCATTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCCAGTGCCCACATGGTaGTTCACAATCATCCGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SLLTNLPNFPQGEHTPQAPVPTW*FTIIRS Trigger: GCTACGGATGATTGTGAATCACCATGTGGGCACTGG...AGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTCCCTCATAGCTCTTTaGACTTTGCTCCATCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LFLPTSQISHKENILPRLSLIAL*TLLHLT Trigger: AGTCAGATGGAGCAAAGTCCAAAGAGCTATGAGGGA...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGGACCTAATGAGATGGCTCGGCATTTAATGGCACTTGCTGCTCTAACATCCCTCATAGCTCTTTaGACTTTGCTCCATCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: RVGPNEMARHLMALAALTSLIAL*TLLHLT Trigger: AGTCAGATGGAGCAAAGTCCAAAGAGCTATGAGGGA...TGTTAGAGCAGCAAGTGCCATTAAATGCCGAGCCATCTCATTAGGTCCCACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCATAGGAAAAGCAACGTaGTGTTCCATTTCAGCGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LFLPTSQISHKENILPRLIGKAT*CSISAC Trigger: ACACGCTGAAATGGAACACCACGTTGCTTTTCCTAT...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | GATACTTCCCAAGCAGAGACATATTCAGCTTTCTTCTCAACTTCCCTACATCTGTGGAGCTCTGGTTCTTaGGTTGCTGGAGAGAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: DTSQAETYSAFFSTSLHLWSSGS*VAGENP Trigger: AGGGTTCTCTCCAGCAACCCAAGAACCAGAGCTCCA...CAGATGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGGAAGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR TCA 90 bp | TTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGGAGGAGATGCCTTTGCAATaGTTATCCTCAACAATGACT | + |
|
Preference number: 2 (lower is better) Translates to: LPTSQISHKENILPRLLEEMPLQ*LSSTMT Trigger: AGTCATTGTTGAGGATAATCATTGCAAAGGCATCTC...CTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTGTCACTCCTCACATGTaGCTTACCTCCAAAATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLLTNLPNFPQGEHTPQAVTPHM*LTSKIR Trigger: TCTTATTTTGGAGGTAAGGCACATGTGAGGAGTGAC...AGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCAAGAATCTTTAGAGTaGGACCTAATGAGATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SLLTNLPNFPQGEHTPQAQESLE*DLMRWL Trigger: GAGCCATCTCATTAGGTCCCACTCTAAAGATTCTTG...AGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | GGATCATCTAAGAGAACTGGACTTTTCTGGTCCACCCAGATTTTGTCTCGTGAAAGATGGCATTCTACCTaGTTGCACACAGGCTTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: GSSKRTGLFWSTQILSRERWHST*LHTGLY Trigger: GTACAAGCCTGTGTGCAACCAGGTAGAATGCCATCT...TTCACGAGACAAAATCTGGGTGGACCAGAAAAGTCCAGTTCTCTTAGATGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTCTAGCAAAACAGGTTaGTGTCAGAAATCAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LFLPTSQISHKENILPRLSSKTG*CQKSEE Trigger: TTCTTCTGATTTCTGACACCAACCTGTTTTGCTAGA...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | TTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGGAGTCTAGCAAAACAGGTTaGTGTCAGAAATCAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LPTSQISHKENILPRLLESSKTG*CQKSEE Trigger: TTCTTCTGATTTCTGACACCAACCTGTTTTGCTAGA...CTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCAAAAGCGAAGAGCTATaGAGTATTTTCTTCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LFLPTSQISHKENILPRLKSEEL*SIFFFL Trigger: GAGGAAGAAGAAAATACTCCATAGCTCTTCGCTTTT...