RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024045

Ensembl transcript IDs: ENSMUST00000002699.7, ENSMUST00000235360.2, ENSMUST00000235702.2, ENSMUST00000235764.2, ENSMUST00000236267.2, ENSMUST00000236580.2, ENSMUST00000236954.2, ENSMUST00000237381.2, ENSMUST00000237860.2

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGGTGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTCAAAAGGACGTGTGGGACTTTTGGC +
Preference number: 1 (lower is better)
Translates to: PGASPETVPRRWRPA*AAQKPLKRTCGTFG
Trigger: GCCAAAAGTCCCACACGTCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR GCA 90 bp TGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAGGACGTGTGGGACTTTTGGCAAGAG +
Preference number: 1 (lower is better)
Translates to: CQSRDCPTKMATGVR*SEASQKDVWDFWQE
Trigger: CTCTTGCCAAAAGTCCCACACGTCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR GCA 90 bp GAGGAGCCTGCAGGAAAGCTCAGCTCCAGGGGCCAAGTTGGATGCTaGAGCCTGGCAGCCACACCCTGTGCCCAGCTTCCATTACATTTG +
Preference number: 1 (lower is better)
Translates to: EEPAGKLSSRGQVGC*SLAATPCAQLPLHL
Trigger: CAAATGTAATGGAAGCTGGGCACAGGGTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCTTTCCTGCAGGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR TCA 90 bp ACCAGGATGAGAACCCAGAGGAGTTGCCTCACTCCTCCCATGGCCTaGTGGGCAGAGGCCCATCCCACTCATGGCCACCTACTCTGTTCT +
Preference number: 1 (lower is better)
Translates to: TRMRTQRSCLTPPMA*WAEAHPTHGHLLCS
Trigger: AGAACAGAGTAGGTGGCCATGAGTGGGATGGGCCTCTGCCCATCAGGCCATGGGAGGAGTGAGGCAACTCCTCTGGGTTCTCATCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 90 bp TCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGTCACTATaGGCTGCAGCAGGTTCTCCTTCCCCCTCTACAGCCTTCACTGCT +
Preference number: 1 (lower is better)
Translates to: SAVSTGPSTSVRTSL*AAAGSPSPSTAFTA
Trigger: AGCAGTGAAGGCTGTAGAGGGGGAAGGAGAACCTGCTGCAGCGCATAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR CCA 90 bp CACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCTaGCCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGT +
Preference number: 1 (lower is better)
Translates to: HRSALLVAFQCGGHC*PLLCPQALPLQLGR
Trigger: ACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR CCA 90 bp TCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTaGGGGTCACTGCTGGCCTCTGCTGTGTCCACAGGCCCTTCCACT +
Preference number: 1 (lower is better)
Translates to: SDAASQVCSSSSFSV*GSLLASAVSTGPST
Trigger: AGTGGAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR GCA 90 bp CTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTaGTGGCCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGA +
Preference number: 1 (lower is better)
Translates to: LHRSALLVAFQCGGH*WPLLCPQALPLQLG
Trigger: TCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR GCA 90 bp GTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTaGTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: VLSSMLLVSDAASQV*SSSSFSVWGSLLAS
Trigger: AGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR GCA 90 bp CTTCGTTTCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATaGTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTA +
Preference number: 1 (lower is better)
Translates to: LRFWPQQPHLWSCLR*SWFQMLLHRSALLV
Trigger: TACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGAAACGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR TCA 90 bp GTGACTGTCTTGCTGGCTTCATCTGAACTAGGGACTCAGCAGGTCTaGCAGTCCTTGCTGGCCCAATCTCTAGTTTCCACTCACAAAACC +
Preference number: 1 (lower is better)
Translates to: VTVLLASSELGTQQV*QSLLAQSLVSTHKT
Trigger: GGTTTTGTGAGTGGAAACTAGAGATTGGGCCAGCAAGGACTGTCAGACCTGCTGAGTCCCTAGTTCAGATGAAGCCAGCAAGACAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CCA 90 bp CATCGTTTTCAGACAGATCTCCGTCACTGTCAGCACGGGCCAGTTTaGCATCAGGTTCTTCATACAATGGAAACTGCTTCCGCTTCCTGC +
Preference number: 1 (lower is better)
Translates to: HRFQTDLRHCQHGPV*HQVLHTMETASASC
Trigger: GCAGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGACAGTGACGGAGATCTGTCTGAAAACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR TCA 90 bp GCCTCTCAAAAGGACGTGTGGGACTTTTGGCAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTAATAGCAAAGTCATCCCGGTTGGGT +
Preference number: 1 (lower is better)
Translates to: ASQKDVWDFWQEVTA*NYDCCLIAKSSRLG
Trigger: ACCCAACCGGGATGACTTTGCTATTAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTGCCAAAAGTCCCACACGTCCTTTTGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR TCA 90 bp TTCACTCTAGAGGCCCAGGTAGGCATGCTTCCTATGGAACAGCTCTaGCAATCTTATACACAGGCCAAGGTCACCATCTTGTTATGCCTT +
Preference number: 1 (lower is better)
Translates to: FTLEAQVGMLPMEQL*QSYTQAKVTILLCL
Trigger: AAGGCATAACAAGATGGTGACCTTGGCCTGTGTATAAGATTGTCAGAGCTGTTCCATAGGAAGCATGCCTACCTGGGCCTCTAGAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR CCA 90 bp ACTCTGTTCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTaGCTCTTCTCCCACATCACTCAAAGAGCTGCAAATATCCCCAAC +
Preference number: 1 (lower is better)
Translates to: TLFCPRLLSNISLCC*LFSHITQRAANIPN
Trigger: GTTGGGGATATTTGCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp AGGGAAGGAGGTGGCCTGCTGGTGGAGGGCCCACCGAGACCACGGCCACCCATGAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: REGGGLLVEGPPRPRPPMRWRPA*AAQKPL
Trigger: GAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCT...CATGGGTGGCCGTGGTCTCGGTGGGCCCTCCACCAGCAGGCCACCTCCTTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR-3UTR CCA 90 bp AAAGCTCAGCTCCAGGGGCCAAGTTGGATGCTGCAGCCTGGCAGCCACACCCTGGAGGTGGCCTGCTGGTaGAGGGCCCACCGAGACCAC +
Preference number: 2 (lower is better)
Translates to: KAQLQGPSWMLQPGSHTLEVACW*RAHRDH
Trigger: GTGGTCTCGGTGGGCCCTCCACCAGCAGGCCACCTC...CAGGGTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR-3UTR GCA 90 bp GTGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGACCTTTTCTCCCCTGGTaGCAGTCCCGAGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: VPVPRLSHEDGDRRALLRPFLPW*QSRDCP
Trigger: GGGACAGTCTCGGGACTGGCACCAGGGGAGAAAAGG...TCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236267.2
3UTR-3UTR TCA 90 bp CTGCTGGCCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGTCACTAACTCCTCCCATGGCCTaGTGGGCAGAGGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: LLASAVSTGPSTSVRTSLTPPMA*WAEAHP
Trigger: GGGATGGGCCTCTGCCCATCAGGCCATGGGAGGAGT...TAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGGCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CAGGAAAGCTCAGCTCCAGGGGCCAAGTTGGATGCTGCAGCCTGGCAGCCACACGGCAGCTACCTCCTCTaGTGTCTCCTCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: QESSAPGAKLDAAAWQPHGSYLL*CLLLLL
Trigger: GAGGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCC...GTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CAGAACAGGCAAACTGAATCCTGTCAGCTGCTCGGTCCCGCATCCTGTCTCTCCACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: QNRQTESCQLLGPASCLSTVPRR*RPACAA
Trigger: AGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGT...GGAGAGACAGGATGCGGGACCGAGCAGCTGACAGGATTCAGTTTGCCTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GGGGCACAATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACGAAGAGGGAAGGAGGTaGCCTGCTGGTGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: GAQSELSHTWMVESCVSHEEGRR*PAGGGP
Trigger: GGGCCCTCCACCAGCAGGCCACCTCCTTCCCTCTTC...GTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR-3UTR GCA 90 bp CCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGTCACTATGCGCTGGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: PLLCPQALPLQLGRHYALATGVR*SEASQK
Trigger: CTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGC...CAGCGCATAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGGCCTCAAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: GNVLPASAVGIAASFLASRWRPA*AAQKPL
Trigger: GAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCT...TGAGGCCAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCCGCCCACCCCCTGCATaGCCATCATGCTGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: AAVITSAKTSAATSSGVSRPPPA*PSCCSQ
Trigger: CTGACTACAGCATGATGGGCATGCAGGGGGTGGGCG...GGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR GCA 90 bp TGCCTTCGGCAGTGTCTTCACTCTAGAGGCCCAGGTAGGCATGCTTCCTATGGAGGCCAAGTTGGATGCTaGAGCCTGGCAGCCACACCC +
Preference number: 2 (lower is better)
Translates to: CLRQCLHSRGPGRHASYGGQVGC*SLAATP
Trigger: GGGTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCC...TCCATAGGAAGCATGCCTACCTGGGCCTCTAGAGTGAAGACACTGCCGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLTVPRR*RPACAA
Trigger: AGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGT...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCTGGCCCTCCAGGGGCCAAGTTaGATGCTGCAGCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: ASQVCSSSSFSVWGSLLALQGPS*MLQPGS
Trigger: GCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAG...GGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GTGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGACAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: VPVPRLSHEDGDRRALLRQEVTA*NYDCCL
Trigger: TAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTG...TCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGGTCCCCTCGAGACACTaGGGAGCCTGCAGGAAAGCT +
Preference number: 2 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLVPSRH*GACRKA
Trigger: AGCTTTCCTGCAGGCTCCTCAGTGTCTCGAGGGGAC...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGGGCCAAGTTGGATGCTaGAGCCTGGCAGCCACACCC +
Preference number: 2 (lower is better)
Translates to: LLSSQPSIMVMVHGMQMPGQVGC*SLAATP
Trigger: GGGTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCC...CGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: AANLRLWLWSTECRCRWRTVPRR*RPACAA
Trigger: AGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGT...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGTGGGGGTCACTGCTaGCCTCTGCTGTGTCCACAG +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRCGGHC*PLLCPQ
Trigger: CTGTGGACACAGCAGAGGCCAGCAGTGACCCCCACA...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAAGCTGATGGAAGAGGGAAGGAGGTaGCCTGCTGGTGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: PSIMVMVHGMQMPLEKLMEEGRR*PAGGGP
Trigger: GGGCCCTCCACCAGCAGGCCACCTCCTTCCCTCTTC...CATCAGCTTCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp GGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGGCCTCACCCAGGAGAGGCCTGTaGCCAGCATCTCAGCATGAG +
Preference number: 2 (lower is better)
Translates to: GNVLPASAVGIAASFLASPRRGL*PASQHE
Trigger: CTCATGCTGAGATGCTGGCCACAGGCCTCTCCTGGG...TGAGGCCAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCAGTGTGGGGGTCACTaGTGGCCTCTGCTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: LLSSQPSIMVMVHGMQMPQCGGH*WPLLCP
Trigger: TGGACACAGCAGAGGCCAGCAGTGACCCCCACACTG...CGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCCTTCACTGCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTCCTGCATGCCCATCATaGTGTAGTCAGGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: AFTAAVITSAKTSAATSSPACPS*CSQGPW
Trigger: CCATGGCCCCTGACTACAGCATGATGGGCATGCAGG...AGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp TGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGGGCAGCTACCTCCTCTaGTGTCTCCTCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: WPQQPHLWSCLRCSWFQMGSYLL*CLLLLL
Trigger: GAGGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCC...CATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGTCACTATGCGCTGTTATGGTCCACGGAATaGAGATGCCGCTGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: PLLCPQALPLQLGRHYALLWSTE*RCRWRS
Trigger: GCTTCTCCAGCGGCATCTGCATTCCGTGGACCATAA...CAGCGCATAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGGTCACTGCTGGCCTCTaGTGTGTCCACAGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: DAASQVCSSSSFSVWGSLVTAGL*CVHRPF
Trigger: GAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGAC...CAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCAGTGTGGGGGTCACTaGTGGCCTCTGCTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: DAASQVCSSSSFSVWGSLQCGGH*WPLLCP
Trigger: TGGACACAGCAGAGGCCAGCAGTGACCCCCACACTG...CAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGGCCTCACGTGCTTCCTGCGTCTaGTGTTGGCATAGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: GNVLPASAVGIAASFLASRASCV*CWHSCF
Trigger: GAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACG...TGAGGCCAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GATGCTGCAGCCTGGCAGCCACACCCTGTGCCCAGCTTCCATTACATTTGTGGTACTGCTTCCGCTTCCTaGCCATGTTGTCTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: DAAAWQPHPVPSFHYICGTASAS*PCCLVQ
Trigger: TTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGT...ACCACAAATGTAATGGAAGCTGGGCACAGGGTGTGGCTGCCAGGCTGCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR-3UTR GCA 90 bp CAGGAAAGCTCAGCTCCAGGGGCCAAGTTGGATGCTGCAGCCTGGCAGCCACACCATCACTCAAAGAGCTaGAAATATCCCCAACAGAGG +
Preference number: 2 (lower is better)
Translates to: QESSAPGAKLDAAAWQPHHHSKS*KYPQQR
Trigger: CCTCTGTTGGGGATATTTGCAGCTCTTTGAGTGATG...GTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp ATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTTCTCCCAGCAGCCTCACCTCTaGTCTTGTCTTCGATGCTCC +
Preference number: 2 (lower is better)
Translates to: ITSAKTSAATSSGVSSFSQQPHL*SCLRCS
Trigger: GGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTG...GGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCCCTGCCCATGTTGTCTaGTCCAAAGCGTTCAAACCC +
Preference number: 2 (lower is better)
Translates to: AAVITSAKTSAATSSGVSPAHVV*SKAFKP
Trigger: GGGTTTGAACGCTTTGGACCAGACAACATGGGCAGG...GGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR TCA 90 bp GCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCCCTTCACTGCTGCTGTaGTCACCTCTGCTAAGACTT +
Preference number: 2 (lower is better)
Translates to: AAVITSAKTSAATSSGVSPSLLL*SPLLRL
Trigger: AAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGG...GGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCGGTTGGATAAGCATCTaGACTGTAACCCCTACCCCT +
Preference number: 2 (lower is better)
Translates to: AVITSAKTSAATSSGVSSGWISI*TVTPTP
Trigger: AGGGGTAGGGGTTACAGTTCAGATGCTTATCCAACC...GGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp ATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAACTCCTCCCATGGCCTaGTGGGCAGAGGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: MLLYRHAEPPFLRLRTAKTPPMA*WAEAHP
Trigger: GGGATGGGCCTCTGCCCATCAGGCCATGGGAGGAGT...TTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CCCGGGATTGCTATGACAGGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTTTATGGTCCACGGAATaGAGATGCCGCTGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: PGIAMTGNVLPASAVGIALWSTE*RCRWRS
Trigger: GCTTCTCCAGCGGCATCTGCATTCCGTGGACCATAA...AGCTATGCCAACAGCAGACGCAGGAAGCACGTTACCTGTCATAGCAATCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp ATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTTCTCCCTCTACAGCCTTCACTaGTGCTGTGATCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: ITSAKTSAATSSGVSSFSLYSLH*CCDHLC
