Pregenerated sensors for AKR1B10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061758Ensembl transcript IDs: ENSMUST00000038383.14, ENSMUST00000115051.8, ENSMUST00000139156.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTaGTACTTGGCTTCAGTATTCCGCATGGAAAGGGAAGTCCTCGTT | + |
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Preference number: 1 (lower is better) Translates to: SGLHISEECPPGKRI*YLASVFRMEREVLV Trigger: AACGAGGACTTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR TCA 90 bp | CAAACATCCGGCCAGGTCAAATTAGTGACAAACATTGCCCTTTGCTaGGATGCATCTTCCTGTGACAGTCTGCTTCTAGTTGAACATGAG | + |
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Preference number: 1 (lower is better) Translates to: QTSGQVKLVTNIALC*DASSCDSLLLVEHE Trigger: CTCATGTTCAACTAGAAGCAGACTGTCACAGGAAGATGCATCTCAGCAAAGGGCAATGTTTGTCACTAATTTGACCTGGCCGGATGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR TCA 90 bp | CTGCTTCTAGTTGAACATGAGAATTTAAATGCAGAATTGCACTGTTaGGGCTGGTTTGGTATGATATCCAATAGGCTTGGCAAAAATAGG | + |
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Preference number: 1 (lower is better) Translates to: LLLVEHENLNAELHC*GWFGMISNRLGKNR Trigger: CCTATTTTTGCCAAGCCTATTGGATATCATACCAAACCAGCCTCAACAGTGCAATTCTGCATTTAAATTCTCATGTTCAACTAGAAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR TCA 90 bp | TATTTTATCTTTTTAATCTTCAGTGTTATTAGTGTTCCTGGTTTCTaGCAAACATCCGGCCAGGTCAAATTAGTGACAAACATTGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: YFIFLIFSVISVPGF*QTSGQVKLVTNIAL Trigger: AAGGGCAATGTTTGTCACTAATTTGACCTGGCCGGATGTTTGTCAGAAACCAGGAACACTAATAACACTGAAGATTAAAAAGATAAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGCTTCAGTATTCCGCCTCGTTATGACTTGCTaGAAACAGGCCACAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SEECPPGKRIWYLASVFRLVMTC*KQATGP Trigger: AGGGCCTGTGGCCTGTTTGCAGCAAGTCATAACGAG...GCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGCGCATCTGGTACTTGGCTTCAGTATTCCGCATGGAAAGGGAAGTCCTCAATCAGAACCTGTGCTaGAGTCCTCTTGTGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: GKRIWYLASVFRMEREVLNQNLC*SPLVLC Trigger: GCAAAGCACAAGAGGACTGCAGCACAGGTTCTGATT...GAGGACTTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR CAA 90 bp | TTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTaGGCTTCAGTATTCCGCATGGAAAGGGAAGTCCTCGTTATGACT | + |
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Preference number: 2 (lower is better) Translates to: LHISEECPPGKRIWY*ASVFRMEREVLVMT Trigger: AGTCATAACGAGGACTTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGCTTCAGTATTCCGCACGTTCCTCTCTATATaGAACCGAATCAGAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: SEECPPGKRIWYLASVFRTFLSI*NRIRTC Trigger: ACAGGTTCTGATTCGGTTCCATATAGAGAGGAACGT...GCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAACATCCGGCCAGGTCAAATTAGTGACAAACATTGCCCTTTGCTGAGATGCAACATTGCCCTTTGCTaGGATGCATCTTCCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: TNIRPGQISDKHCPLLRCNIALC*DASSCD Trigger: GTCACAGGAAGATGCATCTCAGCAAAGGGCAATGTT...GCATCTCAGCAAAGGGCAATGTTTGTCACTAATTTGACCTGGCCGGATGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAGCGCATCTGGTACTTGGCTTCAGTATTCCGCATGGAAAGGGAAGTCCTATTAGTGACAAACATTaGCCTTTGCTGAGATGCATC | + |
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Preference number: 2 (lower is better) Translates to: RQAHLVLGFSIPHGKGSPISDKH*PLLRCI Trigger: GATGCATCTCAGCAAAGGGCAATGTTTGTCACTAAT...AGGACTTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR-3UTR GCA 90 bp | TGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGCTTCAGAGTCCTCTTGTGCTTTaGAGCAATCTCTTTGATCTT | + |
