RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021057

Ensembl transcript IDs: ENSMUST00000095610.9, ENSMUST00000154078.3, ENSMUST00000172992.2

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTGCATTGTCGGTGGCTCTGCCTCACCCCTGTCCTGGCTTCTGTTaGCACCTCCTTTACACACACACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: FALSVALPHPCPGFC*HLLYTHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAGGAGGTGGCAACAGAAGCCAGGACAGGGGTGAGGCAGAGCCACCGACAATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR TCA 90 bp TATTGCCTGCCACTTCCACACCTCCCCATAAGTCACTTCGCACTGTaGTCTGTGCTGACTCCCTCCAGTCCAGAACTGTGTTTCAATGAC +
Preference number: 1 (lower is better)
Translates to: YCLPLPHLPISHFAL*SVLTPSSPELCFND
Trigger: GTCATTGAAACACAGTTCTGGACTGGAGGGAGTCAGCACAGATCACAGTGCGAAGTGACTTATGGGGAGGTGTGGAAGTGGCAGGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 90 bp AGTTGCGCTGTAAAACAGGAACTTGAACCTCAAGAACTCTACAACTaGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG +
Preference number: 1 (lower is better)
Translates to: SCAVKQELEPQELYN*GWGFSSVVERLPSK
Trigger: CTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCAGTTGTAGAGTTCTTGAGGTTCAAGTTCCTGTTTTACAGCGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR TCA 90 bp TGGCTCGTCCACTTAACATTTCTACAGGCAAAGAACCGACATATGTaGCATTATCAGGCCTTCTCCTGCACCTGGTCACAAATCAGAGGA +
Preference number: 1 (lower is better)
Translates to: WLVHLTFLQAKNRHM*HYQAFSCTWSQIRG
Trigger: TCCTCTGATTTGTGACCAGGTGCAGGAGAAGGCCTGATAATGTCACATATGTCGGTTCTTTGCCTGTAGAAATGTTAAGTGGACGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR TCA 90 bp TACACACACACACACACACACACACACACACACACACACACACCCTaGAACCCAGGGCTACTATCTTACCCCCAAAATTACAAATTTACT +
Preference number: 1 (lower is better)
Translates to: YTHTHTHTHTHTHTP*NPGLLSYPQNYKFT
Trigger: AGTAAATTTGTAATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 90 bp TTTAGCCAGGCGATGATGACCCATACCTTTAATCTCGACCAGCACTaGGGAAGCAGAGGCAGTCGGAATTCTGTGAGTTCGAGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: FSQAMMTHTFNLDQH*GSRGSRNSVSSRPA
Trigger: GGCTGGCCTCGAACTCACAGAATTCCGACTGCCTCTGCTTCCCAAGTGCTGGTCGAGATTAAAGGTATGGGTCATCATCGCCTGGCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 90 bp TTTTGCATTGTCGGTGGCTCTGCCTCACCCCTGTCCTGGCTTCTGTaGCCACCTCCTTTACACACACACACACACACACACACACACACA +
Preference number: 2 (lower is better)
Translates to: FCIVGGSASPLSWLL*PPPLHTHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAGGAGGTGGCAACAGAAGCCAGGACAGGGGTGAGGCAGAGCCACCGACAATGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCACTGGGCTATTGCCTaGCACTTCCACACCTCCCCA +
Preference number: 2 (lower is better)
Translates to: THTHTHPETQGYYLTPKIHWAIA*HFHTSP
Trigger: TGGGGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCCCTCCTCAAAGCACTaGGCTATTGCCTGCCACTTC +
Preference number: 2 (lower is better)
Translates to: THTHTHPETQGYYLTPKIPSSKH*AIACHF
Trigger: GAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAATCTCGACCAGCACTTaGGAAGCAGAGGCAGTCGGA +
Preference number: 2 (lower is better)
Translates to: KRSICATCLLFLEVEGVAISTST*EAEAVG
Trigger: TCCGACTGCCTCTGCTTCCCAAGTGCTGGTCGAGAT...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGCCTCACCCCTGTCCTaGCTTCTGTTGCCACCTCCT +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYASPLS*LLLPPP
Trigger: AGGAGGTGGCAACAGAAGCCAGGACAGGGGTGAGGC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 90 bp TTCACTCACAGATGGGTATATACAGGTCTTCTGGGCAGAGGGATGTaGGGGAGAGAACACACTTCCTGTGTCCATGCCTACACATGTGTT +
Preference number: 2 (lower is better)
Translates to: FTHRWVYTGLLGRGM*GREHTSCVHAYTCV
Trigger: AACACATGTGTAGGCATGGACACAGGAAGTGTGTTCTCTCCCCAACATCCCTCTGCCCAGAAGACCTGTATATACCCATCTGTGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR GCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGAAAGCACTGGGCTATTaGCTGCCACTTCCACACCTC +
Preference number: 2 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAKALGY*LPLPHL
Trigger: GAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTT...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGCACTGTGATCTGTGCTaGCTCCCTCCAGTCCAGAAC +
Preference number: 2 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQHCDLC*LPPVQN
Trigger: GTTCTGGACTGGAGGGAGTCAGCACAGATCACAGTG...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGCCTGGTCTACAGAGTaGGTTTCAGGACAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYAWSTE*VSGQPR
Trigger: CCTTGGCTGTCCTGAAACTCACTCTGTAGACCAGGC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTTATATACAGGTCTTCTaGGCAGAGGGATGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: THTHTHPETQGYYLTPKIYIQVF*AEGCWG
Trigger: TCCCCAACATCCCTCTGCCCAGAAGACCTGTATATA...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAGAATCCTTTGCTACCTaGGAAGTTTGCCTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: KRSICATCLLFLEVEGVAESFAT*EVCLLD
Trigger: ATCCAGGAGGCAAACTTCCCAGGTAGCAAAGGATTC...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGGCGGATCTCTAAGTTaGAGGCCAGCCTGGTCTACA +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYGGSLS*RPAWST
Trigger: TGTAGACCAGGCTGGCCTCCAACTTAGAGATCCGCC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGATAAGCAGTGCTCGCTaGACAGTGGTGGCGCACGAC +
Preference number: 2 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLISSAR*TVVAHD
Trigger: GTCGTGCGCCACCACTGTCCAGCGAGCACTGCTTAT...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGCACTGTGATCTGTGCTaGCTCCCTCCAGTCCAGAAC +
Preference number: 2 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLHCDLC*LPPVQN
Trigger: GTTCTGGACTGGAGGGAGTCAGCACAGATCACAGTG...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCACACACACACACCCTaGAACCCAGGGCTACTATCT +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYHTHTP*NPGLLS
Trigger: AGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGCACACACACACACCCTaGAACCCAGGGCTACTATCT +
Preference number: 2 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLHTHTP*NPGLLS
Trigger: AGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTG...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGTGGGCAGAGGGATGTTaGGGAGAGAACACACTTCCT +
Preference number: 2 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLWAEGC*GENTLP
Trigger: AGGAAGTGTGTTCTCTCCCCAACATCCCTCTGCCCA...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATTTTACAACCTTCATTaGTCCTTTAGCACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: KRSICATCLLFLEVEGVAFYNLH*SFSTSG
Trigger: CCCAGAAGTGCTAAAGGATCAATGAAGGTTGTAAAA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTGCAGACAGCTTTTCTaGAGAGATCCATTTGTGCCA +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYCRQLF*RDPFVP
Trigger: TGGCACAAATGGATCTCTTCAGAAAAGCTGTCTGCA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCATTTGCAGATGAAATaGACTCTGGGCTGGATGCAT +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYHLQMK*TLGWMH
Trigger: ATGCATCCAGCCCAGAGTTCATTTCATCTGCAAATG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR GCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACAAAGCACTGGGCTATTaGCTGCCACTTCCACACCTC +
Preference number: 2 (lower is better)
Translates to: KPEENIFTFQPRILLNIHKALGY*LPLPHL
Trigger: GAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTT...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACTGGGCAGAGGGATGTTaGGGAGAGAACACACTTCCT +
Preference number: 2 (lower is better)
Translates to: KPEENIFTFQPRILLNIHWAEGC*GENTLP
Trigger: AGGAAGTGTGTTCTCTCCCCAACATCCCTCTGCCCA...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTAGTGTAAGTGCAAAGTaGATGAAAATAAGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: THTHTHPETQGYYLTPKISVSAK*MKISSA
Trigger: AGCACTGCTTATTTTCATCCACTTTGCACTTACACT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCCTCTAATTTATTACTaGGAAAGAAGTGCCACAAAG +
Preference number: 2 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAPLIYY*ERSATK
Trigger: CTTTGTGGCACTTCTTTCTCAGTAATAAATTAGAGG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGAGAACTGTGTTTCAATaGCAGAGTTTTACAACCTTC +
Preference number: 2 (lower is better)
Translates to: AKNYFHKNITVSWPFSQARTVFQ*QSFTTF
