RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061603

Ensembl transcript IDs: ENSMUST00000095737.5, ENSMUST00000219786.2

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGTGAAAGAGAGTAACTGTTCTCAATTACCTGAAGGGCGGCCATaGGACAGAGGGACCAGGAATCTTCTAAGGGCCTCTCTGCAGCAC +
Preference number: 1 (lower is better)
Translates to: PVKESNCSQLPEGRP*DRGTRNLLRASLQH
Trigger: GTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGTCCCTCTGTCTCATGGCCGCCCTTCAGGTAATTGAGAACAGTTACTCTCTTTCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 90 bp GCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCAAGTCGAGTaGACCAAGCAACAAGATAATCAAACCTGGGCTGTCACAGGCCCC +
Preference number: 1 (lower is better)
Translates to: APTLFSAIMVKSQVE*TKQQDNQTWAVTGP
Trigger: GGGGCCTGTGACAGCCCAGGTTTGATTATCTTGTTGCTTGGTTCACTCGACTTGGCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 90 bp TCTTGCGTGGCAAGAAGAGAGCCAAGTAGACTCTTCACTGGAAACTaGTTATTGACAATTGCCCCAATGCCTGCAAATGCCTGTGCTGTG +
Preference number: 1 (lower is better)
Translates to: SCVARREPSRLFTGN*LLTIAPMPANACAV
Trigger: CACAGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCAGTGAAGAGTCTACTTGGCTCTCTTCTTGCCACGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 90 bp GACTCTTTCTCTACACTTGCTTTCTTCCTCATCTGTGGGACGTTATaGCACACACGTCTGTGTGGTCAGTCACTCTGTCTCAAACATAGA +
Preference number: 1 (lower is better)
Translates to: DSFSTLAFFLICGTL*HTRLCGQSLCLKHR
Trigger: TCTATGTTTGAGACAGAGTGACTGACCACACAGACGTGTGTGCCATAACGTCCCACAGATGAGGAAGAAAGCAAGTGTAGAGAAAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 90 bp CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGTGTCATGTGGTGTGACATGGACAGAAAGAGAGATACAAATT +
Preference number: 1 (lower is better)
Translates to: LCVCVCVCVCVCVCV*VSCGVTWTEREIQI
Trigger: AATTTGTATCTCTCTTTCTGTCCATGTCACACCACATGACACTCACACACACACACACACACACACACACACACACACACACACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 90 bp TGGCAAGAAGAGAGCCAAGTAGACTCTTCACTGGAAACTGCTTATTaGCAATTGCCCCAATGCCTGCAAATGCCTGTGCTGTGTTTTCAA +
Preference number: 1 (lower is better)
Translates to: WQEESQVDSSLETAY*QLPQCLQMPVLCFQ
Trigger: TTGAAAACACAGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCAGTGAAGAGTCTACTTGGCTCTCTTCTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 90 bp TTAACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTaGTGGGAGTCCATAAGGGAGAGTCAGATGGTCTCCAGGCATTAT +
Preference number: 1 (lower is better)
Translates to: LTSKHREEQTAYFLL*WESIRESQMVSRHY
Trigger: ATAATGCCTGGAGACCATCTGACTCTCCCTTATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 90 bp TTAGTGTCTACACAGGGTATGAGACTGAGGCTCTTCCATCTCTTCTaGCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAAC +
Preference number: 1 (lower is better)
Translates to: LVSTQGMRLRLFHLF*LEKASINSRVNLIN
Trigger: GTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGCCAGAAGAGATGGAAGAGCCTCAGTCTCATACCCTGTGTAGACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 90 bp GAAAACTTATCACTTAAGTGTCCACACACCTCTCTACATGTAGGATaGAGACAGTCCCTTGACATCAAGGGTTCTGCCTGTTTAACATTC +
Preference number: 1 (lower is better)
Translates to: ENLSLKCPHTSLHVG*RQSLDIKGSACLTF
Trigger: GAATGTTAAACAGGCAGAACCCTTGATGTCAAGGGACTGTCTTCATCCTACATGTAGAGAGGTGTGTGGACACTTAAGTGATAAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 90 bp ATTATGCAAACTCTGATTAACTTCAAAGCACAGGGAGGAACAAACTaGATACTTTCTGCTTTGGTGGGAGTCCATAAGGGAGAGTCAGAT +
Preference number: 1 (lower is better)
Translates to: IMQTLINFKAQGGTN*ILSALVGVHKGESD
Trigger: ATCTGACTCTCCCTTATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTTAATCAGAGTTTGCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTCATGTaGTGTGACATGGACAGAAAGAGAGATACAAATTCCAAAAGTAAA +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVCVCVSVM*CDMDRKRDTNSKSK
Trigger: TTTACTTTTGGAATTTGTATCTCTCTTTCTGTCCATGTCACACCACATGACACTCACACACACACACACACACACACACACACACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 90 bp AGCAAAGGATCTCACCAGACACTGAATCTTCTGTTGCCCCAATCTTaGTCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTT +
Preference number: 1 (lower is better)
Translates to: SKGSHQTLNLLLPQS*SSQLPDCLATNILV
Trigger: AACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGACCAAGATTGGGGCAACAGAAGATTCAGTGTCTGGTGAGATCCTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 90 bp TGGAAACTGCTTATTGACAATTGCCCCAATGCCTGCAAATGCCTGTaGTGTGTTTTCAATGTCTGTATCTCTAAATTTGCATGTTCAAGC +
Preference number: 1 (lower is better)
Translates to: WKLLIDNCPNACKCL*CVFNVCISKFACSS
Trigger: GCTTGAACATGCAAATTTAGAGATACAGACATTGAAAACACAGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 90 bp CTTCACTGGAAACTGCTTATTGACAATTGCCCCAATGCCTGCAAATaGCTGTGCTGTGTTTTCAATGTCTGTATCTCTAAATTTGCATGT +
Preference number: 1 (lower is better)
Translates to: LHWKLLIDNCPNACK*LCCVFNVCISKFAC
Trigger: ACATGCAAATTTAGAGATACAGACATTGAAAACACAGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 90 bp CAAGCAAATGGGTGGCAAGTCTCAAATGCAGAAGTAATTGCTGTGTaGAAAGCATGTAGCTGTTTTAAAAGAAGCATCTGTATGGTTTGC +
Preference number: 1 (lower is better)
Translates to: QANGWQVSNAEVIAV*KACSCFKRSICMVC
Trigger: GCAAACCATACAGATGCTTCTTTTAAAACAGCTACATGCTTTCCACACAGCAATTACTTCTGCATTTGAGACTTGCCACCCATTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 90 bp AACACACCATCACTCATAAGCTATAGTCACAAAACCAGCTCATCCTaGGATTTACAACGAGAAGATAACAGGACTTATCCAAGTTATGAC +
Preference number: 1 (lower is better)
Translates to: NTPSLISYSHKTSSS*DLQREDNRTYPSYD
Trigger: GTCATAACTTGGATAAGTCCTGTTATCTTCTCGTTGTAAATCTCAGGATGAGCTGGTTTTGTGACTATAGCTTATGAGTGATGGTGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 90 bp TCTACCCACAACCACAACAGGATCTCAAATGGATGGCTATTTCCTTaGCTTATGAAACTTTTTATATATGACCAGGAAATGAAAATGTGT +
Preference number: 1 (lower is better)
Translates to: STHNHNRISNGWLFP*LMKLFIYDQEMKMC
Trigger: ACACATTTTCATTTCCTGGTCATATATAAAAAGTTTCATAAGCCAAGGAAATAGCCATCCATTTGAGATCCTGTTGTGGTTGTGGGTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGCATAGCCTTTCTCTTTaGCCCAGCCTCTCACCGCTG +
Preference number: 2 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGHSLSL*PSLSPL
Trigger: CAGCGGTGAGAGGCTGGGGCAAAGAGAAAGGCTATG...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 90 bp AGGAGGGAGGAGAGAGGGAAAATAGAAGTCTTGCTGGAGAGAGGGTaGCCAGAGGTAGCTTGGGACAGGAATCCACGGGAGAACAAGCAG +
Preference number: 2 (lower is better)
Translates to: RREERGKIEVLLERG*PEVAWDRNPRENKQ
Trigger: CTGCTTGTTCTCCCGTGGATTCCTGTCCCAAGCTACCTCTGGCAACCCTCTCTCCAGCAAGACTTCTATTTTCCCTCTCTCCTCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
3UTR-3UTR TCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATACAGGCCCACGGGCCATaGTCTGCTGACCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: SKHREEQTAYFLLWWESIQAHGP*SADLCL
Trigger: CAGGCAGAGGTCAGCAGATCATGGCCCGTGGGCCTG...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTAAGACCAGCCCAGGGTaGGTCAGGCCAGCCCCGAGC +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSKTSPG*VRPAPS
Trigger: GCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTCTT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCCTGAAGGGCGGCCATaGGACAGAGGGACCAGGAAT +
Preference number: 2 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSPEGRP*DRGTRN
Trigger: ATTCCTGGTCCCTCTGTCTCATGGCCGCCCTTCAGG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAGTGATGATAACAGGATaGAACCCAAGACCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPVMITG*NPRPAQ
Trigger: CTGGGCTGGTCTTGGGTTCCATCCTGTTATCATCAC...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCATTTCTTCCTCATCTGTaGGACGTTATGGCACACACG +
Preference number: 2 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPFLPHL*DVMAHT
Trigger: CGTGTGTGCCATAACGTCCCACAGATGAGGAAGAAA...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCGGGCCATGATCTGCTaGCCTCTGCCTGAGAAAACA +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSRAMIC*PLPEKT
Trigger: TGTTTTCTCAGGCAGAGGTCAGCAGATCATGGCCCG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGATCAATTTGGTGAACTaGAGAGCTTTAAAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGINLVN*RALKGG
Trigger: TCCTCCTTTTAAAGCTCTGCAGTTCACCAAATTGAT...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACTCTTCCATCTCTTCTaGCTGGAAAAGGCATCAATA +
Preference number: 2 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPLFHLF*LEKASI
Trigger: TATTGATGCCTTTTCCAGCCAGAAGAGATGGAAGAG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCACTCCAGCACTAGCCTaGACCACAGAAGGAAGTCAT +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVTPALA*TTEGSH
Trigger: ATGACTTCCTTCTGTGGTCCAGGCTAGTGCTGGAGT...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 90 bp GTGGCAAGAAGAGAGCCAAGTAGACTCTTCACTGGAAACTGCTTATaGACAATTGCCCCAATGCCTGCAAATGCCTGTGCTGTGTTTTCA +
Preference number: 2 (lower is better)
Translates to: VARREPSRLFTGNCL*TIAPMPANACAVFS
Trigger: TGAAAACACAGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCAGTGAAGAGTCTACTTGGCTCTCTTCTTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTTTGCCAGAGGTAGCTTaGGACAGGAATCCACGGGAG +
Preference number: 2 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSLPEVA*DRNPRE
Trigger: CTCCCGTGGATTCCTGTCCCAAGCTACCTCTGGCAA...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAGGGAGGGGTACCCTGTaGACTTTATTTAGCAACCTA +
Preference number: 2 (lower is better)
Translates to: SKHREEQTAYFLLWWESIGRGTL*TLFSNL
Trigger: TAGGTTGCTAAATAAAGTCCACAGGGTACCCCTCCC...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCAGTTTGAGGCCAGCCTaGTCTACAAAAGTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVSLRPA*STKVSS
Trigger: GGAACTCACTTTTGTAGACCAGGCTGGCCTCAAACT...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 90 bp ATTAACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTaGGTGGGAGTCCATAAGGGAGAGTCAGATGGTCTCCAGGCATTA +
Preference number: 2 (lower is better)
Translates to: INFKAQGGTNCILSA*VGVHKGESDGLQAL
Trigger: TAATGCCTGGAGACCATCTGACTCTCCCTTATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACCCAAAAGCCTAGAATaGGCCATCCATTTAAAAATA +
Preference number: 2 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPPKSLE*AIHLKI
Trigger: TATTTTTAAATGGATGGCTCATTCTAGGCTTTTGGG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTGTGACAGAGCTGCCTaGATCAAATCAGTGGATGAA +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVCDRAA*IKSVDE
Trigger: TTCATCCACTGATTTGATGCAGGCAGCTCTGTCACA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTTTGGTCAAGTACCGATaGGAGGGGTGTCATTCCAGA +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSLVKYR*EGCHSR
Trigger: TCTGGAATGACACCCCTCCCATCGGTACTTGACCAA...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTGCACACACGTCTGTGTaGTCAGTCACTCTGTCTCAA +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSAHTSV*SVTLSQ
Trigger: TTGAGACAGAGTGACTGACCACACAGACGTGTGTGC...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAGATCTATTTGGTCCATaGCTATTGTTGGCTGACCTC +
Preference number: 2 (lower is better)
Translates to: SKHREEQTAYFLLWWESIDLFGP*LLLADL
Trigger: GAGGTCAGCCAACAATAGCCATGGACCAAATAGATC...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCAGGCTATCTTTCAATaGGATGAGTTCCATGCTTGG +
Preference number: 2 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSQAIFQ*DEFHAW
Trigger: CCAAGCATGGAACTCATCTCATTGAAAGATAGCCTG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTATCTTGCTGTACATGTaGCAGAGCTGCCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSILLYM*QSCLHQ
Trigger: TTGATGCAGGCAGCTCTGTCACATGTACAGCAAGAT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCAAAGTAAGTGGGTCTaGGGAAAATTAATCTGGGGG +
Preference number: 2 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSQSKWV*GKLIWG
Trigger: CCCCCAGATTAATTTTCCCCAGACCCACTTACTTTG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCAACAGGATCTCAAATaGATGGCTATTTCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVQQDLK*MAISLA
Trigger: AGCCAAGGAAATAGCCATCCATTTGAGATCCTGTTG...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCTTGGGACAAGCAAATaGGTGGCAAGTCTCAAATGC +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSLGTSK*VASLKC
Trigger: GCATTTGAGACTTGCCACCCATTTGCTTGTCCCAAG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTCTGTATGGTTTGCTTaGCCATTATCTTGCTGTACA +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVSVWFA*PLSCCT
Trigger: TGTACAGCAAGATAATGGTCAAGCAAACCATACAGA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGAAGGGAGTTTCCCATaGGTCATATATGAAAACATC +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVEGSFP*VIYENI
Trigger: GATGTTTTCATATATGACCCATGGGAAACTCCCTTC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTTACTTTCTGCTTTGGTaGGAGTCCATAAGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSYFLLW*ESIRES
Trigger: ACTCTCCCTTATGGACTCCCACCAAAGCAGAAAGTA...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCACACTGAGTTTATGGTaGACCAATTTTTCTTGTGGT +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVTLSLW*TNFSCG
Trigger: ACCACAAGAAAAATTGGTGCACCATAAACTCAGTGT...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGTACACTGAGTTTATaGTGCACCAATTTTTCTTGT +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGTLSL*CTNFSC
Trigger: ACAAGAAAAATTGGTGCACCATAAACTCAGTGTACC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGAAGTAATTGCTGTGTaGAAAGCATGTAGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVEVIAV*KACSCF
Trigger: AAAACAGCTACATGCTTTCCACACAGCAATTACTTC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCATTCAGGAAACTCTATaGAATACCTACTGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSIQETL*NTYCVS
Trigger: TGACACACAGTAGGTATTTCATAGAGTTTCCTGAAT...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCCTCCCACTCCATCCATaGTCTGAACACACCATCACT +
Preference number: 2 (lower is better)
Translates to: SSQLPDCLATNILVYKFPLPLHP*SEHTIT
Trigger: AGTGATGGTGTGTTCAGATCATGGATGGAGTGGGAG...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTATAGAATAGTGACTTaGAGGCAAAAGATGCTAATG +
Preference number: 2 (lower is better)
Translates to: NFKAQGGTNCILSALVGVYRIVT*RQKMLM
Trigger: CATTAGCATCTTTTGCCTGCAAGTCACTATTCTATA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTGGACTGAAGGAAGGTTaGATTATGCAAACTCTGATT +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSGLKEG*IMQTLI
Trigger: AATCAGAGTTTGCATAATGCAACCTTCCTTCAGTCC...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATGTTCTTGTTCCACTTaGCTTTTCCATAAGTCTAAA +
Preference number: 2 (lower is better)
Translates to: SKHREEQTAYFLLWWESICSCST*LFHKSK
Trigger: TTTAGACTTATGGAAAAGCCAAGTGGAACAAGAACA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCTGCATGCATGCTGCCTaGAAAAGGACTGAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SSQLPDCLATNILVYKFPCMHAA*KRTEGR
Trigger: CCTTCCTTCAGTCCTTTTCCAGGCAGCATGCATGCA...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR TCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTGAAGGCTTTAGTCACTaGCACAAACATTTTCATTTC +
Preference number: 2 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSEGFSH*HKHFHF
Trigger: GAAATGAAAATGTTTGTGTCAGTGACTAAAGCCTTC...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGCATACTTTCTGCTTTaGTGGGAGTCCATAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SSQLPDCLATNILVYKFPAYFLL*WESIRE
Trigger: CTCCCTTATGGACTCCCACCAAAGCAGAAAGTATGC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 90 bp ACTGAATCTTCTGTTGCCCCAATCTTGGTCTTCTCAGCTTCCAGATaGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: TESSVAPILVFSASR*SCYKYSCLQISQSK
Trigger: TTTACTCTGGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGACCAAGATTGGGGCAACAGAAGATTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGCCCCAGATTCAGACTaGTATCTTGTTTGCAGATTT +
Preference number: 2 (lower is better)
Translates to: SSQLPDCLATNILVYKFPAPDSD*YLVCRF
Trigger: AAATCTGCAAACAAGATAGCAGTCTGAATCTGGGGC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCAAGAGGCAAAGTAAGTaGGTCTGGGGAAAATTAATC +
Preference number: 2 (lower is better)
Translates to: SSQLPDCLATNILVYKFPKRQSK*VWGKLI
Trigger: GATTAATTTTCCCCAGACCCACTTACTTTGCCTCTT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCCCTGCATCAAATCAGTaGATGAACTACAGGACTAAT +
Preference number: 2 (lower is better)
Translates to: SSQLPDCLATNILVYKFPPASNQ*MNYRTN
Trigger: ATTAGTCCTGTAGTTCATCCACTGATTTGATGCAGG...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCACTTCTAAGCACATATaGTTCAGTTGTCTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: SSQLPDCLATNILVYKFPTSKHI*FSCLCV
