Pregenerated sensors for AKNAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049565Ensembl transcript IDs: ENSMUST00000123556.8, ENSMUST00000133931.9
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCGGCAGCCCTGTCACCTCACTTCCTCGGGAGCCCCAGGGCCCTaGAAGACTGCCAGCATGTTCCTTGTTCATCTGAAATGGAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: PRQPCHLTSSGAPGP*KTASMFLVHLKWSL Trigger: GAGGCTCCATTTCAGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCCCTGGGGCTCCCGAGGAAGTGAGGTGACAGGGCTGCCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR GCA 90 bp | GCCCTGTCACCTCACTTCCTCGGGAGCCCCAGGGCCCTGGAAGACTaGCAGCATGTTCCTTGTTCATCTGAAATGGAGCCTCATGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: ALSPHFLGSPRALED*QHVPCSSEMEPHVA Trigger: GGCTACATGAGGCTCCATTTCAGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCCCTGGGGCTCCCGAGGAAGTGAGGTGACAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR TCA 90 bp | GCTGGCTTTGAACTCCAGATCCCCTTGTCTCCCTCTCTTGAGTGCTaGGGTTGCAGGTGTGCAATACCGCATCTGGCTTCAAAGGTAATA | + |
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Preference number: 1 (lower is better) Translates to: AGFELQIPLSPSLEC*GCRCAIPHLASKVI Trigger: TATTACCTTTGAAGCCAGATGCGGTATTGCACACCTGCAACCTCAGCACTCAAGAGAGGGAGACAAGGGGATCTGGAGTTCAAAGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR GCA 90 bp | CTTTTGGTGGGTCTTCCTCACAGACTCTCTGGGAGTTCTGAGTCTTaGTTCCGTAGGCTTCACATTTGTTACTCTGGAGCCCAGTACCAG | + |
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Preference number: 1 (lower is better) Translates to: LLVGLPHRLSGSSES*FRRLHICYSGAQYQ Trigger: CTGGTACTGGGCTCCAGAGTAACAAATGTGAAGCCTACGGAAGCAAGACTCAGAACTCCCAGAGAGTCTGTGAGGAAGACCCACCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCCCCTCTCTTGAGTGCTaGGGTTGCAGGTGTGCAATA | + |
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Preference number: 2 (lower is better) Translates to: ASSLSSLEVASCGPPLGSPSLEC*GCRCAI Trigger: TATTGCACACCTGCAACCTCAGCACTCAAGAGAGGG...GCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CAA 90 bp | TTCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTaGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCCCTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: FSIFCFIFRASSLSS*EVASCGPPLGSPVT Trigger: GGTGACAGGGCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAGTACCAGGATCAGGACAAAAGTCGGGTCCTGGATCAGTACCGAGAGCCCAGAATAGCAGAGGATaGCCTTTTGTCTCCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPVPGSGQKSGPGSVPRAQNSRG*PFVSVS Trigger: GGAGACGGAGACAAAAGGTCATCCTCTGCTATTCTG...GGCTCTCGGTACTGATCCAGGACCCGACTTTTGTCCTGATCCTGGTACTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CAA 90 bp | AGCCCAGGCTGGCCTGGAATTCACAGAATAGCAGAGGATGACCTTTaGTCTCCGTCTCCCCAAATGCAGGATGATAGGTGTGTGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: SPGWPGIHRIAEDDL*SPSPQMQDDRCVQL Trigger: CAGTTGCACACACCTATCATCCTGCATTTGGGGAGACGGAGACAAAAGGTCATCCTCTGCTATTCTGTGAATTCCAGGCCAGCCTGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CAA 90 bp | TTAAGTCATCTTGTCCTGGAGTGTTATATCTATAATAAAATTCTTTaGGTGGGTCTTCCTCACAGACTCTCTGGGAGTTCTGAGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LSHLVLECYIYNKIL*VGLPHRLSGSSESC Trigger: GCAAGACTCAGAACTCCCAGAGAGTCTGTGAGGAAGACCCACCAAAAGAATTTTATTATAGATATAACACTCCAGGACAAGATGACTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CCA 72 bp | GGCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTaGCCCTCCCCTCGGCAGCCCTGTCACCTCACTTCC | + |
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Preference number: 3 (lower is better) Translates to: GQFTELLGGGLL*PSPRQPCHLTS Trigger: GGAAGTGAGGTGACAGGGCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCGCAGAGGATGACCTTTaGTCTCCGTCTCCCCAAATG | + |