Trigger: GAAGGTTGTAAAACTCTGTCATTGAAACACAGTTCT...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR GCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACGATGAAAATAAGCAGTaGTCGCTGGACAGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: KPEENIFTFQPRILLNIHDENKQ*SLDSGG
Trigger: GCCACCACTGTCCAGCGAGCACTGCTTATTTTCATC...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAAGATTCACTATCATTTaGCCACATAGCAGATACTTA +
Preference number: 2 (lower is better)
Translates to: KRSICATCLLFLEVEGVARFTII*PHSRYL
Trigger: TAAGTATCTGCTATGTGGCCAAATGATAGTGAATCT...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACATACTCTTCCCCATTTaGTTTCTCAGGAGAAAGGTT +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYILFPI*FLRRKV
Trigger: AACCTTTCTCCTGAGAAATCAAATGGGGAAGAGTAT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR GCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGGCTATTAGAATCCTTTaGTACCTGGGAAGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLAIRIL*YLGSLP
Trigger: AGGCAAACTTCCCAGGTAGCAAAGGATTCTAATAGC...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGGTTGATGCATCTAAATaGGTCCGTTTAAGGCCACAA +
Preference number: 2 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLVDASK*VRLRPQ
Trigger: TTGTGGCCTTAAACGGACCCATTTAGATGCATCAAC...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCCTCTAATTTATTACTaGGAAAGAAGTGCCACAAAG +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYPLIYY*ERSATK
Trigger: CTTTGTGGCACTTCTTTCTCAGTAATAAATTAGAGG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGTTTTACAACCTTCATTaGTCCTTTAGCACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLFYNLH*SFSTSG
Trigger: CCCAGAAGTGCTAAAGGATCAATGAAGGTTGTAAAA...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGTGAAGAGAAGACACTaGAAAATTATCAAGGATCTG +
Preference number: 2 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYVKRRH*KIIKDL
Trigger: CAGATCCTTGATAATTTTTCAGTGTCTTCTCTTCAC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR GCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACGCTATTAGAATCCTTTaGTACCTGGGAAGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: KPEENIFTFQPRILLNIHAIRIL*YLGSLP
Trigger: AGGCAAACTTCCCAGGTAGCAAAGGATTCTAATAGC...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR TCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACATACTCTTCCCCATTTaGTTTCTCAGGAGAAAGGTT +
Preference number: 2 (lower is better)
Translates to: KPEENIFTFQPRILLNIHILFPI*FLRRKV
Trigger: AACCTTTCTCCTGAGAAATCAAATGGGGAAGAGTAT...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 72 bp TTTTGCATTGTCGGTGGCTCTGCCTCACCCCTGTCCTaGCTTCTGTTGCCACCTCCTTTACACACACACACA +
Preference number: 3 (lower is better)
Translates to: FCIVGGSASPLS*LLLPPPLHTHT
Trigger: TGTGTGTGTGTGTAAAGGAGGTGGCAACAGAAGCCAGGACAGGGGTGAGGCAGAGCCACCGACAATGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAAATCTCGACCAGCACTaGGGAAGCAGAGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: KRSICATCLLFLEVEGVANLDQH*GSRGSR
Trigger: CCGACTGCCTCTGCTTCCCAAGTGCTGGTCGAGATT...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTAATCTCGACCAGCACTaGGGAAGCAGAGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: THTHTHPETQGYYLTPKINLDQH*GSRGSR
Trigger: CCGACTGCCTCTGCTTCCCAAGTGCTGGTCGAGATT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 72 bp GATGGGTATATACAGGTCTTCTGGGCAGAGGGATGTTaGGGAGAGAACACACTTCCTGTGTCCATGCCTACA +
Preference number: 3 (lower is better)
Translates to: DGYIQVFWAEGC*GENTLPVSMPT
Trigger: TGTAGGCATGGACACAGGAAGTGTGTTCTCTCCCCAACATCCCTCTGCCCAGAAGACCTGTATATACCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 72 bp GTAAGTGCAAAGTGGATGAAAATAAGCAGTGCTCGCTaGACAGTGGTGGCGCACGACTTTAGTCCCAGCACT +
Preference number: 3 (lower is better)
Translates to: VSAKWMKISSAR*TVVAHDFSPST
Trigger: AGTGCTGGGACTAAAGTCGTGCGCCACCACTGTCCAGCGAGCACTGCTTATTTTCATCCACTTTGCACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 72 bp GGGATGGGGGTGCTGTACAATATGGACCCTAACGTGTaGGGTTGGGTAGTATGTTACAGTGTTATGGCTAGA +
Preference number: 3 (lower is better)
Translates to: GMGVLYNMDPNV*GWVVCYSVMAR
Trigger: TCTAGCCATAACACTGTAACATACTACCCAACCCCACACGTTAGGGTCCATATTGTACAGCACCCCCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACAGGCGGATCTCTAAGTaGGAGGCCAGCCTGGTCTAC +
Preference number: 3 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYRRISK*EASLVY
Trigger: GTAGACCAGGCTGGCCTCCAACTTAGAGATCCGCCT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR TCA 72 bp ATAAGGCAACTGGAAATCAGACATTTGCAGATGAAATaGACTCTGGGCTGGATGCATGTGCAAGGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: IRQLEIRHLQMK*TLGWMHVQGCP
Trigger: GGGGCAGCCTTGCACATGCATCCAGCCCAGAGTTCATTTCATCTGCAAATGTCTGATTTCCAGTTGCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGCAAAGCACTGGGCTATaGCCTGCCACTTCCACACCT +
Preference number: 3 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLQSTGL*PATSTP
Trigger: AGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTG...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 72 bp GTAAAACAGGAACTTGAACCTCAAGAACTCTACAACTaGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTG +
Preference number: 3 (lower is better)
Translates to: VKQELEPQELYN*GWGFSSVVERL
Trigger: CAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCAGTTGTAGAGTTCTTGAGGTTCAAGTTCCTGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACCTGGGCAGAGGGATGTaGGGGAGAGAACACACTTCC +
Preference number: 3 (lower is better)
Translates to: KPEENIFTFQPRILLNIHLGRGM*GREHTS
Trigger: GGAAGTGTGTTCTCTCCCCAACATCCCTCTGCCCAG...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTTTCCAGCCAAGAATCTaGCTAAACATCCACCATTTG +
Preference number: 3 (lower is better)
Translates to: THTHTHPETQGYYLTPKIFQPRI*LNIHHL
Trigger: CAAATGGTGGATGTTTAGCAAGATTCTTGGCTGGAA...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 72 bp CCATTTGATTTCTCAGGAGAAAGGTTCACTCACAGATaGGTATATACAGGTCTTCTGGGCAGAGGGATGTTG +
Preference number: 3 (lower is better)
Translates to: PFDFSGERFTHR*VYTGLLGRGML
Trigger: CAACATCCCTCTGCCCAGAAGACCTGTATATACCCATCTGTGAGTGAACCTTTCTCCTGAGAAATCAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATATACTCTTCCCCATTaGATTTCTCAGGAGAAAGGT +
Preference number: 3 (lower is better)
Translates to: KRSICATCLLFLEVEGVAYTLPH*ISQEKG
Trigger: ACCTTTCTCCTGAGAAATCAAATGGGGAAGAGTATA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR TCA 72 bp CACTTAACATTTCTACAGGCAAAGAACCGACATATGTaGCATTATCAGGCCTTCTCCTGCACCTGGTCACAA +
Preference number: 3 (lower is better)
Translates to: HLTFLQAKNRHM*HYQAFSCTWSQ
Trigger: TTGTGACCAGGTGCAGGAGAAGGCCTGATAATGTCACATATGTCGGTTCTTTGCCTGTAGAAATGTTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR GCA 72 bp ACCAAACCAACTAGTGGTGCTCATGCCTCAAGAAGATaGTCAACAGACATTGTACCATGTGTACCACATCTT +
Preference number: 3 (lower is better)
Translates to: TKPTSGAHASRR*STDIVPCVPHL
Trigger: AAGATGTGGTACACATGGTACAATGTCTGTTGAGCATCTTCTTGAGGCATGAGCACCACTAGTTGGTTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CCA 72 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTaGCCCTTTAGCCAGGCGATGATGACCCATACCTTT +
Preference number: 3 (lower is better)
Translates to: AKNYFHKNITVS*PFSQAMMTHTF
Trigger: AAAGGTATGGGTCATCATCGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGATGCTCAACAGACATaGTACCATGTGTACCACATC +
Preference number: 3 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYDAQQT*YHVYHI
Trigger: GATGTGGTACACATGGTACAATGTCTGTTGAGCATC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCACCACAAGGGTGTAAATaGAGTCAGAATCTTTCTATA +
Preference number: 3 (lower is better)
Translates to: KRSICATCLLFLEVEGVAPQGCK*SQNLSI
Trigger: TATAGAAAGATTCTGACTCAATTTACACCCTTGTGG...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACACAGGTGTTAACGTGTaGAATCCAACTTTATTGGGG +
Preference number: 3 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYTGVNV*NPTLLG
Trigger: CCCCAATAAAGTTGGATTCAACACGTTAACACCTGT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR TCA 72 bp AACTGTGTTTCAATGACAGAGTTTTACAACCTTCATTaGTCCTTTAGCACTTCTGGGCTGGAACTGTACCCT +
Preference number: 3 (lower is better)
Translates to: NCVSMTEFYNLH*SFSTSGLELYP
Trigger: AGGGTACAGTTCCAGCCCAGAAGTGCTAAAGGATCAATGAAGGTTGTAAAACTCTGTCATTGAAACACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACGATGCTCAACAGACATaGTACCATGTGTACCACATC +