Trigger: TACACAAAGACAACTGAAGCATATGTGCTTAGAAGT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp CGCTGGGCAAGGTTTCCGAGACCAGACGGCCTGGACTaGCCATTTCTCGGGGTGATGAAGTCCAAGTTTCAC +
Preference number: 3 (lower is better)
Translates to: RWARFPRPDGLD*PFLGVMKSKFH
Trigger: GTGAAACTTGGACTTCATCACCCCGAGAAATGGCCAGTCCAGGCCGTCTGGTCTCGGAAACCTTGCCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp GACATCTTTATCATCTTCTGCCTCCAACGTTCACGCTaGGCAAGGTTTCCGAGACCAGACGGCCTGGACTGG +
Preference number: 3 (lower is better)
Translates to: DIFIIFCLQRSR*ARFPRPDGLDW
Trigger: CCAGTCCAGGCCGTCTGGTCTCGGAAACCTTGCCCAGCGTGAACGTTGGAGGCAGAAGATGATAAAGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp GACTCTGGGCACACCTGGGACATCTTTATCATCTTCTaGCTCCAACGTTCACGCTGGGCAAGGTTTCCGAGA +
Preference number: 3 (lower is better)
Translates to: DSGHTWDIFIIF*LQRSRWARFPR
Trigger: TCTCGGAAACCTTGCCCAGCGTGAACGTTGGAGGCAGAAGATGATAAAGATGTCCCAGGTGTGCCCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTTGCTGGAGAGAGGGTaGCCAGAGGTAGCTTGGGAC +
Preference number: 3 (lower is better)
Translates to: NFKAQGGTNCILSALVGVLLERG*PEVAWD
Trigger: GTCCCAAGCTACCTCTGGCAACCCTCTCTCCAGCAA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp GAGAGTAACTGTTCTCAATTACCTGAAGGGCGGCCATaGGACAGAGGGACCAGGAATCTTCTAAGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: ESNCSQLPEGRP*DRGTRNLLRAS
Trigger: AGAGGCCCTTAGAAGATTCCTGGTCCCTCTGTCTCATGGCCGCCCTTCAGGTAATTGAGAACAGTTACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp CACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTaGGAGTCCATAAGGGAGAGTCAGATGGTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: HREEQTAYFLLW*ESIRESQMVSR
Trigger: CCTGGAGACCATCTGACTCTCCCTTATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGACTCTTTCTCTACACTaGCTTTCTTCCTCATCTGTG +
Preference number: 3 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGTLSLH*LSSSSV
Trigger: CACAGATGAGGAAGAAAGCAAGTGTAGAGAAAGAGT...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp TCTCCCTGTGAAAGCCAGCTGGCTCACCTCACTGTTTaGCATTTGCACCCACTCTCTTCTCAGCTATTATGG +
Preference number: 3 (lower is better)
Translates to: SPCESQLAHLTV*HLHPLSSQLLW
Trigger: CCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGGTGAGCCAGCTGGCTTTCACAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp TCTACACTTGCTTTCTTCCTCATCTGTGGGACGTTATaGCACACACGTCTGTGTGGTCAGTCACTCTGTCTC +
Preference number: 3 (lower is better)
Translates to: STLAFFLICGTL*HTRLCGQSLCL
Trigger: GAGACAGAGTGACTGACCACACAGACGTGTGTGCCATAACGTCCCACAGATGAGGAAGAAAGCAAGTGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp AAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTaGTGGGAGTCCATAAGGGAGAGTCAGATGGTCTCC +
Preference number: 3 (lower is better)
Translates to: KHREEQTAYFLL*WESIRESQMVS
Trigger: GGAGACCATCTGACTCTCCCTTATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTGTTGCCAGAGGTAGCTaGGGACAGGAATCCACGGGA +
Preference number: 3 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSVARGS*GQESTG
Trigger: TCCCGTGGATTCCTGTCCCAAGCTACCTCTGGCAAC...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAGCTCTGTAAACATCTaGCAGGTCTCTCTATTTGGC +
Preference number: 3 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPSSVNI*QVSLFG
Trigger: GCCAAATAGAGAGACCTGCAAGATGTTTACAGAGCT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp GAGAGCCAAGTAGACTCTTCACTGGAAACTGCTTATTaGCAATTGCCCCAATGCCTGCAAATGCCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: ESQVDSSLETAY*QLPQCLQMPVL
Trigger: CAGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCAGTGAAGAGTCTACTTGGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp CAATCTCACATGTGTGGACACCATCCAAGTTTTGCATaGATGCTGCCTGGAAAAGGACTGAAGGAAGGTTGC +
Preference number: 3 (lower is better)
Translates to: QSHMCGHHPSFA*MLPGKGLKEGC
Trigger: GCAACCTTCCTTCAGTCCTTTTCCAGGCAGCATGCATGCAAAACTTGGATGGTGTCCACACATGTGAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGTCCATGGCTATTGTaGGCTGACCTCTGTCTTAGA +
Preference number: 3 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGPWLL*ADLCLR
Trigger: TCTAAGACAGAGGTCAGCCAACAATAGCCATGGACC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCATCACGCATCTTAACCTaGCTATTTCCTCCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPSRILT*LFPPFK
Trigger: TTTGAAAGGAGGAAATAGCAAGGTTAAGATGCGTGA...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATTTGGTCCATGGCTATaGTTGGCTGACCTCTGTCTT +
Preference number: 3 (lower is better)
Translates to: SKHREEQTAYFLLWWESIFGPWL*LADLCL
Trigger: AAGACAGAGGTCAGCCAACAATAGCCATGGACCAAA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp GGTGTTTTGGTGGTCCAAGTTCTACTTCACAAGTGCTaGTACTCGGGGGTTAGTTACTCTAAGGAACCTCAG +
Preference number: 3 (lower is better)
Translates to: GVLVVQVLLHKC*YSGVSYSKEPQ
Trigger: CTGAGGTTCCTTAGAGTAACTAACCCCCGAGTATCAGCACTTGTGAAGTAGAACTTGGACCACCAAAACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp GTGAAAGCCAGCTGGCTCACCTCACTGTTTGACATTTaGACCCACTCTCTTCTCAGCTATTATGGTGAAAAG +
Preference number: 3 (lower is better)
Translates to: VKASWLTSLFDI*THSLLSYYGEK
Trigger: CTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGGTGAGCCAGCTGGCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp GCAAGAAGAGAGCCAAGTAGACTCTTCACTGGAAACTaGTTATTGACAATTGCCCCAATGCCTGCAAATGCC +
Preference number: 3 (lower is better)
Translates to: ARREPSRLFTGN*LLTIAPMPANA
Trigger: GGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCAGTGAAGAGTCTACTTGGCTCTCTTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTCATGTaGTGTGACATGGACAGAAAGAGAGATACAAATTCC +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCVSVM*CDMDRKRDTNS
Trigger: GGAATTTGTATCTCTCTTTCTGTCCATGTCACACCACATGACACTCACACACACACACACACACACACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAATCATATCATTTTCCTaGGGACAAGCAAATGGGTGG +
Preference number: 3 (lower is better)
Translates to: SKHREEQTAYFLLWWESIIISFS*GQANGW
Trigger: CCACCCATTTGCTTGTCCCAAGGAAAATGATATGAT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp CTCTTCTCAGCTATTATGGTGAAAAGCCAAGTCGAGTaGACCAAGCAACAAGATAATCAAACCTGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: LFSAIMVKSQVE*TKQQDNQTWAV
Trigger: GACAGCCCAGGTTTGATTATCTTGTTGCTTGGTTCACTCGACTTGGCTTTTCACCATAATAGCTGAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp ACTCTGATTAACTTCAAAGCACAGGGAGGAACAAACTaGATACTTTCTGCTTTGGTGGGAGTCCATAAGGGA +
Preference number: 3 (lower is better)
Translates to: TLINFKAQGGTN*ILSALVGVHKG
Trigger: TCCCTTATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTTAATCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp CCATATCACTCTAATCAACTCTGTTGTTCCCTTTCTTaGGTGGCAAGAAGAGAGCCAAGTAGACTCTTCACT +
Preference number: 3 (lower is better)
Translates to: PYHSNQLCCSLS*VARREPSRLFT
Trigger: AGTGAAGAGTCTACTTGGCTCTCTTCTTGCCACGCAAGAAAGGGAACAACAGAGTTGATTAGAGTGATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp TCTCACCAGACACTGAATCTTCTGTTGCCCCAATCTTaGTCTTCTCAGCTTCCAGATTGTCTTGCTACAAAT +
Preference number: 3 (lower is better)
Translates to: SHQTLNLLLPQS*SSQLPDCLATN
Trigger: ATTTGTAGCAAGACAATCTGGAAGCTGAGAAGACCAAGATTGGGGCAACAGAAGATTCAGTGTCTGGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp ATCACTCTAATCAACTCTGTTGTTCCCTTTCTTGCGTaGCAAGAAGAGAGCCAAGTAGACTCTTCACTGGAA +
Preference number: 3 (lower is better)
Translates to: ITLINSVVPFLA*QEESQVDSSLE
Trigger: TTCCAGTGAAGAGTCTACTTGGCTCTCTTCTTGCCACGCAAGAAAGGGAACAACAGAGTTGATTAGAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp TGTGTGTGTGTGTGTGTGTGTGAGTGTCATGTGGTGTaGCATGGACAGAAAGAGAGATACAAATTCCAAAAG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCECHVV*HGQKERYKFQK
Trigger: CTTTTGGAATTTGTATCTCTCTTTCTGTCCATGTCACACCACATGACACTCACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp TGGCTGACCTCTGTCTTAGAAAATAACAGTATACTGTaGCTTAAGAATGTCAATGGAGCTAGGTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: WLTSVLENNSIL*LKNVNGARWWW
Trigger: CCACCACCACCTAGCTCCATTGACATTCTTAAGTCACAGTATACTGTTATTTTCTAAGACAGAGGTCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp CATCAAGGGTTCTGCCTGTTTAACATTCAGTCAGGTTaGAATGGATCTGAAGTCATGATATATGAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: HQGFCLFNIQSG*NGSEVMIYEGQ
Trigger: CTGCCCTTCATATATCATGACTTCAGATCCATTTCAACCTGACTGAATGTTAAACAGGCAGAACCCTTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp CATGGACCTGATCTATGTATATCATATCATTTTCCTTaGGACAAGCAAATGGGTGGCAAGTCTCAAATGCAG +
Preference number: 3 (lower is better)
Translates to: HGPDLCISYHFP*DKQMGGKSQMQ
Trigger: CTGCATTTGAGACTTGCCACCCATTTGCTTGTCCCAAGGAAAATGATATGATATACATAGATCAGGTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTATCTGTATGGTTTGCTaGACCATTATCTTGCTGTAC +
Preference number: 3 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSICMVC*TIILLY
Trigger: GTACAGCAAGATAATGGTCAAGCAAACCATACAGAT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGACACCATCCAAGTTTaGCATGCATGCTGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: SSQLPDCLATNILVYKFPDTIQV*HACCLE
Trigger: TTCCAGGCAGCATGCATGCAAAACTTGGATGGTGTC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTACAAATAACAAACAATaGTCATGGGACATGCGTAGA +
Preference number: 3 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSTNNKQ*SWDMRR
Trigger: TCTACGCATGTCCCATGACAATTGTTTGTTATTTGT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp AAACTGCTTATTGACAATTGCCCCAATGCCTGCAAATaGCTGTGCTGTGTTTTCAATGTCTGTATCTCTAAA +
Preference number: 3 (lower is better)
Translates to: KLLIDNCPNACK*LCCVFNVCISK
Trigger: TTTAGAGATACAGACATTGAAAACACAGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCATATATGAAGGGCAGTaGGAGGAACTGCCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: SSQLPDCLATNILVYKFPIYEGQ*EELPVK
Trigger: TTTCACAGGCAGTTCCTCCAACTGCCCTTCATATAT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR-3UTR CAA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGCAGAGACATTGTTCTaGTTCCACTTGGCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: SSQLPDCLATNILVYKFPAETLF*FHLAFP
Trigger: TGGAAAAGCCAAGTGGAACAAGAACAATGTCTCTGC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp GGCCTAGTCTGTAGTCTAAGCAATGTAAGCCTTCTGTaGAATATGGATATTTTGGAAGCTAATATATGGAGT +
Preference number: 3 (lower is better)
Translates to: GLVCSLSNVSLL*NMDILEANIWS
Trigger: ACTCCATATATTAGCTTCCAAAATATCCATATTGCACAGAAGGCTTACATTGCTTAGACTACAGACTAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp ATAAGGAAAAGATTCAAGATGACTCCAGCACTAGCCTaGACCACAGAAGGAAGTCATGGATTCTTATTTTAT +
Preference number: 3 (lower is better)
Translates to: IRKRFKMTPALA*TTEGSHGFLFY
Trigger: ATAAAATAAGAATCCATGACTTCCTTCTGTGGTCCAGGCTAGTGCTGGAGTCATCTTGAATCTTTTCCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp AATTCCATAGATCAGAGATCAGAAGGGAGTTTCCCATaGGTCATATATGAAAACATCTCAGACATACTATGC +
Preference number: 3 (lower is better)
Translates to: NSIDQRSEGSFP*VIYENISDILC
Trigger: GCATAGTATGTCTGAGATGTTTTCATATATGACCCATGGGAAACTCCCTTCTGATCTCTGATCTATGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp GAGAAAAGGTCTCAATTTATTGGTACACTGAGTTTATaGTGCACCAATTTTTCTTGTGGTCTTGGTTGCACT +
Preference number: 3 (lower is better)
Translates to: EKRSQFIGTLSL*CTNFSCGLGCT
Trigger: AGTGCAACCAAGACCACAAGAAAAATTGGTGCACCATAAACTCAGTGTACCAATAAATTGAGACCTTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp GTTGGAAGAAGTCACTACATACCCAAAAGCCTAGAATaGGCCATCCATTTAAAAATATGTGCAGCAAAGATT +
Preference number: 3 (lower is better)
Translates to: VGRSHYIPKSLE*AIHLKICAAKI
Trigger: AATCTTTGCTGCACATATTTTTAAATGGATGGCTCATTCTAGGCTTTTGGGTATGTAGTGACTTCTTCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp AAGTGTGTGGTTGTGTTCCAAGAAGGCTTTAGTCACTaGCACAAACATTTTCATTTCTTGTCACTTTCACTT +
Preference number: 3 (lower is better)
Translates to: KCVVVFQEGFSH*HKHFHFLSLSL
Trigger: AAGTGAAAGTGACAAGAAATGAAAATGTTTGTGTCAGTGACTAAAGCCTTCTTGGAACACAACCACACACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp TCGAAAGTAAAGATCTATTTGGTCCATGGCTATTGTTaGCTGACCTCTGTCTTAGAAAATAACAGTATACTG +
Preference number: 3 (lower is better)
Translates to: SKVKIYLVHGYC*LTSVLENNSIL
Trigger: CAGTATACTGTTATTTTCTAAGACAGAGGTCAGCCAACAATAGCCATGGACCAAATAGATCTTTACTTTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp GTGTCTACCCACAACCACAACAGGATCTCAAATGGATaGCTATTTCCTTGGCTTATGAAACTTTTTATATAT +
Preference number: 3 (lower is better)
Translates to: VSTHNHNRISNG*LFPWLMKLFIY
Trigger: ATATATAAAAAGTTTCATAAGCCAAGGAAATAGCCATCCATTTGAGATCCTGTTGTGGTTGTGGGTAGACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp TATGTATATCATATCATTTTCCTTGGGACAAGCAAATaGGTGGCAAGTCTCAAATGCAGAAGTAATTGCTGT +
Preference number: 3 (lower is better)
Translates to: YVYHIIFLGTSK*VASLKCRSNCC
Trigger: ACAGCAATTACTTCTGCATTTGAGACTTGCCACCCATTTGCTTGTCCCAAGGAAAATGATATGATATACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR TCA 72 bp CTTATCCAAGTTATGACTCATTCTACAAAACTGATCTaGACTCTTCAGAAATGTCAATACAGTGAGGACCAA +
Preference number: 3 (lower is better)
Translates to: LIQVMTHSTKLI*TLQKCQYSEDQ
Trigger: TTGGTCCTCACTGTATTGACATTTCTGAAGAGTTCAGATCAGTTTTGTAGAATGAGTCATAACTTGGATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR GCA 72 bp TTCATAGCTGCTCTCCCTGAATATAGAATAGTGACTTaGAGGCAAAAGATGCTAATGAGTAATCTATTGAAT +
Preference number: 3 (lower is better)
Translates to: FIAALPEYRIVT*RQKMLMSNLLN
Trigger: ATTCAATAGATTACTCATTAGCATCTTTTGCCTGCAAGTCACTATTCTATATTCAGGGAGAGCAGCTATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CCA 72 bp AACCACAACAGGATCTCAAATGGATGGCTATTTCCTTaGCTTATGAAACTTTTTATATATGACCAGGAAATG +
Preference number: 3 (lower is better)
Translates to: NHNRISNGWLFP*LMKLFIYDQEM
Trigger: CATTTCCTGGTCATATATAAAAAGTTTCATAAGCCAAGGAAATAGCCATCCATTTGAGATCCTGTTGTGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCACGGCAGAAGGGCTGCTaGGGTAGGAAGACTGCAACA +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSRQKGC*GRKTAT
Trigger: TGTTGCAGTCTTCCTACCCCAGCAGCCCTTCTGCCG...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCACTCTACGCCGCTGCTTaGTCTCATGACAGAGCGACT +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSLYAAA*SHDRAT
Trigger: AGTCGCTCTGTCATGAGATCAAGCAGCGGCGTAGAG...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCACTCCAGCACATTGGCTaGGTCTCCCATTTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSLQHIG*VSHLWV
Trigger: GACCCACAAATGGGAGACGCAGCCAATGTGCTGGAG...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCACGTCATCCTCATCTTTaGGACACAGCTCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSRHPHL*DTALLP
Trigger: CGGAAGAAGAGCTGTGTCTCAAAGATGAGGATGACG...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCAGCAATGTGGGCTGCGTaGGAGAGTCCTCGTTATAAT +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSAMWAA*ESPRYN
Trigger: ATTATAACGAGGACTCTCCCACGCAGCCCACATTGC...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCAACCATCTCCTTCCTTTaGATCATCAGCTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSTISFL*IISSLL
Trigger: CAGAAGGGAGCTGATGATGCAAAGGAAGGAGATGGT...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCATTACGAGCTTCTCTTTaGAGGTTAAAGTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSLRASL*RLKFGG
Trigger: GCCCCCAAACTTTAACCTGCAAAGAGAAGCTCGTAA...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAGGCATCAGTCGCCATaGGGTCTGGGTCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPRHQSP*GLGPGT
Trigger: GGTCCCAGGACCCAGACCCCATGGCGACTGATGCCT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGGTCTCAAGGAGGGCATaGATCTGCTCCACGTGGTCG +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGVSRRA*ICSTWS
Trigger: CGACCACGTGGAGCAGATCCATGCCCTCCTTGAGAC...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAGGGCCCGACCCACTGTaGCCTGCCATTGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPGPDPL*PAIVSC
Trigger: ACAGGACACAATGGCAGGCCACAGTGGGTCGGGCCC...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGCTGAGGGGAAAGTCCTaGAAGAGGCACCGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGLRGKS*KRHRVC
Trigger: ACAGACACGGTGCCTCTTTCAGGACTTTCCCCTCAG...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAGGGACGGGGTGCTTCTaGTCAGCTCAGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPGTGCF*SAQASG
Trigger: ACCTGAAGCCTGAGCTGAGCAGAAGCACCCCGTCCC...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGATCCTGACCTCCAGCTaGCTTACCAGGCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGILTSS*LTRLPL
Trigger: AAGCGGAAGCCTGGTAAGGCAGCTGGAGGTCAGGAT...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGTGCCACTGGACAGCTTaGATGACGATGGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGCHWTA*MTMASH