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Preference number: 3 (lower is better) Translates to: ASSLSSLEVASCGPPLGSAEDDL*SPSPQM Trigger: CATTTGGGGAGACGGAGACAAAAGGTCATCCTCTGC...GCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGAACTCCAGATCCCCTaGTCTCCCTCTCTTGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: FRASSLSSLEVASCGPPLELQIP*SPSLEC Trigger: GCACTCAAGAGAGGGAGACAAGGGGATCTGGAGTTC...GAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CCA 72 bp | CCCTGTCACCTCACTTCCTCGGGAGCCCCAGGGCCCTaGAAGACTGCCAGCATGTTCCTTGTTCATCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PCHLTSSGAPGP*KTASMFLVHLK Trigger: TTTCAGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCCCTGGGGCTCCCGAGGAAGTGAGGTGACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CCA 72 bp | GAGCCCAGTACCAGGATCAGGACAAAAGTCGGGTCCTaGATCAGTACCGAGAGCCGAGTCTTGGGGCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: EPSTRIRTKVGS*ISTESRVLGQC Trigger: ACACTGCCCCAAGACTCGGCTCTCGGTACTGATCCAGGACCCGACTTTTGTCCTGATCCTGGTACTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR TCA 72 bp | GGCCCTGGAAGACTGCCAGCATGTTCCTTGTTCATCTaGAATGGAGCCTCATGTAGCCCAGGCTGGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: GPGRLPACSLFI*NGASCSPGWPG Trigger: TCCAGGCCAGCCTGGGCTACATGAGGCTCCATTTCAGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR TCA 72 bp | TCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTaGGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: SPFSVSSSGPVH*APWRWPPVALP Trigger: GGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR GCA 72 bp | GGTCTTCCTCACAGACTCTCTGGGAGTTCTGAGTCTTaGTTCCGTAGGCTTCACATTTGTTACTCTGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: GLPHRLSGSSES*FRRLHICYSGA Trigger: GGCTCCAGAGTAACAAATGTGAAGCCTACGGAAGCAAGACTCAGAACTCCCAGAGAGTCTGTGAGGAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGAGCATTCGAGGTCTCTaGGAGAGTTTCATAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QGQFTELLGGGLLWPSPRSIRGL*ESFIAS Trigger: GCTGGCTATGAAACTCTCCCAGAGACCTCGAATGCT...CCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CAA 72 bp | TTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTaGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FCFIFRASSLSS*EVASCGPPLGS Trigger: GCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGATCTTCTTTATCAGCTaGAACAGGAGAAGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QGQFTELLGGGLLWPSPRIFFIS*NRRSQG Trigger: GCCCTGGCTTCTCCTGTTCCAGCTGATAAAGAAGAT...CCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR GCA 90 bp | GCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCGGGAGCAACAGGGCTTaGTGCTATTTATTGAACCAT | + |
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Preference number: 4 (lower is better) Translates to: ASSLSSLEVASCGPPLGSGSNRA*CYLLNH Trigger: ATGGTTCAATAAATAGCAGCAAGCCCTGTTGCTCCC...GCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGAAGCCAGGGCGCATTaGTTATCTTTATCATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: FRASSLSSLEVASCGPPLEARAH*LSLSCL Trigger: TAGGCATGATAAAGATAAGCAATGCGCCCTGGCTTC...GAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | GCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCAACCTTAGGAAAATCTaGAAACTGGTAGTGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: ASSLSSLEVASCGPPLGSNLRKI*KLVVHL Trigger: CAAGTGCACTACCAGTTTCCAGATTTTCCTAAGGTT...GCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | TTGAACTCCAGATCCCCTTGTCTCCCTCTCTTGAGTGCTGAGGTTGCAGGTGTGCCTGTGAGAGGTTCTTaGCAGGTGTGTGTGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LNSRSPCLPLLSAEVAGVPVRGS*QVCVAG Trigger: GCCTGCCACACACACCTGCCAAGAACCTCTCACAGG...CACACCTGCAACCTCAGCACTCAAGAGAGGGAGACAAGGGGATCTGGAGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR TCA 90 bp | AGCCCAGTACCAGGATCAGGACAAAAGTCGGGTCCTGGATCAGTACCGAGAGCCGACTGGGCTGGCCAGTaGATTCTGGGATTTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPVPGSGQKSGPGSVPRADWAGQ*ILGFVL Trigger: AAGAACAAATCCCAGAATTCACTGGCCAGCCCAGTC...GGCTCTCGGTACTGATCCAGGACCCGACTTTTGTCCTGATCCTGGTACTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | TTGAACTCCAGATCCCCTTGTCTCCCTCTCTTGAGTGCTGAGGTTGCAGGTGTGCTTGGCAGGTGTGTGTaGCAGGCTGCACCTGTATTT | + |
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Preference number: 4 (lower is better) Translates to: LNSRSPCLPLLSAEVAGVLGRCV*QAAPVF Trigger: AAATACAGGTGCAGCCTGCCACACACACCTGCCAAG...CACACCTGCAACCTCAGCACTCAAGAGAGGGAGACAAGGGGATCTGGAGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | TTGAACTCCAGATCCCCTTGTCTCCCTCTCTTGAGTGCTGAGGTTGCAGGTGTGTTTTGGGGACTGGGCTaGCCAGTGAATTCTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: LNSRSPCLPLLSAEVAGVFWGLG*PVNSGI Trigger: AATCCCAGAATTCACTGGCCAGCCCAGTCCCCAAAA...CACACCTGCAACCTCAGCACTCAAGAGAGGGAGACAAGGGGATCTGGAGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR TCA 90 bp | TTGAACTCCAGATCCCCTTGTCTCCCTCTCTTGAGTGCTGAGGTTGCAGGTGTGCAGAACAACTTCTGCTaGGACAGGAGAGGTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: LNSRSPCLPLLSAEVAGVQNNFC*DRRGVI Trigger: AATGACACCTCTCCTGTCTCAGCAGAAGTTGTTCTG...CACACCTGCAACCTCAGCACTCAAGAGAGGGAGACAAGGGGATCTGGAGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR GCA 90 bp | TTCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGATCTTCCTGATGGGTaGTCTTCCCAGCAGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: FSIFCFIFRASSLSSLEVDLPDG*SSQQPL Trigger: CAGTGGCTGCTGGGAAGAGCACCCATCAGGAAGATC...CACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | CTGGAAGACTGCCAGCATGTTCCTTGTTCATCTGAAATGGAGCCTCATGTAGCCAGCAGAGCTGTGTCCTaGCGCACCTCACAGTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LEDCQHVPCSSEMEPHVASRAVS*RTSQLE Trigger: TTCTAACTGTGAGGTGCGCCAGGACACAGCTCTGCT...GGCTACATGAGGCTCCATTTCAGATGAACAAGGAACATGCTGGCAGTCTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR TCA 90 bp | TTCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGTTAGAAGCCACTTCCTaGGGGTCTTCTCCTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FSIFCFIFRASSLSSLEVLEATS*GSSPAR Trigger: TCTGGCAGGAGAAGACCCTCAGGAAGTGGCTTCTAA...CACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR TCA 90 bp | TTCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGAAGCTTGGATCTTCCTaGTGGGTGCTCTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FSIFCFIFRASSLSSLEVKLGSS*WVLFPA Trigger: TGCTGGGAAGAGCACCCATCAGGAAGATCCAAGCTT...CACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR GCA 90 bp | AGCCCAGTACCAGGATCAGGACAAAAGTCGGGTCCTGGATCAGTACCGAGAGCCTGCTTATCTTTATCATaGCTATTGCCGACAAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SPVPGSGQKSGPGSVPRACLSLS*LLPTSS Trigger: TGAACTTGTCGGCAATAGGCATGATAAAGATAAGCA...GGCTCTCGGTACTGATCCAGGACCCGACTTTTGTCCTGATCCTGGTACTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | AGCCCAGTACCAGGATCAGGACAAAAGTCGGGTCCTGGATCAGTACCGAGAGCCCTTATGTCTTGCAAATaGCAGAAAGAGTCCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SPVPGSGQKSGPGSVPRALMSCK*QKESCF Trigger: AAAACAGGACTCTTTCTGCCATTTGCAAGACATAAG...GGCTCTCGGTACTGATCCAGGACCCGACTTTTGTCCTGATCCTGGTACTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR TCA 90 bp | CTGGAAGACTGCCAGCATGTTCCTTGTTCATCTGAAATGGAGCCTCATGTAGCCTGCTCTCCGGAGAGATaGTGGAGTAAAATATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LEDCQHVPCSSEMEPHVACSPER*WSKISE Trigger: CTCAGATATTTTACTCCATCATCTCTCCGGAGAGCA...GGCTACATGAGGCTCCATTTCAGATGAACAAGGAACATGCTGGCAGTCTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | TCCGTAGGCTTCACATTTGTTACTCTGGAGCCCAGTACCAGGATCAGGACAAAACTGGCCAGTGAATTCTaGGATTTGTTCTTTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SVGFTFVTLEPSTRIRTKLASEF*DLFFGV Trigger: TACCCCAAAGAACAAATCCCAGAATTCACTGGCCAG...TTTTGTCCTGATCCTGGTACTGGGCTCCAGAGTAACAAATGTGAAGCCTACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | TCCGTAGGCTTCACATTTGTTACTCTGGAGCCCAGTACCAGGATCAGGACAAAAGTTAGCTGTGGTAAGTaGTTTGCTAGAGAGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SVGFTFVTLEPSTRIRTKVSCGK*FAREFP Trigger: GGGAAACTCTCTAGCAAACCACTTACCACAGCTAAC...TTTTGTCCTGATCCTGGTACTGGGCTCCAGAGTAACAAATGTGAAGCCTACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR GCA 90 bp | TTCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGTGCAGTCTTATGTCTTaGAAATGGCAGAAAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: FSIFCFIFRASSLSSLEVCSLMS*KWQKES Trigger: GGACTCTTTCTGCCATTTGCAAGACATAAGACTGCA...CACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR GCA 90 bp | TGTGCAACTGTATCTGATTTTGATTTTGAGATAGGATCTTATGTAGCCCAGCCTGTGTGTGTGGCAGGCTaGACCTGTATTTGTTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: CATVSDFDFEIGSYVAQPVCVAG*TCICCE Trigger: TTCGCAACAAATACAGGTGCAGCCTGCCACACACAC...AGGCTGGGCTACATAAGATCCTATCTCAAAATCAAAATCAGATACAGTTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| 3UTR CAA 72 bp | CTTGTCCTGGAGTGTTATATCTATAATAAAATTCTTTaGGTGGGTCTTCCTCACAGACTCTCTGGGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVLECYIYNKIL*VGLPHRLSGSS Trigger: AGAACTCCCAGAGAGTCTGTGAGGAAGACCCACCAAAAGAATTTTATTATAGATATAACACTCCAGGACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR TCA 90 bp | TGTGCAACTGTATCTGATTTTGATTTTGAGATAGGATCTTATGTAGCCCAGCCTGAGAAAGGATCTTTTTaGGGTGTTGGTGTCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: CATVSDFDFEIGSYVAQPEKGSF*GVGVKF Trigger: GAATTTGACACCAACACCTCAAAAAGATCCTTTCTC...AGGCTGGGCTACATAAGATCCTATCTCAAAATCAAAATCAGATACAGTTGCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAACTGTATCTGATTTTGATTTTGAGATAGGATCTTATGTAGCCCAGCCTAAAATATCTGAGACGTaGGACTTTGAGGTATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CATVSDFDFEIGSYVAQPKISET*DFEVSS Trigger: AGAAGATACCTCAAAGTCCCACGTCTCAGATATTTT...AGGCTGGGCTACATAAGATCCTATCTCAAAATCAAAATCAGATACAGTTGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGGCCAGTCGCCTGAATTaGCTTTGTCTGGCAGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: QGQFTELLGGGLLWPSPRASRLN*LCLAAV Trigger: GACAGCTGCCAGACAAAGCAAATTCAGGCGACTGGC...CCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CAA 90 bp | GCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCTCGCCTGAATTTGCTTaGTCTGGCAGCTGTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: ASSLSSLEVASCGPPLGSSPEFA*SGSCLW Trigger: CCAGAGACAGCTGCCAGACAAAGCAAATTCAGGCGA...GCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS CCA 90 bp | CCTCGGCAGCCCTGTCACCTCACTTCCTCGGGAGCCCCAGGGCCCTaGAAGACTGCCAGCATGTTCCTTGTTCATCAGTCTTATGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PRQPCHLTSSGAPGP*KTASMFLVHQSYVL Trigger: CAAGACATAAGACTGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCCCTGGGGCTCCCGAGGAAGTGAGGTGACAGGGCTGCCGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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| CDS-3UTR CAA 90 bp | GCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCGCTTGCTGCTATTTATaGAACCATTTTGGGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: ASSLSSLEVASCGPPLGSACCYL*NHFGDW Trigger: CCAGTCCCCAAAATGGTTCAATAAATAGCAGCAAGC...GCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS GCA 90 bp | GCCCTGTCACCTCACTTCCTCGGGAGCCCCAGGGCCCTGGAAGACTaGCAGCATGTTCCTTGTTCATCAGTCTTATGTCTTGCAAATGGC | + |