Trigger: GCAGAGGTGATCACAGCAGCAGTGAAGGCTGTAGAG...GGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTCTCTACAGCCTTCACTaGTGCTGTGATCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: ASAASPLVLSSMLLVSDALYSLH*CCDHLC
Trigger: GCAGAGGTGATCACAGCAGCAGTGAAGGCTGTAGAG...AGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CTCCCATGGCCTGATGGGCAGAGGCCCATCCCACTCATGGCCACCTACTCTGTTGCTGCTTCACAGGTCTaGTCTTCTAGTAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: LPWPDGQRPIPLMATYSVAASQV*SSSSFS
Trigger: TGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGC...AACAGAGTAGGTGGCCATGAGTGGGATGGGCCTCTGCCCATCAGGCCATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCTGGCCGCTCCTGGTTTCAGATaGTGCTTCACAGGTCTGCTC +
Preference number: 2 (lower is better)
Translates to: ASQVCSSSSFSVWGSLLAAPGFR*CFTGLL
Trigger: GAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGC...GGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGGCCTCATGCTGTTGGCATAGCTaGTTCGTTTCTGGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: GNVLPASAVGIAASFLASCCWHS*FVSGLS
Trigger: GCTGAGGCCAGAAACGAAGCAGCTATGCCAACAGCA...TGAGGCCAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGAACTGCTTCCGCTTCCTaGCCATGTTGTCTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRTASAS*PCCLVQ
Trigger: TTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGT...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR GCA 90 bp TCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCAACCCCTACCCCTGGTaGCAGTCCCGAGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: SFGGNIFGLCTSLFQLIFNPYPW*QSRDCP
Trigger: GGGACAGTCTCGGGACTGGCACCAGGGGTAGGGGTT...GAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CAGGAAAGCTCAGCTCCAGGGGCCAAGTTGGATGCTGCAGCCTGGCAGCCACACACATTGGGAAGGAAATaGCCCAATCTTTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: QESSAPGAKLDAAAWQPHTLGRK*PNLSTK
Trigger: TTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGT...GTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp ACTGCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCAGTAGCTTTTCAGTGTaGGGGTCACTGCTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: TAAVITSAKTSAATSSGVSSFSV*GSLLAS
Trigger: AGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACT...GACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGGCCTCAGGAGACTTGTTTTCTTaGACTGCTCAGCAGCCAACC +
Preference number: 2 (lower is better)
Translates to: GNVLPASAVGIAASFLASGDLFS*TAQQPT
Trigger: GGTTGGCTGCTGAGCAGTTCAAGAAAACAAGTCTCC...TGAGGCCAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CCCGGGATTGCTATGACAGGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGGTTGGATAAGCATCTaGACTGTAACCCCTACCCCT +
Preference number: 2 (lower is better)
Translates to: PGIAMTGNVLPASAVGIAGWISI*TVTPTP
Trigger: AGGGGTAGGGGTTACAGTTCAGATGCTTATCCAACC...AGCTATGCCAACAGCAGACGCAGGAAGCACGTTACCTGTCATAGCAATCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTACCAGAGCCCCAGGCTaGGGGTCAAGGCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: VGISLASAPVCSSSSSMITRAPG*GSRLDA
Trigger: AGCATCCAGCCTTGACCCTCAGCCTGGGGCTCTGGT...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTGGGACTCAGCAGGTCTaGCAGTCCTTGCTGGCCCAA +
Preference number: 2 (lower is better)
Translates to: LSSMLLVSDAASQVCSSSGTQQV*QSLLAQ
Trigger: TTGGGCCAGCAAGGACTGTCAGACCTGCTGAGTCCC...ACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCGGGACTCAGCAGGTCTaGCAGTCCTTGCTGGCCCAA +
Preference number: 2 (lower is better)
Translates to: SFGGNIFGLCTSLFQLIFGTQQV*QSLLAQ
Trigger: TTGGGCCAGCAAGGACTGTCAGACCTGCTGAGTCCC...GAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGTCACTATGCGCTGAACAGAGAGAACGAATaGCTTCGGCAGTGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: PLLCPQALPLQLGRHYALNRENE*LRQCLH
Trigger: GTGAAGACACTGCCGAAGGCATTCGTTCTCTCTGTT...CAGCGCATAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGAATACTAAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: YRHAEPPFLRLRTAKGILRWRPA*AAQKPL
Trigger: GAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCT...TAGTATTCCTTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGCCTGGTTTCAGATGCTaGTTCACAGGTCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLPGFRC*FTGLLF
Trigger: GAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGG...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCTGGCCCCTGGTTTCAGATGCTaGTTCACAGGTCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: ASQVCSSSSFSVWGSLLAPGFRC*FTGLLF
Trigger: GAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGG...GGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGAGAGCTCTCGCACACATaGATGGTTGAATCGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRELSHT*MVESCV
Trigger: CACACACGATTCAACCATCCATGTGTGCGAGAGCTC...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCTCAAAAGGACGTGTaGGACTTTTGGCAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: AAVITSAKTSAATSSGVSSQKDV*DFWQEV
Trigger: GACCTCTTGCCAAAAGTCCCACACGTCCTTTTGAGA...GGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGGCAGCTACCTCCTCTaGTGTCTCCTCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SELSHTWMVESCVSHINHGSYLL*CLLLLL
Trigger: GAGGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCC...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCATGTAGTCAGGGGCCATaGACTGGGAGAAGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: ELSHTWMVESCVSHINHACSQGP*TGRRGK
Trigger: CTTCCCTCTTCTCCCAGTCCATGGCCCCTGACTACA...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR-3UTR CCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGAGCTGTTAGAGGTTCCTaGTGTACCAGGATGAGAACC +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRAVRGS*CTRMRT
Trigger: GGTTCTCATCCTGGTACACCAGGAACCTCTAACAGC...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGGGTCAGCAGTTTCATTaGCAAAAGGATCCTCACCCT +
Preference number: 2 (lower is better)
Translates to: WPQQPHLWSCLRCSWFQMGQQFH*QKDPHP
Trigger: AGGGTGAGGATCCTTTTGTCAATGAAACTGCTGACC...CATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp ATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTTCTCCGGTCAGCAGTTTCATTaGCAAAAGGATCCTCACCCT +
Preference number: 2 (lower is better)
Translates to: ITSAKTSAATSSGVSSFSGQQFH*QKDPHP
Trigger: AGGGTGAGGATCCTTTTGTCAATGAAACTGCTGACC...GGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTGGCTCTTCTCCCACAGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: SVPGCCPIYHFVVGSSPTATGVR*SEASQK
Trigger: CTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGC...TGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTCAGTGTGGGGGTCACTaGTGGCCTCTGCTGTGTCCA +
Preference number: 2 (lower is better)
Translates to: VGISLASAPVCSSSSSMIQCGGH*WPLLCP
Trigger: TGGACACAGCAGAGGCCAGCAGTGACCCCCACACTG...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp ATGACAGGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGTGCTGTTGGCATAGCTaGTTCGTTTCTGGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: MTGNVLPASAVGIAASFLCCWHS*FVSGLS
Trigger: GCTGAGGCCAGAAACGAAGCAGCTATGCCAACAGCA...CAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACCTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATCGTGCTTCCTGCGTCTaGTGTTGGCATAGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SELSHTWMVESCVSHINHRASCV*CWHSCF
Trigger: GAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACG...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCTGTTAGAGGTTCCTGGTGTACCAGGATGAGAACCCAGAGGAGTTGCCTCACTTATAACAAGCTGCAGTaGCACCCTCCATCCCATGTC +
Preference number: 2 (lower is better)
Translates to: AVRGSWCTRMRTQRSCLTYNKLQ*HPPSHV
Trigger: GACATGGGATGGAGGGTGGCACTGCAGCTTGTTATA...AGTGAGGCAACTCCTCTGGGTTCTCATCCTGGTACACCAGGAACCTCTAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTGGCTCTTCTCCCACAAGGGGCCAAGTTGGATaGTGCAGCCTGGCAGCCACA +
Preference number: 2 (lower is better)
Translates to: SVPGCCPIYHFVVGSSPTRGQVG*CSLAAT
Trigger: TGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCT...TGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAGAGCTCTCGCACACATaGATGGTTGAATCGTGTGTG +
Preference number: 2 (lower is better)
Translates to: AANLRLWLWSTECRCRWRELSHT*MVESCV
Trigger: CACACACGATTCAACCATCCATGTGTGCGAGAGCTC...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTCCTCCTTTTCTCCCCTaGTGCCAGTCCCGAGACTGT +
Preference number: 2 (lower is better)
Translates to: LSSMLLVSDAASQVCSSSPPFLP*CQSRDC
Trigger: ACAGTCTCGGGACTGGCACCAGGGGAGAAAAGGAGG...ACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236267.2
3UTR-3UTR CCA 90 bp AAATCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTGTGGGGGTCACTGCTaGCCTCTGCTGTGTCCACAG +
Preference number: 2 (lower is better)
Translates to: KSFGGNIFGLCTSLFQLICGGHC*PLLCPQ
Trigger: CTGTGGACACAGCAGAGGCCAGCAGTGACCCCCACA...GATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp ATGACAGGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGCCTGCCCATGTTGTCTaGTCCAAAGCGTTCAAACCC +
Preference number: 2 (lower is better)
Translates to: MTGNVLPASAVGIAASFLPAHVV*SKAFKP
Trigger: GGGTTTGAACGCTTTGGACCAGACAACATGGGCAGG...CAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACCTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp CTTGTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGCCCAGGAGAGGCCTGTaGCCAGCATCTCAGCATGAG +
Preference number: 2 (lower is better)
Translates to: LVFLNCSAANLRLWLWSTPRRGL*PASQHE
Trigger: CTCATGCTGAGATGCTGGCCACAGGCCTCTCCTGGG...CGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp ATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTTCTCCCAAAACCAACATCCTTaGACTTTCCCAAGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: ITSAKTSAATSSGVSSFSQNQHP*TFPRPG
Trigger: ACCTGGCCTTGGGAAAGTCCAAGGATGTTGGTTTTG...GGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 90 bp TCAGGTTCTTCATACAATGGAAACTGCTTCCGCTTCCTGCCCATGTaGTCTGGTCCAAAGCGTTCAAACCCCCTCCTTCTAGGCCAATCC +
Preference number: 2 (lower is better)
Translates to: SGSSYNGNCFRFLPM*SGPKRSNPLLLGQS
Trigger: GGATTGGCCTAGAAGGAGGGGGTTTGAACGCTTTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR TCA 90 bp GCTGTTAGAGGTTCCTGGTGTACCAGGATGAGAACCCAGAGGAGTTGCCTCACTCTGATTAGCAAGCACTaGACAGAGAGAACGAATGCC +
Preference number: 2 (lower is better)
Translates to: AVRGSWCTRMRTQRSCLTLISKH*TERTNA
Trigger: GGCATTCGTTCTCTCTGTTCAGTGCTTGCTAATCAG...AGTGAGGCAACTCCTCTGGGTTCTCATCCTGGTACACCAGGAACCTCTAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCACCTGGCCAATGCCTTTaGATGGATCTGGTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: ELSHTWMVESCVSHINHAPGQCL*MDLVWV
Trigger: AACCCAAACCAGATCCATTCAAAGGCATTGGCCAGG...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GTCTCAGGAAATATAACAAGCTGCAGTGCCACCCTCCATCCCATGTCTAGGTGGCCTGGCCAATGCCTTTaGATGGATCTGGTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: VSGNITSCSATLHPMSRWPGQCL*MDLVWV
Trigger: AACCCAAACCAGATCCATTCAAAGGCATTGGCCAGG...CCACCTAGACATGGGATGGAGGGTGGCACTGCAGCTTGTTATATTTCCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGAAGGATCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLKDPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTT...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GTCTCAGGAAATATAACAAGCTGCAGTGCCACCCTCCATCCCATGTCTAGGTGGCCTTCACTGCTGCTGTaGTCACCTCTGCTAAGACTT +
Preference number: 2 (lower is better)
Translates to: VSGNITSCSATLHPMSRWPSLLL*SPLLRL
Trigger: AAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGG...CCACCTAGACATGGGATGGAGGGTGGCACTGCAGCTTGTTATATTTCCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTACCAGAGCCCCAGGCTaGGGGTCAAGGCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLTRAPG*GSRLDA
Trigger: AGCATCCAGCCTTGACCCTCAGCCTGGGGCTCTGGT...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp ATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTCCCGGGCTAGGTGGGTTGTGGTaGCTGTCTTGCTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: ISLASAPVCSSSSSMIPGLGGLW*LSCWLH
Trigger: ATGAAGCCAGCAAGACAGTCACCACAACCCACCTAG...CCCGGGAATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp ATAGCATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: IASILEVHWEGNGPIFPPATGVR*SEASQK
Trigger: CTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGC...TGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTCTTGTTTTCTTGAACTaGTCAGCAGCCAACCTTCGA +
Preference number: 2 (lower is better)
Translates to: ASAASPLVLSSMLLVSDALVFLN*SAANLR
Trigger: TCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG...AGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGAGCTGCTTCACAGGTCTaGTCTTCTAGTAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRAASQV*SSSSFS
Trigger: TGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGC...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGAATATCTTTGGCCTCTaGACCAGTTTGTTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLNIFGL*TSLFQL
Trigger: GAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATT...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp ATAGCATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAGGGGCCAAGTTGGATaGTGCAGCCTGGCAGCCACA +
Preference number: 2 (lower is better)
Translates to: IASILEVHWEGNGPIFPPRGQVG*CSLAAT
Trigger: TGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCT...TGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGCCAATGCCTTTGAATaGATCTGGTTTGGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: ASAASPLVLSSMLLVSDAANAFE*IWFGFR
Trigger: CCTAAACCCAAACCAGATCCATTCAAAGGCATTGGC...AGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CTGCTGGCCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGTCACTAAGGTTCTTCATACAATaGAAACTGCTTCCGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LLASAVSTGPSTSVRTSLRFFIQ*KLLPLP
Trigger: AGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCT...TAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGGCCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp CCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAAGCTGATGGCTGTTAGAGGTTCCTaGTGTACCAGGATGAGAACC +
Preference number: 2 (lower is better)
Translates to: PSIMVMVHGMQMPLEKLMAVRGS*CTRMRT
Trigger: GGTTCTCATCCTGGTACACCAGGAACCTCTAACAGC...CATCAGCTTCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 90 bp TCATCGTTTTCAGACAGATCTCCGTCACTGTCAGCACGGGCCAGTTaGGCATCAGGTTCTTCATACAATGGAAACTGCTTCCGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: SSFSDRSPSLSARAS*ASGSSYNGNCFRFL
Trigger: CAGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGACAGTGACGGAGATCTGTCTGAAAACGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR TCA 90 bp GCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTATAGCATCAATCCTTaGGGTACATTGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: AVITSAKTSAATSSGVSSYSINP*GTLGRK