Preference number: 3 (lower is better)
Translates to: KPEENIFTFQPRILLNIHDAQQT*YHVYHI
Trigger: GATGTGGTACACATGGTACAATGTCTGTTGAGCATC...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR-3UTR CAA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGTGTTGGAAAGGTCTTTaGTTTTCTGCTGCCTTTACT +
Preference number: 3 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLCWKGL*FSAAFT
Trigger: AGTAAAGGCAGCAGAAAACAAAAGACCTTTCCAACA...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 72 bp AACTGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTaGCCTAGCAAGCGCAAGGCCCTGGGTTCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: NWGWGFSSVVER*PSKRKALGSVL
Trigger: GAGGACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCGTAGCTTCCTCTGCCTaGCCCACCGTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSVASSA*PTVASS
Trigger: AGAGGAAGCCACGGTGGGTCAGGCAGAGGAAGCTAC...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCGTAGCTTCCTCTGCCTaGCCCACTGTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSVASSA*PTVASS
Trigger: AGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTAC...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCTGGGTAGACCCAGCCTaGATTGCCTGGTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSWVDPA*IAWSSG
Trigger: GCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCA...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCTGCCTGACCCACTGTTaGTTCCTCTGCCTGATCCAC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSCLTHC*FLCLIH
Trigger: GTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCA...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCGTAGCTTCTTCTGCCTaGCCCACTGTGGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSVASSA*PTVVSS
Trigger: AGAGGAAACCACAGTGGGTCAGGCAGAAGAAGCTAC...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCGTAGCTTCCTCTGCCTaGCCAACAGTAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSVASSA*PTVASS
Trigger: AGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTAC...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCCTGCCTGATCCACTGTaGCTTTCTCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSLPDPL*LSLCGQ
Trigger: TTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAG...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCGTGGGTTCCTCTGCCTaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSVGSSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCAGGCAGAGGAACCCAC...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAGTCTGCCTGGCCAACTaGAGCTTCCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVAVCLAN*SFLCLA
Trigger: GGCCAGGCAGAGGAAGCTGCAGTTGGCCAGGCAGAC...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCCACTGTGGCTTCCTCTaGCTGACCAACTGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSHCGFL*LTNCGF
Trigger: AAACCCACAGTTGGTCAGGCAGAGGAAGCCACAGTG...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCATAGCTTCCCCTGCCTaGCCAACTGTAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSIASPA*PTVASS
Trigger: AGAAGAAGCTACAGTTGGTCAGGCAGGGGAAGCTAT...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTGTAGCTTCCTCTGCCTaGCCCACCGTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIVASSA*PTVASS
Trigger: AGAGGAAGCCACGGTGGGTCAGGCAGAGGAAGCTAC...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCTCGGGCTGCACCTCTaGCTCAGGCGGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQALGLHL*LRRLLL
Trigger: AAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCCAGTTTCCCTTCCTTTaGCTGACTCTCTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSQFPFL*LTLCLD
Trigger: ATCCAGGCAGAGAGTCAGGCAAAGGAAGGGAAACTG...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCCACTGTAGTTTCCTCTaGCTGGCTCAGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSHCSFL*LAQFPF
Trigger: GAAGGGAAACTGAGCCAGGCAGAGGAAACTACAGTG...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCGATTGCCTGGTCATCTaGCTGGGTCTGGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSDCLVI*LGLGFY
Trigger: ATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATC...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTGCAGCTTCCTCTGCCTaGCCCAGTGCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIAASSA*PSAVSP
Trigger: AGGAGAGACTGCACTGGGCCAGGCAGAGGAAGCTGC...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 72 bp TGCTCAGTAGTCTTCCCTCCTCAAAGCACTGGGCTATaGCCTGCCACTTCCACACCTCCCCATAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: CSVVFPPQSTGL*PATSTPPHKSL
Trigger: AAGTGACTTATGGGGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCCAGTGCAGTCTCTCCTaGTTTCTTTTCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSQCSLS*FLFFSS
Trigger: GCTGCTGAAGAAAAGAAATCAGGAGAGACTGCACTG...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCCAATATAGCTTCCCCTaGCTGACCAACTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSQYSFP*LTNCSF
Trigger: GAAGCTACAGTTGGTCAGGCAGGGGAAGCTATATTG...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCAACTGTAGCTTCCTCTaGCTGACCAACAACTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSNCSFL*LTNNCS
Trigger: GCTACAGTTGTTGGTCAGGCAGAGGAAGCTACAGTT...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCAACTGTAGCTTCCTCTaGCTGACCAACAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSNCSFL*LTNSSF
Trigger: GAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTT...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCACTGCCTGACCCACTGTaGCTTCCTCTGCCTGACCAA +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVALPDPL*LPLPDQ
Trigger: TTGGTCAGGCAGAGGAAGCCACAGTGGGTCAGGCAG...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCCTTTCTTCCTTCTCTTaGAGCAGAGTGTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSLSSFS*SRVWLF
Trigger: AAACAGCCACACTCTGCTTCAAGAGAAGGAAGAAAG...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGTCTGCCTGGCCAACTaGAGCTTCCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYVCLAN*SFLCLA
Trigger: GGCCAGGCAGAGGAAGCTGCAGTTGGCCAGGCAGAC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTAGGACTGGCTGCTACTaGTCCCTTCTCGTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIRTGCY*SLLVLR
Trigger: ACGAAGGACGAGAAGGGACCAGTAGCAGCCAGTCCT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCGTAGCTTCCTTTGCTTaGCTCAATATAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSVASFA*LNIASP
Trigger: AGGGGAAGCTATATTGAGCCAAGCAAAGGAAGCTAC...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCAGCCTGATCCACTGTaGGTTCCTCTGCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIQPDPL*VPLPDP
Trigger: TGGATCAGGCAGAGGAACCCACAGTGGATCAGGCTG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 72 bp AGATGGGTATATACAGGTCTTCTGGGCAGAGGGATGTaGGGGAGAGAACACACTTCCTGTGTCCATGCCTAC +
Preference number: 4 (lower is better)
Translates to: RWVYTGLLGRGM*GREHTSCVHAY
Trigger: GTAGGCATGGACACAGGAAGTGTGTTCTCTCCCCAACATCCCTCTGCCCAGAAGACCTGTATATACCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 72 bp GCGATGATGACCCATACCTTTAATCTCGACCAGCACTaGGGAAGCAGAGGCAGTCGGAATTCTGTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: AMMTHTFNLDQH*GSRGSRNSVSS
Trigger: CGAACTCACAGAATTCCGACTGCCTCTGCTTCCCAAGTGCTGGTCGAGATTAAAGGTATGGGTCATCATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGTCCTGCCTCTCTTTCTaGGGACTGGCTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQASCLSF*GLAATG
Trigger: ACCAGTAGCAGCCAGTCCTCAGAAAGAGAGGCAGGA...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAGTAGCTTCTTCTGCCTaGCCCACTGTGGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVAVASSA*PTVVSS
Trigger: AGAGGAAACCACAGTGGGTCAGGCAGAAGAAGCTAC...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTGTAGCTTCCTCTGCCTaGCCAACAGTAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIVASSA*PTVASS
Trigger: AGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTAC...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCTGCCTGATCCACTGTaGCTTTCTCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKILPDPL*LSLCGQ
Trigger: TTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAGTGGCTTCCTCTGCCTaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVAVASSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCCAC...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGTAGCTTCCTCTGCCTaGCCCACTGTTGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAVASSA*PTVASS