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Preference number: 5 (lower is better) Translates to: ALSPHFLGSPRALED*QHVPCSSVLCLANG Trigger: GCCATTTGCAAGACATAAGACTGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCCCTGGGGCTCCCGAGGAAGTGAGGTGACAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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| CDS-3UTR CAA 90 bp | CAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGTATCTTGCACAACTGTaGATTTATTCGTCAACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QGQFTELLGGGLLWPSPRYLAQL*IYSSTS Trigger: CGAGGTTGACGAATAAATCAACAGTTGTGCAAGATA...CCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CAA 90 bp | CAGTTCACTGAGCTCCTTGGAGGTGGCCTCCTGTGGCCCTCCCCTCGGCAGCCCGATCTTTTTGAGGTGTaGGTGTCAAATTCAAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QFTELLGGGLLWPSPRQPDLFEV*VSNSSN Trigger: GTTGCTTGAATTTGACACCAACACCTCAAAAAGATC...GGGCTGCCGAGGGGAGGGCCACAGGAGGCCACCTCCAAGGAGCTCAGTGAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS TCA 90 bp | AGCAGAGCTGTGTCCTGGCGCACCTCACAGTTAGAAGCCACTTCCTaGGGGTCTTCTCCTGCCAGAACAACTTCTGCTGAGACAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRAVSWRTSQLEATS*GSSPARTTSAETGE Trigger: CTCTCCTGTCTCAGCAGAAGTTGTTCTGGCAGGAGAAGACCCTCAGGAAGTGGCTTCTAACTGTGAGGTGCGCCAGGACACAGCTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS TCA 90 bp | AAACTGGTAGTGCACTTGAGCCTGGCTGTATCTGAGCCAGTCGCCTaGATTTGCTTTGTCTGGCAGCTGTCTCTGGGGTGTCTGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLVVHLSLAVSEPVA*ICFVWQLSLGCLPQ Trigger: CTGAGGCAGACACCCCAGAGACAGCTGCCAGACAAAGCAAATTCAGGCGACTGGCTCAGATACAGCCAGGCTCAAGTGCACTACCAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS-3UTR CAA 90 bp | CTGGCTTTGAACTCCAGATCCCCTTGTCTCCCTCTCTTGAGTGCTGAGGTTGCAGGGGAGCAACAGGGCTaGCTGCTATTTATTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LALNSRSPCLPLLSAEVAGEQQG*LLFIEP Trigger: TGGTTCAATAAATAGCAGCAAGCCCTGTTGCTCCCC...TGCAACCTCAGCACTCAAGAGAGGGAGACAAGGGGATCTGGAGTTCAAAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CAA 90 bp | AGCCCAGTACCAGGATCAGGACAAAAGTCGGGTCCTGGATCAGTACCGAGAGCCCTGCACCTGTATTTGTaGCGAAGGTTCAGGAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SPVPGSGQKSGPGSVPRALHLYL*RRFRKF Trigger: AAATTTCCTGAACCTTCGCAACAAATACAGGTGCAG...GGCTCTCGGTACTGATCCAGGACCCGACTTTTGTCCTGATCCTGGTACTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS GCA 90 bp | CAGTCGCCTGAATTTGCTTTGTCTGGCAGCTGTCTCTGGGGTGTCTaGCTCAGGCAGCTTTTATATTTATCACCTGGACCTTTAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSPEFALSGSCLWGV*LRQLLYLSPGPLVL Trigger: CAGGACTAAAGGTCCAGGTGATAAATATAAAAGCTGCCTGAGGCAGACACCCCAGAGACAGCTGCCAGACAAAGCAAATTCAGGCGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS GCA 90 bp | GGTTCAAGTCCTGTGAGAGGTTCTTGGCAGGTGTGTGTGGCAGGCTaGACCTGTATTTGTTGCGAAGGTTCAGGAAATTTCCATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPVRGSWQVCVAG*TCICCEGSGNFHFC Trigger: GCAGAAATGGAAATTTCCTGAACCTTCGCAACAAATACAGGTGCAGCCTGCCACACACACCTGCCAAGAACCTCTCACAGGACTTGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS TCA 90 bp | CATTCGAGGTCTCTGGGAGAGTTTCATAGCCAGCACCTGGACCCCTaGAGAATTGCTCTCCGGAGAGATGATGGAGTAAAATATCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSRSLGEFHSQHLDP*RIALRRDDGVKYLR Trigger: TCTCAGATATTTTACTCCATCATCTCTCCGGAGAGCAATTCTTCAGGGGTCCAGGTGCTGGCTATGAAACTCTCCCAGAGACCTCGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS-3UTR CAA 90 bp | AGCCCAGTACCAGGATCAGGACAAAAGTCGGGTCCTGGATCAGTACCGAGAGCCAGTGAATTCTGGGATTaGTTCTTTGGGGTAATACTT | + |
|