Trigger: TTTCCTTCCCAATGTACCTCAAGGATTGATGCTATA...GGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCACCTATGGAACAGCTCTaGCAATCTTATACACAGGCC +
Preference number: 2 (lower is better)
Translates to: ELSHTWMVESCVSHINHAPMEQL*QSYTQA
Trigger: GGCCTGTGTATAAGATTGTCAGAGCTGTTCCATAGG...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CAGTGTCTTCACTCTAGAGGCCCAGGTAGGCATGCTTCCTATGGAACAGCTCTGAAGGATCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: QCLHSRGPGRHASYGTALKDPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTT...CAGAGCTGTTCCATAGGAAGCATGCCTACCTGGGCCTCTAGAGTGAAGACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTTGTTTTCTTGAACTaGTCAGCAGCCAACCTTCGA +
Preference number: 2 (lower is better)
Translates to: LLSSQPSIMVMVHGMQMPLVFLN*SAANLR
Trigger: TCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG...CGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGAATATCTTTGGCCTCTaGACCAGTTTGTTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: LLSSQPSIMVMVHGMQMPNIFGL*TSLFQL
Trigger: GAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATT...CGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGAACATTGGGAAGGAAATaGCCCAATCTTTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRTLGRK*PNLSTK
Trigger: TTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGT...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp ATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTTCTCCATTCAAAGGCAAGCTTaGTCCAAGCAAGATGCTATC +
Preference number: 2 (lower is better)
Translates to: ITSAKTSAATSSGVSSFSIQRQA*SKQDAI
Trigger: GATAGCATCTTGCTTGGACCAAGCTTGCCTTTGAAT...GGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAGCCAATGCCTTTGAATaGATCTGGTTTGGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: AANLRLWLWSTECRCRWRANAFE*IWFGFR
Trigger: CCTAAACCCAAACCAGATCCATTCAAAGGCATTGGC...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp AAAGAGCTGCAAATATCCCCAACAGAGGCAGCAGCTAGAAAGTCTCAGGAAATAGGCAGCTACCTCCTCTaGTGTCTCCTCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: KELQISPTEAAARKSQEIGSYLL*CLLLLL
Trigger: GAGGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCC...TATTTCCTGAGACTTTCTAGCTGCTGCCTCTGTTGGGGATATTTGCAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCAGTAGCTTTTCAGTGTaGGGGTCACTGCTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: SFGGNIFGLCTSLFQLIFSSFSV*GSLLAS
Trigger: AGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACT...GAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATATAGCATCAATCCTTaGGGTACATTGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRYSINP*GTLGRK
Trigger: TTTCCTTCCCAATGTACCTCAAGGATTGATGCTATA...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGTATAGCATCAATCCTTaGGGTACATTGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: WPQQPHLWSCLRCSWFQMYSINP*GTLGRK
Trigger: TTTCCTTCCCAATGTACCTCAAGGATTGATGCTATA...CATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CACTCAAAGAGCTGCAAATATCCCCAACAGAGGCAGCAGCTAGAAAGTCTCAGGCCTATGGAACAGCTCTaGCAATCTTATACACAGGCC +
Preference number: 2 (lower is better)
Translates to: HSKSCKYPQQRQQLESLRPMEQL*QSYTQA
Trigger: GGCCTGTGTATAAGATTGTCAGAGCTGTTCCATAGG...CCTGAGACTTTCTAGCTGCTGCCTCTGTTGGGGATATTTGCAGCTCTTTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAAGCTGATGCAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: PSIMVMVHGMQMPLEKLMQEVTA*NYDCCL
Trigger: TAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTG...CATCAGCTTCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTCCTGGCCAATGCCTTTaGATGGATCTGGTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: LSSMLLVSDAASQVCSSSPGQCL*MDLVWV
Trigger: AACCCAAACCAGATCCATTCAAAGGCATTGGCCAGG...ACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCCTTCACTGCTGCTGTaGTCACCTCTGCTAAGACTT +
Preference number: 2 (lower is better)
Translates to: SFGGNIFGLCTSLFQLIFPSLLL*SPLLRL
Trigger: AAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGG...GAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp AAATCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCCTAGGTGGGTTGTGGTaGCTGTCTTGCTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: KSFGGNIFGLCTSLFQLILGGLW*LSCWLH
Trigger: ATGAAGCCAGCAAGACAGTCACCACAACCCACCTAG...GATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTCCTGGTGTACCAGGATaGGAACCCAGAGGAGTTGCC +
Preference number: 2 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLPGVPG*EPRGVA
Trigger: GGCAACTCCTCTGGGTTCTCATCCTGGTACACCAGG...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGACAAAGCTACGAAACTTaGATACAGAACAGGCAAACT +
Preference number: 2 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRQSYET*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTG...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp ATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTTCTCCCAAAGCTACGAAACTTaGATACAGAACAGGCAAACT +
Preference number: 2 (lower is better)
Translates to: ITSAKTSAATSSGVSSFSQSYET*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTG...GGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp ACTGCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCATCTTTTTGAAGAAATaGTCCTGGCCAATGCCTTTG +
Preference number: 2 (lower is better)
Translates to: TAAVITSAKTSAATSSGVIFLKK*SWPMPL
Trigger: CAAAGGCATTGGCCAGGAGCATTTCTTCAAAAAGAT...GACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCATAATCTCTACAGCCTTCACTaGTGCTGTGATCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: SRTHGWLNRVCPTSTMHNLYSLH*CCDHLC
Trigger: GCAGAGGTGATCACAGCAGCAGTGAAGGCTGTAGAG...ATTATGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAATGTCACTGCTGGCCTCTaGTGTGTCCACAGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: SILEVHWEGNGPIFPPNNVTAGL*CVHRPF
Trigger: GAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGAC...ATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGAATATCTTTGGCCTCTaGACCAGTTTGTTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: DAASQVCSSSSFSVWGSLNIFGL*TSLFQL
Trigger: GAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATT...CAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAACATTGGGAAGGAAATaGCCCAATCTTTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: AANLRLWLWSTECRCRWRTLGRK*PNLSTK
Trigger: TTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGT...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CACTCAAAGAGCTGCAAATATCCCCAACAGAGGCAGCAGCTAGAAAGTCTCAGGTCTCAAAAGGACGTGTaGGACTTTTGGCAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: HSKSCKYPQQRQQLESLRSQKDV*DFWQEV
Trigger: GACCTCTTGCCAAAAGTCCCACACGTCCTTTTGAGA...CCTGAGACTTTCTAGCTGCTGCCTCTGTTGGGGATATTTGCAGCTCTTTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAAGGTTCTTCATACAATaGAAACTGCTTCCGCTTCCT +
Preference number: 2 (lower is better)
Translates to: AANLRLWLWSTECRCRWRRFFIQ*KLLPLP
Trigger: AGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCT...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp GATGTACTCCTGGAGGAATTCTACTGTCTTGTCGGGCAGTTTGGTACTTATAAATGTAACCCCTACCCCTaGTGCCAGTCCCGAGACTGT +
Preference number: 2 (lower is better)
Translates to: DVLLEEFYCLVGQFGTYKCNPYP*CQSRDC
Trigger: ACAGTCTCGGGACTGGCACCAGGGGTAGGGGTTACA...TTTATAAGTACCAAACTGCCCGACAAGACAGTAGAATTCCTCCAGGAGTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp AGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTTTGGATGCTGCAGCCTaGCAGCCACACCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: RILTLEVFFQHLHYMFVVLDAAA*QPHPVP
Trigger: GGGCACAGGGTGTGGCTGCCAGGCTGCAGCATCCAA...AACAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCCAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: SSMLLVSDAASQVCSSSSQEVTA*NYDCCL
Trigger: TAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTG...GCTACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAACCTGGCCAATGCCTTTaGATGGATCTGGTTTGGGTT +
Preference number: 2 (lower is better)
Translates to: VFLNCSAANLRLWLWSTEPGQCL*MDLVWV
Trigger: AACCCAAACCAGATCCATTCAAAGGCATTGGCCAGG...TTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp AGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTGTCACTGCTGGCCTCTaGTGTGTCCACAGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: RILTLEVFFQHLHYMFVVVTAGL*CVHRPF
Trigger: GAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGAC...AACAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TTGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCTAAAATAAAGGCCTTAAAAAACCCCTACCCCTGGTaGCAGTCCCGAGACTGTCCC +
Preference number: 2 (lower is better)
Translates to: LVQARCYLNAKAKIKALKNPYPW*QSRDCP
Trigger: GGGACAGTCTCGGGACTGGCACCAGGGGTAGGGGTT...TTTTAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TGTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGATATAACAAGCTGCAGTaGCACCCTCCATCCCATGTC +
Preference number: 2 (lower is better)
Translates to: CFLELLSSQPSIMVMVHGYNKLQ*HPPSHV
Trigger: GACATGGGATGGAGGGTGGCACTGCAGCTTGTTATA...TCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CACAGGTCTGCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCTGGCCTCTGTTTATGATGTACTCCTaGAGGAATTCTACTGTCTTG +
Preference number: 2 (lower is better)
Translates to: HRSALLVAFQCGGHCWPLFMMYS*RNSTVL
Trigger: CAAGACAGTAGAATTCCTCCAGGAGTACATCATAAA...CAGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CCAGCTCCATCATCGTTTTCAGACAGATCTCCGTCACTGTCAGCACGGGCCAGTTTTATGATGTACTCCTaGAGGAATTCTACTGTCTTG +
Preference number: 2 (lower is better)
Translates to: PAPSSFSDRSPSLSARASFMMYS*RNSTVL
Trigger: CAAGACAGTAGAATTCCTCCAGGAGTACATCATAAA...ACTGGCCCGTGCTGACAGTGACGGAGATCTGTCTGAAAACGATGATGGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCCAATGCCTTTGAATaGATCTGGTTTGGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: SELSHTWMVESCVSHINHANAFE*IWFGFR
Trigger: CCTAAACCCAAACCAGATCCATTCAAAGGCATTGGC...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTTGTAGTCAGGGGCCATaGACTGGGAGAAGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLCSQGP*TGRRGK
Trigger: CTTCCCTCTTCTCCCAGTCCATGGCCCCTGACTACA...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp GCACTGAACAGAGAGAACGAATGCCTTCGGCAGTGTCTTCACTCTAGAGGCCCAATATCACTTTGTTGTTaGCTCTTCTCCCACATCACT +
Preference number: 2 (lower is better)
Translates to: ALNRENECLRQCLHSRGPISLCC*LFSHIT
Trigger: AGTGATGTGGGAGAAGAGCCAACAACAAAGTGATAT...TGGGCCTCTAGAGTGAAGACACTGCCGAAGGCATTCGTTCTCTCTGTTCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CTCTGTTCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTGGCTCTTCTGGAGACTTGTTTTCTTaGACTGCTCAGCAGCCAACC +
Preference number: 2 (lower is better)
Translates to: LCSVPGCCPIYHFVVGSSGDLFS*TAQQPT
Trigger: GGTTGGCTGCTGAGCAGTTCAAGAAAACAAGTCTCC...AGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATACTTGCTGGCTTCATCTaGACTAGGGACTCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQILAGFI*TRDSAG
Trigger: ACCTGCTGAGTCCCTAGTTCAGATGAAGCCAGCAAG...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GATGTACTCCTGGAGGAATTCTACTGTCTTGTCGGGCAGTTTGGTACTTATAAACTTGCTGGCTTCATCTaGACTAGGGACTCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: DVLLEEFYCLVGQFGTYKLAGFI*TRDSAG
Trigger: ACCTGCTGAGTCCCTAGTTCAGATGAAGCCAGCAAG...TTTATAAGTACCAAACTGCCCGACAAGACAGTAGAATTCCTCCAGGAGTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTTTTTATTATTCTAACTaGAGTGCACAGATAGCCATC +
Preference number: 2 (lower is better)
Translates to: ASAASPLVLSSMLLVSDAFYYSN*SAQIAI
Trigger: GATGGCTATCTGTGCACTGCAGTTAGAATAATAAAA...AGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATACTCTACAGCCTTCACTaGTGCTGTGATCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQILYSLH*CCDHLC
Trigger: GCAGAGGTGATCACAGCAGCAGTGAAGGCTGTAGAG...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTGCTGCTTCACAGGTCTaGTCTTCTAGTAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: LSSMLLVSDAASQVCSSSAASQV*SSSSFS
Trigger: TGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGC...ACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp AAAGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGCCTGCATGCCCATCATaGTGTAGTCAGGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLPACPS*CSQGPW
Trigger: CCATGGCCCCTGACTACAGCATGATGGGCATGCAGG...CAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR GCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTTCCTTTTCTCCTCTCTaGTTCCTGGAGTCACACAAG +
Preference number: 2 (lower is better)
Translates to: VGISLASAPVCSSSSSMISFSPL*FLESHK
Trigger: CTTGTGTGACTCCAGGAAGCAGAGAGGAGAAAAGGA...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236954.2
3UTR-3UTR CCA 90 bp CACAATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACATTGGGAAGGAAATaGCCCAATCTTTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: HNLSSRTHGWLNRVCPTSTLGRK*PNLSTK
Trigger: TTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGT...TGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCTTGAAGAAATGCTCCTaGCCAATGCCTTTGAATGGA +
Preference number: 2 (lower is better)
Translates to: SSMLLVSDAASQVCSSSSLKKCS*PMPLNG
Trigger: TCCATTCAAAGGCATTGGCCAGGAGCATTTCTTCAA...GCTACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp AAAGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGCTCCCATCTACTCCTTaGGGCTGGCATAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLLPSTP*GWHSSQ
Trigger: CTGGGAGCTATGCCAGCCCCAAGGAGTAGATGGGAG...CAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 90 bp ACCTACTCTGTTCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTaGTTGGCTCTTCTCCCACATCACTCAAAGAGCTGCAAATATCCC +
Preference number: 2 (lower is better)
Translates to: TYSVLSQAVVQYITL*LALLPHHSKSCKYP
Trigger: GGGATATTTGCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGAGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 90 bp GCCACCTACTCTGTTCTGTCCCAGGCTGTTGTCCAATATATCACTTaGTTGTTGGCTCTTCTCCCACATCACTCAAAGAGCTGCAAATAT +
Preference number: 2 (lower is better)
Translates to: ATYSVLSQAVVQYIT*LLALLPHHSKSCKY
Trigger: ATATTTGCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGAGTAGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp CACAATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACACAAACATCAAACTaGTTAGCAAGCACTGAACAG +
Preference number: 2 (lower is better)
Translates to: HNLSSRTHGWLNRVCPTSTQTSN*LASTEQ
Trigger: CTGTTCAGTGCTTGCTAATCAGTTTGATGTTTGTGT...TGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTGGCTCTTCTCCCACATTCTCCAACAACTCCTaGCGCCGTTTCTCAATTTTC +
Preference number: 2 (lower is better)
Translates to: SVPGCCPIYHFVVGSSPTFSNNS*RRFSIF
Trigger: GAAAATTGAGAAACGGCGTCAGGAGTTGTTGGAGAA...TGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCTTGGTCCAAGCAAGATaGTATCTCAATGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTALVQAR*YLNAKA
Trigger: AGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCCAAAGCTACGAAACTTaGATACAGAACAGGCAAACT +
Preference number: 2 (lower is better)