Trigger: AGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTAC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTGTGGGTTCCTCTGCCTaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIVGSSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCAGGCAGAGGAACCCAC...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATTTCTGAGGACTGGCTaGTACTGGTCCCTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVAFLRTG*YWSLLV
Trigger: GACGAGAAGGGACCAGTAGCAGCCAGTCCTCAGAAA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCGGCTTCTGCTTCTTTaGAGGCTCGGACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIRLLLL*RLGPFP
Trigger: AGGAAAAGGTCCGAGCCTGCAAAGAAGCAGAAGCCG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGCTCGGGCTGCACCTCTaGCTCAGGCGGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLLGLHL*LRRLLL
Trigger: AAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAG...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCAACTGTGGGTTTTTCTaGCCAATCAACTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSNCGFF*PINCSF
Trigger: GAAGCTACAGTTGATTGGGCAGAAAAACCCACAGTT...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCTTGGCTCCATTCGTTTaGTTTCTTCTGATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSLAPFV*FLLISV
Trigger: AACCGAGATCAGAAGAAAGCAAACGAATGGAGCCAA...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGTCATCTTTCCCACTTaGGGCACTTTCCCGGATGCC +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAVIFPT*GTFPDA
Trigger: GGCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGAC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCAGCTTCCTCTGCCTaGCCCAGTGCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQAASSA*PSAVSP
Trigger: AGGAGAGACTGCACTGGGCCAGGCAGAGGAAGCTGC...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGCCCTTTTGTCTGCCTaGCCAACTGCAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAALLSA*PTAASS
Trigger: AGAGGAAGCTGCAGTTGGCCAGGCAGACAAAAGGGC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCTGCCTGACCCACTGTaGCTTCCTCTGCATGATCCA +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQALPDPL*LPLHDP
Trigger: TGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGTGGCTTCCTCTGCCTaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAVASSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCCAC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAGTTGCTTCCTCTGCCTaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVAVASSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCAAC...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCACTGCATGATCCACTGTaGCTTTCTCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVALHDPL*LSLCGQ
Trigger: TTGGCCACACAGAGAAAGTCACAGTGGATCATGCAG...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCGGCTTCTGCTTCTTTaGAGGCTCGGACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQARLLLL*RLGPFP
Trigger: AGGAAAAGGTCCGAGCCTGCAAAGAAGCAGAAGCCG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGAACTGCAGCTTCCTCTaGCTGGCCCAGTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQNCSFL*LAQCSL
Trigger: GAGACTGCACTGGGCCAGGCAGAGGAAGCTGCAGTT...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACAACTGCAGCTTCCTCTaGCTGGCCCAGTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYNCSFL*LAQCSL
Trigger: GAGACTGCACTGGGCCAGGCAGAGGAAGCTGCAGTT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCACTTTGCCTGACTCTCTaGCTGGATCACAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVALCLTL*LDHSSF
Trigger: GAAGCTACTGTGATCCAGGCAGAGAGTCAGGCAAAG...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCAGTTTCCCTTCCTTTaGCTGACTCTCTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIQFPFL*LTLCLD
Trigger: ATCCAGGCAGAGAGTCAGGCAAAGGAAGGGAAACTG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCACTGTAGTTTCCTCTaGCTGGCTCAGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIHCSFL*LAQFPF
Trigger: GAAGGGAAACTGAGCCAGGCAGAGGAAACTACAGTG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGAACTGTAGCTTCCTCTaGCTGACCCACTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQANCSFL*LTHCGF
Trigger: GAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTT...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAAACTGTAGCTTCCTCTaGCTGACCCACTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVANCSFL*LTHCCF
Trigger: GAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTT...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTAACTGTAGCTTCCTCTaGCTGACCCACTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKINCSFL*LTHCCF
Trigger: GAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATCTGTGAGTTTGGAATaGCGACTTCTCTTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVASVSLE*RLLFAP
Trigger: AGGGGCAAAGAGAAGTCGTCATTCCAAACTCACAGA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGTGGTTTCCTCTGCCTaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAVVSSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCAGGCAGAGGAAACCAC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGGTAGCTTCCTCTGCCTaGCCCACTGTGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLVASSA*PTVASS
Trigger: AGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTAC...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGTAGCTTCCTCTGCCTaGCCCACTGTTGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQVASSA*PTVASS
Trigger: AGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTAC...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCTGCATGATCCACTGTaGCTTTCTCTGCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQALHDPL*LSLPVQ
Trigger: TTGGACAGGCAGAGAAAGTCACAGTGGATCATGCAG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTCACTGACCGAGGGCTaGCTGCTGCTGAACTCTCAA +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYSLTEG*LLLNSQ
Trigger: TTGAGAGTTCAGCAGCAGGCAGCCCTCGGTCAGTGA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTAACTGTAGCTTCCTCTaGCTGACCAACAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKINCSFL*LTNSSF
Trigger: GAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTGCCTGACCCACTGTTaGTTCCTCTGCCTGATCCAC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYCLTHC*FLCLIH
Trigger: GTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACAGGACTGGCTGCTACTaGTCCCTTCTCGTCCTTCGT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYRTGCY*SLLVLR
Trigger: ACGAAGGACGAGAAGGGACCAGTAGCAGCCAGTCCT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATCCTGGAACCGGCTTTaGGTTTTGTCTTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVASWNRL*VLSCSL
Trigger: AAGCGAACAAGACAAAACCCAAAGCCGGTTCCAGGA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTTCATCTGGCTGGGTCTaGGCTTTTATCTCCAAATCG +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKISSGWV*AFISKS
Trigger: CGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGA...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGTCATCTTTCCCACTTaGGGCACTTTCCCGGATGCC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYVIFPT*GTFPDA
Trigger: GGCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGAC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGCCCTTTTGTCTGCCTaGCCAACTGCAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYALLSA*PTAASS
Trigger: AGAGGAAGCTGCAGTTGGCCAGGCAGACAAAAGGGC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGCTGCCTGACCCACTGTaGTTTCCTCTGCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQLPDPL*FPLPDP
Trigger: TGGATCAGGCAGAGGAAACCACAGTGGGTCAGGCAG...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCTGCCTGACCCACTGTaGTTTCCTCTGCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYLPDPL*FPLPDP
Trigger: TGGATCAGGCAGAGGAAACCACAGTGGGTCAGGCAG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAGTGACTTTCTCTGTGTaGCCAACTGTAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVAVTFSV*PTVASS
Trigger: AGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCAC...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGCTGCCTGACCCACTGTaGCTTCCTCTGCCTGACCAA +