Preference number: 5 (lower is better) Translates to: SPVPGSGQKSGPGSVPRASEFWD*FFGVIL Trigger: AAGTATTACCCCAAAGAACAAATCCCAGAATTCACT...GGCTCTCGGTACTGATCCAGGACCCGACTTTTGTCCTGATCCTGGTACTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CAA 90 bp | TTCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGTCCTGGTTAGAAAGCTaGGATCTTCCTGATGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSIFCFIFRASSLSSLEVSWLES*DLPDGC Trigger: GCACCCATCAGGAAGATCCAAGCTTTCTAACCAGGA...CACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS CCA 90 bp | AAATTCAAGCAACATTTCTCAGGTTCAAGTCCTGTGAGAGGTTCTTaGCAGGTGTGTGTGGCAGGCTGCACCTGTATTTGTTGCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KFKQHFSGSSPVRGS*QVCVAGCTCICCEG Trigger: ACCTTCGCAACAAATACAGGTGCAGCCTGCCACACACACCTGCCAAGAACCTCTCACAGGACTTGAACCTGAGAAATGTTGCTTGAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS GCA 90 bp | GGCTGCACCTGTATTTGTTGCGAAGGTTCAGGAAATTTCCATTTCTaGTCCGGTTGTTTTTCAACACGATTTGACCCAGACGTGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCTCICCEGSGNFHF*SGCFSTRFDPDVVP Trigger: AGGAACCACGTCTGGGTCAAATCGTGTTGAAAAACAACCGGAGCAGAAATGGAAATTTCCTGAACCTTCGCAACAAATACAGGTGCAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CCA 90 bp | ATCTTAGATTCCATTTCTTCCATGTTATCACTGGGACATAAGGACTaGATTCTAGGAATTCCCAGGCAGCAGAGGTGGGGTGAGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILDSISSMLSLGHKD*ILGIPRQQRWGEGV Trigger: AACACCCTCACCCCACCTCTGCTGCCTGGGAATTCCTAGAATCCAGTCCTTATGTCCCAGTGATAACATGGAAGAAATGGAATCTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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| CDS-3UTR CAA 90 bp | TTCTCCATTTTCTGTTTCATCTTCAGGGCCAGTTCACTGAGCTCCTTGGAGGTGGTTTTTCAACACGATTaGACCCAGACGTGGTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: FSIFCFIFRASSLSSLEVVFQHD*TQTWFL Trigger: TAGGAACCACGTCTGGGTCAAATCGTGTTGAAAAAC...CACCTCCAAGGAGCTCAGTGAACTGGCCCTGAAGATGAAACAGAAAATGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS-3UTR CAA 90 bp | TCCGTAGGCTTCACATTTGTTACTCTGGAGCCCAGTACCAGGATCAGGACAAAAAGGCAGGTCCTCCTGTaGTTTATAAGTCATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVGFTFVTLEPSTRIRTKRQVLL*FISHIF Trigger: GAAGATATGACTTATAAACAACAGGAGGACCTGCCT...TTTTGTCCTGATCCTGGTACTGGGCTCCAGAGTAACAAATGTGAAGCCTACGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123556.8 |
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| CDS CCA 90 bp | AAATTATCTTGCACAACTGTTGATTTATTCGTCAACCTCGGAGAATaGCCGCCTTCGTTAGCTGTGGTAAGTGGTTTGCTAGAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLSCTTVDLFVNLGE*PPSLAVVSGLLESF Trigger: GAAACTCTCTAGCAAACCACTTACCACAGCTAACGAAGGCGGCCATTCTCCGAGGTTGACGAATAAATCAACAGTTGTGCAAGATAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS TCA 72 bp | GTGTCCTGGCGCACCTCACAGTTAGAAGCCACTTCCTaGGGGTCTTCTCCTGCCAGAACAACTTCTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSWRTSQLEATS*GSSPARTTSAE Trigger: CTCAGCAGAAGTTGTTCTGGCAGGAGAAGACCCTCAGGAAGTGGCTTCTAACTGTGAGGTGCGCCAGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 90 bp | CTTCCTCGGGAGCCCCAGGGCCCTGGAAGACTGCCAGCATGTTCCTaGTTCATCAGTCTTATGTCTTGCAAATGGCAGAAAGAGTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPREPQGPGRLPACS*FISLMSCKWQKESC Trigger: ACAGGACTCTTTCTGCCATTTGCAAGACATAAGACTGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCCCTGGGGCTCCCGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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| CDS TCA 72 bp | CTGGAAACTGGTAGTGCACTTGAGCCTGGCTGTATCTaGGCCAGTCGCCTGAATTTGCTTTGTCTGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LETGSALEPGCI*ASRLNLLCLAA Trigger: AGCTGCCAGACAAAGCAAATTCAGGCGACTGGCTCAGATACAGCCAGGCTCAAGTGCACTACCAGTTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS TCA 