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | TATGCCTTTAATCTGAGCATTCTAGAGACAGAAATTTCTAGTTGGGTCTCTGTGAGGCTCTTGGAGCTCTaGTTCTTGGGTTGCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YAFNLSILETEISSWVSVRLLEL*FLGCWR Trigger: TCTCCAGCAACCCAAGAACCAGAGCTCCAAGAGCCT...CACAGAGACCCAACTAGAAATTTCTGTCTCTAGAATGCTCAGATTAAAGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | AATCTGAGCATTCTAGAGACAGAAATTTCTAGTTGGGTCTCTGTGAGTACTATATACTCCCCAGGCTCTTaGAGCTCTGGTTCTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: NLSILETEISSWVSVSTIYSPGS*SSGSWV Trigger: AACCCAAGAACCAGAGCTCCAAGAGCCTGGGGAGTA...TATAGTACTCACAGAGACCCAACTAGAAATTTCTGTCTCTAGAATGCTCAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118717.10 |
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| 3UTR-3UTR TCA 90 bp | GATACTTCCCAAGCAGAGACATATTCAGCTTTCTTCTCAACTTCCCTACATCTGTTCCATTTCAGCGTGTaGCAAAAATATGGCTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: DTSQAETYSAFFSTSLHLFHFSV*QKYGFP Trigger: AGGGAAGCCATATTTTTGTCACACGCTGAAATGGAA...CAGATGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGGAAGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR CAA 90 bp | ATTGGTAACGAATGGCAATCAGTGCTGGTGTTTGCTTGTACTTATTaGCCATGGCACAAAGAACTGGATCATCTAAGAGAACTGGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: IGNEWQSVLVFACTY*PWHKELDHLRELDF Trigger: AAAGTCCAGTTCTCTTAGATGATCCAGTTCTTTGTGCCATGGCAAATAAGTACAAGCAAACACCAGCACTGATTGCCATTCGTTACCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR-3UTR TCA 90 bp | GATACTTCCCAAGCAGAGACATATTCAGCTTTCTTCTCAACTTCCCTACATCTGGAGATGCCTTTGCAATaGTTATCCTCAACAATGACT | + |
|
Preference number: 2 (lower is better) Translates to: DTSQAETYSAFFSTSLHLEMPLQ*LSSTMT Trigger: AGTCATTGTTGAGGATAATCATTGCAAAGGCATCTC...CAGATGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGGAAGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR TCA 90 bp | ACAATTAATTCCCTTAATGTTGAAAAATCCTTCAAATTCCCACCCAGAGATGCCTTCCATTTCAGCGTGTaGCAAAAATATGGCTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TINSLNVEKSFKFPPRDAFHFSV*QKYGFP Trigger: AGGGAAGCCATATTTTTGTCACACGCTGAAATGGAA...GGCATCTCTGGGTGGGAATTTGAAGGATTTTTCAACATTAAGGGAATTAATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | ACAATTAATTCCCTTAATGTTGAAAAATCCTTCAAATTCCCACCCAGAGATGCCCAAGAATCTTTAGAGTaGGACCTAATGAGATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TINSLNVEKSFKFPPRDAQESLE*DLMRWL Trigger: GAGCCATCTCATTAGGTCCCACTCTAAAGATTCTTG...GGCATCTCTGGGTGGGAATTTGAAGGATTTTTCAACATTAAGGGAATTAATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR GCA 90 bp | CAAAATAACTCGCAGTATTGTATCTTAAATTTCTGTGCAAGCCATCCAGGACTTTTGCTTGTACTTATTTaGCATGGCACAAAGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: QNNSQYCILNFCASHPGLLLVLI*HGTKNW Trigger: CCAGTTCTTTGTGCCATGGCAAATAAGTACAAGCAA...AAGTCCTGGATGGCTTGCACAGAAATTTAAGATACAATACTGCGAGTTATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAATAACTCGCAGTATTGTATCTTAAATTTCTGTGCAAGCCATCCAGGACTTCAGAATGATGTCTTTTaGCTTACAATAGTCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: QNNSQYCILNFCASHPGLQNDVF*LTIVQH Trigger: ATGCTGGACTATTGTAAGTCAAAAGACATCATTCTG...AAGTCCTGGATGGCTTGCACAGAAATTTAAGATACAATACTGCGAGTTATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR-3UTR GCA 90 bp | TATGCCTTTAATCTGAGCATTCTAGAGACAGAAATTTCTAGTTGGGTCTCTGTGTCAACAATGACTTCATaGCCAAAACTTCTAGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: YAFNLSILETEISSWVSVSTMTS*PKLLAK Trigger: TTTTGCTAGAAGTTTTGGGCATGAAGTCATTGTTGA...CACAGAGACCCAACTAGAAATTTCTGTCTCTAGAATGCTCAGATTAAAGGCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118717.10 |