Trigger: GTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCA...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACCTGACCGTTCTGTGTaGCGTGACATGGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPPDRSV*RDMERV
Trigger: CACCCGCTCCATGTCACGCCACACAGAACGGTCAGG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCAGATTTTGTAGCAGAATaGCTCTCATTCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: DQPRVGQASPELQPGYLSDFVAE*LSFFSE
Trigger: CTCTGAGAAGAATGAGAGCCATTCTGCTACAAAATC...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAAGAGAGCAGGTCACGTaGGCCCGACCCACTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIREQVT*ARPTVA
Trigger: GGCCACAGTGGGTCGGGCCCACGTGACCTGCTCTCT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAGTCACGGACCCTCTCTaGGGTCATCCGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIVTDPL*GHPEPG
Trigger: ACCTGGCTCCGGATGACCTCAGAGAGGGTCCGTGAC...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGTCCGTTTGTTTGAGGTaGGATGGCAGCGCTAGGTAT +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGSVCLR*DGSARY
Trigger: ATACCTAGCGCTGCCATCTCACCTCAAACAAACGGA...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACTTCTTCCGTCAAGGTaGGAGTGGAGCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPLLPSR*EWSWRG
Trigger: TCCTCTCCAGCTCCACTCTCACCTTGACGGAAGAAG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAGAGTCCACGGTGTCTaGTGGCAATGGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPRVHGV*WQWGVA
Trigger: AGCAACACCCCATTGCCACCAGACACCGTGGACTCT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAAGTCGTCCACTTCTGTaGGGGAGTCAAGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESISRPLL*GSQAGP
Trigger: AGGGCCGGCTTGACTCCCTCACAGAAGTGGACGACT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACTGAAACACTCCGCTTaGTCTTTTGCTCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPLKHSA*SFALRG
Trigger: GCCCCTCAGAGCAAAAGATCAAGCGGAGTGTTTCAG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGTGTTGCCGTTTGATTTaGCTCTGCAGCTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGCCRLI*LCSSFH
Trigger: ATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACA...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGTTTCGTAACCGTGTTTaGCACTGGACAGCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGFRNRV*HWTACM
Trigger: CATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAA...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGGTCATGAGTTCTGGGTaGGTTCTTGCCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGVMSSG*VLAIPI
Trigger: AATGGGAATGGCAAGAACCCACCCAGAACTCATGAC...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTGATACGCGGAGCTGGTaGCAGAGCAGCTGCACTGCG +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSDTRSW*QSSCTA
Trigger: CGCAGTGCAGCTGCTCTGGCACCAGCTCCGCGTATC...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGTCTTCAGAGAATGCTTaGAGAATGTCAGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGSSENA*RMSVCL
Trigger: CAGGCAGACTGACATTCTGCAAGCATTCTCTGAAGA...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGGGCCCAGATTCAATaGTCTCCCCGAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGAQIQ*SPREMR
Trigger: CCTCATCTCTCGGGGAGAGCATTGAATCTGGGCCCC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGCAATTCCACTCTCACTaGCTGAATTCTGGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGQFHSH*LNSGSS
Trigger: ACTTGAGCCAGAATTCAGGCAGTGAGAGTGGAATTG...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCATCTCCTCTGGGTTTCTaGGGTAGAAGCTTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPSPLGF*GRSLVR
Trigger: CCTAACCAAGCTTCTACCCCAGAAACCCAGAGGAGA...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTAGACGTCTCCAGTGTTaGGCCCAGCTGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSRRLQC*AQLLSR
Trigger: CCTGGAGAGCAGCTGGGCTCAACACTGGAGACGTCT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCGTGACTACAAGGGGATaGGCTGGAGGCCTTCGACTG +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSVTTRG*AGGLRL
Trigger: CAGTCGAAGGCCTCCAGCTCATCCCCTTGTAGTCAC...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCATTCAGTCCTGCTTTGTaGGACGCAATGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPFSPAL*DAMSSR
Trigger: TCTTGAGCTCATTGCGTCTCACAAAGCAGGACTGAA...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGTTGCAGAGTGATATCTaGAACACTCCGCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGLQSDI*NTPLDL
Trigger: AAGATCAAGCGGAGTGTTTCAGATATCACTCTGCAA...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAAATCTTCCAGTCGGCTaGTGTGTGGAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESINLPVG*CVEWRW
Trigger: CCACCTCCACTCCACACAGCAGCCGACTGGAAGATT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATTGGGCAATGTGGGCTaGGTGGGAGAGTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESILGNVG*VGESSL
Trigger: TAACGAGGACTCTCCCACGCAGCCCACATTGCCCAA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGGATCCTCCAAATGTaGCTTCTCACTCTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGILQM*LLTLRL
Trigger: CAGCCGCAGAGTGAGAAGGCACATTTGGAGGATCCC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGCTGCTGTGTGGAGTaGAGGTGGCTTTCCATACTG +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGCCVE*RWLSIL
Trigger: CAGTATGGAAAGCCACCTCCACTCCACACAGCAGCC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCAGTCGGCTGCTGTGTaGAGTGGAGGTGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSQSAAV*SGGGFP
Trigger: TGGAAAGCCACCTCCACTCCACACAGCAGCCGACTG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTACGGATACGCGGAGCTaGTGCCAGAGCAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSTDTRS*CQSSCT
Trigger: AGTGCAGCTGCTCTGGCACCAGCTCCGCGTATCCGT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACGCGGATGGATCTCTTaGGAGTCATCATTTCACAAG +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPRGWIS*ESSFHK
Trigger: CTTGTGAAATGATGACTCCCAAGAGATCCATCCGCG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAATGAGGCTATGTCGCTaGATGAGCTCGGAGAGACGG +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIMRLCR*MSSERR
Trigger: CCGTCTCTCCGAGCTCATCCAGCGACATAGCCTCAT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCGGCACAACCTCAGAATaGAGGCCACTCCTCTACGCC +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSGTTSE*RPLLYA
Trigger: GGCGTAGAGGAGTGGCCTCCATTCTGAGGTTGTGCC...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAAACAAATCACCCCCTaGGGAAAGGGACTCTACAGA +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPKQITP*GKGLYR
Trigger: TCTGTAGAGTCCCTTTCCCCAGGGGGTGATTTGTTT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACAATCCCAGAGCTCCTaGTATTCTGAATCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPQSQSS*YSESKS
Trigger: GGACTTTGATTCAGAATATCAGGAGCTCTGGGATTG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCATTTCAAGGTTTACAATaGTCAGCTGCATGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPFQGLQ*SAAWAG
Trigger: ACCAGCCCATGCAGCTGATCATTGTAAACCTTGAAA...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCACTGGACAGCTTGCATaGCGATGGCTTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSTGQLA*RWLPTF
Trigger: GAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGT...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAGCTGCACTGTGCCTGTaGACTTGGGGCTGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIAALCL*TWGCFL
Trigger: TAAAAAGCAGCCCCAAGTTCACAGGCACAGTGCAGC...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCATGGGAATTTGAGTTTTaGGCCTTGGAGGTACGAGTA +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPWEFEF*ALEVRV
Trigger: TACTCGTACCTCCAAGGCTCAAAACTCAAATTCCCA...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTGCTTTGCAGAGTaGTATCTGAAACACTCCGCT +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPNCFAE*YLKHSA
Trigger: AGCGGAGTGTTTCAGATATCACTCTGCAAAGCAGTT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTGCAGACCTTGTAGGATaGGCTCCCGGAGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSADLVG*APGGPA
Trigger: TGCTGGTCCTCCGGGAGCGCATCCTACAAGGTCTGC...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTTGGCGGCAGAAGGGCTaGTGGGGTAGGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSWRQKG*WGRKTA
Trigger: TGCAGTCTTCCTACCCCAGCAGCCCTTCTGCCGCCA...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATACGGTCATCCAGAAGGTaGTGGCACAACCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIRSSRR*WHNLRM
Trigger: CATTCTGAGGTTGTGCCAGCACCTTCTGGATGACCG...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATACGTCTTCGTCATCAGTaGAAGCAGAGGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIRLRHQ*KQRCRR
Trigger: TCTCCTGCACCTCTGCTTGCACTGATGACGAAGACG...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTTGGCTGCTCCACAGCTaGAAGGGACAGGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSWLLHS*KGQAQW
Trigger: CCACTGAGCCTGTCCCTTCCAGCTGTGGAGCAGCCA...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTACTCATAGGACTGGCTaGCGGCAGAAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSTHRTG*RQKGCW
Trigger: CCAGCAGCCCTTCTGCCGCCAGCCAGTCCTATGAGT...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp AAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTaGGTGGGAGTCCATAAGGGAGAGTCAGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: KAQGGTNCILSA*VGVHKGESDGL
Trigger: GAGACCATCTGACTCTCCCTTATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCAAGGATCACTTGAGATaGGTCCTCATTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVKDHLR*VLIGCS
Trigger: GGAGCAGCCAATGAGGACTCATCTCAAGTGATCCTT...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATCATCAGCTCCCTTCTaGGGGGAAAGTCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESISSAPF*GESPER
Trigger: TCTTTCAGGACTTTCCCCTCAGAAGGGAGCTGATGA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTGGTGGCTTTCCATACTaGTGCTCAGCACCCACGTCC +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSGGFPY*CSAPTS
Trigger: GGACGTGGGTGCTGAGCAGCAGTATGGAAAGCCACC...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCACATGCTTGCTGTCTaGATCCTGCTGGACCGAGTA +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSHMLAV*ILLDRV
Trigger: TACTCGGTCCAGCAGGATGCAGACAGCAAGCATGTG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATACAAGAGAGGACTCACTaGTGTGACTACAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIQERTH*CDYKGM
Trigger: CATCCCCTTGTAGTCACAGCAGTGAGTCCTCTCTTG...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCATCTGGCTTGCAGTTaGAACAGGAAGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSHLACS*NRKCCC
Trigger: GCAGCAGCACTTCCTGTTGCAACTGCAAGCCAGATG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGGGGGTGGTAGGCTCTaGGCTCTCCACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPGGGRL*ALHTAL
Trigger: CAGGGCTGTGTGGAGAGCGCAGAGCCTACCACCCCC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAGAATGTCAGTCTGCCTaGTGTAGTTGCCATTGGCGT +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIECQSA*CSCHWR
Trigger: ACGCCAATGGCAACTACACCAGGCAGACTGACATTC...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGTGTGGCTGTCCTCGTaGAACTCAACATTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVVWLSS*NSTLWR
Trigger: TCTCCACAATGTTGAGTTCCACGAGGACAGCCACAC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACAGAGAGACGTTTTATaGAGCAATTTAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPQRDVL*SNLEGP
Trigger: AGGCCCTTCTAAATTGCTCCATAAAACGTCTCTCTG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTCCTTGAGGGCACAGTaGCTGTCTACGTTCAACTTA +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVSLRAQ*LSTFNL
Trigger: TAAGTTGAACGTAGACAGTCACTGTGCCCTCAAGGA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTGCAGCTCCTTCCATTaGCTTGCAATCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVCSSFH*LAIIFS
Trigger: GCTGAAGATGATTGCAAGTCAATGGAAGGAGCTGCA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGTGAGACAGATGCCTaGGAGACACTTGAAAGCTTA +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGETDA*ETLESL
Trigger: TAAGCTTTCAAGTGTCTCTCAGGCATCTGTCTCACC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTGGGCGCGTCTGGTTGTaGCTCAGAAGTCTGATGTTT +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSGRVWL*LRSLMF
Trigger: AAACATCAGACTTCTGAGTCACAACCAGACGCGCCC...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATACTTGATCTTTTGCTCTaGGGGGCTCTGTATGTTCTC +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESILDLLL*GALYVL
Trigger: GAGAACATACAGAGCCCCTCAGAGCAAAAGATCAAG...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATCTATGTAATTGGTaGCCTCCCCACAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVHLCNW*PPHSHC
Trigger: ACAGTGACTGTGGGGAGGTCACCAATTACATAGATG...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCGACCCACTGTGGCCTaGCATTGTGTCCTGTATCTT +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSRPTVA*HCVLYL
Trigger: AAGATACAGGACACAATGGCAGGCCACAGTGGGTCG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAGTTAAAACAGTGGGCTaGACTGTGCCTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIVKTVG*TVPVNL
Trigger: CAAGTTCACAGGCACAGTGCAGCCCACTGTTTTAAC...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATCATGTCCACCTCTGTaGTCCTCTGAAAGGATCACT +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESISCPPL*SSERIT
Trigger: AGTGATCCTTTCAGAGGACCACAGAGGTGGACATGA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTCCTCTTGCTACCACTaGTATACTGCTCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVSSCYH*YTARCT
Trigger: TGTACAGCGAGCAGTATACCAGTGGTAGCAAGAGGA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATGTCGGAGTTGGTTaGCATCTCATTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVHVGVG*HLIVSF
Trigger: GAAGGAGACAATGAGATGCCAACCAACTCCGACATG...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATCCGTTGCGATACTaGAGTCGTCATCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVHPLRY*SRHPHL
Trigger: AAGATGAGGATGACGACTCCAGTATCGCAACGGATG...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATTGCAGGTTAAAGTTTaGGGGCTGGGATACAGTGCA +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESILQVKV*GLGYSA
Trigger: TGCACTGTATCCCAGCCCCCAAACTTTAACCTGCAA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp CAGAGCAAAGGATCTCACCAGACACTGAATCTTCTGTaGCCCCAATCTTGGTCTTCTCAGCTTCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: QSKGSHQTLNLL*PQSWSSQLPDC
Trigger: ACAATCTGGAAGCTGAGAAGACCAAGATTGGGGCAACAGAAGATTCAGTGTCTGGTGAGATCCTTTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp AGAGAGCCAAGTAGACTCTTCACTGGAAACTGCTTATaGACAATTGCCCCAATGCCTGCAAATGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: REPSRLFTGNCL*TIAPMPANACA
Trigger: AGCACAGGCATTTGCAGGCATTGGGGCAATTGTCAATAAGCAGTTTCCAGTGAAGAGTCTACTTGGCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCATAGGCTCCAGGTCTTaGTCAAGGTCGTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSIGSRS*SRSLDS
Trigger: AGAATCCAACGACCTTGATCAAGACCTGGAGCCTAT...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTAGATGCACATCCACATaGTTGCTGTCTGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSRCTST*LLSASC
Trigger: GCAGGATGCAGACAGCAAGCATGTGGATGTGCATCT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAAACTTTCTAAAGAAGTaGTTCGCTGGAGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESINFLKK*FAGGCH
Trigger: GTGACAGCCTCCAGCGAAGCACTTCTTTAGAAAGTT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCCAATCTGTGGAGGATaGCTATCATTTGGGGGACCA +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSPICGG*LSFGGP
Trigger: TGGTCCCCCAAATGATAGGCATCCTCCACAGATTGG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCGGAAAACATCTGGCTTaGAGTTGCAACAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSGKHLA*SCNRKC
Trigger: GCACTTCCTGTTGCAACTGCAAGCCAGATGTTTTCC...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTGACATCATCAGGTCGTaGCTGTCCATCACAAGGGAC +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSDIIRS*LSITRD
Trigger: GTCCCTTGTGATGGACAGCCACGACCTGATGATGTC...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTTTTGCTCCAGCACATTaGCTGCGTCTCCCATTTGTG +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSFAPAH*LRLPFV
Trigger: CACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAA...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCTGGTGTCCAGGGCTCTaGGAATCCAGCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPWCPGL*ESSCVA
Trigger: GGCAACACAGCTGGATTCTCAGAGCCCTGGACACCA...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTCTGCTTTTTAGAAACTaGGTGTGGCTGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSLLFRN*VWLSSW
