Pregenerated sensors for AKR1B3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001642Ensembl transcript IDs: ENSMUST00000102980.11, ENSMUST00000154655.2
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AAGGTGCCACCTAGTGCAGAGACACAGGACACTTGCAAGGGCAGATaGGGCAGAAAGAACAGGTGCAAGCCACTTGAGGAGGAGCAGGGA | + |
Preference number: 1 (lower is better) Translates to: KVPPSAETQDTCKGR*GRKNRCKPLEEEQG Trigger: TCCCTGCTCCTCCTCAAGTGGCTTGCACCTGTTCTTTCTGCCTCATCTGCCCTTGCAAGTGTCCTGTGTCTCTGCACTAGGTGGCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR GCA 90 bp | CCCTCCAGACTCTATGTCAAACTAACTAACTCTCACCATCTGGTTTaGAAGGTGCCACCTAGTGCAGAGACACAGGACACTTGCAAGGGC | + |
Preference number: 1 (lower is better) Translates to: PSRLYVKLTNSHHLV*KVPPSAETQDTCKG Trigger: GCCCTTGCAAGTGTCCTGTGTCTCTGCACTAGGTGGCACCTTGCAAACCAGATGGTGAGAGTTAGTTAGTTTGACATAGAGTCTGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR CCA 90 bp | GTGTTAAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTaGAAGAAACACCTTGGCTACTGGTACTGCCCTCCAGACTCTATG | + |
Preference number: 1 (lower is better) Translates to: VLKSSRWVRRKTKEG*KKHLGYWYCPPDSM Trigger: CATAGAGTCTGGAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGACTTTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR-3UTR GCA 90 bp | GTACTGCCCTCCAGACTCTATGTCAAACTAACTAACTCTCACCATCTGGTTTGCGGCAGAAAGAACAGGTaGAAGCCACTTGAGGAGGAG | + |
Preference number: 2 (lower is better) Translates to: VLPSRLYVKLTNSHHLVCGRKNR*KPLEEE Trigger: CTCCTCCTCAAGTGGCTTGCACCTGTTCTTTCTGCC...GCAAACCAGATGGTGAGAGTTAGTTAGTTTGACATAGAGTCTGGAGGGCAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR-3UTR TCA 90 bp | TTGGACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCACTTGCAAGGGCAGATaGGGCAGAAAGAACAGGTGC | + |
Preference number: 2 (lower is better) Translates to: LDSKACFSLVGKGTCVKVTCKGR*GRKNRC Trigger: GCACCTGTTCTTTCTGCCTCATCTGCCCTTGCAAGT...GACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR-3UTR CCA 90 bp | TGGACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCCCTAACTCTCACCATCTaGTTTGCAAGGTGCCACCTA | + |
Preference number: 2 (lower is better) Translates to: WTLKLASLWLERVLVLKSLTLTI*FARCHL Trigger: TAGGTGGCACCTTGCAAACCAGATGGTGAGAGTTAG...GGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR-3UTR CAA 90 bp | GAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACTGCCCTCACAGGTGCAAGCCACTaGAGGAGGAGCAGGGATCTG | + |
Preference number: 3 (lower is better) Translates to: EERPRKAGRNTLATGTALTGASH*RRSRDL Trigger: CAGATCCCTGCTCCTCCTCAAGTGGCTTGCACCTGT...GAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR CCA 72 bp | TCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTaGAAGAAACACCTTGGCTACTGGTACTGCCCTCCA | + |
Preference number: 3 (lower is better) Translates to: SSRWVRRKTKEG*KKHLGYWYCPP Trigger: TGGAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR CCA 72 bp | AGTGGCACGGCTTGGACTCTAAAGCTTGCTTCTCTTTaGTTGGAAAGGGTACTTGTGTTAAAGTCCTCCAGG | + |
Preference number: 3 (lower is better) Translates to: SGTAWTLKLASL*LERVLVLKSSR Trigger: CCTGGAGGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTCCAAGCCGTGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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3UTR CCA 72 bp | AAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTaGCTACTGGTACTGCCCTCCAGACTCTATGTCAAA | + |
Preference number: 3 (lower is better) Translates to: KKKDQGRLEETP*LLVLPSRLYVK Trigger: TTTGACATAGAGTCTGGAGGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR CCA 90 bp | CTTGCAAGGGCAGATGAGGCAGAAAGAACAGGTGCAAGCCACTTGAGGAGGAGCGGGTGGCACTCGATCTaGTTCACCGCAGGCTTATAT | + |