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| 3UTR-3UTR CCA 90 bp | GATTGGGATGGTCATCAAAATAACTCGCAGTATTGTATCTTAAATTTCTGTGCAGTAATTGGTAACGAATaGCAATCAGTGCTGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: DWDGHQNNSQYCILNFCAVIGNE*QSVLVF Trigger: AAACACCAGCACTGATTGCCATTCGTTACCAATTAC...TGCACAGAAATTTAAGATACAATACTGCGAGTTATTTTGATGACCATCCCAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR-3UTR CCA 90 bp | GATTGGGATGGTCATCAAAATAACTCGCAGTATTGTATCTTAAATTTCTGTGCATGTACTTATTTGCCATaGCACAAAGAACTGGATCAT | + |
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Preference number: 2 (lower is better) Translates to: DWDGHQNNSQYCILNFCACTYLP*HKELDH Trigger: ATGATCCAGTTCTTTGTGCCATGGCAAATAAGTACA...TGCACAGAAATTTAAGATACAATACTGCGAGTTATTTTGATGACCATCCCAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR CCA 72 bp | AGAACATACTCCCCAGGCTCTTGGAGCTCTGGTTCTTaGGTTGCTGGAGAGAACCCTGAGTCTCTTGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: RTYSPGSWSSGS*VAGENPESLGH Trigger: GTGACCAAGAGACTCAGGGTTCTCTCCAGCAACCCAAGAACCAGAGCTCCAAGAGCCTGGGGAGTATGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTTTGGAGCTCTGGTTCTaGGGTTGCTGGAGAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLTNLPNFPQGEHTPQALELWF*GCWREP Trigger: GGGTTCTCTCCAGCAACCCAAGAACCAGAGCTCCAA...AGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CAA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTCCCTCATAGCTCTTaGGACTTTGCTCCATCTGAC | + |
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Preference number: 3 (lower is better) Translates to: LFLPTSQISHKENILPRLFPHSS*DFAPSD Trigger: GTCAGATGGAGCAAAGTCCAAAGAGCTATGAGGGAA...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGTGGGACCTAATGAGATGGCTCGGCATTTAATGGCACTTGCTGCTCTAACATTCCCTCATAGCTCTTaGGACTTTGCTCCATCTGAC | + |
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Preference number: 3 (lower is better) Translates to: RVGPNEMARHLMALAALTFPHSS*DFAPSD Trigger: GTCAGATGGAGCAAAGTCCAAAGAGCTATGAGGGAA...TGTTAGAGCAGCAAGTGCCATTAAATGCCGAGCCATCTCATTAGGTCCCACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CAA 90 bp | TATGCCTTTAATCTGAGCATTCTAGAGACAGAAATTTCTAGTTGGGTCTCTGTGGCTCTGGTTCTTGGGTaGCTGGAGAGAACCCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: YAFNLSILETEISSWVSVALVLG*LERTLS Trigger: ACTCAGGGTTCTCTCCAGCAACCCAAGAACCAGAGC...CACAGAGACCCAACTAGAAATTTCTGTCTCTAGAATGCTCAGATTAAAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118717.10 |
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| 3UTR TCA 72 bp | AACTGGACTTTTCTGGTCCACCCAGATTTTGTCTCGTaGACTTCCCAATGTGCAGTAGGAAACCAGAATGAT | + |