Preference number: 4 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLLPDPL*LPLPDQ
Trigger: TTGGTCAGGCAGAGGAAGCCACAGTGGGTCAGGCAG...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAAGCCTGAATCTTCTGTaGGTTTGGAATGACGACTTC +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVASLNLL*VWNDDF
Trigger: GAAGTCGTCATTCCAAACTCACAGAAGATTCAGGCT...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCATTCTCTCCCGAGGTaGCGCTGTTGCTTATGTGTG +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYHSLPR*RCCLCV
Trigger: CACACATAAGCAACAGCGTCACCTCGGGAGAGAATG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGCATTCTCTCCCGAGGTaGCGCTGTTGCTTATGTGTG +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQHSLPR*RCCLCV
Trigger: CACACATAAGCAACAGCGTCACCTCGGGAGAGAATG...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGTTTCTGAGGACTGGCTaGTACTGGTCCCTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQFLRTG*YWSLLV
Trigger: GACGAGAAGGGACCAGTAGCAGCCAGTCCTCAGAAA...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACGCCTCAGGCGGCTTCTaGTTCTTTGCAGGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHASGGF*FFAGSD
Trigger: GTCCGAGCCTGCAAAGAAGCAGAAGCCGCCTGAGGC...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTCAATACAGTTTCCTTTaGCTGGGCCACTGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIQYSFL*LGHCSF
Trigger: GAAACTACAGTGGCCCAGGCAAAGGAAACTGTATTG...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTAACTGTAGCTTTCTTTaGCTGGCTCAGTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKINCSFL*LAQFTF
Trigger: GAAGGTGAACTGAGCCAGGCAAAGAAAGCTACAGTT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGTCATCTGGCTGGGTCTaGGCTTTTATCTCCAAATCG +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQASSGWV*AFISKS
Trigger: CGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGA...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGACAGTTTCCTTTGCCTaGGCCACTGTAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQATVSFA*ATVVSS
Trigger: AGAGGAAACTACAGTGGCCCAGGCAAAGGAAACTGT...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTGTAGCTTTCTTTGCCTaGCTCAGTTCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKIVAFFA*LSSPSF
Trigger: AAAGGAAGGTGAACTGAGCCAGGCAAAGAAAGCTAC...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGTAGCTTCCTCTGCCTaGCCAACTGTAGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAVASSA*PTVAFF
Trigger: AAAGAAAGCTACAGTTGGCCAGGCAGAGGAAGCTAC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGTGACTTTCTCTGTGTaGCCAACTGTAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAVTFSV*PTVASS
Trigger: AGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCAC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCAATGATAATAGCAATTaGCTCCATTCGTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSNDNSN*LHSFAF
Trigger: GAAAGCAAACGAATGGAGCCAATTGCTATTATCATT...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGCTGTTGCTTATGTGTaGTTCTTGGCTCTTCTTACC +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAAVAYV*FLALLT
Trigger: GGTAAGAAGAGCCAAGAATCACACATAAGCAACAGC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGATGTGTGGTTGCTGGTaGTGGAGGAGCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLMCGCW*WRSSRS
Trigger: ACTTCTGCTGCTCCTCCATCACCAGCAACCACACAT...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACATAGCTTCCCCTGCCTaGCCAACTGTAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYIASPA*PTVASS
Trigger: AGAAGAAGCTACAGTTGGTCAGGCAGGGGAAGCTAT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACGTTGCTTCCTCTGCCTaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYVASSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCAAC...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGCTGCATGATCCACTGTaGCTTTCTCTGTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQLHDPL*LSLCGQ
Trigger: TTGGCCACACAGAGAAAGTCACAGTGGATCATGCAG...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGTGGCTTCCTCTGCATaGTCCACTGTGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQVASSA*STVTFS
Trigger: AGAGAAAGTCACAGTGGATCATGCAGAGGAAGCCAC...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCACAGTTCACCTTCCTTTaGCTGACTCAATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVAQFTFL*LTQYSF
Trigger: GAAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTG...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGAACTGTAGCTTTCTTTaGCTGGCTCAGTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQANCSFL*LAQFTF
Trigger: GAAGGTGAACTGAGCCAGGCAAAGAAAGCTACAGTT...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGAACTGTAGCTTCCTCTaGCTGACCCACTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLNCSFL*LTHCGF
Trigger: GAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTT...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTCTCTTTCTGAGGACTaGCTGCTACTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYSLSED*LLLVPS
Trigger: AGAAGGGACCAGTAGCAGCCAGTCCTCAGAAAGAGA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACTGGGTAGACCCAGCCTaGATTGCCTGGTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHWVDPA*IAWSSG
Trigger: GCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCA...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGTAGCTTCCTTTGCTTaGCTCAATATAGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAVASFA*LNIASP
Trigger: AGGGGAAGCTATATTGAGCCAAGCAAAGGAAGCTAC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACTCCTGCCTCTCTTTCTaGGGACTGGCTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHSCLSF*GLAATG
Trigger: ACCAGTAGCAGCCAGTCCTCAGAAAGAGAGGCAGGA...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCAGTGCAGTCTCTCCTaGTTTCTTTTCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYQCSLS*FLFFSS
Trigger: GCTGCTGAAGAAAAGAAATCAGGAGAGACTGCACTG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGTCGTTTGCTTTCTTCTaGTCTCGGTTTCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: AKNYFHKNITVSWPFSQASFAFF*SRFLCI
Trigger: GATACAGAGAAACCGAGATCAGAAGAAAGCAAACGA...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACTCACTGACCGAGGGCTaGCTGCTGCTGAACTCTCAA +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHSLTEG*LLLNSQ
Trigger: TTGAGAGTTCAGCAGCAGGCAGCCCTCGGTCAGTGA...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCAATATAGCTTCCCCTaGCTGACCAACTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYQYSFP*LTNCSF
Trigger: GAAGCTACAGTTGGTCAGGCAGGGGAAGCTATATTG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTAACTGTAGCTTCCTTTaGTTGGCTCAATATAGCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHPETQGYYLTPKINCSFL*LAQYSF
Trigger: GAAGCTATATTGAGCCAAGCAAAGGAAGCTACAGTT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAAACTGTAGCTTCCTTTaGTTGGCTCAATATAGCTTC +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVANCSFL*LAQYSF
Trigger: GAAGCTATATTGAGCCAAGCAAAGGAAGCTACAGTT...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTCCTGGAACCGGCTTTaGGTTTTGTCTTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYSWNRL*VLSCSL
Trigger: AAGCGAACAAGACAAAACCCAAAGCCGGTTCCAGGA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGGATTGCCTGGTCATCTaGCTGGGTCTGGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLDCLVI*LGLGFY
Trigger: ATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATC...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATCAGGAGTTCCCATCTaGATAGCAGAAGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: KRSICATCLLFLEVEGVASGVPI*IAEDLF
Trigger: AAACAAATCTTCTGCTATCCAGATGGGAACTCCTGA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACACAGTTTCCTTTGCCTaGGCCACTGTAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYTVSFA*ATVVSS
Trigger: AGAGGAAACTACAGTGGCCCAGGCAAAGGAAACTGT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACCTGCCTGACCCACTGTaGCTTCCTCTGCATGATCCA +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHLPDPL*LPLHDP
Trigger: TGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAG...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCTGTTGCTTATGTGTaGTTCTTGGCTCTTCTTACC +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQAVAYV*FLALLT