Trigger: CCACGAGGACAGCCACACTCAGTTTCTAAAAAGCAG...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATACAAATTCCTTCCCAGTaGCACTTGAATCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIQIPSQ*HLNHQN
Trigger: GTTCTGATGATTCAAGTGTCACTGGGAAGGAATTTG...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCCCCTCTCCTTCCTCCTaGTCCACGGTAGGTGTCATG +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPPSPSS*STVGVM
Trigger: CATGACACCTACCGTGGAGCAGGAGGAAGGAGAGGG...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCTGGTGCCAGAGCAGCTaGACTGCGTGGATGTCTACG +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPWCQSS*TAWMST
Trigger: CGTAGACATCCACGCAGTGCAGCTGCTCTGGCACCA...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTAGAATCCAGCTGTGTTaGCGTTTGATTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSRIQLC*RLICLC
Trigger: GCAGAGGCAAATCAAACGGCAACACAGCTGGATTCT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAAATTTCATCATCCGTTaGGATACTGGAGTCGTCATC +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESINFIIR*DTGVVI
Trigger: GATGACGACTCCAGTATCGCAACGGATGATGAAATT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCATGGGCCGATGCGAATaGTCTAACACTTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSMGRCE*SNTFSL
Trigger: TAAGGAGAAAGTGTTAGAGCATTCGCATCGGCCCAT...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTTGGTGTAGTTGCCATTaGCGTCCTGCAGACCTTGTA +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSWCSCH*RPADLV
Trigger: TACAAGGTCTGCAGGACGCCAATGGCAACTACACCA...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCAAGCAGATCCTCACTTaGACTGTAGTCAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: NFKAQGGTNCILSALVGVKQILT*TVVRKF
Trigger: GAACTTTCTGACTACAGTCCAAGTGAGGATCTGCTT...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCTGATGGAAAACATCTaGCTTGCAGTTGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSLMENI*LAVATG
Trigger: TCCTGTTGCAACTGCAAGCCAGATGTTTTCCATCAG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp GAAAGAGAAGCTTGCATGTTCTATGTCCCATTGACTTaGCAGTCTATTGGCCTCTTAGAGAATGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: EREACMFYVPLT*QSIGLLENGIR
Trigger: CCTGATGCCATTCTCTAAGAGGCCAATAGACTGCAAAGTCAATGGGACATAGAACATGCAAGCTTCTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp ATCTCACCAGACACTGAATCTTCTGTTGCCCCAATCTaGGTCTTCTCAGCTTCCAGATTGTCTTGCTACAAA +
Preference number: 4 (lower is better)
Translates to: ISPDTESSVAPI*VFSASRLSCYK
Trigger: TTTGTAGCAAGACAATCTGGAAGCTGAGAAGACCAAGATTGGGGCAACAGAAGATTCAGTGTCTGGTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTGAGGACTCACTGCTGTaGCTACAAGGGGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSEDSLL*LQGDEL
Trigger: CAGCTCATCCCCTTGTAGTCACAGCAGTGAGTCCTC...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTCTTTGTGAGACGCAATaGGCTCAAGAAGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSLCETQ*AQEVGV
Trigger: GACACCAACTTCTTGAGCTCATTGCGTCTCACAAAG...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCTTGCCATTGGCGTCCTaGAGACCTTGTAGGATGCGC +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPLPLAS*RPCRMR
Trigger: GCGCATCCTACAAGGTCTGCAGGACGCCAATGGCAA...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCTATGTTTTCAAGATTaGCGATCCCCACCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSLCFQD*RSPPCA
Trigger: TGCACAAGGTGGGGATCGGCAATCTTGAAAACATAG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCGAGTACTTTCAACATTaGCATTTTCCATGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSEYFQH*HFPCRP
Trigger: TGGCCGACATGGAAAATGGCAATGTTGAAAGTACTC...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAGCCTTTTGGCTGTTTTaGATTCAAAGAGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESIAFWLF*IQRESL
Trigger: CAAGCTTTCTCTTTGAATGCAAAACAGCCAAAAGGC...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCTCTTTTGGGCAATGTaGGCTGCGTGGGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSLFWAM*AAWESP
Trigger: AGGACTCTCCCACGCAGCCCACATTGCCCAAAAGAG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCAGTCATCAATATCCTaGATAGTCTCTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSQSSIS*IVSPLG
Trigger: ACCCAGAGGAGAGACTATCCAGGATATTGATGACTG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp CTGGGCTGTCACAGGCCCCAGATTCAGACTGCTATCTaGTTTGCAGATTTGTTGAATAACAAACAAACAAAC +
Preference number: 4 (lower is better)
Translates to: LGCHRPQIQTAI*FADLLNNKQTN
Trigger: GTTTGTTTGTTTGTTATTCAACAAATCTGCAAACAAGATAGCAGTCTGAATCTGGGGCCTGTGACAGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCAGCTGTGTTGCCGTTTaGTTTGCCTCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPSCVAV*FASAAP
Trigger: AGGAGCTGCAGAGGCAAATCAAACGGCAACACAGCT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTTACACAACCCACTGGTaGGACAGATGCCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSYTTHW*DRCLRD
Trigger: GTCTCTCAGGCATCTGTCTCACCAGTGGGTTGTGTA...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCCTTTATTTCATCAGTaGCACTGGGCCGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSPLFHQ*HWAVSF
Trigger: AAAAGAAACGGCCCAGTGTCACTGATGAAATAAAGG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTTGTGCCTTCTCACTCTaGGGCTGTTTCATTATCATT +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSCAFSL*GCFIII
Trigger: AATGATAATGAAACAGCCGCAGAGTGAGAAGGCACA...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCTCCTTTTCTCTCTCTaGAGTACTTTCAACATTGCC +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSLLFSL*STFNIA
Trigger: GGCAATGTTGAAAGTACTCCAGAGAGAGAAAAGGAG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCCTTCCTCAGGTGTATaGGCCGATGCGAATGCTCTA +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSPSSGV*ADANAL
Trigger: TAGAGCATTCGCATCGGCCCATACACCTGAGGAAGG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCATTTGGAAGGGCACTaGAGAGACGGGCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSHLEGH*RDGLPH
Trigger: ATGAGGAAGCCCGTCTCTCCAGTGCCCTTCCAAATG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCCTTGAATTTTCGGTTTaGCTGAAGCAGCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSLEFSV*LKQRFL
Trigger: AAGAAAACGCTGCTTCAGCCAAACCGAAAATTCAAG...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp AAACTAGAAAGAGAAGCTTGCATGTTCTATGTCCCATaGACTTTGCAGTCTATTGGCCTCTTAGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: KLEREACMFYVP*TLQSIGLLENG
Trigger: GCCATTCTCTAAGAGGCCAATAGACTGCAAAGTCAATGGGACATAGAACATGCAAGCTTCTCTTTCTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp TCAGATGGTCTCCAGGCATTATTAATCAGCATGCCATaGCTCAAGAAACCTATCATGGACCTGATCTATGTA +
Preference number: 4 (lower is better)
Translates to: SDGLQALLISMP*LKKPIMDLIYV
Trigger: TACATAGATCAGGTCCATGATAGGTTTCTTGAGCAATGGCATGCTGATTAATAATGCCTGGAGACCATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCATAGATTTCAGAGTCTaGATTCATCTCAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSIDFRV*IHLRQF
Trigger: GAACTGTCTGAGATGAATTCAGACTCTGAAATCTAT...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTAGCTGCATGGGCTGGTaGTCTGCGTTCAGATTACAA +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSSCMGW*SAFRLQ
Trigger: TTGTAATCTGAACGCAGATCACCAGCCCATGCAGCT...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCATTGTCTCCTTCGCTaGCAATTCCACTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSHCLLR*QFHSHC
Trigger: GCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTGTGACATCTGGCCACTaGAGGACATCTTTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSVTSGH*RTSFGN
Trigger: GTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCAC...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCTACCACTGGTATACTaGTCGCTGTACAGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSLPLVY*SLYSLR
Trigger: CCTCAAGCTGTACAGCGAGCAGTATACCAGTGGTAG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATCGTTGGATTCTTCATaGACACTAATGAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: SKHREEQTAYFLLWWESISLDSS*TLMSLL
Trigger: TAACAAACTCATTAGTGTGCATGAAGAATCCAACGA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCAGCAGCTGCACTGCGTaGATGTCTACGATGACATTG +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPSSCTA*MSTMTL
Trigger: CAATGTCATCGTAGACATCCACGCAGTGCAGCTGCT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCGCGGTTTCTCTTTATaGCAGTCAGTAAGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSRGFSL*QSVSLP
Trigger: GGGAAGGCTTACTGACTGCCATAAAGAGAAACCGCG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGAGTCCAGTTCTCCGTaGTCTCCATGGCTTCGTTTA +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPESSSP*SPWLRL
Trigger: TAAACGAAGCCATGGAGACCACGGAGAACTGGACTC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTAACCGTGTTTGCCACTaGACAGCTTGCATGACGATG +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSNRVCH*TACMTM
Trigger: CATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTT...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCACTTGGTAAATGTGTaGGCTGGAAGGGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSHLVNV*AGRGSD
Trigger: ATCACTGCCCCTTCCAGCCCACACATTTACCAAGTG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTGGATTTGATGTTGTCTaGGCCAAGAGAGGACTCACT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSGFDVV*AKRGLT
Trigger: AGTGAGTCCTCTCTTGGCTCAGACAACATCAAATCC...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGCTTCGTTTAGCCACTaGATGAATTCGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPASFSH*MNSSSL
Trigger: CAAGCTGGACGAATTCATTCAGTGGCTAAACGAAGC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGAGCTCCTGATATTCTaGATCAAAGTCCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPELLIF*IKVQKP
Trigger: GGGCTTCTGGACTTTGATTCAGAATATCAGGAGCTC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTTCTTTTTCAGGTGCCTaGTGGACATTTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSSFSGA*WTFPRC
Trigger: ACAGCGTGGAAATGTCCATCAGGCACCTGAAAAAGA...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTTACACTTTGCTTTCTTaGACTCCCCTCTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSYTLLS*TPLSLG
Trigger: GCCAAGAGAGAGGGGAGTTCAAGAAAGCAAAGTGTA...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCCAGTTCGGTAAGAGATaGCGGCGAGTCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPQFGKR*RRVFID
Trigger: ATCAATGAAGACTCGCCGGCATCTCTTACCGAACTG...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTTCTAGCCACACTTGGTaGATCATTAGACAAAGATTT +
Preference number: 4 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSSSHTW*IIRQRF
Trigger: AAATCTTTGTCTAATGATGCACCAAGTGTGGCTAGA...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCTTCAAGTTTCACTGTTaGGACCATAGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPFKFHC*DHRLQV
Trigger: GACCTGGAGCCTATGGTCCCAACAGTGAAACTTGAA...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCTGCGTCTCCCATTTGTaGGTCCAGATGTTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPCVSHL*VQMLCF
Trigger: GAAACACAACATCTGGACCCACAAATGGGAGACGCA...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCAAAGAAGTGCTTCGCTaGAGGCTGTCACTGCCATTT +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPKEVLR*RLSLPF
Trigger: AAATGGCAGTGACAGCCTCCAGCGAAGCACTTCTTT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTTTAGCAGCTTCATCCTaGACTTCTGATTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSLAASS*TSDSFG
Trigger: TCCAAATGAATCAGAAGTCCAGGATGAAGCTGCTAA...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTGGCTGTCATTTGTTCTaGCTTAGCAGCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSGCHLF*LSSFIL
Trigger: CAGGATGAAGCTGCTAAGCCAGAACAAATGACAGCC...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCTCAATCTCAGGTAAGTaGAGGACAATCTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPSISGK*RTIFQS
Trigger: CGACTGGAAGATTGTCCTGCACTTACCTGAGATTGA...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTGATACAGTGCAGCCTTaGCTTTTGGCTGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSDTVQP*LLAVLH
Trigger: ATGCAAAACAGCCAAAAGGCAAGGCTGCACTGTATC...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTTCTGGGGTAGAAGCTTaGTTAGGTTCTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSSGVEA*LGSPVS
Trigger: TGAAACTGGAGAACCTAACCAAGCTTCTACCCCAGA...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCAGCGACTTAAAGTATTaGAGTTGTTTCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPSDLKY*SCFSAL
Trigger: GAGCGCCGAGAAACAACTCCAATACTTTAAGTCGCT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCTGAAGGACATCTTTTaGGAACTGCTTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSLKDIF*ELLCRV
Trigger: CACTCTGCAAAGCAGTTCCCAAAAGATGTCCTTCAG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTACATCCAGTGACATCTaGCCACTGAAGGACATCTTT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSTSSDI*PLKDIF
Trigger: AAAGATGTCCTTCAGTGGCCAGATGTCACTGGATGT...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp TCTGTTGCCCCAATCTTGGTCTTCTCAGCTTCCAGATaGTCTTGCTACAAATATTCTTGTTTACAAATTTCC +
Preference number: 4 (lower is better)
Translates to: SVAPILVFSASR*SCYKYSCLQIS
Trigger: GGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGACCAAGATTGGGGCAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCCTGATTTCTCATCAGTaGACTTTTTCATGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: SSQLPDCLATNILVYKFPLISHQ*TFSCRR
Trigger: TCTCCGGCATGAAAAAGTTCACTGATGAGAAATCAG...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR TCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTACTTTTGAGGGCTGTTaGTGCCATGTCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSTFEGC*CHVNDF
Trigger: GAAATCATTGACATGGCATCAACAGCCCTCAAAAGT...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR GCA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTACTCTTCTTTCCTCTTaGTACCACTGGTATACTGCT +
Preference number: 4 (lower is better)
Translates to: YYLQGYDQRETSKHICFSTLLSS*YHWYTA
Trigger: AGCAGTATACCAGTGGTAGCAAGAGGAAAGAAGAGT...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
3UTR CAA 72 bp TTTATTCGGAGATTCTTTAAAATAAATGACACGCGTTaGCCAGGAAATACACACGAAAGGAATGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: FIRRFFKINDTR*PGNTHERNDLL
Trigger: AAGCAAATCATTCCTTTCGTGTGTATTTCCTGGCAAACGCGTGTCATTTATTTTAAAGAATCTCCGAATAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp TGTAGGATGCGCTCCCGGAGGACCAGCACGGATACGCGGAGCTGGTaGCAGAGCAGCTGCACTGCGTGGATGTCTACGATGACATTGACC +
Preference number: 5 (lower is better)
Translates to: CRMRSRRTSTDTRSW*QSSCTAWMSTMTLT
Trigger: GGTCAATGTCATCGTAGACATCCACGCAGTGCAGCTGCTCTGGCACCAGCTCCGCGTATCCGTGCTGGTCCTCCGGGAGCGCATCCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp CCTTGTAGGATGCGCTCCCGGAGGACCAGCACGGATACGCGGAGCTaGTGCCAGAGCAGCTGCACTGCGTGGATGTCTACGATGACATTG +
Preference number: 5 (lower is better)
Translates to: PCRMRSRRTSTDTRS*CQSSCTAWMSTMTL
Trigger: CAATGTCATCGTAGACATCCACGCAGTGCAGCTGCTCTGGCACCAGCTCCGCGTATCCGTGCTGGTCCTCCGGGAGCGCATCCTACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp CAGCTGCCTTACCAGGCTTCCGCTTTCAGGAGAGAGCAGGTCACGTaGGCCCGACCCACTGTGGCCTGCCATTGTGTCCTGTATCTTCTC +
Preference number: 5 (lower is better)
Translates to: QLPYQASAFRREQVT*ARPTVACHCVLYLL
Trigger: GAGAAGATACAGGACACAATGGCAGGCCACAGTGGGTCGGGCCCACGTGACCTGCTCTCTCCTGAAAGCGGAAGCCTGGTAAGGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 90 bp ATCTTCCAGTCGGCTGCTGTGTGGAGTGGAGGTGGCTTTCCATACTaGTGCTCAGCACCCACGTCCTTCACGGCCTCTTCTCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: IFQSAAVWSGGGFPY*CSAPTSFTASSPSP
Trigger: AGGAGAGGGAGAAGAGGCCGTGAAGGACGTGGGTGCTGAGCAGCAGTATGGAAAGCCACCTCCACTCCACACAGCAGCCGACTGGAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp CTGTTGCTGGTCTCGCCGTGGCTTTCGGAGCTCCAGGAGACACCATaGTCGGCACGACTGAGCTCCTGGTATTCTCGGATTGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LLLVSPWLSELQETP*SARLSSWYSRIAFL
Trigger: CAGGAAAGCAATCCGAGAATACCAGGAGCTCAGTCGTGCCGACCATGGTGTCTCCTGGAGCTCCGAAAGCCACGGCGAGACCAGCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS-3UTR CAA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCACAAGCCGGCCCTCTGTaGTTTCTTCAGAGAATGCTT +
Preference number: 5 (lower is better)
Translates to: DQPRVGQASPELQPGYLSQAGPL*FLQRML
Trigger: AAGCATTCTCTGAAGAAACAACAGAGGGCCGGCTTG...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCAGAGGATGCCTATCATTaGGGGGACCAAATTCCTTCC +
Preference number: 5 (lower is better)
Translates to: DQPRVGQASPELQPGYLSEDAYH*GDQIPS
Trigger: GGAAGGAATTTGGTCCCCCAAATGATAGGCATCCTC...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp GTCAGTGTGTCCCCTAAGGAAGACGTCTCCAGTGTTGAGCCCAGCTaGTCTCCAGGTTCAAGAGCGCCATCTTCCTCATGTCCACCTCTG +