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Preference number: 2 (lower is better) Translates to: CISVKSVLQASASGTWLQSPLVL*SNLFDL Trigger: AAGATCAAAGAGATTGCTGCAAAGCACAAGAGGACT...CTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR-3UTR GCA 90 bp | GCATCTTCCTGTGACAGTCTGCTTCTAGTTGAACATGAGAATTTAAATGCAGAATCAGTAGGAGCGGGTTaGATATCAGTGAAGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ASSCDSLLLVEHENLNAESVGAG*ISVKSV Trigger: GACACTCTTCACTGATATGCAACCCGCTCCTACTGA...TTCTGCATTTAAATTCTCATGTTCAACTAGAAGCAGACTGTCACAGGAAGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR CCA 72 bp | GTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTaGCTTCAGTATTCCGCATGGAAAGGGAAGTCCTCG | + |
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Preference number: 3 (lower is better) Translates to: VKSVLQASASGT*LQYSAWKGKSS Trigger: CGAGGACTTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCAAGCGCATCTGGTACTTGGCTTCAGTATTCCGCATGGAAAGGGAAGTCTGCAGAATTGCACTGTaGAGGCTGGTTTGGTATGAT | + |
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Preference number: 3 (lower is better) Translates to: PGKRIWYLASVFRMEREVCRIAL*RLVWYD Trigger: ATCATACCAAACCAGCCTCAACAGTGCAATTCTGCA...GACTTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR CCA 72 bp | CATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTaGTACTTGGCTTCAGTATTCCGCATGGAAAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: HISEECPPGKRI*YLASVFRMERE Trigger: TTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR TCA 72 bp | GCCATGTCCTCCTCACTTAACTGGAAGTCGAAGACCTaGATGTTCTCCTGTATTCGAGAAGGTGTCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: AMSSSLNWKSKT*MFSCIREGVTD Trigger: GTCTGTGACACCTTCTCGAATACAGGAGAACATTCAGGTCTTCGACTTCCAGTTAAGTGAGGAGGACATGGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR TCA 72 bp | GGCCAGGTCAAATTAGTGACAAACATTGCCCTTTGCTaGGATGCATCTTCCTGTGACAGTCTGCTTCTAGTT | + |
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Preference number: 3 (lower is better) Translates to: GQVKLVTNIALC*DASSCDSLLLV Trigger: AACTAGAAGCAGACTGTCACAGGAAGATGCATCTCAGCAAAGGGCAATGTTTGTCACTAATTTGACCTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR-3UTR CAA 90 bp | GCATCTTCCTGTGACAGTCTGCTTCTAGTTGAACATGAGAATTTAAATGCAGAAGTCAGTAGGAGCGGGTaGCATATCAGTGAAGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: ASSCDSLLLVEHENLNAEVSRSG*HISEEC Trigger: ACACTCTTCACTGATATGCAACCCGCTCCTACTGAC...TTCTGCATTTAAATTCTCATGTTCAACTAGAAGCAGACTGTCACAGGAAGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGACAGTCTGCTTCTAGTTGAACATGAGAATTTAAATGCAGAATTGCACTGTAGTCCTCGTTATGACTaGCTGCAAACAGGCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: CDSLLLVEHENLNAELHCSPRYD*LQTGHR Trigger: CCTGTGGCCTGTTTGCAGCAAGTCATAACGAGGACT...ACAGTGCAATTCTGCATTTAAATTCTCATGTTCAACTAGAAGCAGACTGTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGACAGTCTGCTTCTAGTTGAACATGAGAATTTAAATGCAGAATTGCACTGTTGTGCTGCAGTCCTCTaGTGCTTTGCAGCAATCTCT | + |
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Preference number: 3 (lower is better) Translates to: CDSLLLVEHENLNAELHCCAAVL*CFAAIS Trigger: AGAGATTGCTGCAAAGCACAAGAGGACTGCAGCACA...ACAGTGCAATTCTGCATTTAAATTCTCATGTTCAACTAGAAGCAGACTGTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| 3UTR TCA 72 bp | GTTGAACATGAGAATTTAAATGCAGAATTGCACTGTTaGGGCTGGTTTGGTATGATATCCAATAGGCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: VEHENLNAELHC*GWFGMISNRLG Trigger: GCCAAGCCTATTGGATATCATACCAAACCAGCCTCAACAGTGCAATTCTGCATTTAAATTCTCATGTTCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| 3UTR TCA 72 bp | TTTTTAATCTTCAGTGTTATTAGTGTTCCTGGTTTCTaGCAAACATCCGGCCAGGTCAAATTAGTGACAAAC | + |