Trigger: GGTAAGAAGAGCCAAGAATCACACATAAGCAACAGC...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACCACTGTGGCTTCCTCTaGCTGACCAACTGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHHCGFL*LTNCGF
Trigger: AAACCCACAGTTGGTCAGGCAGAGGAAGCCACAGTG...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACCTGCATGATCCACTGTaGCTTTCTCTGCCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHLHDPL*LSLPVQ
Trigger: TTGGACAGGCAGAGAAAGTCACAGTGGATCATGCAG...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTCGTTTGCTTTCTTCTaGTCTCGGTTTCTCTGTATC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYSFAFF*SRFLCI
Trigger: GATACAGAGAAACCGAGATCAGAAGAAAGCAAACGA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCAGTTCACCTTCCTTTaGCTGACTCAATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYQFTFL*LTQYSF
Trigger: GAAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTTGGCTCCATTCGTTTaGTTTCTTCTGATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYLAPFV*FLLISV
Trigger: AACCGAGATCAGAAGAAAGCAAACGAATGGAGCCAA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGTCAGGAGTTCCCATCTaGATAGCAGAAGATTTGTTT +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQSGVPI*IAEDLF
Trigger: AAACAAATCTTCTGCTATCCAGATGGGAACTCCTGA...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACGTAGCTTCCTCTGCCTaGCCAACTGTAGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHVASSA*PTVAFF
Trigger: AAAGAAAGCTACAGTTGGCCAGGCAGAGGAAGCTAC...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACCTTTCTTCCTTCTCTTaGAGCAGAGTGTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHLSSFS*SRVWLF
Trigger: AAACAGCCACACTCTGCTTCAAGAGAAGGAAGAAAG...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR TCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACAGCCTGAATCTTCTGTaGGTTTGGAATGACGACTTC +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHSLNLL*VWNDDF
Trigger: GAAGTCGTCATTCCAAACTCACAGAAGATTCAGGCT...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR GCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACCAATACAGTTTCCTTTaGCTGGGCCACTGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHQYSFL*LGHCSF
Trigger: GAAACTACAGTGGCCCAGGCAAAGGAAACTGTATTG...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACGTAGCTTTCTTTGCCTaGCTCAGTTCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KPEENIFTFQPRILLNIHVAFFA*LSSPSF
Trigger: AAAGGAAGGTGAACTGAGCCAGGCAAAGAAAGCTAC...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CCA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGAATGATAATAGCAATTaGCTCCATTCGTTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQNDNSN*LHSFAF
Trigger: GAAAGCAAACGAATGGAGCCAATTGCTATTATCATT...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
3UTR CAA 72 bp ACATTCCAGCCAAGAATCTTGCTAAACATCCACCATTaGGTTAATTTTCAAAGCCACATTAGTTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: TFQPRILLNIHH*VNFQSHISYFC
Trigger: GCAAAAGTAACTAATGTGGCTTTGAAAATTAACCAAATGGTGGATGTTTAGCAAGATTCTTGGCTGGAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS TCA 90 bp GCTTCTTTGCAGGCTCGGACCTTTTCCTGTGTGTCACAAGGCCTTTaGTGGAGGCCCAGGCACCCGCTGGTTGCCGTTGACCAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ASLQARTFSCVSQGL*WRPRHPLVAVDQSP
Trigger: GGGGCTCTGGTCAACGGCAACCAGCGGGTGCCTGGGCCTCCATCAAAGGCCTTGTGACACACAGGAAAAGGTCCGAGCCTGCAAAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp GGAAGAGCCCCATCCTCGGGCTGCACCTCTGCCTCAGGCGGCTTCTaGTTCTTTGCAGGCTCGGACCTTTTCCTGTGTGTCACAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GRAPSSGCTSASGGF*FFAGSDLFLCVTRP
Trigger: AGGCCTTGTGACACACAGGAAAAGGTCCGAGCCTGCAAAGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAGGATGGGGCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CCCATCCTCGGGCTGCACCTCTGCCTCAGGCGGCTTCTGCTTCTTTaGAGGCTCGGACCTTTTCCTGTGTGTCACAAGGCCTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: PILGLHLCLRRLLLL*RLGPFPVCHKAFDG
Trigger: TCCATCAAAGGCCTTGTGACACACAGGAAAAGGTCCGAGCCTGCAAAGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAGGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp TTTCCTGTGTGTCACAAGGCCTTTGATGGAGGCCCAGGCACCCGCTaGTTGCCGTTGACCAGAGCCCCCAGCTTCGGGGGTATGTTTCTT +
Preference number: 5 (lower is better)
Translates to: FPVCHKAFDGGPGTR*LPLTRAPSFGGMFL
Trigger: AAGAAACATACCCCCGAAGCTGGGGGCTCTGGTCAACGGCAACCAGCGGGTGCCTGGGCCTCCATCAAAGGCCTTGTGACACACAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp CCCTGGGTAGACCCAGCCTGGATTGCCTGGTCATCTGGCTGGGTCTaGGCTTTTATCTCCAAATCGTCTGCCTCTCCCTGGACTCTGACG +
Preference number: 5 (lower is better)
Translates to: PWVDPAWIAWSSGWV*AFISKSSASPWTLT
Trigger: CGTCAGAGTCCAGGGAGAGGCAGACGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp ATCACAGTAGCTTCCTCTGGGTGGCCCGCTGTAGCTTCTCCGGCCTaGCTTAGTGCCCTTTTGTCTGCCTGGCCAACTGCAGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ITVASSGWPAVASPA*LSALLSAWPTAASS
Trigger: AGAGGAAGCTGCAGTTGGCCAGGCAGACAAAAGGGCACTAAGCCAGGCCGGAGAAGCTACAGCGGGCCACCCAGAGGAAGCTACTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp TGTAGGCCCTGGGTAGACCCAGCCTGGATTGCCTGGTCATCTGGCTaGGTCTGGGCTTTTATCTCCAAATCGTCTGCCTCTCCCTGGACT +
Preference number: 5 (lower is better)
Translates to: CRPWVDPAWIAWSSG*VWAFISKSSASPWT
Trigger: AGTCCAGGGAGAGGCAGACGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGGCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp TGGCTCTTCTTACCATCTCTCACCAACACACCTTCCTGTAGGCCCTaGGTAGACCCAGCCTGGATTGCCTGGTCATCTGGCTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: WLFLPSLTNTPSCRP*VDPAWIAWSSGWVW
Trigger: CCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGGCCTACAGGAAGGTGTGTTGGTGAGAGATGGTAAGAAGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp AACACACCTTCCTGTAGGCCCTGGGTAGACCCAGCCTGGATTGCCTaGTCATCTGGCTGGGTCTGGGCTTTTATCTCCAAATCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: NTPSCRPWVDPAWIA*SSGWVWAFISKSSA
Trigger: GGCAGACGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGGCCTACAGGAAGGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCCAGGCACCCGCTGGTaGCCGTTGACCAGAGCCCCC +
Preference number: 5 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAPGTRW*PLTRAP
Trigger: GGGGGCTCTGGTCAACGGCAACCAGCGGGTGCCTGG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS GCA 90 bp CTGACCAACAGTAGCTTCCTCTGCCTGACCCACCGTGGCTTCCTCTaGCTGATCCACTGTGACTTTCTCTGTGTGGCCAACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LTNSSFLCLTHRGFL*LIHCDFLCVANCSF
Trigger: GAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCCACGGTGGGTCAGGCAGAGGAAGCTACTGTTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGACCCACTGTGGCTTCCTCTGCATGATCCACTGTGACTTTCTCTaGCTGTCCAACTGTAGCTTCCTCTGCCTGACCCACTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LTHCGFLCMIHCDFL*LSNCSFLCLTHCGF
Trigger: GAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACAGGCAGAGAAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGATCCACTGTGGGTTCCTCTGCCTGATCCACTGTGACTTTCTCTaGCTGTCCAACTGTAGCTTCCTCTGCCTGACCCACTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LIHCGFLCLIHCDFL*LSNCSFLCLTHCGF
Trigger: GAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACAGGCAGAGAAAGTCACAGTGGATCAGGCAGAGGAACCCACAGTGGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp TCTCTCACCAACACACCTTCCTGTAGGCCCTGGGTAGACCCAGCCTaGATTGCCTGGTCATCTGGCTGGGTCTGGGCTTTTATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SLTNTPSCRPWVDPA*IAWSSGWVWAFISK
Trigger: TTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGGCCTACAGGAAGGTGTGTTGGTGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCAACCCGCTGGTTGCCGTaGACCAGAGCCCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KRSICATCLLFLEVEGVATRWLP*TRAPSF
Trigger: GAAGCTGGGGGCTCTGGTCAACGGCAACCAGCGGGT...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTACCCGCTGGTTGCCGTaGACCAGAGCCCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: THTHTHPETQGYYLTPKITRWLP*TRAPSF
Trigger: GAAGCTGGGGGCTCTGGTCAACGGCAACCAGCGGGT...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCTGGCTTAGTGCCCTTTaGTCTGCCTGGCCAACTGCA +
Preference number: 5 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSWLSAL*SAWPTA