Preference number: 5 (lower is better)
Translates to: VSVSPKEDVSSVEPS*SPGSRAPSSSCPPL
Trigger: CAGAGGTGGACATGAGGAAGATGGCGCTCTTGAACCTGGAGAGCAGCTGGGCTCAACACTGGAGACGTCTTCCTTAGGGGACACACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 90 bp CCACCTTGTGCAAACACTCATAGGACTGGCTGGCGGCAGAAGGGCTaGTGGGGTAGGAAGACTGCAACACTAGGCAGAGCTTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: PPCANTHRTGWRQKG*WGRKTATLGRASIC
Trigger: ACAGATCGAAGCTCTGCCTAGTGTTGCAGTCTTCCTACCCCAGCAGCCCTTCTGCCGCCAGCCAGTCCTATGAGTGTTTGCACAAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp CAGAGAATGCTTGCAGAATGTCAGTCTGCCTGGTGTAGTTGCCATTaGCGTCCTGCAGACCTTGTAGGATGCGCTCCCGGAGGACCAGCA +
Preference number: 5 (lower is better)
Translates to: QRMLAECQSAWCSCH*RPADLVGCAPGGPA
Trigger: TGCTGGTCCTCCGGGAGCGCATCCTACAAGGTCTGCAGGACGCCAATGGCAACTACACCAGGCAGACTGACATTCTGCAAGCATTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp CCTTGTGCAAACACTCATAGGACTGGCTGGCGGCAGAAGGGCTGCTaGGGTAGGAAGACTGCAACACTAGGCAGAGCTTCGATCTGTCAG +
Preference number: 5 (lower is better)
Translates to: PCANTHRTGWRQKGC*GRKTATLGRASICQ
Trigger: CTGACAGATCGAAGCTCTGCCTAGTGTTGCAGTCTTCCTACCCCAGCAGCCCTTCTGCCGCCAGCCAGTCCTATGAGTGTTTGCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS-3UTR CAA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGGCCAGTATCTCGGCTTaGATGGTGTCCAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGASISA*MVSRAL
Trigger: CAGAGCCCTGGACACCATCAAAGCCGAGATACTGGC...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCAAACTCTTCTTTCCTCTaGCTACCACTGGTATACTGC +
Preference number: 5 (lower is better)
Translates to: DQPRVGQASPELQPGYLSNSSFL*LPLVYC
Trigger: GCAGTATACCAGTGGTAGCAAGAGGAAAGAAGAGTT...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp CCATCTTCCTCATGTCCACCTCTGTGGTCCTCTGAAAGGATCACTTaGGATGAGTCCTCATTGGCTGCTCCACAGCTGGAAGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: PSSSCPPLWSSERIT*DESSLAAPQLEGTG
Trigger: GCCTGTCCCTTCCAGCTGTGGAGCAGCCAATGAGGACTCATCTCAAGTGATCCTTTCAGAGGACCACAGAGGTGGACATGAGGAAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 90 bp GTATCTCTTAGCCACCTTTTCAGCTCTTTGATCCTGACCTCCAGCTaGCTTACCAGGCTTCCGCTTTCAGGAGAGAGCAGGTCACGTGGG +
Preference number: 5 (lower is better)
Translates to: VSLSHLFSSLILTSS*LTRLPLSGESRSRG
Trigger: CCCACGTGACCTGCTCTCTCCTGAAAGCGGAAGCCTGGTAAGGCAGCTGGAGGTCAGGATCAAAGAGCTGAAAAGGTGGCTAAGAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAAGACGTCTCCAGTGTaGAGCCCAGCTGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPKTSPV*SPAALQ
Trigger: CTGGAGAGCAGCTGGGCTCAACACTGGAGACGTCTT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGAGAGGAAGTAGAGTCTaGGTTTGCTGTCTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGRGSRV*VCCLRR
Trigger: CCTCCGGAGACAGCAAACCAAGACTCTACTTCCTCT...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp CTTCTTTCCTCTTGCTACCACTGGTATACTGCTCGCTGTACAGCTTaGGGGACATCTGCTCCACAGCGTCTCTCTGAGCTTCCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: LLSSCYHWYTARCTA*GTSAPQRLSELPGS
Trigger: GCTACCTGGAAGCTCAGAGAGACGCTGTGGAGCAGATGTCCCTCAAGCTGTACAGCGAGCAGTATACCAGTGGTAGCAAGAGGAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 90 bp CATTTCCACGCTGTAGCGCTTGTAAAGATGCTGCTGCTGCTCCTCTaGCATCATCAGGTCGTGGCTGTCCATCACAAGGGACTCCATGTC +
Preference number: 5 (lower is better)
Translates to: HFHAVALVKMLLLLL*HHQVVAVHHKGLHV
Trigger: GACATGGAGTCCCTTGTGATGGACAGCCACGACCTGATGATGTCAGAGGAGCAGCAGCAGCATCTTTACAAGCGCTACAGCGTGGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 90 bp GGAGACACCATGGTCGGCACGACTGAGCTCCTGGTATTCTCGGATTaGTTTCCTGAACCAGTTCCCCGTTTAGGTATTTTGCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: GDTMVGTTELLVFSD*FPEPVPRLGILHRD
Trigger: GTCCCTGTGCAAAATACCTAAACGGGGAACTGGTTCAGGAAAGCAATCCGAGAATACCAGGAGCTCAGTCGTGCCGACCATGGTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp CGGGGACCCATCGACCATACTGAACAAGCTCATGTCGGAGTTGGTTaGCATCTCATTGTCTCCTTCGCTGACAATTCCACTCTCACTGCC +
Preference number: 5 (lower is better)
Translates to: RGPIDHTEQAHVGVG*HLIVSFADNSTLTA
Trigger: GGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAGTATGGTCGATGGGTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GACCAGCCCAGGGTGGGTCAGGCCAGCCCCGAGCTTCAGCCAGGCTATCTTTCATGCACACTAATGAGTTaGTTACTTATGTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: DQPRVGQASPELQPGYLSCTLMS*LLMSVS
Trigger: TGAGACAGACATAAGTAACAAACTCATTAGTGTGCA...TGAAAGATAGCCTGGCTGAAGCTCGGGGCTGGCCTGACCCACCCTGGGCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAGGCTGCGTCTCCCATTaGTGGGTCCAGATGTTGTGT +
Preference number: 5 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPGCVSH*WVQMLC
Trigger: ACACAACATCTGGACCCACAAATGGGAGACGCAGCC...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp GTTAGGTTCTCCAGTTTCAGAGCTAACACCTCCGTTTGTTTGAGGTaGGATGGCAGCGCTAGGTATTCATCAGAGCCGTACCAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VRFSSFRANTSVCLR*DGSARYSSEPYQAS
Trigger: GGAGGCCTGGTACGGCTCTGATGAATACCTAGCGCTGCCATCTCACCTCAAACAAACGGAGGTGTTAGCTCTGAAACTGGAGAACCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 90 bp GTGGGCTGCACTGTGCCTGTGAACTTGGGGCTGCTTTTTAGAAACTaGGTGTGGCTGTCCTCGTGGAACTCAACATTGTGGAGACTGTAC +
Preference number: 5 (lower is better)
Translates to: VGCTVPVNLGLLFRN*VWLSSWNSTLWRLY
Trigger: GTACAGTCTCCACAATGTTGAGTTCCACGAGGACAGCCACACTCAGTTTCTAAAAAGCAGCCCCAAGTTCACAGGCACAGTGCAGCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp CCTCGCAAATATCCTTTAGCTGAACTAGATGCACATCCACATGCTTaGTGTCTGCATCCTGCTGGACCGAGTAGGTTAGGTCACGGACCC +
Preference number: 5 (lower is better)
Translates to: PRKYPLAELDAHPHA*CLHPAGPSRLGHGP
Trigger: GGGTCCGTGACCTAACCTACTCGGTCCAGCAGGATGCAGACAGCAAGCATGTGGATGTGCATCTAGTTCAGCTAAAGGATATTTGCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 90 bp ATAAGTCCTCATCAGAAAGAATGTCACTCAGGGGCCCAGATTCAATaGTCTCCCCGAGAGATGAGGCTATGTCGCTGGATGAGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: ISPHQKECHSGAQIQ*SPREMRLCRWMSSE
Trigger: CTCCGAGCTCATCCAGCGACATAGCCTCATCTCTCGGGGAGAGCATTGAATCTGGGCCCCTGAGTGACATTCTTTCTGATGAGGACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 90 bp GACATGTCGGCAAACTCTTCTTTCCTCTTGCTACCACTGGTATACTaGTCGCTGTACAGCTTGAGGGACATCTGCTCCACAGCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: DMSANSSFLLLPLVY*SLYSLRDICSTASL
Trigger: GAGAGACGCTGTGGAGCAGATGTCCCTCAAGCTGTACAGCGAGCAGTATACCAGTGGTAGCAAGAGGAAAGAAGAGTTTGCCGACATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS-3UTR CAA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGGAGCGACTTAAAGTATaGGAGTTGTTTCTCGGCGCT +
Preference number: 5 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGERLKV*ELFLGA
Trigger: AGCGCCGAGAAACAACTCCAATACTTTAAGTCGCTC...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp GCTTGGTTAGGTTCTCCAGTTTCAGAGCTAACACCTCCGTTTGTTTaGGGTGAGATGGCAGCGCTAGGTATTCATCAGAGCCGTACCAGG +
Preference number: 5 (lower is better)
Translates to: AWLGSPVSELTPPFV*GEMAALGIHQSRTR
Trigger: CCTGGTACGGCTCTGATGAATACCTAGCGCTGCCATCTCACCTCAAACAAACGGAGGTGTTAGCTCTGAAACTGGAGAACCTAACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 90 bp AACCTCAGAATGGAGGCCACTCCTCTACGCCGCTGCTTGATCTCATaGCAGAGCGACTTAAAGTATTGGAGTTGTTTCTCGGCGCTCGTT +
Preference number: 5 (lower is better)
Translates to: NLRMEATPLRRCLIS*QSDLKYWSCFSALV
Trigger: AACGAGCGCCGAGAAACAACTCCAATACTTTAAGTCGCTCTGTCATGAGATCAAGCAGCGGCGTAGAGGAGTGGCCTCCATTCTGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 90 bp TGGCATCTCATTGTCTCCTTCGCTGACAATTCCACTCTCACTGCCTaGATTCTGGCTCAAGTCTCCACTCTGACACGAGTAAGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: WHLIVSFADNSTLTA*ILAQVSTLTRVRPH
Trigger: GTGAGGCCTTACTCGTGTCAGAGTGGAGACTTGAGCCAGAATTCAGGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp AGCTACGAGATAAAAGGGAGAGCTGTCGGGCATTCTGGATGCCCGTaGGTGCCTTCTCTATGTCGCTACTTTTGTATGAGCTTCGACCCA +
Preference number: 5 (lower is better)
Translates to: SYEIKGRAVGHSGCP*VPSLCRYFCMSFDP
Trigger: TGGGTCGAAGCTCATACAAAAGTAGCGACATAGAGAAGGCACTCACGGGCATCCAGAATGCCCGACAGCTCTCCCTTTTATCTCGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp ATCTCCTTCCTTTGCATCATCAGCTCCCTTCTGAGGGGAAAGTCCTaGAAGAGGCACCGTGTCTGTCTCATCACGGAACACAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: ISFLCIISSLLRGKS*KRHRVCLITEHRRA
Trigger: AGCTCTTCTGTGTTCCGTGATGAGACAGACACGGTGCCTCTTTCAGGACTTTCCCCTCAGAAGGGAGCTGATGATGCAAAGGAAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 90 bp CTGGCTAGTGGTCATGTCGCCCAGGCCACCAAGCAGATCCTCACTTaGACTGTAGTCAGAAAGTTCAAAGGCAGTAATACCACAATCCAG +
Preference number: 5 (lower is better)
Translates to: LASGHVAQATKQILT*TVVRKFKGSNTTIQ
Trigger: CTGGATTGTGGTATTACTGCCTTTGAACTTTCTGACTACAGTCCAAGTGAGGATCTGCTTGGTGGCCTGGGCGACATGACCACTAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp ACAGAAGAGCTGGCTGTCATTTGTTCTGGCTTAGCAGCTTCATCCTaGACTTCTGATTCATTTGGAAGGGCACTGGAGAGACGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TEELAVICSGLAASS*TSDSFGRALERRAS
Trigger: GGAAGCCCGTCTCTCCAGTGCCCTTCCAAATGAATCAGAAGTCCAGGATGAAGCTGCTAAGCCAGAACAAATGACAGCCAGCTCTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGGCTCCTTCCATTGACTaGCAATCATCTTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGAPSID*QSSSAC
Trigger: ACATGCTGAAGATGATTGCAAGTCAATGGAAGGAGC...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAGTGGAGACTGTACACTaGGTAAATGTGTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPVETVH*VNVWAG
Trigger: TCCAGCCCACACATTTACCAAGTGTACAGTCTCCAC...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAGAGCTGGCTGTCATTaGTTCTGGCTTAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPRAGCH*FWLSSF
Trigger: GAAGCTGCTAAGCCAGAACAAATGACAGCCAGCTCT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACACCATCTCCTTCCTTaGCATCATCAGCTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPHHLLP*HHQLPS
Trigger: AGAAGGGAGCTGATGATGCAAAGGAAGGAGATGGTG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp AGAAGTTGGTGTCCTTCTTCCTCCACGGCTTCCTTGAGGGCACAGTaGCTGTCTACGTTCAACTTAAAGCTCAAGTGTGTCTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RSWCPSSSTASLRAQ*LSTFNLKLKCVSRY
Trigger: GTACCTGGAGACACACTTGAGCTTTAAGTTGAACGTAGACAGTCACTGTGCCCTCAAGGAAGCCGTGGAGGAAGAAGGACACCAACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 90 bp ACAAGCTCATGTCGGAGTTGGTTGGCATCTCATTGTCTCCTTCGCTaGCAATTCCACTCTCACTGCCTGAATTCTGGCTCAAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: TSSCRSWLASHCLLR*QFHSHCLNSGSSLH
Trigger: GTGGAGACTTGAGCCAGAATTCAGGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp CCAGATGTTGTGTTTCAGGGTTACTCGGGGACCCATCGACCATACTaGACAAGCTCATGTCGGAGTTGGTTGGCATCTCATTGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: PDVVFQGYSGTHRPY*TSSCRSWLASHCLL
Trigger: AAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAGTATGGTCGATGGGTCCCCGAGTAACCCTGAAACACAACATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp AAGAGATGCCGGCGAGTCTTCATTGATAGAGGATGCGACATCCAGTaGCATCTGGCCACTGAAGGACATCTTTTGGGAACTGCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: KRCRRVFIDRGCDIQ*HLATEGHLLGTALQ
Trigger: CTGCAAAGCAGTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCACTGGATGTCGCATCCTCTATCAATGAAGACTCGCCGGCATCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp GGCTCTGTATGTTCTCCAGACGATTCAAAAGATCTAATGTCCTCTTaGTCAGCTCACCAACCGAGCCACTGCTCACACTTATGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSVCSPDDSKDLMSS*SAHQPSHCSHLCPQ
Trigger: CTGGGGACATAAGTGTGAGCAGTGGCTCGGTTGGTGAGCTGAGCAAGAGGACATTAGATCTTTTGAATCGTCTGGAGAACATACAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 90 bp GCCGGCGAGTCTTCATTGATAGAGGATGCGACATCCAGTGACATCTaGCCACTGAAGGACATCTTTTGGGAACTGCTTTGCAGAGTGATA +
Preference number: 5 (lower is better)
Translates to: AGESSLIEDATSSDI*PLKDIFWELLCRVI
Trigger: TATCACTCTGCAAAGCAGTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCACTGGATGTCGCATCCTCTATCAATGAAGACTCGCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAGCCTTTTTGGCTTTTaGAAAGGAGAGGAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPSLFGF*KGEEVG
Trigger: CCCCACTTCCTCTCCTTTCAAAAAGCCAAAAAGGCT...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp GAGTCCAGTTCTCCGTGGTCTCCATGGCTTCGTTTAGCCACTGAATaGATTCGTCCAGCTTGTTCACAAACCCCTCAATTCTTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: ESSSPWSPWLRLATE*IRPACSQTPQFFPR
Trigger: TCTGGGAAAGAATTGAGGGGTTTGTGAACAAGCTGGACGAATTCATTCAGTGGCTAAACGAAGCCATGGAGACCACGGAGAACTGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp ATCTTTAAATTTTTGCTCCAGCACATTGGCTGCGTCTCCCATTTGTaGGTCCAGATGTTGTGTTTCAGGGTTACTCGGGGACCCATCGAC +
Preference number: 5 (lower is better)
Translates to: IFKFLLQHIGCVSHL*VQMLCFRVTRGPID
Trigger: GTCGATGGGTCCCCGAGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAATTTAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 90 bp TCTACAGATGAGCTACGAGATAAAAGGGAGAGCTGTCGGGCATTCTaGATGCCCGTGAGTGCCTTCTCTATGTCGCTACTTTTGTATGAG +
Preference number: 5 (lower is better)
Translates to: STDELRDKRESCRAF*MPVSAFSMSLLLYE
Trigger: CTCATACAAAAGTAGCGACATAGAGAAGGCACTCACGGGCATCCAGAATGCCCGACAGCTCTCCCTTTTATCTCGTAGCTCATCTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 90 bp GAGGATGCGACATCCAGTGACATCTGGCCACTGAAGGACATCTTTTaGGAACTGCTTTGCAGAGTGATATCTGAAACACTCCGCTTGATC +
Preference number: 5 (lower is better)
Translates to: EDATSSDIWPLKDIF*ELLCRVISETLRLI
Trigger: GATCAAGCGGAGTGTTTCAGATATCACTCTGCAAAGCAGTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCACTGGATGTCGCATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 90 bp TGGGTGGGTTCTTGCCATTCCCATTGTTTTCAGAGAGACGTTTTATaGAGCAATTTAGAAGGGCCTCAATGTCCAGGGTGTCCGAGGGAT +
Preference number: 5 (lower is better)
Translates to: WVGSCHSHCFQRDVL*SNLEGPQCPGCPRD
Trigger: ATCCCTCGGACACCCTGGACATTGAGGCCCTTCTAAATTGCTCCATAAAACGTCTCTCTGAAAACAATGGGAATGGCAAGAACCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGTGTTGCCGTTTGATTaGCCTCTGCAGCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVVLPFD*PLQLLP
Trigger: TGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACAC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCTGCTCGCTGTACAGCTaGAGGGACATCTGCTCCACA +
Preference number: 5 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSCSLYS*RDICST
Trigger: TGTGGAGCAGATGTCCCTCAAGCTGTACAGCGAGCA...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp ACCAGGAATCTTCTAAGGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCACGTTCCTTCCTTCTCTaGTCTCAGACAGGAATTGAA +
Preference number: 5 (lower is better)
Translates to: TRNLLRASLQHRHRTNTPRSFLL*SQTGIE
Trigger: TTCAATTCCTGTCTGAGACAAGAGAAGGAAGGAACG...TGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCCTTAGAAGATTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GGGCCTCTCTGCAGCACAGGCATAGGACCAATACACCAAACTAAAAGGGGAGGGATTATCATTGGGAATTaGAGTTTTGAGCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: GPLCSTGIGPIHQTKRGGIIIGN*SFEPWR
Trigger: CCTCCAAGGCTCAAAACTCAAATTCCCAATGATAAT...CCCTCCCCTTTTAGTTTGGTGTATTGGTCCTATGCCTGTGCTGCAGAGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCAGTCCACGTCTTCCTaGTCATCTAAGCCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVQSTSS*SSKPES
Trigger: GGACTCTGGCTTAGATGACAAGGAAGACGTGGACTG...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCAGCTGTGTTGCCGTTaGATTTGCCTCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSQLCCR*ICLCSS
Trigger: GGAGCTGCAGAGGCAAATCAAACGGCAACACAGCTG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATATCTGAAACACTCCGCTaGATCTTTTGCTCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SKHREEQTAYFLLWWESISETLR*IFCSEG
Trigger: CCCCTCAGAGCAAAAGATCAAGCGGAGTGTTTCAGA...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAACAATCATGCTGACATaGACGTCGCTCTCATCAGCC +
Preference number: 5 (lower is better)
Translates to: SKHREEQTAYFLLWWESITIMLT*TSLSSA
Trigger: GGCTGATGAGAGCGACGTCAATGTCAGCATGATTGT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp TCCCCAGCTTTCCCATTTACACAACCCACTGGTGAGACAGATGCCTaGGAGACACTTGAAAGCTTAATGCACTCCCCCTCATCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: SPAFPFTQPTGETDA*ETLESLMHSPSSLN
Trigger: ATTTAAAGATGAGGGGGAGTGCATTAAGCTTTCAAGTGTCTCTCAGGCATCTGTCTCACCAGTGGGTTGTGTAAATGGGAAAGCTGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp AATGCACTCCCCCTCATCTTTAAATTTTTGCTCCAGCACATTGGCTaGGTCTCCCATTTGTGGGTCCAGATGTTGTGTTTCAGGGTTACT +
Preference number: 5 (lower is better)
Translates to: NALPLIFKFLLQHIG*VSHLWVQMLCFRVT