Translates to: SSMLLVSDAASQVCSSSSQSYET*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTG...GCTACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTCTTGTTTTCTTGAACTaGTCAGCAGCCAACCTTCGA +
Preference number: 2 (lower is better)
Translates to: VGISLASAPVCSSSSSMILVFLN*SAANLR
Trigger: TCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTGCCAATGCCTTTGAATaGATCTGGTTTGGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: VGISLASAPVCSSSSSMIANAFE*IWFGFR
Trigger: CCTAAACCCAAACCAGATCCATTCAAAGGCATTGGC...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCTTGAAGAAATGCTCCTaGCCAATGCCTTTGAATGGA +
Preference number: 2 (lower is better)
Translates to: SFGGNIFGLCTSLFQLIFLKKCS*PMPLNG
Trigger: TCCATTCAAAGGCATTGGCCAGGAGCATTTCTTCAA...GAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TCATTGACAAAAGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATACAGCAGCCTCACCTCTaGTCTTGTCTTCGATGCTCC +
Preference number: 2 (lower is better)
Translates to: SLTKGSSPLRYFSSIFTIQQPHL*SCLRCS
Trigger: GGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTG...TATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTTTGTCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATATCCTGCGTCTGCTGTTaGCATAGCTGCTTCGTTTCT +
Preference number: 2 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQISCVCC*HSCFVS
Trigger: AGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGA...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTTTTCCCAAGGCCAGGTaGGAAACAATCCTAGAAACA +
Preference number: 2 (lower is better)
Translates to: VGISLASAPVCSSSSSMIFPKAR*ETILET
Trigger: TGTTTCTAGGATTGTTTCCCACCTGGCCTTGGGAAA...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 90 bp CTGTACACACATGGTCCTAGTACTCCAGAGACTGAGATAGGAGGATaGAATTCAAAGGCAAGCTTGGTCCAAGCAAGATGCTATCTCAAT +
Preference number: 2 (lower is better)
Translates to: LYTHGPSTPETEIGG*NSKASLVQARCYLN
Trigger: ATTGAGATAGCATCTTGCTTGGACCAAGCTTGCCTTTGAATTCAATCCTCCTATCTCAGTCTCTGGAGTACTAGGACCATGTGTGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR CAA 90 bp TACTCTGTTCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTaGGCTCTTCTCCCACATCACTCAAAGAGCTGCAAATATCCCCAA +
Preference number: 2 (lower is better)
Translates to: YSVLSQAVVQYITLL*ALLPHHSKSCKYPQ
Trigger: TTGGGGATATTTGCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp ATAGCATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCATTCTCCAACAACTCCTaGCGCCGTTTCTCAATTTTC +
Preference number: 2 (lower is better)
Translates to: IASILEVHWEGNGPIFPPFSNNS*RRFSIF
Trigger: GAAAATTGAGAAACGGCGTCAGGAGTTGTTGGAGAA...TGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp AGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTGTAGCAGGACCTCTCTaGTTCCTGGAGTCACACAAG +
Preference number: 2 (lower is better)
Translates to: RILTLEVFFQHLHYMFVVVAGPL*FLESHK
Trigger: CTTGTGTGACTCCAGGAAGCAGAGAGGTCCTGCTAC...AACAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR-3UTR CCA 90 bp TGTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAACATTGGGAAGGAAATaGCCCAATCTTTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: CFLELLSSQPSIMVMVHGTLGRK*PNLSTK
Trigger: TTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGT...TCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CTTGTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGTTGAAGAAATGCTCCTaGCCAATGCCTTTGAATGGA +
Preference number: 2 (lower is better)
Translates to: LVFLNCSAANLRLWLWSTLKKCS*PMPLNG
Trigger: TCCATTCAAAGGCATTGGCCAGGAGCATTTCTTCAA...CGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp AGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTAGTAGCTTTTCAGTGTaGGGGTCACTGCTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: RILTLEVFFQHLHYMFVVSSFSV*GSLLAS
Trigger: AGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACT...AACAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGCAGCAGCCTCACCTCTaGTCTTGTCTTCGATGCTCC +
Preference number: 2 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLQQPHL*SCLRCS
Trigger: GGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTG...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp GTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATATAGCATCAATCCTTaGGGTACATTGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: VFLNCSAANLRLWLWSTEYSINP*GTLGRK
Trigger: TTTCCTTCCCAATGTACCTCAAGGATTGATGCTATA...TTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp AGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTCCTTCACTGCTGCTGTaGTCACCTCTGCTAAGACTT +
Preference number: 2 (lower is better)
Translates to: RILTLEVFFQHLHYMFVVPSLLL*SPLLRL
Trigger: AAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGG...AACAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCATAATTCTCAGACTCAGAACTaGCAAAGGAATACTATTTGC +
Preference number: 2 (lower is better)
Translates to: SRTHGWLNRVCPTSTMHNSQTQN*QRNTIC
Trigger: GCAAATAGTATTCCTTTGGCAGTTCTGAGTCTGAGA...ATTATGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp CTTGTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGATCTTTTTGAAGAAATaGTCCTGGCCAATGCCTTTG +
Preference number: 2 (lower is better)
Translates to: LVFLNCSAANLRLWLWSTIFLKK*SWPMPL
Trigger: CAAAGGCATTGGCCAGGAGCATTTCTTCAAAAAGAT...CGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTAATATCTTTGGCCTCTaGACCAGTTTGTTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLNIFGL*TSLFQL
Trigger: GAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATT...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp TTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTTTTATGATGTACTCCTaGAGGAATTCTACTGTCTTG +
Preference number: 2 (lower is better)
Translates to: LSSMLLVSDAASQVCSSSFMMYS*RNSTVL
Trigger: CAAGACAGTAGAATTCCTCCAGGAGTACATCATAAA...ACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGCCTGGTTTCAGATGCTaGTTCACAGGTCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLPGFRC*FTGLLF
Trigger: GAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGG...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAATCATCACTCAAAGAGCTaGAAATATCCCCAACAGAGG +
Preference number: 2 (lower is better)
Translates to: SILEVHWEGNGPIFPPNNHHSKS*KYPQQR
Trigger: CCTCTGTTGGGGATATTTGCAGCTCTTTGAGTGATG...ATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAATTCAAAGGCAAGCTTaGTCCAAGCAAGATGCTATC +
Preference number: 2 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIIQRQA*SKQDAI
Trigger: GATAGCATCTTGCTTGGACCAAGCTTGCCTTTGAAT...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GGGAGGAAAACCCATCATACTGACCCTATAAAACCTAGTACATGCTACTTTACATTTCCCAAGGCCAGGTaGGAAACAATCCTAGAAACA +
Preference number: 2 (lower is better)
Translates to: GRKTHHTDPIKPSTCYFTFPKAR*ETILET
Trigger: TGTTTCTAGGATTGTTTCCCACCTGGCCTTGGGAAA...TGTAAAGTAGCATGTACTAGGTTTTATAGGGTCAGTATGATGGGTTTTCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGGGTCAGCAGTTTCATTaGCAAAAGGATCCTCACCCT +
Preference number: 2 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLGQQFH*QKDPHP
Trigger: AGGGTGAGGATCCTTTTGTCAATGAAACTGCTGACC...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp TACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGAATACTATTTTATTATTCTAACTaGAGTGCACAGATAGCCATC +
Preference number: 2 (lower is better)
Translates to: YRHAEPPFLRLRTAKGILFYYSN*SAQIAI
Trigger: GATGGCTATCTGTGCACTGCAGTTAGAATAATAAAA...TAGTATTCCTTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTTTTTATTATTCTAACTaGAGTGCACAGATAGCCATC +
Preference number: 2 (lower is better)
Translates to: VGISLASAPVCSSSSSMIFYYSN*SAQIAI
Trigger: GATGGCTATCTGTGCACTGCAGTTAGAATAATAAAA...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTATCTTTTTGAAGAAATaGTCCTGGCCAATGCCTTTG +
Preference number: 2 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLIFLKK*SWPMPL
Trigger: CAAAGGCATTGGCCAGGAGCATTTCTTCAAAAAGAT...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTCAAAACACTCTTAGCGAGCTCTCGCACACATaGATGGTTGAATCGTGTGTG +
Preference number: 2 (lower is better)
Translates to: EVFFQHLHYMFVVQNTLSELSHT*MVESCV
Trigger: CACACACGATTCAACCATCCATGTGTGCGAGAGCTC...GCTAAGAGTGTTTTGAACAACAAACATATAGTGAAGATGCTGGAAAAATACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAATTATAGCATCAATCCTTaGGGTACATTGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SILEVHWEGNGPIFPPNNYSINP*GTLGRK
Trigger: TTTCCTTCCCAATGTACCTCAAGGATTGATGCTATA...ATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR TCA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGTTCTCCAACAACTCCTaGCGCCGTTTCTCAATTTTC +
Preference number: 2 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLFSNNS*RRFSIF
Trigger: GAAAATTGAGAAACGGCGTCAGGAGTTGTTGGAGAA...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR CAA 90 bp TCTGTCTCAAGGTCAGCAGTTTCATTGACAAAAGGATCCTCACCCTaGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTCAAA +
Preference number: 2 (lower is better)
Translates to: SVSRSAVSLTKGSSP*RYFSSIFTICLLFK
Trigger: TTTGAACAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTTTGTCAATGAAACTGCTGACCTTGAGACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp AAAGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGATCTTTTTGAAGAAATaGTCCTGGCCAATGCCTTTG +
Preference number: 2 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLIFLKK*SWPMPL
Trigger: CAAAGGCATTGGCCAGGAGCATTTCTTCAAAAAGAT...CAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp AATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGAATTTGAAGAAATGCTCCTaGCCAATGCCTTTGAATGGA +
Preference number: 2 (lower is better)
Translates to: NFFIFKATKLAYRTGKLNLKKCS*PMPLNG
Trigger: TCCATTCAAAGGCATTGGCCAGGAGCATTTCTTCAA...ATTCAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CCA 90 bp GAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTCAAAACACTCTTAGCTTTATGATGTACTCCTaGAGGAATTCTACTGTCTTG +
Preference number: 2 (lower is better)
Translates to: EVFFQHLHYMFVVQNTLSFMMYS*RNSTVL
Trigger: CAAGACAGTAGAATTCCTCCAGGAGTACATCATAAA...GCTAAGAGTGTTTTGAACAACAAACATATAGTGAAGATGCTGGAAAAATACCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR GCA 90 bp GAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTCAAAACACTCTTAGCTTTTATTATTCTAACTaGAGTGCACAGATAGCCATC +
Preference number: 2 (lower is better)
Translates to: EVFFQHLHYMFVVQNTLSFYYSN*SAQIAI
Trigger: GATGGCTATCTGTGCACTGCAGTTAGAATAATAAAA...GCTAAGAGTGTTTTGAACAACAAACATATAGTGAAGATGCTGGAAAAATACCTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CAGCATCTCAGCATGAGACCACACCAGAGCCCCAGGCTGAGGGTCAAGGCTGGAGGAGTTGCTCCGGTCTaGGAAGCGGCCCTGGCCCCG +
Preference number: 3 (lower is better)
Translates to: QHLSMRPHQSPRLRVKAGGVAPV*EAALAP
Trigger: CGGGGCCAGGGCCGCTTCCAAGACCGGAGCAACTCC...TCCAGCCTTGACCCTCAGCCTGGGGCTCTGGTGTGGTCTCATGCTGAGATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR CCA 72 bp TCCCCTGGTGCCAGTCCCGAGACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: SPGASPETVPRR*RPACAAQKPLK
Trigger: TTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCACCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236267.2
3UTR CCA 72 bp GTATCCGCGTCTGGGACCGGCCACATCCGTAAGGCATaGTACCACCAAAACCGCCCACCCCCTGCATGCCCA +
Preference number: 3 (lower is better)
Translates to: VSASGTGHIRKA*YHQNRPPPACP
Trigger: TGGGCATGCAGGGGGTGGGCGGTTTTGGTGGTACCATGCCTTACGGATGTGGCCGGTCCCAGACGCGGATAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR CCA 72 bp ACCCCTGGTGCCAGTCCCGAGACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: TPGASPETVPRR*RPACAAQKPLK
Trigger: TTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCACCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 72 bp AGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTCAAAAGGACGTGTGGG +
Preference number: 3 (lower is better)
Translates to: SPETVPRRWRPA*AAQKPLKRTCG
Trigger: CCCACACGTCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR CCA 72 bp AGAGACCGACTGGTCCTCCCATCTACTCCTTGGGGCTaGCATAGCTCCCAGGAGAGGCCTGTGGCCAGCATC +
Preference number: 3 (lower is better)
Translates to: RDRLVLPSTPWG*HSSQERPVASI
Trigger: GATGCTGGCCACAGGCCTCTCCTGGGAGCTATGCCAGCCCCAAGGAGTAGATGGGAGGACCAGTCGGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp AAAGCTCAGCTCCAGGGGCCAAGTTGGATGCTGCAGCCTGGCAGCCACACCCTGGGACGTGTGGGACTTTaGGCAAGAGGTCACTGCCTG +
Preference number: 3 (lower is better)
Translates to: KAQLQGPSWMLQPGSHTLGRVGL*ARGHCL
Trigger: CAGGCAGTGACCTCTTGCCAAAAGTCCCACACGTCC...CAGGGTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR TCA 72 bp AGAACCCAGAGGAGTTGCCTCACTCCTCCCATGGCCTaGTGGGCAGAGGCCCATCCCACTCATGGCCACCTA +
Preference number: 3 (lower is better)
Translates to: RTQRSCLTPPMA*WAEAHPTHGHL
Trigger: TAGGTGGCCATGAGTGGGATGGGCCTCTGCCCATCAGGCCATGGGAGGAGTGAGGCAACTCCTCTGGGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CCA 72 bp TCCCATGGCCTGATGGGCAGAGGCCCATCCCACTCATaGCCACCTACTCTGTTCTGTCCCAGGCTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: SHGLMGRGPSHS*PPTLFCPRLLS
Trigger: GGACAACAGCCTGGGACAGAACAGAGTAGGTGGCCATGAGTGGGATGGGCCTCTGCCCATCAGGCCATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 72 bp CGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAGGACGTGTGGGACTTT +
Preference number: 3 (lower is better)
Translates to: RDCPTKMATGVR*SEASQKDVWDF
Trigger: AAAGTCCCACACGTCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR CCA 72 bp AGCTCAGCTCCAGGGGCCAAGTTGGATGCTGCAGCCTaGCAGCCACACCCTGTGCCCAGCTTCCATTACATT +
Preference number: 3 (lower is better)
Translates to: SSAPGAKLDAAA*QPHPVPSFHYI
Trigger: AATGTAATGGAAGCTGGGCACAGGGTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGGAGAACCCAGAGGAGTaGCCTCACTCCTCCCATGGC +
Preference number: 3 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLENPEE*PHSSHG
Trigger: GCCATGGGAGGAGTGAGGCAACTCCTCTGGGTTCTC...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 72 bp CCAAGTTGGATGCTGCAGCCTGGCAGCCACACCCTGTaGCCAGCTTCCATTACATTTGTGGTGGGGCTAGGA +
Preference number: 3 (lower is better)
Translates to: PSWMLQPGSHTL*PASITFVVGLG
Trigger: TCCTAGCCCCACCACAAATGTAATGGAAGCTGGGCACAGGGTGTGGCTGCCAGGCTGCAGCATCCAACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGGGACGTGTGGGACTTTaGGCAAGAGGTCACTGCCTG +
Preference number: 3 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLGRVGL*ARGHCL
Trigger: CAGGCAGTGACCTCTTGCCAAAAGTCCCACACGTCC...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCCGCTTCCTGCCCATGTaGTCTGGTCCAAAGCGTTCA +
Preference number: 3 (lower is better)
Translates to: AVITSAKTSAATSSGVSSRFLPM*SGPKRS
Trigger: TGAACGCTTTGGACCAGACAACATGGGCAGGAAGCG...GGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR TCA 72 bp ACCGAGGAGCTGTTAGAGGTTCCTGGTGTACCAGGATaGGAACCCAGAGGAGTTGCCTCACTCCTCCCATGG +
Preference number: 3 (lower is better)
Translates to: TEELLEVPGVPG*EPRGVASLLPW
Trigger: CCATGGGAGGAGTGAGGCAACTCCTCTGGGTTCTCATCCTGGTACACCAGGAACCTCTAACAGCTCCTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 72 bp TTGGATAAGCATCTGAACTGTAACCCCTACCCCTGGTaGCAGTCCCGAGACTGTCCCACGAAGATGGCGACC +
Preference number: 3 (lower is better)