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Preference number: 3 (lower is better) Translates to: NWTFLVHPDFVS*TSQCAVGNQND Trigger: ATCATTCTGGTTTCCTACTGCACATTGGGAAGTTCACGAGACAAAATCTGGGTGGACCAGAAAAGTCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR TCA 72 bp | AATAGGAAAAGCAACGTGGTGTTCCATTTCAGCGTGTaGCAAAAATATGGCTTCCCTCATAGCTCTTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: NRKSNVVFHFSV*QKYGFPHSSLD Trigger: GTCCAAAGAGCTATGAGGGAAGCCATATTTTTGTCACACGCTGAAATGGAACACCACGTTGCTTTTCCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR CCA 72 bp | CAAAGAACTGGATCATCTAAGAGAACTGGACTTTTCTaGTCCACCCAGATTTTGTCTCGTGAACTTCCCAAT | + |
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Preference number: 3 (lower is better) Translates to: QRTGSSKRTGLF*STQILSRELPN Trigger: ATTGGGAAGTTCACGAGACAAAATCTGGGTGGACCAGAAAAGTCCAGTTCTCTTAGATGATCCAGTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR CCA 72 bp | CAATCAGTGCTGGTGTTTGCTTGTACTTATTTGCCATaGCACAAAGAACTGGATCATCTAAGAGAACTGGAC | + |
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Preference number: 3 (lower is better) Translates to: QSVLVFACTYLP*HKELDHLRELD Trigger: GTCCAGTTCTCTTAGATGATCCAGTTCTTTGTGCCATGGCAAATAAGTACAAGCAAACACCAGCACTGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR-3UTR CAA 90 bp | GATTGGGATGGTCATCAAAATAACTCGCAGTATTGTATCTTAAATTTCTGTGCATTGATCCGCTTCTCCTaGAAACTCCTGGTCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: DWDGHQNNSQYCILNFCALIRFS*KLLVRT Trigger: GGTCCTGACCAGGAGTTTCAAGGAGAAGCGGATCAA...TGCACAGAAATTTAAGATACAATACTGCGAGTTATTTTGATGACCATCCCAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR TCA 72 bp | GTTCAGTCACCAGTATCCAAGATATCTCTCATATCATaGTGCATCAGCAGATCTTCTGATAGAAATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VQSPVSKISLIS*CISRSSDRNAG Trigger: GCCAGCATTTCTATCAGAAGATCTGCTGATGCATCATGATATGAGAGATATCTTGGATACTGGTGACTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CAA 90 bp | AACACAAGAATAGGAAAAGCAACGTGGTGTTCCATTTCAGCGTGTGACAAAAATATAGCTCTTTGGACTTaGCTCCATCTGACTGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: NTRIGKATWCSISACDKNIALWT*LHLTVN Trigger: ATTCACAGTCAGATGGAGCAAAGTCCAAAGAGCTAT...ATTTTTGTCACACGCTGAAATGGAACACCACGTTGCTTTTCCTATTCTTGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR TCA 72 bp | AATCCTTCAAATTCCCACCCAGAGATGCCTTTGCAATaGTTATCCTCAACAATGACTTCATGCCCAAAACTT | + |
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Preference number: 3 (lower is better) Translates to: NPSNSHPEMPLQ*LSSTMTSCPKL Trigger: AAGTTTTGGGCATGAAGTCATTGTTGAGGATAATCATTGCAAAGGCATCTCTGGGTGGGAATTTGAAGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR-3UTR CAA 90 bp | GATTGGGATGGTCATCAAAATAACTCGCAGTATTGTATCTTAAATTTCTGTGCAAGTGCTGGTGTTTGCTaGTACTTATTTGCCATGGCA | + |
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Preference number: 3 (lower is better) Translates to: DWDGHQNNSQYCILNFCASAGVC*YLFAMA Trigger: TGCCATGGCAAATAAGTACAAGCAAACACCAGCACT...TGCACAGAAATTTAAGATACAATACTGCGAGTTATTTTGATGACCATCCCAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| 3UTR CCA 72 bp | TTTAATCTGAGCATTCTAGAGACAGAAATTTCTAGTTaGGTCTCTGTGAGTACTATAACATTCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: FNLSILETEISS*VSVSTITFWST Trigger: TGTAGACCAGAATGTTATAGTACTCACAGAGACCCAACTAGAAATTTCTGTCTCTAGAATGCTCAGATTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118717.10 |