Trigger: AGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAATTTAAAGATGAGGGGGAGTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp GAGACACTTGAAAGCTTAATGCACTCCCCCTCATCTTTAAATTTTTaGTCCAGCACATTGGCTGCGTCTCCCATTTGTGGGTCCAGATGT +
Preference number: 5 (lower is better)
Translates to: ETLESLMHSPSSLNF*SSTLAASPICGSRC
Trigger: ACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAATTTAAAGATGAGGGGGAGTGCATTAAGCTTTCAAGTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp TCCAGTGACATCTGGCCACTGAAGGACATCTTTTGGGAACTGCTTTaGAGAGTGATATCTGAAACACTCCGCTTGATCTTTTGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SSDIWPLKDIFWELL*RVISETLRLIFCSE
Trigger: CTCAGAGCAAAAGATCAAGCGGAGTGTTTCAGATATCACTCTGCAAAGCAGTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp GCATGTTACTATGTCGATCTTCATGAAAGCTTACGAGCTTCTCTTTaGAGGTTAAAGTTTGGGGGCTGGGATACAGTGCAGCCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: ACYYVDLHESLRASL*RLKFGGWDTVQPCL
Trigger: AAGGCAAGGCTGCACTGTATCCCAGCCCCCAAACTTTAACCTGCAAAGAGAAGCTCGTAAGCTTTCATGAAGATCGACATAGTAACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 90 bp GTCTCAGATTCTTTTCCCATCTTCTTTCGTAACCGTGTTTGCCACTaGACAGCTTGCATGACGATGGCTTCCCACCTTCTTTCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: VSDSFPIFFRNRVCH*TACMTMASHLLSRF
Trigger: AAACCTTGAAAGAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGATGGGAAAAGAATCTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTCGCGGATGGATCTCTaGGGAGTCATCATTTCACAA +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVSRMDL*GVIISQ
Trigger: TTGTGAAATGATGACTCCCAAGAGATCCATCCGCGA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATACTGCAGCTCCTTCCATaGACTTGCAATCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: SKHREEQTAYFLLWWESILQLLP*TCNHLQ
Trigger: CTGAAGATGATTGCAAGTCAATGGAAGGAGCTGCAG...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTGGAAAACATCTGGCTaGCAGTTGCAACAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVWKTSG*QLQQEV
Trigger: CACTTCCTGTTGCAACTGCAAGCCAGATGTTTTCCA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp TCTTTTCCCATCTTCTTTCGTAACCGTGTTTGCCACTGGACAGCTTaGATGACGATGGCTTCCCACCTTCTTTCAAGGTTTACAATGATC +
Preference number: 5 (lower is better)
Translates to: SFPIFFRNRVCHWTA*MTMASHLLSRFTMI
Trigger: GATCATTGTAAACCTTGAAAGAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGATGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 90 bp GCTATAGATTCTTTTCCCATCTTCTTTCGTAACCGTGTTTGCCACTaGACAGCTTGCATGACGATGGCTTCCCACCTTCTTTCAAGGTTT +
Preference number: 5 (lower is better)
Translates to: AIDSFPIFFRNRVCH*TACMTMASHLLSRF
Trigger: AAACCTTGAAAGAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGATGGGAAAAGAATCTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219786.2
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCAAGCAGATCCTCACTaGGACTGTAGTCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVQADPH*DCSQKV
Trigger: AACTTTCTGACTACAGTCCAAGTGAGGATCTGCTTG...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTAGTGGGGATTTGATGTaGTCTGAGCCAAGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSSGDLM*SEPRED
Trigger: GTCCTCTCTTGGCTCAGACAACATCAAATCCCCACT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTAGATCTAATGTCCTCTaGCTCAGCTCACCAACCGAG +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSRSNVL*LSSPTE
Trigger: CTCGGTTGGTGAGCTGAGCAAGAGGACATTAGATCT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTCTGGGACCTTGTTTTaGTGTAACACAATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVSGTLF*CNTMSS
Trigger: GGAGGACATTGTGTTACACAAAAACAAGGTCCCAGA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CCTCACTGTTTGACATTTGCACCCACTCTCTTCTCAGCTATTATGGTGAAAAGCGGAGTACTTTCAACATaGCCATTTTCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: PHCLTFAPTLFSAIMVKSGVLST*PFSMSA
Trigger: GGCCGACATGGAAAATGGCAATGTTGAAAGTACTCC...GCTTTTCACCATAATAGCTGAGAAGAGAGTGGGTGCAAATGTCAAACAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCACGGTAGGTGTCATGTaGATGGCCATGGGCGAGGCA +
Preference number: 5 (lower is better)
Translates to: SSQLPDCLATNILVYKFPTVGVM*MAMGEA
Trigger: TGCCTCGCCCATGGCCATCAACATGACACCTACCGT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTAGAGGAAGTGGGGATTaGATGTTGTCTGAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSRGSGD*MLSEPR
Trigger: TCTTGGCTCAGACAACATCAAATCCCCACTTCCTCT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTTCATGTCGGAGTTGGTaGGCATCTCATTGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSSCRSW*ASHCLL
Trigger: AAGGAGACAATGAGATGCCAACCAACTCCGACATGA...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCCATAAAATTTCATCATCCGTaGCGATACTGGAGTCGTCAT +
Preference number: 5 (lower is better)
Translates to: SKHREEQTAYFLLWWESIKFHHP*RYWSRH
Trigger: ATGACGACTCCAGTATCGCAACGGATGATGAAATTT...TATGGACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTGTTCTGGGTGGGTTCTaGCCATTCCCATTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSVLGGF*PFPLFS
Trigger: TGAAAACAATGGGAATGGCAAGAACCCACCCAGAAC...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp TGTGTCTCTTCAAGTTTCACTGTTGGGACCATAGGCTCCAGGTCTTaGTCAAGGTCGTTGGATTCTTCATGCACACTAATGAGTTTGTTA +
Preference number: 5 (lower is better)
Translates to: CVSSSFTVGTIGSRS*SRSLDSSCTLMSLL
Trigger: TAACAAACTCATTAGTGTGCATGAAGAATCCAACGACCTTGATCAAGACCTGGAGCCTATGGTCCCAACAGTGAAACTTGAAGAGACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTAATGAGCTCAAGAAGTaGGTGTCCTTCTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSNELKK*VSFFLH
Trigger: GTGGAGGAAGAAGGACACCAACTTCTTGAGCTCATT...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCTGTCTCAGACAGGAATaGAAGATGAAAAGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVCLRQE*KMKSSV
Trigger: TACAGAGCTTTTCATCTTCAATTCCTGTCTGAGACA...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTCTTAAAGTATTGGAGTaGTTTCTCGGCGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSLKVLE*FLGARS
Trigger: GGAACGAGCGCCGAGAAACAACTCCAATACTTTAAG...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTTTGCCACTGGACAGCTaGCATGACGATGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: YYLQGYDQRETSKHICFSLPLDS*HDDGFP
Trigger: TGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAA...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTACTGTGCCTGTGAACTaGGGGCTGCTTTTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSTVPVN*GLLFRN
Trigger: GTTTCTAAAAAGCAGCCCCAAGTTCACAGGCACAGT...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTATACACTTTGCTTTCTaGAACTCCCCTCTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSIHFAF*NSPLSW
Trigger: CCAAGAGAGAGGGGAGTTCAAGAAAGCAAAGTGTAT...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGCTTCATAGTTATCTaGGTGCTGAATATCTTTCAT +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGFIVI*VLNIFH
Trigger: ATGAAAGATATTCAGCACCAAGATAACTATGAAGCC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTCACTGTGGCCTGCCATaGTGTCCTGTATCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: YYLQGYDQRETSKHICFSHCGLP*CPVSSL
Trigger: GAGAGAAGATACAGGACACAATGGCAGGCCACAGTG...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp AACTTCAAAGCACAGGGAGGAACAAACTGCATACTTTCTGCTTTGGTGGGAGTCGGTCTGGTAACGATTTaGTGGATGAAAATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: NFKAQGGTNCILSALVGVGLVTI*WMKMKN
Trigger: ATTCTTCATTTTCATCCACAAAATCGTTACCAGACC...GACTCCCACCAAAGCAGAAAGTATGCAGTTTGTTCCTCCCTGTGCTTTGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTCTCATCTTTAAATTTTaGCTCCAGCACATTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSLIFKF*LQHIGC
Trigger: GCAGCCAATGTGCTGGAGCAAAAATTTAAAGATGAG...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 90 bp ATTTCCTTAACAAAGTCATGTACCGAACAATCTTCATCATCTTTCTaGTGGAAAACATCTGGCTTGCAGTTGCAACAGGAAGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ISLTKSCTEQSSSSF*WKTSGLQLQQEVLL
Trigger: CAGCAGCACTTCCTGTTGCAACTGCAAGCCAGATGTTTTCCATCAGAAAGATGATGAAGATTGTTCGGTACATGACTTTGTTAAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCGAGAATCCAGCTGTGTaGCCGTTTGATTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SSQLPDCLATNILVYKFPENPAV*PFDLPL
Trigger: CAGAGGCAAATCAAACGGCAACACAGCTGGATTCTC...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp CGTAACAGTCATACCGAACTAAAACAATCTCACATGTGTGGACACCATCCAAGTTTCAAAGCTTCAACCTaGCTAAGTAGCTCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RNSHTELKQSHMCGHHPSFKAST*LSSSVF
Trigger: AAAGACAGAGCTACTTAGCAAGGTTGAAGCTTTGAA...ACTTGGATGGTGTCCACACATGTGAGATTGTTTTAGTTCGGTATGACTGTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTTTGTGGGTCCAGATGTaGTGTTTCAGGGTTACTCGG +
Preference number: 5 (lower is better)
Translates to: YYLQGYDQRETSKHICFSLWVQM*CFRVTR
Trigger: CCGAGTAACCCTGAAACACAACATCTGGACCCACAA...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp GCTGGAAAAGGCATCAATAAACTCAAGAGTCAACCTGATCAACTTGGTGTTAGTTTGGACTCTGGGACCTaGTTTTTGTGTAACACAATG +
Preference number: 5 (lower is better)
Translates to: AGKGINKLKSQPDQLGVSLDSGT*FLCNTM
Trigger: CATTGTGTTACACAAAAACAAGGTCCCAGAGTCCAA...ACTAACACCAAGTTGATCAGGTTGACTCTTGAGTTTATTGATGCCTTTTCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTGAGGTGCAGGAGACGTaGACAATCATGCTGACATTG +
Preference number: 5 (lower is better)
Translates to: YYLQGYDQRETSKHICFSEVQET*TIMLTL
Trigger: CAATGTCAGCATGATTGTCAACGTCTCCTGCACCTC...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTGGACTTCTGATTCATTaGGAAGGGCACTGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: YYLQGYDQRETSKHICFSGLLIH*EGHWRD
Trigger: GTCTCTCCAGTGCCCTTCCAAATGAATCAGAAGTCC...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TCTTCTCAGCTTCCAGATTGTCTTGCTACAAATATTCTTGTTTACAAATTTCCCACTATGTTTTCAAGATaGCCGATCCCCACCTTGTGC +
Preference number: 5 (lower is better)
Translates to: SSQLPDCLATNILVYKFPTMFSR*PIPTLC
Trigger: GCACAAGGTGGGGATCGGCAATCTTGAAAACATAGT...GGGAAATTTGTAAACAAGAATATTTGTAGCAAGACAATCTGGAAGCTGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 90 bp ACACTTGAATCATCAGAACCATCCATTAATGCTTCATACTCGTCGTaGTTGGATTCAGAAATCTTTTTCACATTTGAAGCAAGGTTCGCT +
Preference number: 5 (lower is better)
Translates to: TLESSEPSINASYSS*LDSEIFFTFEARFA
Trigger: AGCGAACCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCATTAATGGATGGTTCTGATGATTCAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 90 bp TTGAATCATCAGAACCATCCATTAATGCTTCATACTCGTCGTGCTTaGATTCAGAAATCTTTTTCACATTTGAAGCAAGGTTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: LNHQNHPLMLHTRRA*IQKSFSHLKQGSLM
Trigger: CATCAGCGAACCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCATTAATGGATGGTTCTGATGATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS-3UTR CAA 90 bp TATTATCTTCAAGGGTATGATCAGAGAGAAACTTCTAAGCACATATGCTTCAGTTGCCTTTTGGCTGTTTaGCATTCAAAGAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: YYLQGYDQRETSKHICFSCLLAV*HSKRKL
Trigger: AAGCTTTCTCTTTGAATGCAAAACAGCCAAAAGGCA...ACTGAAGCATATGTGCTTAGAAGTTTCTCTCTGATCATACCCTTGAAGATAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp CGCTCCCGGAGGACCAGCACGGATACGCGGAGCTGGTaGCAGAGCAGCTGCACTGCGTGGATGTCTACGATG +
Preference number: 6 (lower is better)
Translates to: RSRRTSTDTRSW*QSSCTAWMSTM
Trigger: CATCGTAGACATCCACGCAGTGCAGCTGCTCTGGCACCAGCTCCGCGTATCCGTGCTGGTCCTCCGGGAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp GATGGCCATGGGCGAGGCATCAGTCGCCATGGGGTCTaGGTCCTGGGACCGCAGTGGGGAAAGGGTCACACT +
Preference number: 6 (lower is better)
Translates to: DGHGRGISRHGV*VLGPQWGKGHT
Trigger: AGTGTGACCCTTTCCCCACTGCGGTCCCAGGACCCAGACCCCATGGCGACTGATGCCTCGCCCATGGCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp ATGCGCTCCCGGAGGACCAGCACGGATACGCGGAGCTaGTGCCAGAGCAGCTGCACTGCGTGGATGTCTACG +
Preference number: 6 (lower is better)
Translates to: MRSRRTSTDTRS*CQSSCTAWMST
Trigger: CGTAGACATCCACGCAGTGCAGCTGCTCTGGCACCAGCTCCGCGTATCCGTGCTGGTCCTCCGGGAGCGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp TACCAGGCTTCCGCTTTCAGGAGAGAGCAGGTCACGTaGGCCCGACCCACTGTGGCCTGCCATTGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: YQASAFRREQVT*ARPTVACHCVL
Trigger: CAGGACACAATGGCAGGCCACAGTGGGTCGGGCCCACGTGACCTGCTCTCTCCTGAAAGCGGAAGCCTGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp CCCTCTCCTTCCTCCTGCTCCACGGTAGGTGTCATGTaGATGGCCATGGGCGAGGCATCAGTCGCCATGGGG +
Preference number: 6 (lower is better)
Translates to: PSPSSCSTVGVM*MAMGEASVAMG
Trigger: CCCCATGGCGACTGATGCCTCGCCCATGGCCATCAACATGACACCTACCGTGGAGCAGGAGGAAGGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp GCTGCTGTGTGGAGTGGAGGTGGCTTTCCATACTGCTaGTCAGCACCCACGTCCTTCACGGCCTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: AAVWSGGGFPYC*SAPTSFTASSP
Trigger: GGGAGAAGAGGCCGTGAAGGACGTGGGTGCTGAGCAGCAGTATGGAAAGCCACCTCCACTCCACACAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp TCGGCTGCTGTGTGGAGTGGAGGTGGCTTTCCATACTaGTGCTCAGCACCCACGTCCTTCACGGCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SAAVWSGGGFPY*CSAPTSFTASS
Trigger: AGAAGAGGCCGTGAAGGACGTGGGTGCTGAGCAGCAGTATGGAAAGCCACCTCCACTCCACACAGCAGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp GTCTCGCCGTGGCTTTCGGAGCTCCAGGAGACACCATaGTCGGCACGACTGAGCTCCTGGTATTCTCGGATT +
Preference number: 6 (lower is better)
Translates to: VSPWLSELQETP*SARLSSWYSRI
Trigger: AATCCGAGAATACCAGGAGCTCAGTCGTGCCGACCATGGTGTCTCCTGGAGCTCCGAAAGCCACGGCGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp CAGGAGAGAGCAGGTCACGTGGGCCCGACCCACTGTGGCCTGCCATaGTGTCCTGTATCTTCTCTCTTAGGGTTTTCCCAAGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: QERAGHVGPTHCGLP*CPVSSLLGFSQAAP
Trigger: GGGAGCTGCTTGGGAAAACCCTAAGAGAGAAGATACAGGACACAATGGCAGGCCACAGTGGGTCGGGCCCACGTGACCTGCTCTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp CACGGATACGCGGAGCTGGTGCCAGAGCAGCTGCACTaGGTGGATGTCTACGATGACATTGACCGAGTAGGA +
Preference number: 6 (lower is better)
Translates to: HGYAELVPEQLH*VDVYDDIDRVG
Trigger: TCCTACTCGGTCAATGTCATCGTAGACATCCACGCAGTGCAGCTGCTCTGGCACCAGCTCCGCGTATCCGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp GCAAACACTCATAGGACTGGCTGGCGGCAGAAGGGCTaGTGGGGTAGGAAGACTGCAACACTAGGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: ANTHRTGWRQKG*WGRKTATLGRA
Trigger: AGCTCTGCCTAGTGTTGCAGTCTTCCTACCCCAGCAGCCCTTCTGCCGCCAGCCAGTCCTATGAGTGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp TCAGGAGAGAGCAGGTCACGTGGGCCCGACCCACTGTaGCCTGCCATTGTGTCCTGTATCTTCTCTCTTAGG +
Preference number: 6 (lower is better)
Translates to: SGESRSRGPDPL*PAIVSCIFSLR
Trigger: CCTAAGAGAGAAGATACAGGACACAATGGCAGGCCACAGTGGGTCGGGCCCACGTGACCTGCTCTCTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp CTTGCAGAATGTCAGTCTGCCTGGTGTAGTTGCCATTaGCGTCCTGCAGACCTTGTAGGATGCGCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: LAECQSAWCSCH*RPADLVGCAPG
Trigger: TCCGGGAGCGCATCCTACAAGGTCTGCAGGACGCCAATGGCAACTACACCAGGCAGACTGACATTCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp CTCCAGGAGACACCATGGTCGGCACGACTGAGCTCCTaGTATTCTCGGATTGCTTTCCTGAACCAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: LQETPWSARLSS*YSRIAFLNQFP
Trigger: GGGGAACTGGTTCAGGAAAGCAATCCGAGAATACCAGGAGCTCAGTCGTGCCGACCATGGTGTCTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp AGCCCTGGGAAGTGTGGGACGCACCATCTCCTTCCTTaGCATCATCAGCTCCCTTCTGAGGGGAAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: SPGKCGTHHLLP*HHQLPSEGKVL
Trigger: CAGGACTTTCCCCTCAGAAGGGAGCTGATGATGCAAAGGAAGGAGATGGTGCGTCCCACACTTCCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp CCCTCCTCGTCCTCCACAGACACATCAGTAGCCAGTATCTCGGCTTaGATGGTGTCCAGGGCTCTGAGAATCCAGCTGTGTTGCCGTTTG +
Preference number: 6 (lower is better)
Translates to: PSSSSTDTSVASISA*MVSRALRIQLCCRL
Trigger: CAAACGGCAACACAGCTGGATTCTCAGAGCCCTGGACACCATCAAAGCCGAGATACTGGCTACTGATGTGTCTGTGGAGGACGAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp TCAGTGCAAGCAGAGGTGCAGGAGACGTTGACAATCATGCTGACATaGACGTCGCTCTCATCAGCCACCGAGCGATTCAGGCGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SVQAEVQETLTIMLT*TSLSSATERFRRFL
Trigger: CAGGAAGCGCCTGAATCGCTCGGTGGCTGATGAGAGCGACGTCAATGTCAGCATGATTGTCAACGTCTCCTGCACCTCTGCTTGCACTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp TCTCCACACAGCCCTGGGAAGTGTGGGACGCACCATCTCCTTCCTTaGCATCATCAGCTCCCTTCTGAGGGGAAAGTCCTGAAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: SPHSPGKCGTHHLLP*HHQLPSEGKVLKEA
Trigger: TGCCTCTTTCAGGACTTTCCCCTCAGAAGGGAGCTGATGATGCAAAGGAAGGAGATGGTGCGTCCCACACTTCCCAGGGCTGTGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp TCCCCTAAGGAAGACGTCTCCAGTGTTGAGCCCAGCTaGTCTCCAGGTTCAAGAGCGCCATCTTCCTCATGT +
