Pregenerated sensors for AKR1B8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029762

Ensembl transcript IDs: ENSMUST00000038406.7

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	TCTCCGAGTCGCATTTGCTCGCAACAGTCTGTCCCTGGTTCAGCGTaGGGATTTAAACACAGCCTTGCCTATAGCAGGATGTCAGGCAGG	+
Preference number: 1 (lower is better) Translates to: SPSRICSQQSVPGSA*GFKHSLAYSRMSGR Trigger: CCTGCCTGACATCCTGCTATAGGCAAGGCTGTGTTTAAATCCCCACGCTGAACCAGGGACAGACTGTTGCGAGCAAATGCGACTCGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
3UTR TCA 72 bp	TGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTTaGCAAACATCCGGTCAGGTCAAATTAGTGAAGGAG	+
Preference number: 3 (lower is better) Translates to: CMPSNVTRVPGC*QTSGQVKLVKE Trigger: CTCCTTCACTAATTTGACCTGACCGGATGTTTGTCAACAACCAGGAACTCTGGTAACATTTGAGGGCATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
3UTR CCA 72 bp	TTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTaGTTGTTGACAAACATCCGGTCAGGTCAAATTAGT	+
Preference number: 3 (lower is better) Translates to: FYLHALKCYQSS*LLTNIRSGQIS Trigger: ACTAATTTGACCTGACCGGATGTTTGTCAACAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR TCA 90 bp	CAGTCTGTCCCTGGTTCAGCGTGGGGATTTAAACACAGCCTTGCCTATAGCAGGAATCAGAACCTGGGCTaGGGTTTTCTCGTGCTTGGC	+
Preference number: 4 (lower is better) Translates to: QSVPGSAWGFKHSLAYSRNQNLG*GFLVLG Trigger: GCCAAGCACGAGAAAACCTCAGCCCAGGTTCTGATT...CCTGCTATAGGCAAGGCTGTGTTTAAATCCCCACGCTGAACCAGGGACAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CCA 90 bp	TTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTTGACAAACATCCGGGCGCTAGGCCTGTCTaGGGAGCCCAGGGGACTGTA	+
Preference number: 4 (lower is better) Translates to: LSACPQMLPEFLVVDKHPGARPV*GAQGTV Trigger: TACAGTCCCCTGGGCTCCCCAGACAGGCCTAGCGCC...CGGATGTTTGTCAACAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CCA 90 bp	TCCCTGGTTCAGCGTGGGGATTTAAACACAGCCTTGCCTATAGCAGGATGTCAGGATACCCAGCGTCAATaGCCGCCTTCACAGCTTCTT	+
Preference number: 4 (lower is better) Translates to: SLVQRGDLNTALPIAGCQDTQRQ*PPSQLL Trigger: AAGAAGCTGTGAAGGCGGCCATTGACGCTGGGTATC...CTGACATCCTGCTATAGGCAAGGCTGTGTTTAAATCCCCACGCTGAACCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CCA 90 bp	CAGCGTGGGGATTTAAACACAGCCTTGCCTATAGCAGGATGTCAGGCAGGCTGGGTGAGGATTCTGCCTTaGTCATCTTTGGGGAATAAC	+
Preference number: 4 (lower is better) Translates to: QRGDLNTALPIAGCQAGWVRILP*SSLGNN Trigger: GTTATTCCCCAAAGATGACCAAGGCAGAATCCTCAC...CCAGCCTGCCTGACATCCTGCTATAGGCAAGGCTGTGTTTAAATCCCCACGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CCA 90 bp	TCCCTGGTTCAGCGTGGGGATTTAAACACAGCCTTGCCTATAGCAGGATGTCAGAACCGAATCAGAACCTaGGCTGAGGTTTTCTCGTGC	+
Preference number: 4 (lower is better) Translates to: SLVQRGDLNTALPIAGCQNRIRT*AEVFSC Trigger: GCACGAGAAAACCTCAGCCCAGGTTCTGATTCGGTT...CTGACATCCTGCTATAGGCAAGGCTGTGTTTAAATCCCCACGCTGAACCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR TCA 90 bp	TTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTTGACAAACATCCGCCTTCACAGCTTCTTTaGCTTGGTTTGGGGGAGACT	+