Trigger: TGCAGTTGGCCAGGCAGACAAAAGGGCACTAAGCCA...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS GCA 90 bp CTGACCAACTGTGGGTTTTTCTGCCCAATCAACTGTAGCTTCCTCTaGCTGACCAACAGTAGCTTCCTCTGCCTGACCCACCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: LTNCGFFCPINCSFL*LTNSSFLCLTHRGF
Trigger: GAAGCCACGGTGGGTCAGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGATTGGGCAGAAAAACCCACAGTTGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp GTGGCCAACTGTAGCTTCCTCTGCCTGACCCACTGTGGCTTCCTCTaGCTGACCAACTGTGGGTTTTTCTGCCCAATCAACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: VANCSFLCLTHCGFL*LTNCGFFCPINCSF
Trigger: GAAGCTACAGTTGATTGGGCAGAAAAACCCACAGTTGGTCAGGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGATCCACTGTGACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTaGCTGACCCACTGTGGCTTCCTCTGCCTGACCAACTGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LIHCDFLCVANCSFL*LTHCGFLCLTNCGF
Trigger: AAACCCACAGTTGGTCAGGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp GTGGCCAACTGTAGCTTCCTCTGCCTGACCCACTGTTGCTTCCTCTaGCTGATCCACTGTGACTTTCTCTGTGTGGCCAACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: VANCSFLCLTHCCFL*LIHCDFLCVANCSF
Trigger: GAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGCCAGGCACCCGCTGGTaGCCGTTGACCAGAGCCCCC +
Preference number: 5 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQPGTRW*PLTRAP
Trigger: GGGGGCTCTGGTCAACGGCAACCAGCGGGTGCCTGG...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS GCA 90 bp CTGACCCACTGTGGCTTCCTCTGCCTGACCAACTGTGGGTTTTTCTaGCCAATCAACTGTAGCTTCCTCTGCCTGACCAACAGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LTHCGFLCLTNCGFF*PINCSFLCLTNSSF
Trigger: GAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGATTGGGCAGAAAAACCCACAGTTGGTCAGGCAGAGGAAGCCACAGTGGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp TTTCTCTGTGTGGCCAACTGTAGCTTCCTCTGCCTGACCCACTGTTaGTTCCTCTGCCTGATCCACTGTGACTTTCTCTGTGTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FLCVANCSFLCLTHC*FLCLIHCDFLCVAN
Trigger: GTTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGTCCAACTGTAGCTTCCTCTGCCTGACCCACTGTGGCTTCCTCTaGATGATCCACTGTGACTTTCTCTGTGTGGCCAACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSNCSFLCLTHCGFL*MIHCDFLCVANCSF
Trigger: GAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCTATGTTGATGTGTGGTaGCTGGTGATGGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSYVDVW*LVMEEQ
Trigger: CTGCTCCTCCATCACCAGCAACCACACATCAACATA...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS TCA 90 bp TCCACTGTGACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTGCCTaGCCAACAGTAGCTTCCTCTGCCCGATCAACTGTAGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: STVTFSVWPTVASSA*PTVASSARSTVASS
Trigger: AGAGGAAGCTACAGTTGATCGGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGGCTCAGTTCACCTTCCTTTGCCTGACTCAATACAGTTTCCTTTaGCTGGGCCACTGTAGTTTCCTCTGCCTGGCTCAGTTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LAQFTFLCLTQYSFL*LGHCSFLCLAQFPF
Trigger: GAAGGGAAACTGAGCCAGGCAGAGGAAACTACAGTGGCCCAGGCAAAGGAAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGATCCACTGTGACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTaGCTGACCAACAGTAGCTTCCTCTGCCCGATCAACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LIHCDFLCVANCSFL*LTNSSFLCPINCSF
Trigger: GAAGCTACAGTTGATCGGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGATCCACTGTGACTTTCTCTGCCTGTCCAACTGTAGCTTCCTCTaGCTGACCCACTGTGGCTTCCTCTGCATGATCCACTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: LIHCDFLCLSNCSFL*LTHCGFLCMIHCDF
Trigger: AAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACAGGCAGAGAAAGTCACAGTGGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp ATGATCCACTGTGACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTaGCTGACCCACTGTTGCTTCCTCTGCCTGATCCACTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: MIHCDFLCVANCSFL*LTHCCFLCLIHCDF
Trigger: AAAGTCACAGTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACAGTGGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp ATGATCCACTGTGACTTTCTCTGCCTGTCCAACTGTAGCTTCCTCTaGCTGACCCACTGTGGCTTCCTCTGCATGATCCACTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: MIHCDFLCLSNCSFL*LTHCGFLCMIHCDF
Trigger: AAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGACAGGCAGAGAAAGTCACAGTGGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCTGCCTGACCCACTGTaGCTTCCTCTGCCTGATCCA +
Preference number: 5 (lower is better)
Translates to: AKNYFHKNITVSWPFSQALPDPL*LPLPDP
Trigger: TGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS GCA 90 bp CAGTCTTTCTCCTGTCATCTTTCCCACTTGGGGCACTTTCCCGGATaGCATTACTGGGTTCTTCCAGACTATGTTGATGTGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: QSFSCHLSHLGHFPG*HYWVLPDYVDVWLL
Trigger: CAGCAACCACACATCAACATAGTCTGGAAGAACCCAGTAATGGCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGACAGGAGAAAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGACCAACTGTAGCTTCTTCTGCCTGACCCACTGTGGTTTCCTCTaGCTGATCCACTGTGACTTTCTCTGTGTGGTCAATTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LTNCSFFCLTHCGFL*LIHCDFLCVVNCSF
Trigger: GAAGCTACAATTGACCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAACCACAGTGGGTCAGGCAGAAGAAGCTACAGTTGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 90 bp CTGACCAACAGTAGCTTCCTCTGCCCGATCAACTGTAGCTTCCTCTaGCTGACCAACAACTGTAGCTTCCTTTGCTTGGCTCAATATAGC +
Preference number: 5 (lower is better)
Translates to: LTNSSFLCPINCSFL*LTNNCSFLCLAQYS
Trigger: GCTATATTGAGCCAAGCAAAGGAAGCTACAGTTGTTGGTCAGGCAGAGGAAGCTACAGTTGATCGGGCAGAGGAAGCTACTGTTGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp ATCACATTCTCTCCCGAGGTGACGCTGTTGCTTATGTGTGATTCTTaGCTCTTCTTACCATCTCTCACCAACACACCTTCCTGTAGGCCC +
Preference number: 5 (lower is better)
Translates to: ITFSPEVTLLLMCDS*LFLPSLTNTPSCRP
Trigger: GGGCCTACAGGAAGGTGTGTTGGTGAGAGATGGTAAGAAGAGCCAAGAATCACACATAAGCAACAGCGTCACCTCGGGAGAGAATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGCGGGGGTATGTTTCTTaGTCTCCTCAGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AKNYFHKNITVSWPFSQARGYVS*SPQQSW
Trigger: CCAGGACTGCTGAGGAGACAAAGAAACATACCCCCG...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp AGTAGTCTTCCCTCCTCAAAGCACTGGGCTATTGCCTGCCACTTCCACACCTCCAATGACGACTTCTCTTaGCCCCTCTTGAGAATCTTA +
Preference number: 5 (lower is better)
Translates to: SSLPSSKHWAIACHFHTSNDDFS*PLLRIL
Trigger: TAAGATTCTCAAGAGGGGCAAAGAGAAGTCGTCATT...GGAGGTGTGGAAGTGGCAGGCAATAGCCCAGTGCTTTGAGGAGGGAAGACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGTGTCATCTTTCCCACTaGGGGCACTTTCCCGGATGC +
Preference number: 5 (lower is better)
Translates to: AKNYFHKNITVSWPFSQACHLSH*GHFPGC
Trigger: GCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGACA...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS GCA 90 bp GTGGTCAATTGTAGCTTCCTCTGCCTGGCCAACTGTAGCTTTCTTTaGCTGGCTCAGTTCACCTTCCTTTGCCTGACTCAATACAGTTTC +
Preference number: 5 (lower is better)
Translates to: VVNCSFLCLANCSFL*LAQFTFLCLTQYSF
Trigger: GAAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTGAGCCAGGCAAAGAAAGCTACAGTTGGCCAGGCAGAGGAAGCTACAATTGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATATGTTGATGTGTGGTaGCTGGTGATGGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: KRSICATCLLFLEVEGVAYVDVW*LVMEEQ
Trigger: CTGCTCCTCCATCACCAGCAACCACACATCAACATA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACCTGCCTGACCCACTGTaGCTTCCTCTGCCTGATCCA +
Preference number: 5 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYLPDPL*LPLPDP
Trigger: TGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAG...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS TCA 90 bp TTTTATCTCCAAATCGTCTGCCTCTCCCTGGACTCTGACGTAGCCTaGATCTTCTGTGAGTTTGGAATGACGACTTCTCTTTGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: FYLQIVCLSLDSDVA*IFCEFGMTTSLCPS
Trigger: AGAGGGGCAAAGAGAAGTCGTCATTCCAAACTCACAGAAGATTCAGGCTACGTCAGAGTCCAGGGAGAGGCAGACGATTTGGAGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 90 bp TTTCTTTTCTTCAGCAGCAGTCTTTCTCCTGTCATCTTTCCCACTTaGGGCACTTTCCCGGATGCCATTACTGGGTTCTTCCAGACTATG +
Preference number: 5 (lower is better)
Translates to: FLFFSSSLSPVIFPT*GTFPDAITGFFQTM