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| 3UTR CAA 72 bp | CAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTaGGAGCTCTGGTTCTTGGGTTGCTGGAGAGAACCC | + |
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Preference number: 4 (lower is better) Translates to: QISHKENILPRL*ELWFLGCWREP Trigger: GGGTTCTCTCCAGCAACCCAAGAACCAGAGCTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | TTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGGAGCCTTATCGGGCACAGTaGTTCCAAACCCCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPTSQISHKENILPRLLEPYRAQ*FQTPVQ Trigger: CTGCACTGGGGTTTGGAACCACTGTGCCCGATAAGG...CTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR GCA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCGTCACAGAGATCCACTaGTTCAGCCAACAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLPTSQISHKENILPRLVTEIH*FSQQFS Trigger: GGAAAACTGTTGGCTGAAGCAGTGGATCTCTGTGAC...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR GCA 90 bp | TTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGGAGGTCACAGAGATCCACTaGTTCAGCCAACAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTSQISHKENILPRLLEVTEIH*FSQQFS Trigger: GGAAAACTGTTGGCTGAAGCAGTGGATCTCTGTGAC...CTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGCTTCTAATGGCCTaGCCTACTTCCTCTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: LFLPTSQISHKENILPRLLLLMA*PTSSSI Trigger: AATAGAAGAGGAAGTAGGCCAGGCCATTAGAAGCAA...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR GCA 90 bp | TTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGGAGATCAGTGCTGGTGTTTaGTTGTACTTATTTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPTSQISHKENILPRLLEISAGV*LYLFAM Trigger: CATGGCAAATAAGTACAAGCAAACACCAGCACTGAT...CTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | AACACAAGAATAGGAAAAGCAACGTGGTGTTCCATTTCAGCGTGTGACAAAAATCCTTATCGGGCACAGTaGTTCCAAACCCCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTRIGKATWCSISACDKNPYRAQ*FQTPVQ Trigger: CTGCACTGGGGTTTGGAACCACTGTGCCCGATAAGG...ATTTTTGTCACACGCTGAAATGGAACACCACGTTGCTTTTCCTATTCTTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | TCTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTACCAATTCTGGTCGATaGAAAGTGCTCCAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTNLPNFPQGEHTPQATNSGR*KVLQSF Trigger: AAAGCTTTGGAGCACTTTCCATCGACCAGAATTGGT...AGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| 3UTR CAA 72 bp | TTAATGGCACTTGCTGCTCTAACAGAAGACTTAGGTTaGGCTCCCAGTGCCCACATGGTGATTCACAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMALAALTEDLG*APSAHMVIHNH Trigger: ATGATTGTGAATCACCATGTGGGCACTGGGAGCCAAACCTAAGTCTTCTGTTAGAGCAGCAAGTGCCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| 3UTR CAA 72 bp | GAAGCCAACTGGAATTCAAAAACCTTCATGAACTCTTaGATCCGCTTCTCCTTGAAACTCCTGGTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: EANWNSKTFMNS*IRFSLKLLVRT Trigger: GGTCCTGACCAGGAGTTTCAAGGAGAAGCGGATCAAAGAGTTCATGAAGGTTTTTGAATTCCAGTTGGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGACCTAATGAGATGGCTCGGCATTTAATGGCACTTGCTGCTCTAACAGTAATTGGTAACGAATaGCAATCAGTGCTGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVGPNEMARHLMALAALTVIGNE*QSVLVF