Preference number: 4 (lower is better) Translates to: LSACPQMLPEFLVVDKHPPSQLL*LGLGET Trigger: AGTCTCCCCCAAACCAAGTCAAAGAAGCTGTGAAGG...CGGATGTTTGTCAACAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR TCA 90 bp	CTCATTCTTTATTATTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTCTTGGCTTTGGTACTaGGTTCCACGAACGTGGCCA	+
Preference number: 4 (lower is better) Translates to: LILYYFICMPSNVTRVPGSWLWY*VPRTWP Trigger: TGGCCACGTTCGTGGAACTCAGTACCAAAGCCAAGA...ACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAATAATAAAGAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
3UTR CAA 72 bp	TATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTaGTTGACAAACATCCGGTCAGGTCAAATTAGTGAA	+
Preference number: 4 (lower is better) Translates to: YLHALKCYQSSW*LTNIRSGQISE Trigger: TTCACTAATTTGACCTGACCGGATGTTTGTCAACAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CCA 90 bp	TCATTCTTTATTATTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTTTCTTTGACTTGGTTTaGGGGAGACTTCCAGGTGCC	+
Preference number: 4 (lower is better) Translates to: SFFIILSACPQMLPEFLVFFDLV*GRLPGA Trigger: GGCACCTGGAAGTCTCCCCCAAACCAAGTCAAAGAA...AACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAATAATAAAGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CCA 90 bp	CATTCTTTATTATTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTGCCTTGGTCATCTTTaGGGAATAACTCCTTTCCTG	+
Preference number: 4 (lower is better) Translates to: HSLLFYLHALKCYQSSWLCLGHL*GITPFL Trigger: CAGGAAAGGAGTTATTCCCCAAAGATGACCAAGGCA...CAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAATAATAAAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR TCA 90 bp	ATTCTTTATTATTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTATGTTGTCTTACTGGTaGGGATTCTGCCTTGGTCAT	+
Preference number: 4 (lower is better) Translates to: ILYYFICMPSNVTRVPGCMLSYW*GFCLGH Trigger: ATGACCAAGGCAGAATCCTCACCAGTAAGACAACAT...ACAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAATAATAAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR TCA 90 bp	CATTCTTTATTATTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTGGAAATCAAAGACCTaGATGTTCTCCTGTATACGT	+
Preference number: 4 (lower is better) Translates to: HSLLFYLHALKCYQSSWLWKSKT*MFSCIR Trigger: ACGTATACAGGAGAACATTCAGGTCTTTGATTTCCA...CAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAATAATAAAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CAA 90 bp	ATTCTTTATTATTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTCACAGCTTCTTTGACTaGGTTTGGGGGAGACTTCCA	+
Preference number: 5 (lower is better) Translates to: ILYYFICMPSNVTRVPGCHSFFD*VWGRLP Trigger: TGGAAGTCTCCCCCAAACCAAGTCAAAGAAGCTGTG...ACAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAATAATAAAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038406.7
CDS-3UTR CAA 90 bp	TCTTTATTATTTTATCTGCATGCCCTCAAATGTTACCAGAGTTCCTGGTTGTTGCTGCCTTGGTCATCTTaGGGGAATAACTCCTTTCCT	+
Preference number: 5 (lower is better) Translates to: SLLFYLHALKCYQSSWLLLPWSS*GNNSFP Trigger: AGGAAAGGAGTTATTCCCCAAAGATGACCAAGGCAG...CAACAACCAGGAACTCTGGTAACATTTGAGGGCATGCAGATAAAATAATAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038406.7