Preference number: 4 (lower is better) Translates to: LARADEAERTGASHLRRSGWHSI*FTAGLY Trigger: ATATAAGCCTGCGGTGAACCAGATCGAGTGCCACCC...GCTCCTCCTCAAGTGGCTTGCACCTGTTCTTTCTGCCTCATCTGCCCTTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR CCA 90 bp | AAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGGCGCAGTCAATGTaGCGGTACCCCAAGTCAATA | + |
Preference number: 4 (lower is better) Translates to: KVLQVGKKKDQGRLEETPWAQSM*RYPKSI Trigger: TATTGACTTGGGGTACCGCCACATTGACTGCGCCCA...AGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR GCA 90 bp | AAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACTGCCCACCAAGGGGACTATATaGTGTCACCACGATGCCTTT | + |
Preference number: 4 (lower is better) Translates to: KKKDQGRLEETPWLLVLPTKGTI*CHHDAF Trigger: AAAGGCATCGTGGTGACAGCATATAGTCCCCTTGGT...GGGCAGTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR GCA 90 bp | AAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTATGCTGTCACCACGATaGCTTTGCTGTGGCAGTATT | + |
Preference number: 4 (lower is better) Translates to: KVLQVGKKKDQGRLEETPMLSPR*LCCGSI Trigger: AATACTGCCACAGCAAAGGCATCGTGGTGACAGCAT...AGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCACCTGGAGGACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR CCA 90 bp | TTGGAAAGGGTACTTGTGTTAAAGTCCTCCAGGTGGGTAAGAAGAAAGACCAAGACCTCCTTCTCATTCTaGTACACCTGGGCGCAGTCA | + |
Preference number: 4 (lower is better) Translates to: LERVLVLKSSRWVRRKTKTSFSF*YTWAQS Trigger: TGACTGCGCCCAGGTGTACCAGAATGAGAAGGAGGT...CTTGGTCTTTCTTCTTACCCACCTGGAGGACTTTAACACAAGTACCCTTTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR CCA 90 bp | TGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACACGATGCCTTTGCTGTaGCAGTATTCAATCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: WVRRKTKEGWKKHLGYWYTMPLL*QYSISF Trigger: GAAGCTGATTGAATACTGCCACAGCAAAGGCATCGT...GTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR TCA 90 bp | GACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCCTCCAATCTGAAGAGGGTTaGAGTTGGAGACACCGATTG | + |
Preference number: 4 (lower is better) Translates to: DSKACFSLVGKGTCVKVLQSEEG*SWRHRL Trigger: CAATCGGTGTCTCCAACTTCAACCCTCTTCAGATTG...GAGGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR CAA 90 bp | TGGGTAAGAAGAAAGACCAAGGAAGGCTGGAAGAAACACCTTGGCTACTGGTACGGCATCTTGGTGCCGTaGTTGAGTTCCAGATGGCTG | + |
Preference number: 5 (lower is better) Translates to: WVRRKTKEGWKKHLGYWYGILVP*LSSRWL Trigger: CAGCCATCTGGAACTCAACAACGGCACCAAGATGCC...GTACCAGTAGCCAAGGTGTTTCTTCCAGCCTTCCTTGGTCTTTCTTCTTACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS-3UTR CAA 90 bp | GACTCTAAAGCTTGCTTCTCTTTGGTTGGAAAGGGTACTTGTGTTAAAGTCCTCCCTTTCACCATGCTCTaGTCATGGAACGTGCACCAC | + |
Preference number: 5 (lower is better) Translates to: DSKACFSLVGKGTCVKVLPFTML*SWNVHH Trigger: GTGGTGCACGTTCCATGACAAGAGCATGGTGAAAGG...GAGGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCAAGCTTTAGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102980.11 |
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CDS GCA 72 bp | GTCACCTGGCCAGGAGGGGACTTCACTGTGTCTAAGTaGCCAGGTCCACCATACTCAAGGTTCTTAAAGATC | + |
Preference number: 6 (lower is better) Translates to: VTWPGGDFTVSK*PGPPYSRFLKI Trigger: GATCTTTAAGAACCTTGAGTATGGTGGACCTGGGCACTTAGACACAGTGAAGTCCCCTCCTGGCCAGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154655.2 |