Translates to: LDKHLNCNPYPW*QSRDCPTKMAT
Trigger: GGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCACCAGGGGTAGGGGTTACAGTTCAGATGCTTATCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CCA 72 bp GCTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTGCTaGCCTCTGCTGTGTCCACAGGCCCTTCCACTTCAG +
Preference number: 3 (lower is better)
Translates to: ALLVAFQCGGHC*PLLCPQALPLQ
Trigger: CTGAAGTGGAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACTAGAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR CCA 72 bp AGGTTGGATAAGCATCTGAACTGTAACCCCTACCCCTaGTGCCAGTCCCGAGACTGTCCCACGAAGATGGCG +
Preference number: 3 (lower is better)
Translates to: RLDKHLNCNPYP*CQSRDCPTKMA
Trigger: CGCCATCTTCGTGGGACAGTCTCGGGACTGGCACCAGGGGTAGGGGTTACAGTTCAGATGCTTATCCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CCA 72 bp GATACCCCAAGGCACCGAGGAGCTGTTAGAGGTTCCTaGTGTACCAGGATGAGAACCCAGAGGAGTTGCCTC +
Preference number: 3 (lower is better)
Translates to: DTPRHRGAVRGS*CTRMRTQRSCL
Trigger: GAGGCAACTCCTCTGGGTTCTCATCCTGGTACACCAGGAACCTCTAACAGCTCCTCGGTGCCTTGGGGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 72 bp TGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATaGTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: WPQQPHLWSCLR*SWFQMLLHRSA
Trigger: AGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CTGCTGGCCTCTGCTGTGTCCACAGGCCCTTCCACTTCAGTTAGGACGTCACTATCCTGGCCAATGCCTTaGAATGGATCTGGTTTGGGT +
Preference number: 3 (lower is better)
Translates to: LLASAVSTGPSTSVRTSLSWPMP*NGSGLG
Trigger: ACCCAAACCAGATCCATTCAAAGGCATTGGCCAGGA...TAGTGACGTCCTAACTGAAGTGGAAGGGCCTGTGGACACAGCAGAGGCCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGACGCTTCCTGCCCATGTaGTCTGGTCCAAAGCGTTCA +
Preference number: 3 (lower is better)
Translates to: AANLRLWLWSTECRCRWRRFLPM*SGPKRS
Trigger: TGAACGCTTTGGACCAGACAACATGGGCAGGAAGCG...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR CCA 72 bp ACAAGCTGCAGTGCCACCCTCCATCCCATGTCTAGGTaGGTTGTGGTGACTGTCTTGCTGGCTTCATCTGAA +
Preference number: 3 (lower is better)
Translates to: TSCSATLHPMSR*VVVTVLLASSE
Trigger: TTCAGATGAAGCCAGCAAGACAGTCACCACAACCCACCTAGACATGGGATGGAGGGTGGCACTGCAGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCGCCATCAAAGGCCACTaGGGAAAATGGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: AAVITSAKTSAATSSGVSAIKGH*GKWFTS
Trigger: AGAGGTAAACCATTTTCCCAAGTGGCCTTTGATGGC...GGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGGGCCTCTGCACCAGTTaGTTCCAGCTCATCTTCCAT +
Preference number: 3 (lower is better)
Translates to: LLSSQPSIMVMVHGMQMPGLCTS*FQLIFH
Trigger: ATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCC...CGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGTCAGCACGGGCCAGTTaGGCATCAGGTTCTTCATAC +
Preference number: 3 (lower is better)
Translates to: LLSSQPSIMVMVHGMQMPSARAS*ASGSSY
Trigger: GTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGA...CGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CAA 90 bp CAGCATCTCAGCATGAGACCACACCAGAGCCCCAGGCTGAGGGTCAAGGCTGGAGTCCAATATATCACTTaGTTGTTGGCTCTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: QHLSMRPHQSPRLRVKAGVQYIT*LLALLP
Trigger: TGGGAGAAGAGCCAACAACAAAGTGATATATTGGAC...TCCAGCCTTGACCCTCAGCCTGGGGCTCTGGTGTGGTCTCATGCTGAGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CCA 72 bp GGTAGGGGGCACAATCTGAGCTCTCGCACACATGGATaGTTGAATCGTGTGTGTCCCACATCAACCATGCAT +
Preference number: 3 (lower is better)
Translates to: GRGHNLSSRTHG*LNRVCPTSTMH
Trigger: ATGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTGCCCCCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR CCA 72 bp CAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTaGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTA +
Preference number: 3 (lower is better)
Translates to: QQPHLWSCLRCS*FQMLLHRSALL
Trigger: TAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TGCCTTCGGCAGTGTCTTCACTCTAGAGGCCCAGGTAGGCATGCTTCCTATGGAGCCATCAAAGGCCACTaGGGAAAATGGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: CLRQCLHSRGPGRHASYGAIKGH*GKWFTS
Trigger: AGAGGTAAACCATTTTCCCAAGTGGCCTTTGATGGC...TCCATAGGAAGCATGCCTACCTGGGCCTCTAGAGTGAAGACACTGCCGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GCCTTCACTGCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGCCATCAAAGGCCACTaGGGAAAATGGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: AFTAAVITSAKTSAATSSAIKGH*GKWFTS
Trigger: AGAGGTAAACCATTTTCCCAAGTGGCCTTTGATGGC...AGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGTGGAGACTTGTTTTCTaGAACTGCTCAGCAGCCAAC +
Preference number: 3 (lower is better)
Translates to: WPQQPHLWSCLRCSWFQMWRLVF*NCSAAN
Trigger: GTTGGCTGCTGAGCAGTTCAAGAAAACAAGTCTCCA...CATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp ATGACAGGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGTCCTGGCCAATGCCTTaGAATGGATCTGGTTTGGGT +
Preference number: 3 (lower is better)
Translates to: MTGNVLPASAVGIAASFLSWPMP*NGSGLG
Trigger: ACCCAAACCAGATCCATTCAAAGGCATTGGCCAGGA...CAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACCTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp ACTGCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCAAAGGATCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: TAAVITSAKTSAATSSGVKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTT...GACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GCTGTTAGAGGTTCCTGGTGTACCAGGATGAGAACCCAGAGGAGTTGCCTCACTAGGTCAGCAGTTTCATaGACAAAAGGATCCTCACCC +
Preference number: 3 (lower is better)
Translates to: AVRGSWCTRMRTQRSCLTRSAVS*TKGSSP
Trigger: GGGTGAGGATCCTTTTGTCAATGAAACTGCTGACCT...AGTGAGGCAACTCCTCTGGGTTCTCATCCTGGTACACCAGGAACCTCTAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GATGCTTTTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGGGAGTTGCTCCGGTCTaGGAAGCGGCCCTGGCCCCG +
Preference number: 3 (lower is better)
Translates to: DAFEFLHLQSYETCIQNRGVAPV*EAALAP
Trigger: CGGGGCCAGGGCCGCTTCCAAGACCGGAGCAACTCC...CCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAAAAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CAA 90 bp GCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTTCTGTCCCAGGCTGTaGTCCAATATATCACTTTGT +
Preference number: 3 (lower is better)
Translates to: AAVITSAKTSAATSSGVSFCPRL*SNISLC
Trigger: ACAAAGTGATATATTGGACAACAGCCTGGGACAGAA...GGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR TCA 72 bp GAGGCCCAGGTAGGCATGCTTCCTATGGAACAGCTCTaGCAATCTTATACACAGGCCAAGGTCACCATCTTG +
Preference number: 3 (lower is better)
Translates to: EAQVGMLPMEQL*QSYTQAKVTIL
Trigger: CAAGATGGTGACCTTGGCCTGTGTATAAGATTGTCAGAGCTGTTCCATAGGAAGCATGCCTACCTGGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR GCA 72 bp TCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTaGTCTTCTAGTAGCTTTTCAGTGTGGGGGTCACTG +
Preference number: 3 (lower is better)
Translates to: SMLLVSDAASQV*SSSSFSVWGSL
Trigger: CAGTGACCCCCACACTGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR GCA 72 bp CAGGTTCTTCATACAATGGAAACTGCTTCCGCTTCCTaGCCATGTTGTCTGGTCCAAAGCGTTCAAACCCCC +
Preference number: 3 (lower is better)
Translates to: QVLHTMETASAS*PCCLVQSVQTP
Trigger: GGGGGTTTGAACGCTTTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR CCA 72 bp CAGACAGATCTCCGTCACTGTCAGCACGGGCCAGTTTaGCATCAGGTTCTTCATACAATGGAAACTGCTTCC +
Preference number: 3 (lower is better)
Translates to: QTDLRHCQHGPV*HQVLHTMETAS
Trigger: GGAAGCAGTTTCCATTGTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGACAGTGACGGAGATCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CAA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCAGCCATCAAAGGCCACTaGGGAAAATGGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: ELSHTWMVESCVSHINHAAIKGH*GKWFTS
Trigger: AGAGGTAAACCATTTTCCCAAGTGGCCTTTGATGGC...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGACTGAGATAGGAGGATaGAATTCAAAGGCAAGCTTG +
Preference number: 3 (lower is better)
Translates to: WPQQPHLWSCLRCSWFQMTEIGG*NSKASL
Trigger: CAAGCTTGCCTTTGAATTCAATCCTCCTATCTCAGT...CATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TCTGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGAGTCCAATATATCACTTaGTTGTTGGCTCTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: SGLSSLTSGLVFDAPGFRVQYIT*LLALLP
Trigger: TGGGAGAAGAGCCAACAACAAAGTGATATATTGGAC...TCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 72 bp GCCAGTTTGGCATCAGGTTCTTCATACAATGGAAACTaGTTCCGCTTCCTGCCCATGTTGTCTGGTCCAAAG +
Preference number: 3 (lower is better)
Translates to: ASLASGSSYNGN*FRFLPMLSGPK
Trigger: CTTTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCTGATGCCAAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR-3UTR CAA 90 bp TACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGAATACTAGGCCTCTGCACCAGTTaGTTCCAGCTCATCTTCCAT +
Preference number: 3 (lower is better)
Translates to: YRHAEPPFLRLRTAKGILGLCTS*FQLIFH
Trigger: ATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCC...TAGTATTCCTTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp ATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCTCCTCCTTCTCCCAATATATCACTTTGTaGTTGGCTCTTCTCCCACAT +
Preference number: 3 (lower is better)
Translates to: ITSAKTSAATSSGVSSFSQYITL*LALLPH
Trigger: ATGTGGGAGAAGAGCCAACAACAAAGTGATATATTG...GGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTGCAAAGTCATCCCGGTaGGGTAGCAGGACCTCTCTG +
Preference number: 3 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLAKSSR*GSRTSL
Trigger: CAGAGAGGTCCTGCTACCCAACCGGGATGACTTTGC...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR TCA 72 bp GTGGGACTTTTGGCAAGAGGTCACTGCCTGAAACTATaGCTGCTGTTTAATAGCAAAGTCATCCCGGTTGGG +
Preference number: 3 (lower is better)
Translates to: VGLLARGHCLKL*LLFNSKVIPVG
Trigger: CCCAACCGGGATGACTTTGCTATTAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTGCCAAAAGTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR CCA 72 bp GAAGAAATGCTCCTGGCCAATGCCTTTGAATGGATCTaGTTTGGGTTTAGGGCTCTCCTTCTCCAACAACTC +
Preference number: 3 (lower is better)
Translates to: EEMLLANAFEWI*FGFRALLLQQL
Trigger: GAGTTGTTGGAGAAGGAGAGCCCTAAACCCAAACCAGATCCATTCAAAGGCATTGGCCAGGAGCATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp AAATCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTCCTGGCCAATGCCTTaGAATGGATCTGGTTTGGGT +
Preference number: 3 (lower is better)
Translates to: KSFGGNIFGLCTSLFQLISWPMP*NGSGLG
Trigger: ACCCAAACCAGATCCATTCAAAGGCATTGGCCAGGA...GATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTTCCTGGCCAATGCCTTaGAATGGATCTGGTTTGGGT +
Preference number: 3 (lower is better)
Translates to: VGISLASAPVCSSSSSMISWPMP*NGSGLG
Trigger: ACCCAAACCAGATCCATTCAAAGGCATTGGCCAGGA...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CACTCAAAGAGCTGCAAATATCCCCAACAGAGGCAGCAGCTAGAAAGTCTCAGGAAAGGATCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: HSKSCKYPQQRQQLESLRKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTT...CCTGAGACTTTCTAGCTGCTGCCTCTGTTGGGGATATTTGCAGCTCTTTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CACAATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAAAAGGATCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: HNLSSRTHGWLNRVCPTSKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTT...TGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAGCCTCACCTCTGGTCTaGTCTTCGATGCTCCTGGTT +
Preference number: 3 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIASPLV*SSMLLV
Trigger: AACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGC...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAAGCCATCAAAGGCCACTaGGGAAAATGGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: VFLNCSAANLRLWLWSTEAIKGH*GKWFTS
Trigger: AGAGGTAAACCATTTTCCCAAGTGGCCTTTGATGGC...TTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTGGCTCTTCTCCCACAGTTGTGGTGACTGTCTaGCTGGCTTCATCTGAACTA +
Preference number: 3 (lower is better)
Translates to: SVPGCCPIYHFVVGSSPTVVVTV*LASSEL
Trigger: TAGTTCAGATGAAGCCAGCAAGACAGTCACCACAAC...TGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCACAATATATCACTTTGTaGTTGGCTCTTCTCCCACAT +
Preference number: 3 (lower is better)
Translates to: ELSHTWMVESCVSHINHAQYITL*LALLPH
Trigger: ATGTGGGAGAAGAGCCAACAACAAAGTGATATATTG...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR GCA 72 bp TTGTTGTTGGCTCTTCTCCCACATCACTCAAAGAGCTaGAAATATCCCCAACAGAGGCAGCAGCTAGAAAGT +
Preference number: 3 (lower is better)
Translates to: LLLALLPHHSKS*KYPQQRQQLES
Trigger: ACTTTCTAGCTGCTGCCTCTGTTGGGGATATTTGCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAGGTAGATTTCTGAGTTaGAGGCCTGCCTGGTCTACA +
Preference number: 3 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIGRFLS*RPAWST
Trigger: TGTAGACCAGGCAGGCCTCAAACTCAGAAATCTACC...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCACTGAGATAGGAGGATaGAATTCAAAGGCAAGCTTG +
Preference number: 3 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTATEIGG*NSKASL
Trigger: CAAGCTTGCCTTTGAATTCAATCCTCCTATCTCAGT...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp ACCAGGAAGATCTACTTTTATTATTCTAACTGCAGTGCACAGATAGCCATCAAAGGACGTGTGGGACTTTaGGCAAGAGGTCACTGCCTG +
Preference number: 3 (lower is better)
Translates to: TRKIYFYYSNCSAQIAIKGRVGL*ARGHCL
Trigger: CAGGCAGTGACCTCTTGCCAAAAGTCCCACACGTCC...TTTGATGGCTATCTGTGCACTGCAGTTAGAATAATAAAAGTAGATCTTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCGTCTTGTCGGGCAGTTaGGTACTTATAAATCGCAAA +
Preference number: 3 (lower is better)
Translates to: SFGGNIFGLCTSLFQLIFVLSGS*VLINRK
Trigger: TTTGCGATTTATAAGTACCAAACTGCCCGACAAGAC...GAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTTTCTGTCCCAGGCTGTaGTCCAATATATCACTTTGT +
Preference number: 3 (lower is better)
Translates to: LSSMLLVSDAASQVCSSSFCPRL*SNISLC
Trigger: ACAAAGTGATATATTGGACAACAGCCTGGGACAGAA...ACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR TCA 72 bp GAGGTAGGAAGCCATCTACTGTATAGCATCAATCCTTaGGGTACATTGGGAAGGAAATGGCCCAATCTTTCC +
Preference number: 3 (lower is better)
Translates to: EVGSHLLYSINP*GTLGRKWPNLS
Trigger: GGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATGCTATACAGTAGATGGCTTCCTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TTGCTGGCCCAATCTCTAGTTTCCACTCACAAAACCAACATCCTTGGACTTTCCTCAAAGCTACGAAACTaGCATACAGAACAGGCAAAC +
Preference number: 3 (lower is better)
Translates to: LLAQSLVSTHKTNILGLSSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGA...GGAAAGTCCAAGGATGTTGGTTTTGTGAGTGGAAACTAGAGATTGGGCCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TGTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAGTCTTGTCGGGCAGTTaGGTACTTATAAATCGCAAA +
Preference number: 3 (lower is better)
Translates to: CFLELLSSQPSIMVMVHGVLSGS*VLINRK
Trigger: TTTGCGATTTATAAGTACCAAACTGCCCGACAAGAC...TCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CTTGTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGTCTTGTCGGGCAGTTaGGTACTTATAAATCGCAAA +