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Preference number: 3 (lower is better) Translates to: FLIFSVISVPGF*QTSGQVKLVTN Trigger: GTTTGTCACTAATTTGACCTGGCCGGATGTTTGTCAGAAACCAGGAACACTAATAACACTGAAGATTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| CDS-3UTR CCA 90 bp | GGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTGGCACTAGGCCTGTCTaGGGAGCCCAGGGGACTGTA | + |
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Preference number: 4 (lower is better) Translates to: GAGCISVKSVLQASASGTGTRPV*GAQGTV Trigger: TACAGTCCCCTGGGCTCCCCAGACAGGCCTAGTGCC...AGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CCA 90 bp | AGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGGCACTAGGCCTGTCTaGGGAGCCCAGGGGACTGTA | + |
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Preference number: 4 (lower is better) Translates to: SGLHISEECPPGKRIWYLGTRPV*GAQGTV Trigger: TACAGTCCCCTGGGCTCCCCAGACAGGCCTAGTGCC...CAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTCCCTGACTTTAGCTaGGGGAGACTTCCAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSGLHISEECPPGKRIWYFPDFS*GRLPGA Trigger: GGCACCTGGAAGTCTCCCCCAGCTAAAGTCAGGGAA...GTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000139156.8 |
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| CDS-3UTR GCA 90 bp | GCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGCTCGTTATGACTTGCTaGAAACAGGCCACAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: AGCISVKSVLQASASGTWLVMTC*KQATGP Trigger: AGGGCCTGTGGCCTGTTTGCAGCAAGTCATAACGAG...CCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CCA 90 bp | AGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGCTTCAGTATTCCGCTTCCCTGACTTTAGCTaGGGGAGACTTCCAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SEECPPGKRIWYLASVFRFPDFS*GRLPGA Trigger: GGCACCTGGAAGTCTCCCCCAGCTAAAGTCAGGGAA...GCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| CDS-3UTR TCA 90 bp | AGGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACAAGACATTTCCAGACTaGAATCCCTGTGGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSGLHISEECPPGKRIWYKTFPD*NPCGQW Trigger: CCACTGGCCACAGGGATTTCAGTCTGGAAATGTCTT...GTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR GCA 90 bp | AGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGCTCGTTATGACTTGCTaGAAACAGGCCACAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SGLHISEECPPGKRIWYLLVMTC*KQATGP Trigger: AGGGCCTGTGGCCTGTTTGCAGCAAGTCATAACGAG...CAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| 3UTR CAA 72 bp | AGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTaGGCTTCAGTATTCCGCATGGAAAGGGAAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SEECPPGKRIWY*ASVFRMEREVL Trigger: GAGGACTTCCCTTTCCATGCGGAATACTGAAGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| CDS-3UTR TCA 90 bp | AGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGAAGACATTTCCAGACTaGAATCCCTGTGGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGLHISEECPPGKRIWYLKTFPD*NPCGQW Trigger: CCACTGGCCACAGGGATTTCAGTCTGGAAATGTCTT...CAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR TCA 90 bp | AGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGACTGCCTTTATCATCTaGAATCCCTGTGGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGLHISEECPPGKRIWYLTAFII*NPCGQW Trigger: CCACTGGCCACAGGGATTTCAGATGATAAAGGCAGT...CAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139156.8 |
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| CDS-3UTR GCA 90 bp | GCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGAATCAGAACCTGTGCTaGAGTCCTCTTGTGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: AGCISVKSVLQASASGTWNQNLC*SPLVLC Trigger: GCAAAGCACAAGAGGACTGCAGCACAGGTTCTGATT...CCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR GCA 90 bp | GGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGCTGCTGCAGTCCTCTTGTaGTTTGCAGCAATCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GLHISEECPPGKRIWYLAAAVLL*FAAISL Trigger: CAAAGAGATTGCTGCAAAGCACAAGAGGACTGCAGC...AGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CCA 90 bp | GTAGGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTCTTTCAATCTGGAAGTaGTTGAAGTTGGAGACACCC | + |