Preference number: 6 (lower is better)
Translates to: SPKEDVSSVEPS*SPGSRAPSSSC
Trigger: ACATGAGGAAGATGGCGCTCTTGAACCTGGAGAGCAGCTGGGCTCAACACTGGAGACGTCTTCCTTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp AGCCACCTTTTCAGCTCTTTGATCCTGACCTCCAGCTaGCTTACCAGGCTTCCGCTTTCAGGAGAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SHLFSSLILTSS*LTRLPLSGESR
Trigger: CCTGCTCTCTCCTGAAAGCGGAAGCCTGGTAAGGCAGCTGGAGGTCAGGATCAAAGAGCTGAAAAGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp AGCAGCTTCAGGGAGAACTCCGTCTCAAGGAGGGCATaGATCTGCTCCACGTGGTCGGAAATATCCTCGCAA +
Preference number: 6 (lower is better)
Translates to: SSFRENSVSRRA*ICSTWSEISSQ
Trigger: TTGCGAGGATATTTCCGACCACGTGGAGCAGATCCATGCCCTCCTTGAGACGGAGTTCTCCCTGAAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp ATTCAATGCTCTCCCCGAGAGATGAGGCTATGTCGCTaGATGAGCTCGGAGAGACGGTGCCTAGCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: IQCSPREMRLCR*MSSERRCLALC
Trigger: ACACAAGGCTAGGCACCGTCTCTCCGAGCTCATCCAGCGACATAGCCTCATCTCTCGGGGAGAGCATTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp TTGTCAGTGTGTCCCCTAAGGAAGACGTCTCCAGTGTaGAGCCCAGCTGCTCTCCAGGTTCAAGAGCGCCAT +
Preference number: 6 (lower is better)
Translates to: LSVCPLRKTSPV*SPAALQVQERH
Trigger: ATGGCGCTCTTGAACCTGGAGAGCAGCTGGGCTCAACACTGGAGACGTCTTCCTTAGGGGACACACTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp GCAGAGGTGCAGGAGACGTTGACAATCATGCTGACATaGACGTCGCTCTCATCAGCCACCGAGCGATTCAGG +
Preference number: 6 (lower is better)
Translates to: AEVQETLTIMLT*TSLSSATERFR
Trigger: CCTGAATCGCTCGGTGGCTGATGAGAGCGACGTCAATGTCAGCATGATTGTCAACGTCTCCTGCACCTCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp TCGCTGTCGTCTTCGTCATCAGTGCAAGCAGAGGTGCAGGAGACGTaGACAATCATGCTGACATTGACGTCGCTCTCATCAGCCACCGAG +
Preference number: 6 (lower is better)
Translates to: SLSSSSSVQAEVQET*TIMLTLTSLSSATE
Trigger: CTCGGTGGCTGATGAGAGCGACGTCAATGTCAGCATGATTGTCAACGTCTCCTGCACCTCTGCTTGCACTGATGACGAAGACGACAGCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp CGCTCTCATCAGCCACCGAGCGATTCAGGCGCTTCCTaGATGATGCGTTGGACTCTGGGACCTTGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: RSHQPPSDSGAS*MMRWTLGPCFC
Trigger: ACAAAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAAGCGCCTGAATCGCTCGGTGGCTGATGAGAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp GCGTTCAGATTACAAGTGTCCCGGTCATCCAGAAGGTaGTGGCACAACCTCAGAATGGAGGCCACTCCTCTA +
Preference number: 6 (lower is better)
Translates to: AFRLQVSRSSRR*WHNLRMEATPL
Trigger: TAGAGGAGTGGCCTCCATTCTGAGGTTGTGCCAGCACCTTCTGGATGACCGGGACACTTGTAATCTGAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp TTCAGATTACAAGTGTCCCGGTCATCCAGAAGGTGCTaGCACAACCTCAGAATGGAGGCCACTCCTCTACGC +
Preference number: 6 (lower is better)
Translates to: FRLQVSRSSRRC*HNLRMEATPLR
Trigger: GCGTAGAGGAGTGGCCTCCATTCTGAGGTTGTGCCAGCACCTTCTGGATGACCGGGACACTTGTAATCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp CAGTCCTGCTTTGTGAGACGCAATGAGCTCAAGAAGTaGGTGTCCTTCTTCCTCCACGGCTTCCTTGAGGGC +
Preference number: 6 (lower is better)
Translates to: QSCFVRRNELKK*VSFFLHGFLEG
Trigger: GCCCTCAAGGAAGCCGTGGAGGAAGAAGGACACCAACTTCTTGAGCTCATTGCGTCTCACAAAGCAGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp CACATTGGCTGCGTCTCCCATTTGTGGGTCCAGATGTaGTGTTTCAGGGTTACTCGGGGACCCATCGACCAT +
Preference number: 6 (lower is better)
Translates to: HIGCVSHLWVQM*CFRVTRGPIDH
Trigger: ATGGTCGATGGGTCCCCGAGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp TCTTGCTACCACTGGTATACTGCTCGCTGTACAGCTTaGGGGACATCTGCTCCACAGCGTCTCTCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: SCYHWYTARCTA*GTSAPQRLSEL
Trigger: AAGCTCAGAGAGACGCTGTGGAGCAGATGTCCCTCAAGCTGTACAGCGAGCAGTATACCAGTGGTAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp CTTTGCATCATCAGCTCCCTTCTGAGGGGAAAGTCCTaGAAGAGGCACCGTGTCTGTCTCATCACGGAACAC +
Preference number: 6 (lower is better)
Translates to: LCIISSLLRGKS*KRHRVCLITEH
Trigger: GTGTTCCGTGATGAGACAGACACGGTGCCTCTTTCAGGACTTTCCCCTCAGAAGGGAGCTGATGATGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp TTCAGGGAGAACTCCGTCTCAAGGAGGGCATGGATCTaGTCCACGTGGTCGGAAATATCCTCGCAAATATCC +
Preference number: 6 (lower is better)
Translates to: FRENSVSRRAWI*STWSEISSQIS
Trigger: GGATATTTGCGAGGATATTTCCGACCACGTGGAGCAGATCCATGCCCTCCTTGAGACGGAGTTCTCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp CATCAGAAAGAATGTCACTCAGGGGCCCAGATTCAATaGTCTCCCCGAGAGATGAGGCTATGTCGCTGGATG +
Preference number: 6 (lower is better)
Translates to: HQKECHSGAQIQ*SPREMRLCRWM
Trigger: CATCCAGCGACATAGCCTCATCTCTCGGGGAGAGCATTGAATCTGGGCCCCTGAGTGACATTCTTTCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp TCCTCCACAGACACATCAGTAGCCAGTATCTCGGCTTaGATGGTGTCCAGGGCTCTGAGAATCCAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: SSTDTSVASISA*MVSRALRIQLC
Trigger: ACACAGCTGGATTCTCAGAGCCCTGGACACCATCAAAGCCGAGATACTGGCTACTGATGTGTCTGTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp CATGTCCTTCAGTCCTGCTTTGTGAGACGCAATGAGCTCAAGAAGTaGGTGTCCTTCTTCCTCCACGGCTTCCTTGAGGGCACAGTGACT +
Preference number: 6 (lower is better)
Translates to: HVLQSCFVRRNELKK*VSFFLHGFLEGTVT
Trigger: AGTCACTGTGCCCTCAAGGAAGCCGTGGAGGAAGAAGGACACCAACTTCTTGAGCTCATTGCGTCTCACAAAGCAGGACTGAAGGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp CCCACCGAATGCGCTTTCGACATGTCGGCAAACTCTTCTTTCCTCTaGCTACCACTGGTATACTGCTCGCTGTACAGCTTGAGGGACATC +
Preference number: 6 (lower is better)
Translates to: PTECAFDMSANSSFL*LPLVYCSLYSLRDI
Trigger: GATGTCCCTCAAGCTGTACAGCGAGCAGTATACCAGTGGTAGCAAGAGGAAAGAAGAGTTTGCCGACATGTCGAAAGCGCATTCGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp TTGCTCCAGCACATTGGCTGCGTCTCCCATTTGTGGGTCCAGATGTaGTGTTTCAGGGTTACTCGGGGACCCATCGACCATACTGAACAA +
Preference number: 6 (lower is better)
Translates to: LLQHIGCVSHLWVQM*CFRVTRGPIDHTEQ
Trigger: TTGTTCAGTATGGTCGATGGGTCCCCGAGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp TCATCGCTGCTACTCAGTTCGGTAAGAGATGCCGGCGAGTCTTCATaGATAGAGGATGCGACATCCAGTGACATCTGGCCACTGAAGGAC +
Preference number: 6 (lower is better)
Translates to: SSLLLSSVRDAGESS*IEDATSSDIWPLKD
Trigger: GTCCTTCAGTGGCCAGATGTCACTGGATGTCGCATCCTCTATCAATGAAGACTCGCCGGCATCTCTTACCGAACTGAGTAGCAGCGATGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp CTCTCATCAGCCACCGAGCGATTCAGGCGCTTCCTGAATGATGCGTaGGACTCTGGGACCTTGTTTTTGTGTAACACAATGTCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: LSSATERFRRFLNDA*DSGTLFLCNTMSSE
Trigger: CTCGGAGGACATTGTGTTACACAAAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAAGCGCCTGAATCGCTCGGTGGCTGATGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp TCATGTCCACCTCTGTGGTCCTCTGAAAGGATCACTTaGGATGAGTCCTCATTGGCTGCTCCACAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: SCPPLWSSERIT*DESSLAAPQLE
Trigger: TTCCAGCTGTGGAGCAGCCAATGAGGACTCATCTCAAGTGATCCTTTCAGAGGACCACAGAGGTGGACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp GGTATTTTGCACAGGGACACCTCGGCCAAGGTCTTGTaGGGCTTTTTCAGTCGCGGTTTCTCTTTATGGCAG +
Preference number: 6 (lower is better)
Translates to: GILHRDTSAKVL*GFFSRGFSLWQ
Trigger: CTGCCATAAAGAGAAACCGCGACTGAAAAAGCCTCACAAGACCTTGGCCGAGGTGTCCCTGTGCAAAATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp GTGTTTCAGGGTTACTCGGGGACCCATCGACCATACTaGACAAGCTCATGTCGGAGTTGGTTGGCATCTCAT +
Preference number: 6 (lower is better)
Translates to: VFQGYSGTHRPY*TSSCRSWLASH
Trigger: ATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAGTATGGTCGATGGGTCCCCGAGTAACCCTGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp AGAGAGCTCATCGCTGCTACTCAGTTCGGTAAGAGATaGCGGCGAGTCTTCATTGATAGAGGATGCGACATC +
Preference number: 6 (lower is better)
Translates to: RELIAATQFGKR*RRVFIDRGCDI
Trigger: GATGTCGCATCCTCTATCAATGAAGACTCGCCGGCATCTCTTACCGAACTGAGTAGCAGCGATGAGCTCTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 72 bp TTTTTGCTCCAGCACATTGGCTGCGTCTCCCATTTGTaGGTCCAGATGTTGTGTTTCAGGGTTACTCGGGGA +
Preference number: 6 (lower is better)
Translates to: FLLQHIGCVSHL*VQMLCFRVTRG
Trigger: TCCCCGAGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp CTACTCAGTTCGGTAAGAGATGCCGGCGAGTCTTCATaGATAGAGGATGCGACATCCAGTGACATCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LLSSVRDAGESS*IEDATSSDIWP
Trigger: TGGCCAGATGTCACTGGATGTCGCATCCTCTATCAATGAAGACTCGCCGGCATCTCTTACCGAACTGAGTAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp GCCACCGAGCGATTCAGGCGCTTCCTGAATGATGCGTaGGACTCTGGGACCTTGTTTTTGTGTAACACAATG +
Preference number: 6 (lower is better)
Translates to: ATERFRRFLNDA*DSGTLFLCNTM
Trigger: CATTGTGTTACACAAAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAAGCGCCTGAATCGCTCGGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp TCAACACAAGCTTCAAAGAAGCAGTCCACGTCTTCCTaGTCATCTAAGCCAGAGTCCACGGTGTCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: STQASKKQSTSS*SSKPESTVSGG
Trigger: GCCACCAGACACCGTGGACTCTGGCTTAGATGACAAGGAAGACGTGGACTGCTTCTTTGAAGCTTGTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp GATGGTGTCCAGGGCTCTGAGAATCCAGCTGTGTTGCCGTTTGATTaGCCTCTGCAGCTCCTTCCATTGACTTGCAATCATCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: DGVQGSENPAVLPFD*PLQLLPLTCNHLQH
Trigger: ATGCTGAAGATGATTGCAAGTCAATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACACAGCTGGATTCTCAGAGCCCTGGACACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp TATCTCGGCTTTGATGGTGTCCAGGGCTCTGAGAATCCAGCTGTGTaGCCGTTTGATTTGCCTCTGCAGCTCCTTCCATTGACTTGCAAT +
Preference number: 6 (lower is better)
Translates to: YLGFDGVQGSENPAV*PFDLPLQLLPLTCN
Trigger: ATTGCAAGTCAATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACACAGCTGGATTCTCAGAGCCCTGGACACCATCAAAGCCGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp ACGCCGCTGCTTGATCTCATGACAGAGCGACTTAAAGTATTGGAGTaGTTTCTCGGCGCTCGTTCCTTCCTTCTCTTGTCTCAGACAGGA +
Preference number: 6 (lower is better)
Translates to: TPLLDLMTERLKVLE*FLGARSFLLLSQTG
Trigger: TCCTGTCTGAGACAAGAGAAGGAAGGAACGAGCGCCGAGAAACAACTCCAATACTTTAAGTCGCTCTGTCATGAGATCAAGCAGCGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp TCCTCTACGCCGCTGCTTGATCTCATGACAGAGCGACTTAAAGTATaGGAGTTGTTTCTCGGCGCTCGTTCCTTCCTTCTCTTGTCTCAG +
Preference number: 6 (lower is better)
Translates to: SSTPLLDLMTERLKV*ELFLGARSFLLLSQ
Trigger: CTGAGACAAGAGAAGGAAGGAACGAGCGCCGAGAAACAACTCCAATACTTTAAGTCGCTCTGTCATGAGATCAAGCAGCGGCGTAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp TTACTCGGGGACCCATCGACCATACTGAACAAGCTCATGTCGGAGTaGGTTGGCATCTCATTGTCTCCTTCGCTGACAATTCCACTCTCA +
Preference number: 6 (lower is better)
Translates to: LLGDPSTILNKLMSE*VGISLSPSLTIPLS
Trigger: TGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAGTATGGTCGATGGGTCCCCGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp GGGCTCTGTATGTTCTCCAGACGATTCAAAAGATCTAATGTCCTCTaGCTCAGCTCACCAACCGAGCCACTGCTCACACTTATGTCCCCA +
Preference number: 6 (lower is better)
Translates to: GLCMFSRRFKRSNVL*LSSPTEPLLTLMSP
Trigger: TGGGGACATAAGTGTGAGCAGTGGCTCGGTTGGTGAGCTGAGCAAGAGGACATTAGATCTTTTGAATCGTCTGGAGAACATACAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp TTCAGGCGCTTCCTGAATGATGCGTTGGACTCTGGGACCTTGTTTTaGTGTAACACAATGTCCTCCGAGCAAAGAGAGAGCTCATCGCTG +
Preference number: 6 (lower is better)
Translates to: FRRFLNDALDSGTLF*CNTMSSEQRESSSL
Trigger: CAGCGATGAGCTCTCTCTTTGCTCGGAGGACATTGTGTTACACAAAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAAGCGCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp GAGCGATTCAGGCGCTTCCTGAATGATGCGTTGGACTCTGGGACCTaGTTTTTGTGTAACACAATGTCCTCCGAGCAAAGAGAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: ERFRRFLNDALDSGT*FLCNTMSSEQRESS
Trigger: TGAGCTCTCTCTTTGCTCGGAGGACATTGTGTTACACAAAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAAGCGCCTGAATCGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp TCCAGTTTCAGAGCTAACACCTCCGTTTGTTTGAGGTaGGATGGCAGCGCTAGGTATTCATCAGAGCCGTAC +
Preference number: 6 (lower is better)
Translates to: SSFRANTSVCLR*DGSARYSSEPY
Trigger: GTACGGCTCTGATGAATACCTAGCGCTGCCATCTCACCTCAAACAAACGGAGGTGTTAGCTCTGAAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp GGTTCTCCAGTTTCAGAGCTAACACCTCCGTTTGTTTaGGGTGAGATGGCAGCGCTAGGTATTCATCAGAGC +
Preference number: 6 (lower is better)
Translates to: GSPVSELTPPFV*GEMAALGIHQS
Trigger: GCTCTGATGAATACCTAGCGCTGCCATCTCACCTCAAACAAACGGAGGTGTTAGCTCTGAAACTGGAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp TGTCCTTCTTCCTCCACGGCTTCCTTGAGGGCACAGTaGCTGTCTACGTTCAACTTAAAGCTCAAGTGTGTC +
Preference number: 6 (lower is better)
Translates to: CPSSSTASLRAQ*LSTFNLKLKCV
Trigger: GACACACTTGAGCTTTAAGTTGAACGTAGACAGTCACTGTGCCCTCAAGGAAGCCGTGGAGGAAGAAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp ATGGAGGCCACTCCTCTACGCCGCTGCTTGATCTCATaGCAGAGCGACTTAAAGTATTGGAGTTGTTTCTCG +
Preference number: 6 (lower is better)
Translates to: MEATPLRRCLIS*QSDLKYWSCFS
Trigger: CGAGAAACAACTCCAATACTTTAAGTCGCTCTGTCATGAGATCAAGCAGCGGCGTAGAGGAGTGGCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp ACTGTGCCTGTGAACTTGGGGCTGCTTTTTAGAAACTaGGTGTGGCTGTCCTCGTGGAACTCAACATTGTGG +
Preference number: 6 (lower is better)
Translates to: TVPVNLGLLFRN*VWLSSWNSTLW
Trigger: CCACAATGTTGAGTTCCACGAGGACAGCCACACTCAGTTTCTAAAAAGCAGCCCCAAGTTCACAGGCACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp TGTCGGAGTTGGTTGGCATCTCATTGTCTCCTTCGCTaGCAATTCCACTCTCACTGCCTGAATTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: CRSWLASHCLLR*QFHSHCLNSGS
Trigger: TGAGCCAGAATTCAGGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp ATAAAAGGGAGAGCTGTCGGGCATTCTGGATGCCCGTaGGTGCCTTCTCTATGTCGCTACTTTTGTATGAGC +
Preference number: 6 (lower is better)
Translates to: IKGRAVGHSGCP*VPSLCRYFCMS
Trigger: GCTCATACAAAAGTAGCGACATAGAGAAGGCACTCACGGGCATCCAGAATGCCCGACAGCTCTCCCTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp CGGCGAGTCTTCATTGATAGAGGATGCGACATCCAGTaGCATCTGGCCACTGAAGGACATCTTTTGGGAACT +
Preference number: 6 (lower is better)
Translates to: RRVFIDRGCDIQ*HLATEGHLLGT
Trigger: AGTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCACTGGATGTCGCATCCTCTATCAATGAAGACTCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp ATGGTCGGCACGACTGAGCTCCTGGTATTCTCGGATTaGTTTCCTGAACCAGTTCCCCGTTTAGGTATTTTG +
Preference number: 6 (lower is better)
Translates to: MVGTTELLVFSD*FPEPVPRLGIL
Trigger: CAAAATACCTAAACGGGGAACTGGTTCAGGAAAGCAATCCGAGAATACCAGGAGCTCAGTCGTGCCGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp GCAAACTCTTCTTTCCTCTTGCTACCACTGGTATACTaGTCGCTGTACAGCTTGAGGGACATCTGCTCCACA +
Preference number: 6 (lower is better)
Translates to: ANSSFLLLPLVY*SLYSLRDICST
Trigger: TGTGGAGCAGATGTCCCTCAAGCTGTACAGCGAGCAGTATACCAGTGGTAGCAAGAGGAAAGAAGAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp GAATCAAAGTCCAGAAGCCCATTGCTTCCCACCGAATaGGCTTTCGACATGTCGGCAAACTCTTCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: ESKSRSPLLPTE*AFDMSANSSFL
Trigger: GAGGAAAGAAGAGTTTGCCGACATGTCGAAAGCGCATTCGGTGGGAAGCAATGGGCTTCTGGACTTTGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp GCTCCTGATATTCTGAATCAAAGTCCAGAAGCCCATTaGTTCCCACCGAATGCGCTTTCGACATGTCGGCAA +
Preference number: 6 (lower is better)
Translates to: APDILNQSPEAH*FPPNALSTCRQ
Trigger: TTGCCGACATGTCGAAAGCGCATTCGGTGGGAAGCAATGGGCTTCTGGACTTTGATTCAGAATATCAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp GGAGTCCTTGTGGTGTGTCTCTTCAAGTTTCACTGTTaGGACCATAGGCTCCAGGTCTTGATCAAGGTCGTT +
Preference number: 6 (lower is better)
Translates to: GVLVVCLFKFHC*DHRLQVLIKVV
Trigger: AACGACCTTGATCAAGACCTGGAGCCTATGGTCCCAACAGTGAAACTTGAAGAGACACACCACAAGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp CAGGGCTCTGAGAATCCAGCTGTGTTGCCGTTTGATTaGCCTCTGCAGCTCCTTCCATTGACTTGCAATCAT +
Preference number: 6 (lower is better)
Translates to: QGSENPAVLPFD*PLQLLPLTCNH
Trigger: ATGATTGCAAGTCAATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACACAGCTGGATTCTCAGAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp CCGCTGCTTGATCTCATGACAGAGCGACTTAAAGTATaGGAGTTGTTTCTCGGCGCTCGTTCCTTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: PLLDLMTERLKV*ELFLGARSFLL
Trigger: GAGAAGGAAGGAACGAGCGCCGAGAAACAACTCCAATACTTTAAGTCGCTCTGTCATGAGATCAAGCAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp CTGAACAAGCTCATGTCGGAGTTGGTTGGCATCTCATaGTCTCCTTCGCTGACAATTCCACTCTCACTGCCT +
Preference number: 6 (lower is better)
Translates to: LNKLMSELVGIS*SPSLTIPLSLP
Trigger: AGGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp TCTTCGTCATCAGTGCAAGCAGAGGTGCAGGAGACGTaGACAATCATGCTGACATTGACGTCGCTCTCATCA +