Preference number: 3 (lower is better)
Translates to: LVFLNCSAANLRLWLWSTVLSGS*VLINRK
Trigger: TTTGCGATTTATAAGTACCAAACTGCCCGACAAGAC...CGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGGCCTCACCTCTGGTCTaGTCTTCGATGCTCCTGGTT +
Preference number: 3 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLASPLV*SSMLLV
Trigger: AACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGC...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAGTTGTGGTGACTGTCTaGCTGGCTTCATCTGAACTA +
Preference number: 3 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIVVVTV*LASSEL
Trigger: TAGTTCAGATGAAGCCAGCAAGACAGTCACCACAAC...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CCA 72 bp TGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTaGCTCTTCTCCCACATCACTCAAAGAGCTGCAAAT +
Preference number: 3 (lower is better)
Translates to: CPRLLSNISLCC*LFSHITQRAAN
Trigger: ATTTGCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAATAGGTCAGCAGTTTCATaGACAAAAGGATCCTCACCC +
Preference number: 3 (lower is better)
Translates to: SILEVHWEGNGPIFPPNNRSAVS*TKGSSP
Trigger: GGGTGAGGATCCTTTTGTCAATGAAACTGCTGACCT...ATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GATGCTTTTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGTCAGCACGGGCCAGTTaGGCATCAGGTTCTTCATAC +
Preference number: 3 (lower is better)
Translates to: DAFEFLHLQSYETCIQNRSARAS*ASGSSY
Trigger: GTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGA...CCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAAAAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR TCA 72 bp CATAGAATACAGTGTATTATAAAACCAAAGCCCAGCTaGGCTTGGCTGTACACACATGGTCCTAGTACTCCA +
Preference number: 3 (lower is better)
Translates to: HRIQCIIKPKPS*AWLYTHGPSTP
Trigger: TGGAGTACTAGGACCATGTGTGTACAGCCAAGCTCAGCTGGGCTTTGGTTTTATAATACACTGTATTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR TCA 72 bp TCCTGCACAAATAGAGGTGGAACACAAACATCAAACTaGTTAGCAAGCACTGAACAGAGAGAACGAATGCCT +
Preference number: 3 (lower is better)
Translates to: SCTNRGGTQTSN*LASTEQRERMP
Trigger: AGGCATTCGTTCTCTCTGTTCAGTGCTTGCTAATCAGTTTGATGTTTGTGTTCCACCTCTATTTGTGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTAATTCAAAGGCAAGCTaGGTCCAAGCAAGATGCTAT +
Preference number: 3 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLNSKAS*VQARCY
Trigger: ATAGCATCTTGCTTGGACCAAGCTTGCCTTTGAATT...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp GATGTACTCCTGGAGGAATTCTACTGTCTTGTCGGGCAGTTTGGTACTTATAAAGTCTTGTCGGGCAGTTaGGTACTTATAAATCGCAAA +
Preference number: 3 (lower is better)
Translates to: DVLLEEFYCLVGQFGTYKVLSGS*VLINRK
Trigger: TTTGCGATTTATAAGTACCAAACTGCCCGACAAGAC...TTTATAAGTACCAAACTGCCCGACAAGACAGTAGAATTCCTCCAGGAGTACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGAGGTCAGCAGTTTCATaGACAAAAGGATCCTCACCC +
Preference number: 3 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLRSAVS*TKGSSP
Trigger: GGGTGAGGATCCTTTTGTCAATGAAACTGCTGACCT...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TCATTGACAAAAGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATAAATTCAAAGGCAAGCTaGGTCCAAGCAAGATGCTAT +
Preference number: 3 (lower is better)
Translates to: SLTKGSSPLRYFSSIFTINSKAS*VQARCY
Trigger: ATAGCATCTTGCTTGGACCAAGCTTGCCTTTGAATT...TATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTTTGTCAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR-3UTR CAA 90 bp TCATTGACAAAAGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATCAAAGCTACGAAACTaGCATACAGAACAGGCAAAC +
Preference number: 3 (lower is better)
Translates to: SLTKGSSPLRYFSSIFTISKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGA...TATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTTTGTCAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR GCA 72 bp ACAATTACCAGGAAGATCTACTTTTATTATTCTAACTaGAGTGCACAGATAGCCATCAAAGGCCACTTGGGA +
Preference number: 3 (lower is better)
Translates to: TITRKIYFYYSN*SAQIAIKGHLG
Trigger: TCCCAAGTGGCCTTTGATGGCTATCTGTGCACTGCAGTTAGAATAATAAAAGTAGATCTTCCTGGTAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000237381.2
3UTR GCA 72 bp GGATTGAATTCAAAGGCAAGCTTGGTCCAAGCAAGATaGTATCTCAATGCCAAAGCTAAAATAAAGGCCTTA +
Preference number: 3 (lower is better)
Translates to: GLNSKASLVQAR*YLNAKAKIKAL
Trigger: TAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAAGCTTGCCTTTGAATTCAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GTGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGAAAGGGAGCCCCGCTCTaGGGCTGGGTCCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: VPVPRLSHEDGDRRALLRKGAPL*GWVPTV
Trigger: GACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTT...TCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GTGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGAGAAGAGGGAAGGAGGTaGCCTGCTGGTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VPVPRLSHEDGDRRALLREEGRR*PAGGGP
Trigger: GGGCCCTCCACCAGCAGGCCACCTCCTTCCCTCTTC...TCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp CAGGAAAGCTCAGCTCCAGGGGCCAAGTTGGATGCTGCAGCCTGGCAGCCACACGAAGCGGAAGGAGCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QESSAPGAKLDAAAWQPHEAEGA*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGCTCCTTCCGCTTC...GTGTGGCTGCCAGGCTGCAGCATCCAACTTGGCCCCTGGAGCTGAGCTTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
CDS-3UTR GCA 90 bp CTCCCATGGCCTGATGGGCAGAGGCCCATCCCACTCATGGCCACCTACTCTGTTAGGTCCAGCACTCCATaGCCCATAGCCTCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: LPWPDGQRPIPLMATYSVRSSTP*PIASVA
Trigger: GGCTACGGAGGCTATGGGGCATGGAGTGCTGGACCT...AACAGAGTAGGTGGCCATGAGTGGGATGGGCCTCTGCCCATCAGGCCATGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp CTCCCATGGCCTGATGGGCAGAGGCCCATCCCACTCATGGCCACCTACTCTGTTGTCGTAGGACTCGTATaGCTGGAAGCGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPWPDGQRPIPLMATYSVVVGLV*LEAEGA
Trigger: GGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGAC...AACAGAGTAGGTGGCCATGAGTGGGATGGGCCTCTGCCCATCAGGCCATGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
3UTR CAA 72 bp AGGTTCCTGGTGTACCAGGATGAGAACCCAGAGGAGTaGCCTCACTCCTCCCATGGCCTGATGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RFLVYQDENPEE*PHSSHGLMGRG
Trigger: GCCTCTGCCCATCAGGCCATGGGAGGAGTGAGGCAACTCCTCTGGGTTCTCATCCTGGTACACCAGGAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GCACTGAACAGAGAGAACGAATGCCTTCGGCAGTGTCTTCACTCTAGAGGCCCAGAAGAGGGAAGGAGGTaGCCTGCTGGTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALNRENECLRQCLHSRGPEEGRR*PAGGGP
Trigger: GGGCCCTCCACCAGCAGGCCACCTCCTTCCCTCTTC...TGGGCCTCTAGAGTGAAGACACTGCCGAAGGCATTCGTTCTCTCTGTTCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp CCAGCTCCATCATCGTTTTCAGACAGATCTCCGTCACTGTCAGCACGGGCCAGTAGGTCCAGCACTCCATaGCCCATAGCCTCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: PAPSSFSDRSPSLSARASRSSTP*PIASVA
Trigger: GGCTACGGAGGCTATGGGGCATGGAGTGCTGGACCT...ACTGGCCCGTGCTGACAGTGACGGAGATCTGTCTGAAAACGATGATGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
CDS-3UTR GCA 90 bp CAGAACAGGCAAACTGAATCCTGTCAGCTGCTCGGTCCCGCATCCTGTCTCTCCGCAAAAGACGCCACATaGATGGCAGGGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QNRQTESCQLLGPASCLSAKDAT*MAGLPA
Trigger: AGCTGGGAGCCCTGCCATGCATGTGGCGTCTTTTGC...GGAGAGACAGGATGCGGGACCGAGCAGCTGACAGGATTCAGTTTGCCTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp GCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTCGCCCACCCCCTGCATaGCCATCATGCTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ASAASPLVLSSMLLVSDARPPPA*PSCCSQ
Trigger: CTGACTACAGCATGATGGGCATGCAGGGGGTGGGCG...AGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGAGGTGGCCTGCTGGTaGAGGGCCCACCGAGACCAC +
Preference number: 4 (lower is better)
Translates to: SELSHTWMVESCVSHINHEVACW*RAHRDH
Trigger: GTGGTCTCGGTGGGCCCTCCACCAGCAGGCCACCTC...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp ACTGCTGCTGTGATCACCTCTGCTAAGACTTCGGCAGCTACCTCCTCTGGTGTCAAGGAGCCTGGGTGTTaGCAGGTCCAGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: TAAVITSAKTSAATSSGVKEPGC*QVQHSM
Trigger: CATGGAGTGCTGGACCTGCCAACACCCAGGCTCCTT...GACACCAGAGGAGGTAGCTGCCGAAGTCTTAGCAGAGGTGATCACAGCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
CDS-3UTR CCA 90 bp AATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCTCTTGGAAGCGGCCCTaGCCCCGGCCCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NLSSRTHGWLNRVCPTSTSWKRP*PRPLKK
Trigger: TTTCTTGAGGGGCCGGGGCCAGGGCCGCTTCCAAGA...GGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GTTTTCTTGAACTGCTCAGCAGCCAACCTTCGATTATGGTTATGGTCCACGGAAGAGGTGGCCTGCTGGTaGAGGGCCCACCGAGACCAC +
Preference number: 4 (lower is better)
Translates to: VFLNCSAANLRLWLWSTEEVACW*RAHRDH
Trigger: GTGGTCTCGGTGGGCCCTCCACCAGCAGGCCACCTC...TTCCGTGGACCATAACCATAATCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp AATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCCGCCCACCCCCTGCATaGCCATCATGCTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: NLSSRTHGWLNRVCPTSTRPPPA*PSCCSQ
Trigger: CTGACTACAGCATGATGGGCATGCAGGGGGTGGGCG...GGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp TGCCTTCGGCAGTGTCTTCACTCTAGAGGCCCAGGTAGGCATGCTTCCTATGGATTATGGTCCACGGAATaGAGATGCCGCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: CLRQCLHSRGPGRHASYGLWSTE*RCRWRS
Trigger: GCTTCTCCAGCGGCATCTGCATTCCGTGGACCATAA...TCCATAGGAAGCATGCCTACCTGGGCCTCTAGAGTGAAGACACTGCCGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp GGTAACGTGCTTCCTGCGTCTGCTGTTGGCATAGCTGCTTCGTTTCTGGCCTCAGTAGCAGGACCTCTCTaGTTCCTGGAGTCACACAAG +
Preference number: 4 (lower is better)
Translates to: GNVLPASAVGIAASFLASVAGPL*FLESHK
Trigger: CTTGTGTGACTCCAGGAAGCAGAGAGGTCCTGCTAC...TGAGGCCAGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACGTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000236267.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp CCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCTGCTTCCATATGTACCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PQQPHLWSCLRCSWFQMLLPYVP*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGGTACATATGGAAG...CAGCATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAGTCGTAGGACTCGTATaGCTGGAAGCGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AANLRLWLWSTECRCRWRVVGLV*LEAEGA
Trigger: AGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGAC...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp CTCTGTTCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTTGGCTCTTCTAAGGGAGCCCCGCTCTaGGGCTGGGTCCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: LCSVPGCCPIYHFVVGSSKGAPL*GWVPTV
Trigger: GACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTT...AGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 72 bp CTCCATCCCATGTCTAGGTGGGTTGTGGTGACTGTCTaGCTGGCTTCATCTGAACTAGGGACTCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LHPMSRWVVVTV*LASSELGTQQV
Trigger: GACCTGCTGAGTCCCTAGTTCAGATGAAGCCAGCAAGACAGTCACCACAACCCACCTAGACATGGGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
CDS-3UTR TCA 90 bp AATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCCTTGGTGGCCTCCCATaGGGCTGGGCCGTAACTATA +
Preference number: 4 (lower is better)
Translates to: NLSSRTHGWLNRVCPTSTLGGLP*GWAVTI
Trigger: TATAGTTACGGCCCAGCCTCATGGGAGGCCACCAAG...GGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp ATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGCAGGGCTCCCAGCTaGCAGGCCACCATCATTGGT +
Preference number: 4 (lower is better)
Translates to: MLLYRHAEPPFLRLRTAKGRAPS*QATIIG
Trigger: ACCAATGATGGTGGCCTGGCAGCTGGGAGCCCTGCC...TTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCAAAAGACGCCACATaGATGGCAGGGCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SELSHTWMVESCVSHINHAKDAT*MAGLPA
Trigger: AGCTGGGAGCCCTGCCATGCATGTGGCGTCTTTTGC...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCAGTCGTAGGACTCGTATaGCTGGAAGCGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ELSHTWMVESCVSHINHAVVGLV*LEAEGA
Trigger: AGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGAC...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAAAGGGAGCCCCGCTCTaGGGCTGGGTCCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIKGAPL*GWVPTV
Trigger: GACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTT...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236954.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp AAATCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTCTTGGAAGCGGCCCTaGCCCCGGCCCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KSFGGNIFGLCTSLFQLISWKRP*PRPLKK
Trigger: TTTCTTGAGGGGCCGGGGCCAGGGCCGCTTCCAAGA...GATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp CACAATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAGGCAGCTACCTCCTCTaGTGTCTCCTCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HNLSSRTHGWLNRVCPTSGSYLL*CLLLLL
Trigger: GAGGAGAAGGAGGAGACACCAGAGGAGGTAGCTGCC...TGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp ATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAAGGTCCAGCACTCCATaGCCCATAGCCTCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: MLLYRHAEPPFLRLRTAKRSSTP*PIASVA
Trigger: GGCTACGGAGGCTATGGGGCATGGAGTGCTGGACCT...TTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp TACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGAATACTACAGTGTGGGGGTCACTaGTGGCCTCTGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: YRHAEPPFLRLRTAKGILQCGGH*WPLLCP
Trigger: TGGACACAGCAGAGGCCAGCAGTGACCCCCACACTG...TAGTATTCCTTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR TCA 90 bp TGCCTTCGGCAGTGTCTTCACTCTAGAGGCCCAGGTAGGCATGCTTCCTATGGAAAGGATCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: CLRQCLHSRGPGRHASYGKDPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGATCCTT...TCCATAGGAAGCATGCCTACCTGGGCCTCTAGAGTGAAGACACTGCCGAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp AAAGAGCTGCAAATATCCCCAACAGAGGCAGCAGCTAGAAAGTCTCAGGAAATAAGGTCCAGCACTCCATaGCCCATAGCCTCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: KELQISPTEAAARKSQEIRSSTP*PIASVA
Trigger: GGCTACGGAGGCTATGGGGCATGGAGTGCTGGACCT...TATTTCCTGAGACTTTCTAGCTGCTGCCTCTGTTGGGGATATTTGCAGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GTCTCAGGAAATATAACAAGCTGCAGTGCCACCCTCCATCCCATGTCTAGGTGGTTCCTGCAGGGACACTaGTGTTCTGGGCATTGTAGT +
Preference number: 4 (lower is better)
Translates to: VSGNITSCSATLHPMSRWFLQGH*CSGHCS
Trigger: ACTACAATGCCCAGAACACCAGTGTCCCTGCAGGAA...CCACCTAGACATGGGATGGAGGGTGGCACTGCAGCTTGTTATATTTCCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp AGGATCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTAAGGGAGCCCCGCTCTaGGGCTGGGTCCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: RILTLEVFFQHLHYMFVVKGAPL*GWVPTV
Trigger: GACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTT...AACAACAAACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATCCTGCCCATGTTGTCTaGTCCAAAGCGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: SELSHTWMVESCVSHINHPAHVV*SKAFKP