72 bp | GGACCTTTAGTCCTGGTTAGAAAGCTTGGATCTTCCTaGTGGGTGCTCTTCCCAGCAGCCACTGCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPLVLVRKLGSS*WVLFPAATASS Trigger: AGAAGAAGCAGTGGCTGCTGGGAAGAGCACCCATCAGGAAGATCCAAGCTTTCTAACCAGGACTAAAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS GCA 72 bp | TGGCAGGTGTGTGTGGCAGGCTGCACCTGTATTTGTTaGGAAGGTTCAGGAAATTTCCATTTCTGCTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: WQVCVAGCTCIC*EGSGNFHFCSG Trigger: ACCGGAGCAGAAATGGAAATTTCCTGAACCTTCGCAACAAATACAGGTGCAGCCTGCCACACACACCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 72 bp | TTGGCAGGTGTGTGTGGCAGGCTGCACCTGTATTTGTaGCGAAGGTTCAGGAAATTTCCATTTCTGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LAGVCGRLHLYL*RRFRKFPFLLR Trigger: CCGGAGCAGAAATGGAAATTTCCTGAACCTTCGCAACAAATACAGGTGCAGCCTGCCACACACACCTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 72 bp | GCAACATTTCTCAGGTTCAAGTCCTGTGAGAGGTTCTaGGCAGGTGTGTGTGGCAGGCTGCACCTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATFLRFKSCERF*AGVCGRLHLYL Trigger: CAAATACAGGTGCAGCCTGCCACACACACCTGCCAAGAACCTCTCACAGGACTTGAACCTGAGAAATGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 72 bp | GAGCCCCAGGGCCCTGGAAGACTGCCAGCATGTTCCTaGTTCATCAGTCTTATGTCTTGCAAATGGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EPQGPGRLPACS*FISLMSCKWQK Trigger: TTTCTGCCATTTGCAAGACATAAGACTGATGAACAAGGAACATGCTGGCAGTCTTCCAGGGCCCTGGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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| CDS CAA 90 bp | GCTCTCCGGAGAGATGATGGAGTAAAATATCTGAGACGTGGGACTTaGAGGTATCTTCTTTATCAGCTGGAACAGGAGAAGCCAGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALRRDDGVKYLRRGT*RYLLYQLEQEKPGR Trigger: GCGCCCTGGCTTCTCCTGTTCCAGCTGATAAAGAAGATACCTCAAAGTCCCACGTCTCAGATATTTTACTCCATCATCTCTCCGGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS TCA 72 bp | GCACCTGGACCCCTGAAGAATTGCTCTCCGGAGAGATaGTGGAGTAAAATATCTGAGACGTGGGACTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: APGPLKNCSPER*WSKISETWDFE Trigger: CTCAAAGTCCCACGTCTCAGATATTTTACTCCATCATCTCTCCGGAGAGCAATTCTTCAGGGGTCCAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS GCA 72 bp | CTGCTTCTTCTAAGGGAGAGGCGTTTTCTTCTTCTGTaGCAGGGGAGCAACAGGGCTTGCTGCTATTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLLRERRFLLL*QGSNRACCYLL Trigger: CAATAAATAGCAGCAAGCCCTGTTGCTCCCCTGGCACAGAAGAAGAAAACGCCTCTCCCTTAGAAGAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CCA 72 bp | CAACATTTCTCAGGTTCAAGTCCTGTGAGAGGTTCTTaGCAGGTGTGTGTGGCAGGCTGCACCTGTATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QHFSGSSPVRGS*QVCVAGCTCIC Trigger: ACAAATACAGGTGCAGCCTGCCACACACACCTGCCAAGAACCTCTCACAGGACTTGAACCTGAGAAATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 90 bp | GTCAACCTCGGAGAATGGCCGCCTTCGTTAGCTGTGGTAAGTGGTTaGCTAGAGAGTTTCCCTTTGGGAGAAACCTTAGGAAAATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VNLGEWPPSLAVVSG*LESFPLGETLGKSG Trigger: TCCAGATTTTCCTAAGGTTTCTCCCAAAGGGAAACTCTCTAGCAAACCACTTACCACAGCTAACGAAGGCGGCCATTCTCCGAGGTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 90 bp | CAAATTCAAGCAACATTTCTCAGGTTCAAGTCCTGTGAGAGGTTCTaGGCAGGTGTGTGTGGCAGGCTGCACCTGTATTTGTTGCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QIQATFLRFKSCERF*AGVCGRLHLYLLRR Trigger: CCTTCGCAACAAATACAGGTGCAGCCTGCCACACACACCTGCCAAGAACCTCTCACAGGACTTGAACCTGAGAAATGTTGCTTGAATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CCA 72 bp | GAGCAACAGGGCTTGCTGCTATTTATTGAACCATTTTaGGGACTGGGCTGGCCAGTGAATTCTGGGATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: EQQGLLLFIEPF*GLGWPVNSGIC Trigger: ACAAATCCCAGAATTCACTGGCCAGCCCAGTCCCCAAAATGGTTCAATAAATAGCAGCAAGCCCTGTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CCA 