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Preference number: 4 (lower is better) Translates to: VGAGCISVKSVLQASASGLSIWK*LKLETP Trigger: GGGTGTCTCCAACTTCAACCACTTCCAGATTGAAAG...ACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CCA 90 bp | GCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGACGTTCCTCTCTATATaGAACCGAATCAGAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: AGCISVKSVLQASASGTWTFLSI*NRIRTC Trigger: ACAGGTTCTGATTCGGTTCCATATAGAGAGGAACGT...CCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR GCA 90 bp | AGGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACAGTCCTCTTGTGCTTTaGAGCAATCTCTTTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: RSGLHISEECPPGKRIWYSPLVL*SNLFDL Trigger: AAGATCAAAGAGATTGCTGCAAAGCACAAGAGGACT...GTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGCTACGTTCCTCTCTATATaGAACCGAATCAGAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: GLHISEECPPGKRIWYLATFLSI*NRIRTC Trigger: ACAGGTTCTGATTCGGTTCCATATAGAGAGGAACGT...AGCCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR GCA 90 bp | GCATCTTCCTGTGACAGTCTGCTTCTAGTTGAACATGAGAATTTAAATGCAGAAGCTGCAGTCCTCTTGTaGTTTGCAGCAATCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ASSCDSLLLVEHENLNAEAAVLL*FAAISL Trigger: CAAAGAGATTGCTGCAAAGCACAAGAGGACTGCAGC...TTCTGCATTTAAATTCTCATGTTCAACTAGAAGCAGACTGTCACAGGAAGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038383.14 |
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| CDS-3UTR GCA 90 bp | TGTGACAGTCTGCTTCTAGTTGAACATGAGAATTTAAATGCAGAATTGCACTGTAGTCCTCTTGTGCTTTaGAGCAATCTCTTTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: CDSLLLVEHENLNAELHCSPLVL*SNLFDL Trigger: AAGATCAAAGAGATTGCTGCAAAGCACAAGAGGACT...ACAGTGCAATTCTGCATTTAAATTCTCATGTTCAACTAGAAGCAGACTGTCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038383.14 |
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| CDS-3UTR CAA 90 bp | GTAGGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTAGTCCTCGTTATGACTaGCTGCAAACAGGCCACAGG | + |
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Preference number: 5 (lower is better) Translates to: VGAGCISVKSVLQASASGSPRYD*LQTGHR Trigger: CCTGTGGCCTGTTTGCAGCAAGTCATAACGAGGACT...ACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CAA 90 bp | GCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGGAGTCCTCGTTATGACTaGCTGCAAACAGGCCACAGG | + |
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Preference number: 5 (lower is better) Translates to: AGCISVKSVLQASASGTWSPRYD*LQTGHR Trigger: CCTGTGGCCTGTTTGCAGCAAGTCATAACGAGGACT...CCAAGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CAA 90 bp | GGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTACTTGTGCTGCAGTCCTCTaGTGCTTTGCAGCAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: GAGCISVKSVLQASASGTCAAVL*CFAAIS Trigger: AGAGATTGCTGCAAAGCACAAGAGGACTGCAGCACA...AGTACCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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| CDS-3UTR CAA 90 bp | AGTAGGAGCGGGTTGCATATCAGTGAAGAGTGTCCTCCAGGCAAGCGCATCTGGTGTGCTGCAGTCCTCTaGTGCTTTGCAGCAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: SRSGLHISEECPPGKRIWCAAVL*CFAAIS Trigger: AGAGATTGCTGCAAAGCACAAGAGGACTGCAGCACA...CCAGATGCGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038383.14 ENSMUST00000115051.8 |
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