Trigger: GGGTTTGAACGCTTTGGACCAGACAACATGGGCAGG...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCCAGCAGCCTCACCTCTaGTCTTGTCTTCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTAQQPHL*SCLRCS
Trigger: GGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTG...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp GTGGGAATATCTTTGGCCTCTGCACCAGTTTGTTCCAGCTCATCTTCCATGATTAAGGAGCCTGGGTGTTaGCAGGTCCAGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: VGISLASAPVCSSSSSMIKEPGC*QVQHSM
Trigger: CATGGAGTGCTGGACCTGCCAACACCCAGGCTCCTT...AATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
CDS-3UTR GCA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCACTGCTTCCGCTTCCTaGCCATGTTGTCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTATASAS*PCCLVQ
Trigger: TTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGT...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTGTCACTGCTGGCCTCTaGTGTGTCCACAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLVTAGL*CVHRPF
Trigger: GAAGGGCCTGTGGACACAGCAGAGGCCAGCAGTGAC...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp GCACTGAACAGAGAGAACGAATGCCTTCGGCAGTGTCTTCACTCTAGAGGCCCACATAACCTTGCCAGCTaGTCATACCACTTCCATATG +
Preference number: 4 (lower is better)
Translates to: ALNRENECLRQCLHSRGPHNLAS*SYHFHM
Trigger: CATATGGAAGTGGTATGACCAGCTGGCAAGGTTATG...TGGGCCTCTAGAGTGAAGACACTGCCGAAGGCATTCGTTCTCTCTGTTCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
3UTR CAA 72 bp TCATTCGGTGGGAATATCTTTGGCCTCTGCACCAGTTaGTTCCAGCTCATCTTCCATGATTCCCGGGATTGC +
Preference number: 4 (lower is better)
Translates to: SFGGNIFGLCTS*FQLIFHDSRDC
Trigger: GCAATCCCGGGAATCATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
3UTR CAA 72 bp TCATACAATGGAAACTGCTTCCGCTTCCTGCCCATGTaGTCTGGTCCAAAGCGTTCAAACCCCCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: SYNGNCFRFLPM*SGPKRSNPLLL
Trigger: TAGAAGGAGGGGGTTTGAACGCTTTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGTTTCCATTGTATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
CDS-3UTR TCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTCTTGGTGGCCTCCCATaGGGCTGGGCCGTAACTATA +
Preference number: 4 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLLGGLP*GWAVTI
Trigger: TATAGTTACGGCCCAGCCTCATGGGAGGCCACCAAG...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTCCTGCATGCCCATCATaGTGTAGTCAGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLPACPS*CSQGPW
Trigger: CCATGGCCCCTGACTACAGCATGATGGGCATGCAGG...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCTTCCTGCAGGGACACTaGTGTTCTGGGCATTGTAGT +
Preference number: 4 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTAFLQGH*CSGHCS
Trigger: ACTACAATGCCCAGAACACCAGTGTCCCTGCAGGAA...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TTGCTGGCCCAATCTCTAGTTTCCACTCACAAAACCAACATCCTTGGACTTTCCCCTGCCCATGTTGTCTaGTCCAAAGCGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: LLAQSLVSTHKTNILGLSPAHVV*SKAFKP
Trigger: GGGTTTGAACGCTTTGGACCAGACAACATGGGCAGG...GGAAAGTCCAAGGATGTTGGTTTTGTGAGTGGAAACTAGAGATTGGGCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
3UTR CAA 72 bp CACTCATGGCCACCTACTCTGTTCTGTCCCAGGCTGTaGTCCAATATATCACTTTGTTGTTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HSWPPTLFCPRL*SNISLCCWLFS
Trigger: GGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGAGTAGGTGGCCATGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 72 bp AACTATGACTGCTGTTTAATAGCAAAGTCATCCCGGTaGGGTAGCAGGACCTCTCTGCTTCCTGGAGTCACA +
Preference number: 4 (lower is better)
Translates to: NYDCCLIAKSSR*GSRTSLLPGVT
Trigger: TGTGACTCCAGGAAGCAGAGAGGTCCTGCTACCCAACCGGGATGACTTTGCTATTAAACAGCAGTCATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235764.2
CDS-3UTR GCA 90 bp TCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAATCCTGCATGCCCATCATaGTGTAGTCAGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SILEVHWEGNGPIFPPNNPACPS*CSQGPW
Trigger: CCATGGCCCCTGACTACAGCATGATGGGCATGCAGG...ATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCTCCTTTTCTCCTCTCTaGTTCCTGGAGTCACACAAG +
Preference number: 4 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTASFSPL*FLESHK
Trigger: CTTGTGTGACTCCAGGAAGCAGAGAGGAGAAAAGGA...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp CACAATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAGCTGCTTCACAGGTCTaGTCTTCTAGTAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: HNLSSRTHGWLNRVCPTSAASQV*SSSSFS
Trigger: TGAAAAGCTACTAGAAGAGCAGACCTGTGAAGCAGC...TGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp ATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAACCTGGTTTCAGATGCTaGTTCACAGGTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: MLLYRHAEPPFLRLRTAKPGFRC*FTGLLF
Trigger: GAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGG...TTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTCGTGCTTCCTGCGTCTaGTGTTGGCATAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLRASCV*CWHSCF
Trigger: GAAGCAGCTATGCCAACAGCAGACGCAGGAAGCACG...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATAATATCTTTGGCCTCTaGACCAGTTTGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SELSHTWMVESCVSHINHNIFGL*TSLFQL
Trigger: GAGCTGGAACAAACTGGTGCAGAGGCCAAAGATATT...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAATGTACCCTGGGTGTTaGCAGGTCCAGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIMYPGC*QVQHSM
Trigger: CATGGAGTGCTGGACCTGCCAACACCCAGGGTACAT...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp AGGAAAACCCATCATACTGACCCTATAAAACCTAGTACATGCTACTTTACAGACAAGACGCCACATGCATaGCAGGGCTCCCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RKTHHTDPIKPSTCYFTDKTPHA*QGSQLP
Trigger: TGGCAGCTGGGAGCCCTGCCATGCATGTGGCGTCTT...GTCTGTAAAGTAGCATGTACTAGGTTTTATAGGGTCAGTATGATGGGTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGAATACTATCCTGCGTCTGCTGTTaGCATAGCTGCTTCGTTTCT +
Preference number: 4 (lower is better)
Translates to: YRHAEPPFLRLRTAKGILSCVCC*HSCFVS
Trigger: AGAAACGAAGCAGCTATGCCAACAGCAGACGCAGGA...TAGTATTCCTTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAACTGCTTCCGCTTCCTaGCCATGTTGTCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQITASAS*PCCLVQ
Trigger: TTGGACCAGACAACATGGGCAGGAAGCGGAAGCAGT...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GATGCTTTTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGAAGACGCCACATGCATaGCAGGGCTCCCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DAFEFLHLQSYETCIQNRKTPHA*QGSQLP
Trigger: TGGCAGCTGGGAGCCCTGCCATGCATGTGGCGTCTT...CCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAAAAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp GGGAGGAAAACCCATCATACTGACCCTATAAAACCTAGTACATGCTACTTTACATGTAGTCAGGGGCCATaGACTGGGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GRKTHHTDPIKPSTCYFTCSQGP*TGRRGK
Trigger: CTTCCCTCTTCTCCCAGTCCATGGCCCCTGACTACA...TGTAAAGTAGCATGTACTAGGTTTTATAGGGTCAGTATGATGGGTTTTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TCTTCGATGCTCCTGGTTTCAGATGCTGCTTCACAGGTCTGCTCTTCTAGTAGCAGGTTCTTCATACAATaGAAACTGCTTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSMLLVSDAASQVCSSSSRFFIQ*KLLPLP
Trigger: AGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCT...GCTACTAGAAGAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGCATCGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCGCCAATGCCTTTGAATaGATCTGGTTTGGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTAANAFE*IWFGFR
Trigger: CCTAAACCCAAACCAGATCCATTCAAAGGCATTGGC...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp ACCAGGAAGATCTACTTTTATTATTCTAACTGCAGTGCACAGATAGCCATCAAATGTGGGGGTCACTGCTaGCCTCTGCTGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: TRKIYFYYSNCSAQIAIKCGGHC*PLLCPQ
Trigger: CTGTGGACACAGCAGAGGCCAGCAGTGACCCCCACA...TTTGATGGCTATCTGTGCACTGCAGTTAGAATAATAAAAGTAGATCTTCCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
3UTR CAA 72 bp GTTCTGTCCCAGGCTGTTGTCCAATATATCACTTTGTaGTTGGCTCTTCTCCCACATCACTCAAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSQAVVQYITL*LALLPHHSKSC
Trigger: GCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp TACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGAATACTACTTGTTTTCTTGAACTaGTCAGCAGCCAACCTTCGA +
Preference number: 4 (lower is better)
Translates to: YRHAEPPFLRLRTAKGILLVFLN*SAANLR
Trigger: TCGAAGGTTGGCTGCTGAGCAGTTCAAGAAAACAAG...TAGTATTCCTTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp GGGAGGAAAACCCATCATACTGACCCTATAAAACCTAGTACATGCTACTTTACATGCTGTTGGCATAGCTaGTTCGTTTCTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GRKTHHTDPIKPSTCYFTCCWHS*FVSGLS
Trigger: GCTGAGGCCAGAAACGAAGCAGCTATGCCAACAGCA...TGTAAAGTAGCATGTACTAGGTTTTATAGGGTCAGTATGATGGGTTTTCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp GGGAGGAAAACCCATCATACTGACCCTATAAAACCTAGTACATGCTACTTTACAAGTAGCTTTTCAGTGTaGGGGTCACTGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GRKTHHTDPIKPSTCYFTSSFSV*GSLLAS
Trigger: AGAGGCCAGCAGTGACCCCCACACTGAAAAGCTACT...TGTAAAGTAGCATGTACTAGGTTTTATAGGGTCAGTATGATGGGTTTTCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp GAGGTATTTTTCCAGCATCTTCACTATATGTTTGTTGTTCAAAACACTCTTAGCGAAGCGGAAGGAGCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EVFFQHLHYMFVVQNTLSEAEGA*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGCTCCTTCCGCTTC...GCTAAGAGTGTTTTGAACAACAAACATATAGTGAAGATGCTGGAAAAATACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR CAA 72 bp CTGTCCCAGGCTGTTGTCCAATATATCACTTTGTTGTaGGCTCTTCTCCCACATCACTCAAAGAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LSQAVVQYITLL*ALLPHHSKSCK
Trigger: TTTGCAGCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
3UTR CAA 72 bp TCTGTTCTGTCCCAGGCTGTTGTCCAATATATCACTTaGTTGTTGGCTCTTCTCCCACATCACTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SVLSQAVVQYIT*LLALLPHHSKS
Trigger: GCTCTTTGAGTGATGTGGGAGAAGAGCCAACAACAAAGTGATATATTGGACAACAGCCTGGGACAGAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000237381.2
CDS-3UTR TCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAGGTCAGCAGTTTCATTaGCAAAAGGATCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIGQQFH*QKDPHP
Trigger: AGGGTGAGGATCCTTTTGTCAATGAAACTGCTGACC...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGATGTACCCTGGGTGTTaGCAGGTCCAGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLMYPGC*QVQHSM
Trigger: CATGGAGTGCTGGACCTGCCAACACCCAGGGTACAT...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TTGAATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGTGTAGTCAGGGGCCATaGACTGGGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LNFFIFKATKLAYRTGKLCSQGP*TGRRGK
Trigger: CTTCCCTCTTCTCCCAGTCCATGGCCCCTGACTACA...CAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp TCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATTTTATGATGTACTCCTaGAGGAATTCTACTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SELSHTWMVESCVSHINHFMMYS*RNSTVL
Trigger: CAAGACAGTAGAATTCCTCCAGGAGTACATCATAAA...ATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp AATTTCTTCATCTTCAAAGCTACGAAACTTGCATACAGAACAGGCAAACTGAATGTCGTAGGACTCGTATaGCTGGAAGCGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: NFFIFKATKLAYRTGKLNVVGLV*LEAEGA
Trigger: GGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGAC...ATTCAGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGAAGATGAAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
3UTR CAA 72 bp GAGACTGAGATAGGAGGATTGAATTCAAAGGCAAGCTaGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ETEIGGLNSKAS*VQARCYLNAKA
Trigger: AGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAAGCTTGCCTTTGAATTCAATCCTCCTATCTCAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp TACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGGAATACTAATCTTTTTGAAGAAATaGTCCTGGCCAATGCCTTTG +
Preference number: 4 (lower is better)
Translates to: YRHAEPPFLRLRTAKGILIFLKK*SWPMPL
Trigger: CAAAGGCATTGGCCAGGAGCATTTCTTCAAAAAGAT...TAGTATTCCTTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR GCA 90 bp TTGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCTAAAATAAAGGCCTTAAAAGCTCCTGGTTTCAGATaGTGCTTCACAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVQARCYLNAKAKIKALKAPGFR*CFTGLL
Trigger: GAGCAGACCTGTGAAGCAGCATCTGAAACCAGGAGC...TTTTAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp TTGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCTAAAATAAAGGCCTTAAAACTTCCATATGTACCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVQARCYLNAKAKIKALKLPYVP*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGGTACATATGGAAG...TTTTAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR TCA 90 bp GGGAGGAAAACCCATCATACTGACCCTATAAAACCTAGTACATGCTACTTTACATTCTCCAACAACTCCTaGCGCCGTTTCTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: GRKTHHTDPIKPSTCYFTFSNNS*RRFSIF
Trigger: GAAAATTGAGAAACGGCGTCAGGAGTTGTTGGAGAA...TGTAAAGTAGCATGTACTAGGTTTTATAGGGTCAGTATGATGGGTTTTCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR TCA 90 bp TTGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCTAAAATAAAGGCCTTAAAACCTGGCCAATGCCTTTaGATGGATCTGGTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVQARCYLNAKAKIKALKPGQCL*MDLVWV
Trigger: AACCCAAACCAGATCCATTCAAAGGCATTGGCCAGG...TTTTAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR TCA 90 bp TTGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCTAAAATAAAGGCCTTAAAAGGAGACTTGTTTTCTTaGACTGCTCAGCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: LVQARCYLNAKAKIKALKGDLFS*TAQQPT
Trigger: GGTTGGCTGCTGAGCAGTTCAAGAAAACAAGTCTCC...TTTTAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR TCA 90 bp ACCAGGAAGATCTACTTTTATTATTCTAACTGCAGTGCACAGATAGCCATCAAACCTTCACTGCTGCTGTaGTCACCTCTGCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: TRKIYFYYSNCSAQIAIKPSLLL*SPLLRL
Trigger: AAGTCTTAGCAGAGGTGATCACAGCAGCAGTGAAGG...TTTGATGGCTATCTGTGCACTGCAGTTAGAATAATAAAAGTAGATCTTCCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATAAGGTTCTTCATACAATaGAAACTGCTTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIRFFIQ*KLLPLP
Trigger: AGGAAGCGGAAGCAGTTTCCATTGTATGAAGAACCT...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR GCA 90 bp CATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCAAATACAAAGCTACGAAACTTaGATACAGAACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: HQSLRYIGKEMAQSFHQIQSYET*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTG...TATTTGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
3UTR CAA 72 bp TCTAACTGCAGTGCACAGATAGCCATCAAAGGCCACTaGGGAAAATGGTTTACCTCTTTTTGTATTCTAACA +
Preference number: 4 (lower is better)
Translates to: SNCSAQIAIKGH*GKWFTSFCILT
Trigger: TGTTAGAATACAAAAAGAGGTAAACCATTTTCCCAAGTGGCCTTTGATGGCTATCTGTGCACTGCAGTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236267.2
ENSMUST00000236954.2
ENSMUST00000237381.2