72 bp | TCCATTTCTTCCATGTTATCACTGGGACATAAGGACTaGATTCTAGGAATTCCCAGGCAGCAGAGGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SISSMLSLGHKD*ILGIPRQQRWG Trigger: ACCCCACCTCTGCTGCCTGGGAATTCCTAGAATCCAGTCCTTATGTCCCAGTGATAACATGGAAGAAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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| CDS CAA 72 bp | TTCTTGGCAGGTGTGTGTGGCAGGCTGCACCTGTATTaGTTGCGAAGGTTCAGGAAATTTCCATTTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLAGVCGRLHLY*LRRFRKFPFLL Trigger: GAGCAGAAATGGAAATTTCCTGAACCTTCGCAACAAATACAGGTGCAGCCTGCCACACACACCTGCCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS TCA 72 bp | TTCCTGAGGGTCTTCTCCTGCCAGAACAACTTCTGCTaGGACAGGAGAGGTGTCATTTGTTATGGTAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLRVFSCQNNFC*DRRGVICYGKV Trigger: AACTTTACCATAACAAATGACACCTCTCCTGTCTCAGCAGAAGTTGTTCTGGCAGGAGAAGACCCTCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
||
| CDS GCA 72 bp | TCTTTATCAGCTGGAACAGGAGAAGCCAGGGCGCATTaGTTATCTTTATCATGCCTATTGCCGACAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSAGTGEARAH*LSLSCLLPTSS Trigger: TGAACTTGTCGGCAATAGGCATGATAAAGATAAGCAATGCGCCCTGGCTTCTCCTGTTCCAGCTGATAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
||
| CDS GCA 72 bp | ACACGATTTGACCCAGACGTGGTTCCTAAATTATCTTaGACAACTGTTGATTTATTCGTCAACCTCGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TRFDPDVVPKLS*TTVDLFVNLGE Trigger: TTCTCCGAGGTTGACGAATAAATCAACAGTTGTGCAAGATAATTTAGGAACCACGTCTGGGTCAAATCGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS GCA 72 bp | TGTATTTGTTGCGAAGGTTCAGGAAATTTCCATTTCTaGTCCGGTTGTTTTTCAACACGATTTGACCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CICCEGSGNFHF*SGCFSTRFDPD Trigger: GTCTGGGTCAAATCGTGTTGAAAAACAACCGGAGCAGAAATGGAAATTTCCTGAACCTTCGCAACAAATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 72 bp | AGAGATGATGGAGTAAAATATCTGAGACGTGGGACTTaGAGGTATCTTCTTTATCAGCTGGAACAGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RDDGVKYLRRGT*RYLLYQLEQEK Trigger: CTTCTCCTGTTCCAGCTGATAAAGAAGATACCTCAAAGTCCCACGTCTCAGATATTTTACTCCATCATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
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| CDS CAA 72 bp | CGGGTTCTGAGTTCACTCTCCAGGACCAGATCCATTTaGCTTTTGACCAAGAAGATGCAGAGATTTTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RVLSSLSRTRSI*LLTKKMQRFYF Trigger: AAAATAAAATCTCTGCATCTTCTTGGTCAAAAGCAAAATGGATCTGGTCCTGGAGAGTGAACTCAGAACCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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| CDS CAA 90 bp | GTTCAGGAAATTTCCATTTCTGCTCCGGTTGTTTTTCAACACGATTaGACCCAGACGTGGTTCCTAAATTATCTTGCACAACTGTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: VQEISISAPVVFQHD*TQTWFLNYLAQLLI Trigger: AATCAACAGTTGTGCAAGATAATTTAGGAACCACGTCTGGGTCAAATCGTGTTGAAAAACAACCGGAGCAGAAATGGAAATTTCCTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
||
| CDS CAA 72 bp | ATTTCCATTTCTGCTCCGGTTGTTTTTCAACACGATTaGACCCAGACGTGGTTCCTAAATTATCTTGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: ISISAPVVFQHD*TQTWFLNYLAQ Trigger: TTGTGCAAGATAATTTAGGAACCACGTCTGGGTCAAATCGTGTTGAAAAACAACCGGAGCAGAAATGGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123556.8 ENSMUST00000133931.9 |
||
| CDS CAA 72 bp | ACTGCCAGCATGTTCCTTGTTCATCAGTCTTATGTCTaGCAAATGGCAGAAAGAGTCCTGTTTTATTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TASMFLVHQSYV*QMAERVLFYSF Trigger: AAAAGAATAAAACAGGACTCTTTCTGCCATTTGCAAGACATAAGACTGATGAACAAGGAACATGCTGGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133931.9 |
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