Trigger: AAACACCAGCACTGATTGCCATTCGTTACCAATTAC...TGTTAGAGCAGCAAGTGCCATTAAATGCCGAGCCATCTCATTAGGTCCCACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGACCTAATGAGATGGCTCGGCATTTAATGGCACTTGCTGCTCTAACACAGAATGATGTCTTTTaGCTTACAATAGTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVGPNEMARHLMALAALTQNDVF*LTIVQH Trigger: ATGCTGGACTATTGTAAGTCAAAAGACATCATTCTG...TGTTAGAGCAGCAAGTGCCATTAAATGCCGAGCCATCTCATTAGGTCCCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | TCTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTTGTACTTATTTGCCATaGCACAAAGAACTGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTNLPNFPQGEHTPQACTYLP*HKELDH Trigger: ATGATCCAGTTCTTTGTGCCATGGCAAATAAGTACA...AGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR CCA 90 bp | GACAAAAATATGGCTTCCCTCATAGCTCTTTGGACTTTGCTCCATCTGACTGTGGTAATTGGTAACGAATaGCAATCAGTGCTGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DKNMASLIALWTLLHLTVVIGNE*QSVLVF Trigger: AAACACCAGCACTGATTGCCATTCGTTACCAATTAC...CACAGTCAGATGGAGCAAAGTCCAAAGAGCTATGAGGGAAGCCATATTTTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | GACAAAAATATGGCTTCCCTCATAGCTCTTTGGACTTTGCTCCATCTGACTGTGTCCTCTGAAGCCAACTaGAATTCAAAAACCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DKNMASLIALWTLLHLTVSSEAN*NSKTFM Trigger: CATGAAGGTTTTTGAATTCCAGTTGGCTTCAGAGGA...CACAGTCAGATGGAGCAAAGTCCAAAGAGCTATGAGGGAAGCCATATTTTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| 3UTR CAA 72 bp | GAATGGCAATCAGTGCTGGTGTTTGCTTGTACTTATTaGCCATGGCACAAAGAACTGGATCATCTAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EWQSVLVFACTY*PWHKELDHLRE Trigger: TTCTCTTAGATGATCCAGTTCTTTGTGCCATGGCAAATAAGTACAAGCAAACACCAGCACTGATTGCCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
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| CDS-3UTR TCA 90 bp | TCAGCGTGTGACAAAAATATGGCTTCCCTCATAGCTCTTTGGACTTTGCTCCATCAGAATGATGTCTTTTaGCTTACAATAGTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SACDKNMASLIALWTLLHQNDVF*LTIVQH Trigger: ATGCTGGACTATTGTAAGTCAAAAGACATCATTCTG...ATGGAGCAAAGTCCAAAGAGCTATGAGGGAAGCCATATTTTTGTCACACGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR GCA 90 bp | AACACAAGAATAGGAAAAGCAACGTGGTGTTCCATTTCAGCGTGTGACAAAAATAGAATCGTCTCCAGCTaGCTGAAGTTAAAGTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTRIGKATWCSISACDKNRIVSS*LKLKFD Trigger: GTCGAACTTTAACTTCAGGCAGCTGGAGACGATTCT...ATTTTTGTCACACGCTGAAATGGAACACCACGTTGCTTTTCCTATTCTTGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR GCA 90 bp | CAAAATAACTCGCAGTATTGTATCTTAAATTTCTGTGCAAGCCATCCAGGACTTAGAATCGTCTCCAGCTaGCTGAAGTTAAAGTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNNSQYCILNFCASHPGLRIVSS*LKLKFD Trigger: GTCGAACTTTAACTTCAGGCAGCTGGAGACGATTCT...AAGTCCTGGATGGCTTGCACAGAAATTTAAGATACAATACTGCGAGTTATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147180.2 |
||