CDS-3UTR CCA 90 bp ACCAGGAAGATCTACTTTTATTATTCTAACTGCAGTGCACAGATAGCCATCAAATTGAAGAAATGCTCCTaGCCAATGCCTTTGAATGGA +
Preference number: 4 (lower is better)
Translates to: TRKIYFYYSNCSAQIAIKLKKCS*PMPLNG
Trigger: TCCATTCAAAGGCATTGGCCAGGAGCATTTCTTCAA...TTTGATGGCTATCTGTGCACTGCAGTTAGAATAATAAAAGTAGATCTTCCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS CCA 90 bp GGGATTATGCTCAGGTATACAGGGCCTGGCGTCGTAGGACTCGTATaGCTGGAAGCGGAAGGAGCTGTCTCGGTCCTGCACGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GIMLRYTGPGVVGLV*LEAEGAVSVLHALP
Trigger: GGGGAGGGCGTGCAGGACCGAGACAGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGACGCCAGGCCCTGTATACCTGAGCATAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS CCA 90 bp CATGCATGGCAGGGCTCCCAGCTGCCAGGCCACCATCATTGGTCTTaGTGGCCTCCCATGAGGCTGGGCCGTAACTATAGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: HAWQGSQLPGHHHWS*WPPMRLGRNYRVFL
Trigger: CAGGAACACCCTATAGTTACGGCCCAGCCTCATGGGAGGCCACCAAGACCAATGATGGTGGCCTGGCAGCTGGGAGCCCTGCCATGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002699.7
ENSMUST00000235360.2
ENSMUST00000235702.2
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS CCA 90 bp AACCGTAGCCGGGGCGGTAGGGATTATGCTCAGGTATACAGGGCCTaGCGTCGTAGGACTCGTATGGCTGGAAGCGGAAGGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: NRSRGGRDYAQVYRA*RRRTRMAGSGRSLG
Trigger: ACCCAGGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGACGCCAGGCCCTGTATACCTGAGCATAATCCCTACCGCCCCGGCTACGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235764.2
ENSMUST00000236580.2
ENSMUST00000236954.2
CDS CCA 90 bp CTGAGTTGTCGGTACATGGCTCTGGGGCAAAAGACGCCACATGCATaGCAGGGCTCCCAGCTGCCAGGCCACCATCATTGGTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LSCRYMALGQKTPHA*QGSQLPGHHHWSWW
Trigger: CCACCAAGACCAATGATGGTGGCCTGGCAGCTGGGAGCCCTGCCATGCATGTGGCGTCTTTTGCCCCAGAGCCATGTACCGACAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235360.2
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS CCA 90 bp AACCGTAGCCGGGGCGGTAGGGATTATGCTCAGGTATACAGGGCCTaGCGTCGTAGGACTCGTATGGCTGGAAGCGGAAGGAGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: NRSRGGRDYAQVYRA*RRRTRMAGSGRSCL
Trigger: GAGACAGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGACGCCAGGCCCTGTATACCTGAGCATAATCCCTACCGCCCCGGCTACGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS GCA 90 bp GAGTCTGAGTTGTCGGTACATGGCTCTGGGGCAAAAGACGCCACATaGATGGCAGGGCTCCCAGCTGCCAGGCCACCATCATTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ESELSVHGSGAKDAT*MAGLPAARPPSLVL
Trigger: CAAGACCAATGATGGTGGCCTGGCAGCTGGGAGCCCTGCCATGCATGTGGCGTCTTTTGCCCCAGAGCCATGTACCGACAACTCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235360.2
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS-3UTR CAA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCGGAGTTGCTCCGGTCTaGGAAGCGGCCCTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTAGVAPV*EAALAP
Trigger: CGGGGCCAGGGCCGCTTCCAAGACCGGAGCAACTCC...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp GCAGCCAACCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAGAAGGAGCCTGGGTGTaGGCAGGTCCAGCACTCCAT +
Preference number: 5 (lower is better)
Translates to: AANLRLWLWSTECRCRWREGAWV*AGPALH
Trigger: ATGGAGTGCTGGACCTGCCAACACCCAGGCTCCTTC...TCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGGTTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
CDS-3UTR CAA 90 bp TGGCCTCAGCAGCCTCACCTCTGGTCTTGTCTTCGATGCTCCTGGTTTCAGATGCGCTTCCTGCCCATGTaGTCTGGTCCAAAGCGTTCA +
Preference number: 5 (lower is better)
Translates to: WPQQPHLWSCLRCSWFQMRFLPM*SGPKRS
Trigger: TGAACGCTTTGGACCAGACAACATGGGCAGGAAGCG...CATCTGAAACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGCTGCTGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp CCTTCGATTATGGTTATGGTCCACGGAATGCAGATGCCGCTGGAGAAGCTGATGGAAGGAGCCTGGGTGTaGGCAGGTCCAGCACTCCAT +
Preference number: 5 (lower is better)
Translates to: PSIMVMVHGMQMPLEKLMEGAWV*AGPALH
Trigger: ATGGAGTGCTGGACCTGCCAACACCCAGGCTCCTTC...CATCAGCTTCTCCAGCGGCATCTGCATTCCGTGGACCATAACCATAATCGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235764.2
ENSMUST00000236954.2
CDS-3UTR CAA 90 bp GGGGCACAATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACTCAGCACGGGCCAGTTaGGCATCAGGTTCTTCATAC +
Preference number: 5 (lower is better)
Translates to: GAQSELSHTWMVESCVSHSARAS*ASGSSY
Trigger: GTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGA...GTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATTGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000002699.7
ENSMUST00000236267.2
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCATCAGCACGGGCCAGTTaGGCATCAGGTTCTTCATAC +
Preference number: 5 (lower is better)
Translates to: ELSHTWMVESCVSHINHASARAS*ASGSSY
Trigger: GTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGA...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000002699.7
ENSMUST00000236267.2
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCAGGCCTCTGCACCAGTTaGTTCCAGCTCATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ELSHTWMVESCVSHINHAGLCTS*FQLIFH
Trigger: ATGGAAGATGAGCTGGAACAAACTGGTGCAGAGGCC...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS CCA 90 bp CCCATGAGGCTGGGCCGTAACTATAGGGTGTTCCTGCAGGGACACTaGTGTTCTGGGCATTGTAGTAGTTGTAGTTTTCATAACCTTGCC +
Preference number: 5 (lower is better)
Translates to: PMRLGRNYRVFLQGH*CSGHCSSCSFHNLA
Trigger: GGCAAGGTTATGAAAACTACAACTACTACAATGCCCAGAACACCAGTGTCCCTGCAGGAACACCCTATAGTTACGGCCCAGCCTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000002699.7
ENSMUST00000235360.2
ENSMUST00000235702.2
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS-3UTR CAA 90 bp TACATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCTATGTACCCTGGGTGTaGGCAGGTCCAGCACTCCAT +
Preference number: 5 (lower is better)
Translates to: YMLLYRHAEPPFLRLRTAYVPWV*AGPALH
Trigger: ATGGAGTGCTGGACCTGCCAACACCCAGGGTACATA...GGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCATCGGTGGGAATATCTTaGGCCTCTGCACCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: ELSHTWMVESCVSHINHASVGIS*ASAPVC
Trigger: ACAAACTGGTGCAGAGGCCAAAGATATTCCCACCGA...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CAA 90 bp TCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCATAATATGAGCGAGTCTGAGTaGTCGGTACATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: SRTHGWLNRVCPTSTMHNMSESE*SVHGSG
Trigger: CCCAGAGCCATGTACCGACAACTCAGACTCGCTCAT...ATTATGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp ATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAACGCTTCCTGCCCATGTaGTCTGGTCCAAAGCGTTCA +
Preference number: 5 (lower is better)
Translates to: MLLYRHAEPPFLRLRTAKRFLPM*SGPKRS
Trigger: TGAACGCTTTGGACCAGACAACATGGGCAGGAAGCG...TTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp GAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCAAGGTCAGCAGTTTCATaGACAAAAGGATCCTCACCC +
Preference number: 5 (lower is better)
Translates to: ELSHTWMVESCVSHINHARSAVS*TKGSSP
Trigger: GGGTGAGGATCCTTTTGTCAATGAAACTGCTGACCT...TGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CAA 90 bp ATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAAGCCTCACCTCTGGTCTaGTCTTCGATGCTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: MLLYRHAEPPFLRLRTAKASPLV*SSMLLV
Trigger: AACCAGGAGCATCGAAGACAAGACCAGAGGTGAGGC...TTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CAA 90 bp GGGAAGGAAATGGCCCAATCTTTCCACCAAATAATACACACCCTAGTACATCTTATGAGCGAGTCTGAGTaGTCGGTACATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GKEMAQSFHQIIHTLVHLMSESE*SVHGSG
Trigger: CCCAGAGCCATGTACCGACAACTCAGACTCGCTCAT...AAGATGTACTAGGGTGTGTATTATTTGGTGGAAAGATTGGGCCATTTCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp AATCTGAGCTCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCAAAGGATCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: NLSSRTHGWLNRVCPTSTKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGATCCTTT...GGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGAGCTCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CAA 90 bp GGGAGGAAAACCCATCATACTGACCCTATAAAACCTAGTACATGCTACTTTACATATGTACCCTGGGTGTaGGCAGGTCCAGCACTCCAT +
Preference number: 5 (lower is better)
Translates to: GRKTHHTDPIKPSTCYFTYVPWV*AGPALH
Trigger: ATGGAGTGCTGGACCTGCCAACACCCAGGGTACATA...TGTAAAGTAGCATGTACTAGGTTTTATAGGGTCAGTATGATGGGTTTTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp ATAGCATCAATCCTTGAGGTACATTGGGAAGGAAATGGCCCAATCTTTCCACCATCCTGGCCAATGCCTTaGAATGGATCTGGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: IASILEVHWEGNGPIFPPSWPMP*NGSGLG
Trigger: ACCCAAACCAGATCCATTCAAAGGCATTGGCCAGGA...TGGTGGAAAGATTGGGCCATTTCCTTCCCAATGTACCTCAAGGATTGATGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CAA 90 bp ATGCTACTTTACAGACATGCTGAGCCTCCCTTTCTCAGACTCAGAACTGCCAAATGGAGACTTGTTTTCTaGAACTGCTCAGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: MLLYRHAEPPFLRLRTAKWRLVF*NCSAAN
Trigger: GTTGGCTGCTGAGCAGTTCAAGAAAACAAGTCTCCA...TTTGGCAGTTCTGAGTCTGAGAAAGGGAGGCTCAGCATGTCTGTAAAGTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CAA 90 bp TCTCGCACACATGGATGGTTGAATCGTGTGTGTCCCACATCAACCATGCATAATTCAAAGCTACGAAACTaGCATACAGAACAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SRTHGWLNRVCPTSTMHNSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTTCGTAGCTTTGA...ATTATGCATGGTTGATGTGGGACACACACGATTCAACCATCCATGTGTGCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS-3UTR CAA 90 bp TTGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCTAAAATAAAGGCCTTAAAATCAGCACGGGCCAGTTaGGCATCAGGTTCTTCATAC +
Preference number: 5 (lower is better)
Translates to: LVQARCYLNAKAKIKALKSARAS*ASGSSY
Trigger: GTATGAAGAACCTGATGCCAAACTGGCCCGTGCTGA...TTTTAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS-3UTR CAA 90 bp TTGGTCCAAGCAAGATGCTATCTCAATGCCAAAGCTAAAATAAAGGCCTTAAAAGTCTTGTCGGGCAGTTaGGTACTTATAAATCGCAAA +
Preference number: 5 (lower is better)
Translates to: LVQARCYLNAKAKIKALKVLSGS*VLINRK
Trigger: TTTGCGATTTATAAGTACCAAACTGCCCGACAAGAC...TTTTAAGGCCTTTATTTTAGCTTTGGCATTGAGATAGCATCTTGCTTGGACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002699.7
CDS CCA 72 bp CCGGCCCCTCAAGAAACCATCAAGGGAGCCCCGCTCTaGGGCTGGGTCCCGACAGTCGTTGAATGTCCCACC +
Preference number: 6 (lower is better)
Translates to: PAPQETIKGAPL*GWVPTVVECPT
Trigger: GGTGGGACATTCAACGACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTTGATGGTTTCTTGAGGGGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CCA 72 bp AAGGTGCTGGAGTTGCTCCGGTCTTGGAAGCGGCCCTaGCCCCGGCCCCTCAAGAAACCATCAAGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: KVLELLRSWKRP*PRPLKKPSREP
Trigger: GGGCTCCCTTGATGGTTTCTTGAGGGGCCGGGGCCAGGGCCGCTTCCAAGACCGGAGCAACTCCAGCACCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CCA 72 bp CAGGGCTCCCAGCTGCCAGGCCACCATCATTGGTCTTaGTGGCCTCCCATGAGGCTGGGCCGTAACTATAGG +
Preference number: 6 (lower is better)
Translates to: QGSQLPGHHHWS*WPPMRLGRNYR
Trigger: CCTATAGTTACGGCCCAGCCTCATGGGAGGCCACCAAGACCAATGATGGTGGCCTGGCAGCTGGGAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000002699.7
ENSMUST00000235360.2
ENSMUST00000235702.2
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS CAA 90 bp GCTGAGGGTGGCATGAAAGGGTCACTACGTATGAAGGTGCTGGAGTaGCTCCGGTCTTGGAAGCGGCCCTGGCCCCGGCCCCTCAAGAAA +
Preference number: 6 (lower is better)
Translates to: AEGGMKGSLRMKVLE*LRSWKRPWPRPLKK
Trigger: TTTCTTGAGGGGCCGGGGCCAGGGCCGCTTCCAAGACCGGAGCAACTCCAGCACCTTCATACGTAGTGACCCTTTCATGCCACCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CCA 72 bp CTCAGGTATACAGGGCCTGGCGTCGTAGGACTCGTATaGCTGGAAGCGGAAGGAGCTGTCTCGGTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: LRYTGPGVVGLV*LEAEGAVSVLH
Trigger: GTGCAGGACCGAGACAGCTCCTTCCGCTTCCAGCCATACGAGTCCTACGACGCCAGGCCCTGTATACCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS CCA 72 bp CGGGGCGGTAGGGATTATGCTCAGGTATACAGGGCCTaGCGTCGTAGGACTCGTATGGCTGGAAGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: RGGRDYAQVYRA*RRRTRMAGSGR
Trigger: CCTTCCGCTTCCAGCCATACGAGTCCTACGACGCCAGGCCCTGTATACCTGAGCATAATCCCTACCGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236580.2
ENSMUST00000236954.2
ENSMUST00000237381.2
ENSMUST00000237860.2
CDS CCA 72 bp TCACTACGTATGAAGGTGCTGGAGTTGCTCCGGTCTTaGAAGCGGCCCTGGCCCCGGCCCCTCAAGAAACCA +
Preference number: 6 (lower is better)
Translates to: SLRMKVLELLRS*KRPWPRPLKKP
Trigger: TGGTTTCTTGAGGGGCCGGGGCCAGGGCCGCTTCCAAGACCGGAGCAACTCCAGCACCTTCATACGTAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CAA 72 bp AGGGAGCCCCGCTCTGGGGCTGGGTCCCGACAGTCGTaGAATGTCCCACCAAAGCTACCATTGCGGTCAGTT +
Preference number: 6 (lower is better)
Translates to: REPRSGAGSRQS*NVPPKLPLRSV
Trigger: AACTGACCGCAATGGTAGCTTTGGTGGGACATTCAACGACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236954.2
ENSMUST00000237381.2
CDS CCA 72 bp CCTCAAGAAACCATCAAGGGAGCCCCGCTCTGGGGCTaGGTCCCGACAGTCGTTGAATGTCCCACCAAAGCT +
Preference number: 6 (lower is better)
Translates to: PQETIKGAPLWG*VPTVVECPTKA
Trigger: AGCTTTGGTGGGACATTCAACGACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTTGATGGTTTCTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CAA 90 bp AAACCATCAAGGGAGCCCCGCTCTGGGGCTGGGTCCCGACAGTCGTaGAATGTCCCACCAAAGCTACCATTGCGGTCAGTTCCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: KPSREPRSGAGSRQS*NVPPKLPLRSVPKS
Trigger: TGACTTGGGAACTGACCGCAATGGTAGCTTTGGTGGGACATTCAACGACTGTCGGGACCCAGCCCCAGAGCGGGGCTCCCTTGATGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000002699.7
ENSMUST00000235764.2
ENSMUST00000236954.2
ENSMUST00000237381.2
CDS CCA 72 bp AGCTGGTCATACCACTTCCATATGTACCCTGGGTGTTaGCAGGTCCAGCACTCCATGCCCCATAGCCTCCGT +
Preference number: 6 (lower is better)
Translates to: SWSYHFHMYPGC*QVQHSMPHSLR
Trigger: ACGGAGGCTATGGGGCATGGAGTGCTGGACCTGCCAACACCCAGGGTACATATGGAAGTGGTATGACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CAA 90 bp GACACTGGTGTTCTGGGCATTGTAGTAGTTGTAGTTTTCATAACCTaGCCAGCTGGTCATACCACTTCCATATGTACCCTGGGTGTTGGC +
Preference number: 6 (lower is better)
Translates to: DTGVLGIVVVVVFIT*PAGHTTSICTLGVG
Trigger: GCCAACACCCAGGGTACATATGGAAGTGGTATGACCAGCTGGCAAGGTTATGAAAACTACAACTACTACAATGCCCAGAACACCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CCA 72 bp CATTGTAGTAGTTGTAGTTTTCATAACCTTGCCAGCTaGTCATACCACTTCCATATGTACCCTGGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: HCSSCSFHNLAS*SYHFHMYPGCW
Trigger: CCAACACCCAGGGTACATATGGAAGTGGTATGACCAGCTGGCAAGGTTATGAAAACTACAACTACTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2
CDS CAA 72 bp GTTCTGGGCATTGTAGTAGTTGTAGTTTTCATAACCTaGCCAGCTGGTCATACCACTTCCATATGTACCCTG +
Preference number: 6 (lower is better)
Translates to: VLGIVVVVVFIT*PAGHTTSICTL
Trigger: CAGGGTACATATGGAAGTGGTATGACCAGCTGGCAAGGTTATGAAAACTACAACTACTACAATGCCCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000002699.7
ENSMUST00000237381.2