Preference number: 6 (lower is better)
Translates to: SSSSVQAEVQET*TIMLTLTSLSS
Trigger: TGATGAGAGCGACGTCAATGTCAGCATGATTGTCAACGTCTCCTGCACCTCTGCTTGCACTGATGACGAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp TCATCCGTTGCGATACTGGAGTCGTCATCCTCATCTTaGAGACACAGCTCTTCTTCCGTCAAGGTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: SSVAILESSSSS*RHSSSSVKVRV
Trigger: CACTCTCACCTTGACGGAAGAAGAGCTGTGTCTCAAAGATGAGGATGACGACTCCAGTATCGCAACGGATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp TCGACCATACTGAACAAGCTCATGTCGGAGTTGGTTGGCATCTCATaGTCTCCTTCGCTGACAATTCCACTCTCACTGCCTGAATTCTGG +
Preference number: 6 (lower is better)
Translates to: STILNKLMSELVGIS*SPSLTIPLSLPEFW
Trigger: CCAGAATTCAGGCAGTGAGAGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAGTATGGTCGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp CTCATCTTTAAATTTTTGCTCCAGCACATTGGCTGCGTCTCCCATTaGTGGGTCCAGATGTTGTGTTTCAGGGTTACTCGGGGACCCATC +
Preference number: 6 (lower is better)
Translates to: LIFKFLLQHIGCVSH*WVQMLCFRVTRGPI
Trigger: GATGGGTCCCCGAGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAATTTAAAGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp TCTCCGTGGTCTCCATGGCTTCGTTTAGCCACTGAATaGATTCGTCCAGCTTGTTCACAAACCCCTCAATTC +
Preference number: 6 (lower is better)
Translates to: SPWSPWLRLATE*IRPACSQTPQF
Trigger: GAATTGAGGGGTTTGTGAACAAGCTGGACGAATTCATTCAGTGGCTAAACGAAGCCATGGAGACCACGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp CATGTCAATCAGCCAATCCCAGAGCTCCTGATATTCTaGATCAAAGTCCAGAAGCCCATTGCTTCCCACCGA +
Preference number: 6 (lower is better)
Translates to: HVNQPIPELLIF*IKVQKPIASHR
Trigger: TCGGTGGGAAGCAATGGGCTTCTGGACTTTGATTCAGAATATCAGGAGCTCTGGGATTGGCTGATTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp TTCCCATTTACACAACCCACTGGTGAGACAGATGCCTaGGAGACACTTGAAAGCTTAATGCACTCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: FPFTQPTGETDA*ETLESLMHSPS
Trigger: TGAGGGGGAGTGCATTAAGCTTTCAAGTGTCTCTCAGGCATCTGTCTCACCAGTGGGTTGTGTAAATGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp TGCCAAGATCTTTTCATGGAGGGGCGCGTCTGGTTGTaGCTCAGAAGTCTGATGTTTAGGTTTGCAGGACTT +
Preference number: 6 (lower is better)
Translates to: CQDLFMEGRVWL*LRSLMFRFAGL
Trigger: AAGTCCTGCAAACCTAAACATCAGACTTCTGAGTCACAACCAGACGCGCCCCTCCATGAAAAGATCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp TCAGATTCTTTTCCCATCTTCTTTCGTAACCGTGTTTaGCACTGGACAGCTTGCATGACGATGGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: SDSFPIFFRNRV*HWTACMTMASH
Trigger: GTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGATGGGAAAAGAATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp GAAGCAGCGTTTTCTTCTGGCGTTCCTGATACACTTTaGTTTCTTGAACTCCCCTCTCTCTTGGCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: EAAFSSGVPDTL*FLELPSLLAFP
Trigger: AGGAAAGGCCAAGAGAGAGGGGAGTTCAAGAAAGCAAAGTGTATCAGGAACGCCAGAAGAAAACGCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 72 bp TCTTTTCCCATCTTCTTTCGTAACCGTGTTTGCCACTaGACAGCTTGCATGACGATGGCTTCCCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: SFPIFFRNRVCH*TACMTMASHLL
Trigger: AAGAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGATGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp CTGGCTGTCATTTGTTCTGGCTTAGCAGCTTCATCCTaGACTTCTGATTCATTTGGAAGGGCACTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: LAVICSGLAASS*TSDSFGRALER
Trigger: TCTCTCCAGTGCCCTTCCAAATGAATCAGAAGTCCAGGATGAAGCTGCTAAGCCAGAACAAATGACAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp GTGTTGCCGTTTGATTTGCCTCTGCAGCTCCTTCCATaGACTTGCAATCATCTTCAGCATGTCCTTCAGTCC +
Preference number: 6 (lower is better)
Translates to: VLPFDLPLQLLP*TCNHLQHVLQS
Trigger: GGACTGAAGGACATGCTGAAGATGATTGCAAGTCAATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp GACCCATCGACCATACTGAACAAGCTCATGTCGGAGTaGGTTGGCATCTCATTGTCTCCTTCGCTGACAATT +
Preference number: 6 (lower is better)
Translates to: DPSTILNKLMSE*VGISLSPSLTI
Trigger: AATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAGTATGGTCGATGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp AAATTTTTGCTCCAGCACATTGGCTGCGTCTCCCATTaGTGGGTCCAGATGTTGTGTTTCAGGGTTACTCGG +
Preference number: 6 (lower is better)
Translates to: KFLLQHIGCVSH*WVQMLCFRVTR
Trigger: CCGAGTAACCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp CACTCCCCCTCATCTTTAAATTTTTGCTCCAGCACATaGGCTGCGTCTCCCATTTGTGGGTCCAGATGTTGT +
Preference number: 6 (lower is better)
Translates to: HSPSSLNFCSST*AASPICGSRCC
Trigger: ACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAATTTAAAGATGAGGGGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp AGGCGCTTCCTGAATGATGCGTTGGACTCTGGGACCTaGTTTTTGTGTAACACAATGTCCTCCGAGCAAAGA +
Preference number: 6 (lower is better)
Translates to: RRFLNDALDSGT*FLCNTMSSEQR
Trigger: TCTTTGCTCGGAGGACATTGTGTTACACAAAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAAGCGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp GAGGGATTGGCCCTCTCGGTACTTCCTCCATCTTTATaGACCTTTATTTCATCAGTGACACTGGGCCGTTTC +
Preference number: 6 (lower is better)
Translates to: EGLALSVLPPSL*TFISSVTLGRF
Trigger: GAAACGGCCCAGTGTCACTGATGAAATAAAGGTCAATAAAGATGGAGGAAGTACCGAGAGGGCCAATCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp AATCCAGCTGTGTTGCCGTTTGATTTGCCTCTGCAGCTCCTTCCATaGACTTGCAATCATCTTCAGCATGTCCTTCAGTCCTGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: NPAVLPFDLPLQLLP*TCNHLQHVLQSCFV
Trigger: CACAAAGCAGGACTGAAGGACATGCTGAAGATGATTGCAAGTCAATGGAAGGAGCTGCAGAGGCAAATCAAACGGCAACACAGCTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp TTGAAGATGAAAAGCTCTGTATCTCTTAGCCACCTTTTCAGCTCTTaGATCCTGACCTCCAGCTGCCTTACCAGGCTTCCGCTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: LKMKSSVSLSHLFSS*ILTSSCLTRLPLSG
Trigger: TCCTGAAAGCGGAAGCCTGGTAAGGCAGCTGGAGGTCAGGATCAAAGAGCTGAAAAGGTGGCTAAGAGATACAGAGCTTTTCATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 90 bp AGCTTAATGCACTCCCCCTCATCTTTAAATTTTTGCTCCAGCACATaGGCTGCGTCTCCCATTTGTGGGTCCAGATGTTGTGTTTCAGGG +
Preference number: 6 (lower is better)
Translates to: SLMHSPSSLNFCSST*AASPICGSRCCVSG
Trigger: CCCTGAAACACAACATCTGGACCCACAAATGGGAGACGCAGCCAATGTGCTGGAGCAAAAATTTAAAGATGAGGGGGAGTGCATTAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp ATGGAGCAATTTAGAAGGGCCTCAATGTCCAGGGTGTCCGAGGGATaGGCCCTCTCGGTACTTCCTCCATCTTTATTGACCTTTATTTCA +
Preference number: 6 (lower is better)
Translates to: MEQFRRASMSRVSEG*ALSVLPPSLLTFIS
Trigger: TGAAATAAAGGTCAATAAAGATGGAGGAAGTACCGAGAGGGCCAATCCCTCGGACACCCTGGACATTGAGGCCCTTCTAAATTGCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp TCTTTCGTAACCGTGTTTGCCACTGGACAGCTTGCATaGCGATGGCTTCCCACCTTCTTTCAAGGTTTACAA +
Preference number: 6 (lower is better)
Translates to: SFVTVFATGQLA*RWLPTFFQGLQ
Trigger: TTGTAAACCTTGAAAGAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp ATCTTCTTTCGTAACCGTGTTTGCCACTGGACAGCTTaGATGACGATGGCTTCCCACCTTCTTTCAAGGTTT +
Preference number: 6 (lower is better)
Translates to: IFFRNRVCHWTA*MTMASHLLSRF
Trigger: AAACCTTGAAAGAAGGTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS GCA 72 bp TGTTCTCCAGACGATTCAAAAGATCTAATGTCCTCTTaGTCAGCTCACCAACCGAGCCACTGCTCACACTTA +
Preference number: 6 (lower is better)
Translates to: CSPDDSKDLMSS*SAHQPSHCSHL
Trigger: TAAGTGTGAGCAGTGGCTCGGTTGGTGAGCTGAGCAAGAGGACATTAGATCTTTTGAATCGTCTGGAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp AAATCTCCCTTCCTCAGGTGTATGGGCCGATGCGAATaGTCTAACACTTTCTCCTTAATTTGGGTCAGTGAC +
Preference number: 6 (lower is better)
Translates to: KSPFLRCMGRCE*SNTFSLIWVSD
Trigger: GTCACTGACCCAAATTAAGGAGAAAGTGTTAGAGCATTCGCATCGGCCCATACACCTGAGGAAGGGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp ATAGATTCTTTTCCCATCTTCTTTCGTAACCGTGTTTaGCACTGGACAGCTTGCATGACGATGGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: IDSFPIFFRNRV*HWTACMTMASH
Trigger: GTGGGAAGCCATCGTCATGCAAGCTGTCCAGTGGCAAACACGGTTACGAAAGAAGATGGGAAAAGAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219786.2
CDS CCA 72 bp ATCGACCATACTGAACAAGCTCATGTCGGAGTTGGTTaGCATCTCATTGTCTCCTTCGCTGACAATTCCACT +
Preference number: 6 (lower is better)
Translates to: IDHTEQAHVGVG*HLIVSFADNST
Trigger: AGTGGAATTGTCAGCGAAGGAGACAATGAGATGCCAACCAACTCCGACATGAGCTTGTTCAGTATGGTCGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 72 bp TCTTCATTGATAGAGGATGCGACATCCAGTGACATCTaGCCACTGAAGGACATCTTTTGGGAACTGCTTTGC +
Preference number: 6 (lower is better)
Translates to: SSLIEDATSSDI*PLKDIFWELLC
Trigger: GCAAAGCAGTTCCCAAAAGATGTCCTTCAGTGGCCAGATGTCACTGGATGTCGCATCCTCTATCAATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp ATGTTCTCCAGACGATTCAAAAGATCTAATGTCCTCTaGCTCAGCTCACCAACCGAGCCACTGCTCACACTT +
Preference number: 6 (lower is better)
Translates to: MFSRRFKRSNVL*LSSPTEPLLTL
Trigger: AAGTGTGAGCAGTGGCTCGGTTGGTGAGCTGAGCAAGAGGACATTAGATCTTTTGAATCGTCTGGAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp TTCCTGAATGATGCGTTGGACTCTGGGACCTTGTTTTaGTGTAACACAATGTCCTCCGAGCAAAGAGAGAGC +
Preference number: 6 (lower is better)
Translates to: FLNDALDSGTLF*CNTMSSEQRES
Trigger: GCTCTCTCTTTGCTCGGAGGACATTGTGTTACACAAAAACAAGGTCCCAGAGTCCAACGCATCATTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp ACACTGGGCCGTTTCTTTTCTCTCGACAAGGAAAGTTaGGGTCTTATCCACGTCTGCAGTTCGTTCTTGATG +
Preference number: 6 (lower is better)
Translates to: TLGRFFSLDKES*GLIHVCSSFLM
Trigger: CATCAAGAACGAACTGCAGACGTGGATAAGACCCAAACTTTCCTTGTCGAGAGAAAAGAAACGGCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp ATGCTTCATACTCGTCGTGCTTGGATTCAGAAATCTTTTTCACATTaGAAGCAAGGTTCGCTGATGCCTCTGGGATCTCTGGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: MLHTRRAWIQKSFSH*KQGSLMPLGSLASP
Trigger: AGGAGAAGCCAGAGATCCCAGAGGCATCAGCGAACCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp ACGTGGTCGGAAATATCCTCGCAAATATCCTTTAGCTaGACTAGATGCACATCCACATGCTTGCTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: TWSEISSQISFS*TRCTSTCLLSA
Trigger: TGCAGACAGCAAGCATGTGGATGTGCATCTAGTTCAGCTAAAGGATATTTGCGAGGATATTTCCGACCACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS TCA 72 bp TCAAGTTTCACTGTTGGGACCATAGGCTCCAGGTCTTaGTCAAGGTCGTTGGATTCTTCATGCACACTAATG +
Preference number: 6 (lower is better)
Translates to: SSFTVGTIGSRS*SRSLDSSCTLM
Trigger: CATTAGTGTGCATGAAGAATCCAACGACCTTGATCAAGACCTGGAGCCTATGGTCCCAACAGTGAAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp TATGTCGATCTTCATGAAAGCTTACGAGCTTCTCTTTaGAGGTTAAAGTTTGGGGGCTGGGATACAGTGCAG +
Preference number: 6 (lower is better)
Translates to: YVDLHESLRASL*RLKFGGWDTVQ
Trigger: CTGCACTGTATCCCAGCCCCCAAACTTTAACCTGCAAAGAGAAGCTCGTAAGCTTTCATGAAGATCGACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp TCGTTCTTAAGAGTTTCTTTTAGAAATAGCCCTCTTTaGGGCAATGTGGGCTGCGTGGGAGAGTCCTCGTTA +
Preference number: 6 (lower is better)
Translates to: SFLRVSFRNSPL*GNVGCVGESSL
Trigger: TAACGAGGACTCTCCCACGCAGCCCACATTGCCCAAAAGAGGGCTATTTCTAAAAGAAACTCTTAAGAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp GGTAGTGAAAGGCCACCTTTCTTCAAAGCTTCAACCTaGCTAAGTAGCTCTGTCTTTTTCAGGTGCCTGATG +
Preference number: 6 (lower is better)
Translates to: GSERPPFFKAST*LSSSVFFRCLM
Trigger: CATCAGGCACCTGAAAAAGACAGAGCTACTTAGCAAGGTTGAAGCTTTGAAGAAAGGTGGCCTTTCACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp TTGGAGTTGTTTCTCGGCGCTCGTTCCTTCCTTCTCTaGTCTCAGACAGGAATTGAAGATGAAAAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: LELFLGARSFLL*SQTGIEDEKLC
Trigger: ACAGAGCTTTTCATCTTCAATTCCTGTCTGAGACAAGAGAAGGAAGGAACGAGCGCCGAGAAACAACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp CTTGATCTCATGACAGAGCGACTTAAAGTATTGGAGTaGTTTCTCGGCGCTCGTTCCTTCCTTCTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LDLMTERLKVLE*FLGARSFLLLS
Trigger: AGACAAGAGAAGGAAGGAACGAGCGCCGAGAAACAACTCCAATACTTTAAGTCGCTCTGTCATGAGATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CAA 72 bp ACTCGTCGTGCTTGGATTCAGAAATCTTTTTCACATTaGAAGCAAGGTTCGCTGATGCCTCTGGGATCTCTG +
Preference number: 6 (lower is better)
Translates to: TRRAWIQKSFSH*KQGSLMPLGSL
Trigger: CAGAGATCCCAGAGGCATCAGCGAACCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp GGCTGGGATACAGTGCAGCCTTGCCTTTTGGCTGTTTaGCATTCAAAGAGAAAGCTTGAATTTTCGGTTTGG +
Preference number: 6 (lower is better)
Translates to: GWDTVQPCLLAV*HSKRKLEFSVW
Trigger: CCAAACCGAAAATTCAAGCTTTCTCTTTGAATGCAAAACAGCCAAAAGGCAAGGCTGCACTGTATCCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp CGAAGAAGGGGATCCTCCAAATGTGCCTTCTCACTCTaGGGCTGTTTCATTATCATTGGGAATTTGAGTTTT +
Preference number: 6 (lower is better)
Translates to: RRRGSSKCAFSL*GCFIIIGNLSF
Trigger: AAAACTCAAATTCCCAATGATAATGAAACAGCCGCAGAGTGAGAAGGCACATTTGGAGGATCCCCTTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp AAAATAGAAACCACGAAGAAGGGGATCCTCCAAATGTaGCTTCTCACTCTGCGGCTGTTTCATTATCATTGG +
Preference number: 6 (lower is better)
Translates to: KIETTKKGILQM*LLTLRLFHYHW
Trigger: CCAATGATAATGAAACAGCCGCAGAGTGAGAAGGCACATTTGGAGGATCCCCTTCTTCGTGGTTTCTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 72 bp TCTTGCCATTCCCATTGTTTTCAGAGAGACGTTTTATaGAGCAATTTAGAAGGGCCTCAATGTCCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: SCHSHCFQRDVL*SNLEGPQCPGC
Trigger: ACACCCTGGACATTGAGGCCCTTCTAAATTGCTCCATAAAACGTCTCTCTGAAAACAATGGGAATGGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp GATGCCTATCATTTGGGGGACCAAATTCCTTCCCAGTaGCACTTGAATCATCAGAACCATCCATTAATGCTT +
Preference number: 6 (lower is better)
Translates to: DAYHLGDQIPSQ*HLNHQNHPLML
Trigger: AAGCATTAATGGATGGTTCTGATGATTCAAGTGTCACTGGGAAGGAATTTGGTCCCCCAAATGATAGGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp ATATCATTTGGTAGTGAAAGGCCACCTTTCTTCAAAGCTTCAACCTaGCTAAGTAGCTCTGTCTTTTTCAGGTGCCTGATGGACATTTCC +
Preference number: 6 (lower is better)
Translates to: ISFGSERPPFFKAST*LSSSVFFRCLMDIS
Trigger: GGAAATGTCCATCAGGCACCTGAAAAAGACAGAGCTACTTAGCAAGGTTGAAGCTTTGAAGAAAGGTGGCCTTTCACTACCAAATGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp CCAGCTTGTTCACAAACCCCTCAATTCTTTCCCAGATaGCTTCATAGTTATCTTGGTGCTGAATATCTTTCA +
Preference number: 6 (lower is better)
Translates to: PACSQTPQFFPR*LHSYLGAEYLS
Trigger: TGAAAGATATTCAGCACCAAGATAACTATGAAGCCATCTGGGAAAGAATTGAGGGGTTTGTGAACAAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095737.5
ENSMUST00000219786.2
CDS CCA 72 bp TCTTATTTTCACCTTTGGTTCCTAAGTCATGAGTTCTaGGTGGGTTCTTGCCATTCCCATTGTTTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: SYFHLWFLSHEF*VGSCHSHCFQR
Trigger: TCTCTGAAAACAATGGGAATGGCAAGAACCCACCCAGAACTCATGACTTAGGAACCAAAGGTGAAAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp ACAAAGTCATGTACCGAACAATCTTCATCATCTTTCTaGTGGAAAACATCTGGCTTGCAGTTGCAACAGGAA +
Preference number: 6 (lower is better)
Translates to: TKSCTEQSSSSF*WKTSGLQLQQE
Trigger: TTCCTGTTGCAACTGCAAGCCAGATGTTTTCCATCAGAAAGATGATGAAGATTGTTCGGTACATGACTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 90 bp CTTGAATCATCAGAACCATCCATTAATGCTTCATACTCGTCGTGCTaGGATTCAGAAATCTTTTTCACATTTGAAGCAAGGTTCGCTGAT +
Preference number: 6 (lower is better)
Translates to: LESSEPSINASYSSC*DSEIFFTFEARFAD
Trigger: ATCAGCGAACCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCATTAATGGATGGTTCTGATGATTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS TCA 72 bp CTGCGGCTGTTTCATTATCATTGGGAATTTGAGTTTTaGGCCTTGGAGGTACGAGTAGTCATAAAATGTAAA +
Preference number: 6 (lower is better)
Translates to: LRLFHYHWEFEF*ALEVRVVIKCK
Trigger: TTTACATTTTATGACTACTCGTACCTCCAAGGCTCAAAACTCAAATTCCCAATGATAATGAAACAGCCGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CCA 72 bp CAGAACCATCCATTAATGCTTCATACTCGTCGTGCTTaGATTCAGAAATCTTTTTCACATTTGAAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: QNHPLMLHTRRA*IQKSFSHLKQG
Trigger: ACCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCATTAATGGATGGTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS CAA 72 bp TCAGAACCATCCATTAATGCTTCATACTCGTCGTGCTaGGATTCAGAAATCTTTTTCACATTTGAAGCAAGG +
Preference number: 6 (lower is better)
Translates to: SEPSINASYSSC*DSEIFFTFEAR
Trigger: CCTTGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCATTAATGGATGGTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5
CDS GCA 72 bp TCATCAGAACCATCCATTAATGCTTCATACTCGTCGTaGTTGGATTCAGAAATCTTTTTCACATTTGAAGCA +
Preference number: 6 (lower is better)
Translates to: SSEPSINASYSS*LDSEIFFTFEA
Trigger: TGCTTCAAATGTGAAAAAGATTTCTGAATCCAAGCACGACGAGTATGAAGCATTAATGGATGGTTCTGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095737.5