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Pregenerated sensors for AKR1B3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001642

Ensembl transcript IDs: ENSMUST00000102980.11, ENSMUST00000154655.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGTGCCACCTAGTGCAGAGACACAGGACACTTGCAAGGGCAGATaGGGCAGAAAGAACAGGTGCAAGCCACTTGAGGAGGAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: KVPPSAETQDTCKGR*GRKNRCKPLEEEQG
Trigger: TCCCTGCTCCTCCTCAAGTGGCTTGCACCTGTTCTTTCTGCCTCATCTGCCCTTGCAAGTGTCCTGTGTCTCTGCACTAGGTGGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR GCA 90 bp CCCTCCAGACTCTATGTCAAACTAACTAACTCTCACCATCTGGTTTaGAAGGTGCCACCTAGTGCAGAGACACAGGACACTTGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: PSRLYVKLTNSHHLV*KVPPSAETQDTCKG
Trigger: GCCCTTGCAAGTGTCCTGTGTCTCTGCACTAGGTGGCACCTTGCAAACCAGATGGTGAGAGTTAGTTAGTTTGACATAGAGTCTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR CCA 90 bp GTGTTAAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTaGAAGAAACACCTTGGCTACTGGTACTGCCCTCCAGACTCTATG +
Preference number: 1 (lower is better)
Translates to: VLKSSRWVRRKTKEG*KKHLGYWYCPPDSM
Trigger: CATAGAGTCTGGAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGACTTTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR-3UTR GCA 90 bp GTACTGCCCTCCAGACTCTATGTCAAACTAACTAACTCTCACCATCTGGTTTGCGGCAGAAAGAACAGGTaGAAGCCACTTGAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: VLPSRLYVKLTNSHHLVCGRKNR*KPLEEE
Trigger: CTCCTCCTCAAGTGGCTTGCACCTGTTCTTTCTGCC...GCAAACCAGATGGTGAGAGTTAGTTAGTTTGACATAGAGTCTGGAGGGCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR-3UTR TCA 90 bp TTGGACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCACTTGCAAGGGCAGATaGGGCAGAAAGAACAGGTGC +
Preference number: 2 (lower is better)
Translates to: LDSKACFSLVGKGTCVKVTCKGR*GRKNRC
Trigger: GCACCTGTTCTTTCTGCCTCATCTGCCCTTGCAAGT...GACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR-3UTR CCA 90 bp TGGACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCCCTAACTCTCACCATCTaGTTTGCAAGGTGCCACCTA +
Preference number: 2 (lower is better)
Translates to: WTLKLASLWLERVLVLKSLTLTI*FARCHL
Trigger: TAGGTGGCACCTTGCAAACCAGATGGTGAGAGTTAG...GGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR-3UTR CAA 90 bp GAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACTGCCCTCACAGGTGCAAGCCACTaGAGGAGGAGCAGGGATCTG +
Preference number: 3 (lower is better)
Translates to: EERPRKAGRNTLATGTALTGASH*RRSRDL
Trigger: CAGATCCCTGCTCCTCCTCAAGTGGCTTGCACCTGT...GAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR CCA 72 bp TCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTaGAAGAAACACCTTGGCTACTGGTACTGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: SSRWVRRKTKEG*KKHLGYWYCPP
Trigger: TGGAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR CCA 72 bp AGTGGCACGGCTTGGACTCTAAAGCTTGCTTCTCTTTaGTTGGAAAGGGTACTTGTGTTAAAGTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: SGTAWTLKLASL*LERVLVLKSSR
Trigger: CCTGGAGGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTCCAAGCCGTGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
3UTR CCA 72 bp AAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTaGCTACTGGTACTGCCCTCCAGACTCTATGTCAAA +
Preference number: 3 (lower is better)
Translates to: KKKDQGRLEETP*LLVLPSRLYVK
Trigger: TTTGACATAGAGTCTGGAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR CCA 90 bp CTTGCAAGGGCAGATGAGGCAGAAAGAACAGGTGCAAGCCACTTGAGGAGGAGCGGGTGGCACTCGATCTaGTTCACCGCAGGCTTATAT +
Preference number: 4 (lower is better)
Translates to: LARADEAERTGASHLRRSGWHSI*FTAGLY
Trigger: ATATAAGCCTGCGGTGAACCAGATCGAGTGCCACCC...GCTCCTCCTCAAGTGGCTTGCACCTGTTCTTTCTGCCTCATCTGCCCTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR CCA 90 bp AAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGGCGCAGTCAATGTaGCGGTACCCCAAGTCAATA +
Preference number: 4 (lower is better)
Translates to: KVLQVGKKKDQGRLEETPWAQSM*RYPKSI
Trigger: TATTGACTTGGGGTACCGCCACATTGACTGCGCCCA...AGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR GCA 90 bp AAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACTGCCCACCAAGGGGACTATATaGTGTCACCACGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: KKKDQGRLEETPWLLVLPTKGTI*CHHDAF
Trigger: AAAGGCATCGTGGTGACAGCATATAGTCCCCTTGGT...GGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR GCA 90 bp AAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTATGCTGTCACCACGATaGCTTTGCTGTGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: KVLQVGKKKDQGRLEETPMLSPR*LCCGSI
Trigger: AATACTGCCACAGCAAAGGCATCGTGGTGACAGCAT...AGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR CCA 90 bp TTGGAAAGGGTACTTGTGTTAAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGACCTCCTTCTCATTCTaGTACACCTGGGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LERVLVLKSSRWVRRKTKTSFSF*YTWAQS
Trigger: TGACTGCGCCCAGGTGTACCAGAATGAGAAGGAGGT...CTTGGTCTTTCTTCTTACCCACCTGGAGGACTTTAACACAAGTACCCTTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR CCA 90 bp TGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACACGATGCCTTTGCTGTaGCAGTATTCAATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WVRRKTKEGWKKHLGYWYTMPLL*QYSISF
Trigger: GAAGCTGATTGAATACTGCCACAGCAAAGGCATCGT...GTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR TCA 90 bp GACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCCTCCAATCTGAAGAGGGTTaGAGTTGGAGACACCGATTG +
Preference number: 4 (lower is better)
Translates to: DSKACFSLVGKGTCVKVLQSEEG*SWRHRL
Trigger: CAATCGGTGTCTCCAACTTCAACCCTCTTCAGATTG...GAGGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR CAA 90 bp TGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACGGCATCTTGGTGCCGTaGTTGAGTTCCAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: WVRRKTKEGWKKHLGYWYGILVP*LSSRWL
Trigger: CAGCCATCTGGAACTCAACAACGGCACCAAGATGCC...GTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS-3UTR CAA 90 bp GACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCCTCCCTTTCACCATGCTCTaGTCATGGAACGTGCACCAC +
Preference number: 5 (lower is better)
Translates to: DSKACFSLVGKGTCVKVLPFTML*SWNVHH
Trigger: GTGGTGCACGTTCCATGACAAGAGCATGGTGAAAGG...GAGGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102980.11
CDS GCA 72 bp GTCACCTGGCCAGGAGGGGACTTCACTGTGTCTAAGTaGCCAGGTCCACCATACTCAAGGTTCTTAAAGATC +
Preference number: 6 (lower is better)
Translates to: VTWPGGDFTVSK*PGPPYSRFLKI
Trigger: GATCTTTAAGAACCTTGAGTATGGTGGACCTGGGCACTTAGACACAGTGAAGTCCCCTCCTGGCCAGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154655.2