| CDS-3UTR GCA 90 bp | GATACTTCCCAAGCAGAGACATATTCAGCTTTCTTCTCAACTTCCCTACATCTGTATCTTAAATTTCTGTaGAAGCCATCCAGGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTSQAETYSAFFSTSLHLYLKFL*KPSRTF Trigger: GAAAGTCCTGGATGGCTTGCACAGAAATTTAAGATA...CAGATGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGGAAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | AAAAGATACTTCCCAAGCAGAGACATATTCAGCTTTCTTCTCAACTTCCCTACATTGCTTCTAATGGCCTaGCCTACTTCCTCTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: KRYFPSRDIFSFLLNFPTLLLMA*PTSSSI Trigger: AATAGAAGAGGAAGTAGGCCAGGCCATTAGAAGCAA...TGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGGAAGTATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | TCAGCGTGTGACAAAAATATGGCTTCCCTCATAGCTCTTTGGACTTTGCTCCATATATTCATCAGTAAATaGATGATTGGGATGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SACDKNMASLIALWTLLHIFISK*MIGMVI Trigger: GATGACCATCCCAATCATCCATTTACTGATGAATAT...ATGGAGCAAAGTCCAAAGAGCTATGAGGGAAGCCATATTTTTGTCACACGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | AACACAAGAATAGGAAAAGCAACGTGGTGTTCCATTTCAGCGTGTGACAAAAATTGTACTTATTTGCCATaGCACAAAGAACTGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTRIGKATWCSISACDKNCTYLP*HKELDH Trigger: ATGATCCAGTTCTTTGTGCCATGGCAAATAAGTACA...ATTTTTGTCACACGCTGAAATGGAACACCACGTTGCTTTTCCTATTCTTGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | ACAATTAATTCCCTTAATGTTGAAAAATCCTTCAAATTCCCACCCAGAGATGCCTCCTCTGAAGCCAACTaGAATTCAAAAACCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TINSLNVEKSFKFPPRDASSEAN*NSKTFM Trigger: CATGAAGGTTTTTGAATTCCAGTTGGCTTCAGAGGA...GGCATCTCTGGGTGGGAATTTGAAGGATTTTTCAACATTAAGGGAATTAATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR GCA 90 bp | TTTGCAATGATTATCCTCAACAATGACTTCATGCCCAAAACTTCTAGCAAAACATTGCTTGTACTTATTTaGCATGGCACAAAGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FAMIILNNDFMPKTSSKTLLVLI*HGTKNW Trigger: CCAGTTCTTTGTGCCATGGCAAATAAGTACAAGCAA...TGTTTTGCTAGAAGTTTTGGGCATGAAGTCATTGTTGAGGATAATCATTGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR GCA 90 bp | TTTGCAATGATTATCCTCAACAATGACTTCATGCCCAAAACTTCTAGCAAAACATATCTTAAATTTCTGTaGAAGCCATCCAGGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FAMIILNNDFMPKTSSKTYLKFL*KPSRTF Trigger: GAAAGTCCTGGATGGCTTGCACAGAAATTTAAGATA...TGTTTTGCTAGAAGTTTTGGGCATGAAGTCATTGTTGAGGATAATCATTGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CCA 90 bp | ACAATTAATTCCCTTAATGTTGAAAAATCCTTCAAATTCCCACCCAGAGATGCCATATTCATCAGTAAATaGATGATTGGGATGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TINSLNVEKSFKFPPRDAIFISK*MIGMVI Trigger: GATGACCATCCCAATCATCCATTTACTGATGAATAT...GGCATCTCTGGGTGGGAATTTGAAGGATTTTTCAACATTAAGGGAATTAATTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CAA 90 bp | CTCTTCTTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTACTTCCTCTTCTATTaGGTACAAATAAGCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLPTSQISHKENILPRLYFLFY*VQISGV Trigger: GACTCCGCTTATTTGTACCAAATAGAAGAGGAAGTA...GAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CAA 90 bp | TTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGGAGTACTTCCTCTTCTATTaGGTACAAATAAGCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPTSQISHKENILPRLLEYFLFY*VQISGV Trigger: GACTCCGCTTATTTGTACCAAATAGAAGAGGAAGTA...CTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CAA 90 bp | TTACCAACCTCCCAAATTTCCCACAAGGAGAACATACTCCCCAGGCTCTTGGAGATCAACATAGTCCAGTaGTGCATTCTTCAGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPTSQISHKENILPRLLEINIVQ*CILQCL Trigger: AAGACACTGAAGAATGCACAACTGGACTATGTTGAT...CTCCAAGAGCCTGGGGAGTATGTTCTCCTTGTGGGAAATTTGGGAGGTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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| CDS-3UTR CAA 90 bp | TCAGCGTGTGACAAAAATATGGCTTCCCTCATAGCTCTTTGGACTTTGCTCCATAGTGCTGGTGTTTGCTaGTACTTATTTGCCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SACDKNMASLIALWTLLHSAGVC*YLFAMA Trigger: TGCCATGGCAAATAAGTACAAGCAAACACCAGCACT...ATGGAGCAAAGTCCAAAGAGCTATGAGGGAAGCCATATTTTTGTCACACGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR CAA 90 bp | AACACAAGAATAGGAAAAGCAACGTGGTGTTCCATTTCAGCGTGTGACAAAAATTTGATCCGCTTCTCCTaGAAACTCCTGGTCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: NTRIGKATWCSISACDKNLIRFS*KLLVRT Trigger: GGTCCTGACCAGGAGTTTCAAGGAGAAGCGGATCAA...ATTTTTGTCACACGCTGAAATGGAACACCACGTTGCTTTTCCTATTCTTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR CAA 90 bp | ACAATTAATTCCCTTAATGTTGAAAAATCCTTCAAATTCCCACCCAGAGATGCCTTGATCCGCTTCTCCTaGAAACTCCTGGTCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TINSLNVEKSFKFPPRDALIRFS*KLLVRT Trigger: GGTCCTGACCAGGAGTTTCAAGGAGAAGCGGATCAA...GGCATCTCTGGGTGGGAATTTGAAGGATTTTTCAACATTAAGGGAATTAATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR CAA 90 bp | AAAAGATACTTCCCAAGCAGAGACATATTCAGCTTTCTTCTCAACTTCCCTACAAGTGCTGGTGTTTGCTaGTACTTATTTGCCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRYFPSRDIFSFLLNFPTSAGVC*YLFAMA Trigger: TGCCATGGCAAATAAGTACAAGCAAACACCAGCACT...TGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGGAAGTATCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR CAA 90 bp | AAAAGATACTTCCCAAGCAGAGACATATTCAGCTTTCTTCTCAACTTCCCTACAGCTATTTTAGTAGCCTaGATAAGTTCATCCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KRYFPSRDIFSFLLNFPTAILVA*ISSSLG Trigger: TCCTAAGGATGAACTTATCAAGGCTACTAAAATAGC...TGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGGAAGTATCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS-3UTR CAA 90 bp | AATCTGAGCATTCTAGAGACAGAAATTTCTAGTTGGGTCTCTGTGAGTACTATAGCTATTTTAGTAGCCTaGATAAGTTCATCCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLSILETEISSWVSVSTIAILVA*ISSSLG Trigger: TCCTAAGGATGAACTTATCAAGGCTACTAAAATAGC...TATAGTACTCACAGAGACCCAACTAGAAATTTCTGTCTCTAGAATGCTCAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118717.10 |
||
| CDS TCA 72 bp | TATCGGGCACAGTGGTTCCAAACCCCAGTGCAGGGATaGAGTGACCATCGTTTAGTACCACACGTGGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: YRAQWFQTPVQG*SDHRLVPHVGI Trigger: TATCCCCACGTGTGGTACTAAACGATGGTCACTTCATCCCTGCACTGGGGTTTGGAACCACTGTGCCCGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
||
| CDS CAA 72 bp | TGGCGGAATCCAGTATCTATAGCTATTTTAGTAGCCTaGATAAGTTCATCCTTAGGAACCTTATCGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: WRNPVSIAILVA*ISSSLGTLSGT Trigger: TGTGCCCGATAAGGTTCCTAAGGATGAACTTATCAAGGCTACTAAAATAGCTATAGATACTGGATTCCGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041768.7 ENSMUST00000118717.10 |
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