Trigger: CATAGTCTGGAAGAACCCAGTAATGGCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGACAGGAGAAAGACTGCTGCTGAAGAAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATGTAGCTTCCTTTGCTaGGCTCAATATAGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: KRSICATCLLFLEVEGVACSFLC*AQYSFP
Trigger: GGGGAAGCTATATTGAGCCAAGCAAAGGAAGCTACA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp GCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGGCGGCTTTCTTCCTTCTCTaGAAGCAGAGTGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: AKNYFHKNITVSWPFSQAAFFLL*KQSVAV
Trigger: AACAGCCACACTCTGCTTCAAGAGAAGGAAGAAAGC...CGCCTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp AAGAGATCCATTTGTGCCACATGCTTATTATTCTTGGAGGTGGAGGGGGTGGCATTCTCTTTGCCCCTCTaGAGAATCTTAGGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: KRSICATCLLFLEVEGVAFSLPL*RILGKE
Trigger: TTCCTTGCCTAAGATTCTCAAGAGGGGCAAAGAGAA...TGCCACCCCCTCCACCTCCAAGAATAATAAGCATGTGGCACAAATGGATCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp ACACACACACACACACACCCTGAAACCCAGGGCTACTATCTTACCCCCAAAATTTTCTCTTTGCCCCTCTaGAGAATCTTAGGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: THTHTHPETQGYYLTPKIFSLPL*RILGKE
Trigger: TTCCTTGCCTAAGATTCTCAAGAGGGGCAAAGAGAA...AATTTTGGGGGTAAGATAGTAGCCCTGGGTTTCAGGGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS CCA 90 bp TCCGTGATCACCTTAGTCTCCTTTTCCAGCTCAGGAGTTCCCATCTaGATAGCAGAAGATTTGTTTTCTAATTCCAGTTCTATGGCGATC +
Preference number: 5 (lower is better)
Translates to: SVITLVSFSSSGVPI*IAEDLFSNSSSMAI
Trigger: GATCGCCATAGAACTGGAATTAGAAAACAAATCTTCTGCTATCCAGATGGGAACTCCTGAGCTGGAAAAGGAGACTAAGGTGATCACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS-3UTR CAA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGAACCGGCTTTGGGTTTaGTCTTGTTCGCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQNRLWV*SCSLSS
Trigger: GGAAGAAAGCGAACAAGACAAAACCCAAAGCCGGTT...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACAACCGGCTTTGGGTTTaGTCTTGTTCGCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYNRLWV*SCSLSS
Trigger: GGAAGAAAGCGAACAAGACAAAACCCAAAGCCGGTT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp AAGCCTGAAGAAAATATTTTCACATTCCAGCCAAGAATCTTGCTAAACATCCACTGGCTTAGTGCCCTTTaGTCTGCCTGGCCAACTGCA +
Preference number: 5 (lower is better)
Translates to: KPEENIFTFQPRILLNIHWLSAL*SAWPTA
Trigger: TGCAGTTGGCCAGGCAGACAAAAGGGCACTAAGCCA...GTGGATGTTTAGCAAGATTCTTGGCTGGAATGTGAAAATATTTTCTTCAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGTGTAGCTTCCTTTGCTaGGCTCAATATAGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQCSFLC*AQYSFP
Trigger: GGGGAAGCTATATTGAGCCAAGCAAAGGAAGCTACA...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp TCTAAGACTCCACTAAGTAGTAGACCAATTAAGATCATCCCCATCTTCATGCTGGCTTTCTTCCTTCTCTaGAAGCAGAGTGTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SKTPLSSRPIKIIPIFMLAFFLL*KQSVAV
Trigger: AACAGCCACACTCTGCTTCAAGAGAAGGAAGAAAGC...CAGCATGAAGATGGGGATGATCTTAATTGGTCTACTACTTAGTGGAGTCTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACATTGGCTCCATTCGTTaGCTTTCTTCTGATCTCGGT +
Preference number: 5 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYIGSIR*LSSDLG
Trigger: ACCGAGATCAGAAGAAAGCAAACGAATGGAGCCAAT...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGAATGACGACTTCTCTTaGCCCCTCTTGAGAATCTTA +
Preference number: 5 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQNDDFS*PLLRIL
Trigger: TAAGATTCTCAAGAGGGGCAAAGAGAAGTCGTCATT...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp ATCAGAGGAGATATACGGTTTATGTTCAGACCCCAACTTCTCCATCCTTTCTACTCAGTTCACCTTCCTTaGCCTGACTCAATACAGTTT +
Preference number: 5 (lower is better)
Translates to: IRGDIRFMFRPQLLHPFYSVHLP*PDSIQF
Trigger: AAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTGA...GTAGAAAGGATGGAGAAGTTGGGGTCTGAACATAAACCGTATATCTCCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS-3UTR CAA 90 bp TTGGCCAAGAACTATTTTCACAAGAATATTACGGTTTCCTGGCCCTTTAGCCAGTCAGTTCACCTTCCTTaGCCTGACTCAATACAGTTT +
Preference number: 5 (lower is better)
Translates to: LAKNYFHKNITVSWPFSQSVHLP*PDSIQF
Trigger: AAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTGA...CTGGCTAAAGGGCCAGGAAACCGTAATATTCTTGTGAAAATAGTTCTTGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
CDS CAA 72 bp CACAAGGCCTTTGATGGAGGCCCAGGCACCCGCTGGTaGCCGTTGACCAGAGCCCCCAGCTTCGGGGGTATG +
Preference number: 6 (lower is better)
Translates to: HKAFDGGPGTRW*PLTRAPSFGGM
Trigger: CATACCCCCGAAGCTGGGGGCTCTGGTCAACGGCAACCAGCGGGTGCCTGGGCCTCCATCAAAGGCCTTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 90 bp TCTGGGTGGCCCGCTGTAGCTTCTCCGGCCTGGCTTAGTGCCCTTTaGTCTGCCTGGCCAACTGCAGCTTCCTCTGCCTGGCCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: SGWPAVASPAWLSAL*SAWPTAASSAWPSA
Trigger: TGCACTGGGCCAGGCAGAGGAAGCTGCAGTTGGCCAGGCAGACAAAAGGGCACTAAGCCAGGCCGGAGAAGCTACAGCGGGCCACCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp GCTTCCTCTGGGTGGCCCGCTGTAGCTTCTCCGGCCTaGCTTAGTGCCCTTTTGTCTGCCTGGCCAACTGCA +
Preference number: 6 (lower is better)
Translates to: ASSGWPAVASPA*LSALLSAWPTA
Trigger: TGCAGTTGGCCAGGCAGACAAAAGGGCACTAAGCCAGGCCGGAGAAGCTACAGCGGGCCACCCAGAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS TCA 72 bp CAGGCTCGGACCTTTTCCTGTGTGTCACAAGGCCTTTaGTGGAGGCCCAGGCACCCGCTGGTTGCCGTTGAC +
Preference number: 6 (lower is better)
Translates to: QARTFSCVSQGL*WRPRHPLVAVD
Trigger: GTCAACGGCAACCAGCGGGTGCCTGGGCCTCCATCAAAGGCCTTGTGACACACAGGAAAAGGTCCGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp GGGCTGCACCTCTGCCTCAGGCGGCTTCTGCTTCTTTaGAGGCTCGGACCTTTTCCTGTGTGTCACAAGGCC +
Preference number: 6 (lower is better)
Translates to: GLHLCLRRLLLL*RLGPFPVCHKA
Trigger: GGCCTTGTGACACACAGGAAAAGGTCCGAGCCTGCAAAGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp CCATCCTCGGGCTGCACCTCTGCCTCAGGCGGCTTCTaGTTCTTTGCAGGCTCGGACCTTTTCCTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: PSSGCTSASGGF*FFAGSDLFLCV
Trigger: GACACACAGGAAAAGGTCCGAGCCTGCAAAGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 72 bp CGGGCTGCACCTCTGCCTCAGGCGGCTTCTGCTTCTTaGCAGGCTCGGACCTTTTCCTGTGTGTCACAAGGC +
Preference number: 6 (lower is better)
Translates to: RAAPLPQAASAS*QARTFSCVSQG
Trigger: GCCTTGTGACACACAGGAAAAGGTCCGAGCCTGCAAAGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TTTCTTAGGAAGAGCCCCATCCTCGGGCTGCACCTCTaGCTCAGGCGGCTTCTGCTTCTTTGCAGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: FLRKSPILGLHL*LRRLLLLCRLG
Trigger: TCCGAGCCTGCAAAGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAGGATGGGGCTCTTCCTAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTAGCTTCCTCTGCCTGACCAACAGTAGCTTCCTCTaGCTGACCCACCGTGGCTTCCTCTGCCTGATCCAC +
Preference number: 6 (lower is better)
Translates to: CSFLCLTNSSFL*LTHRGFLCLIH
Trigger: GTGGATCAGGCAGAGGAAGCCACGGTGGGTCAGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp GACCCAGCCTGGATTGCCTGGTCATCTGGCTGGGTCTaGGCTTTTATCTCCAAATCGTCTGCCTCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: DPAWIAWSSGWV*AFISKSSASPW
Trigger: CCAGGGAGAGGCAGACGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp GCCCTGGGTAGACCCAGCCTGGATTGCCTGGTCATCTaGCTGGGTCTGGGCTTTTATCTCCAAATCGTCTGC +
Preference number: 6 (lower is better)
Translates to: ALGRPSLDCLVI*LGLGFYLQIVC
Trigger: GCAGACGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp AACACACCTTCCTGTAGGCCCTGGGTAGACCCAGCCTaGATTGCCTGGTCATCTGGCTGGGTCTGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: NTPSCRPWVDPA*IAWSSGWVWAF
Trigger: AAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGGCCTACAGGAAGGTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp AGTAGCTTCCTCTGCCTGACCCACCGTGGCTTCCTCTaGCTGATCCACTGTGACTTTCTCTGTGTGGCCAAC +
Preference number: 6 (lower is better)
Translates to: SSFLCLTHRGFL*LIHCDFLCVAN
Trigger: GTTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCCACGGTGGGTCAGGCAGAGGAAGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp TCCTGTAGGCCCTGGGTAGACCCAGCCTGGATTGCCTaGTCATCTGGCTGGGTCTGGGCTTTTATCTCCAAA +
Preference number: 6 (lower is better)
Translates to: SCRPWVDPAWIA*SSGWVWAFISK
Trigger: TTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCAGGGCCTACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TTTGCCTTTTTCTTAGGAAGAGCCCCATCCTCGGGCTaGACCTCTGCCTCAGGCGGCTTCTGCTTCTTTGCA +
Preference number: 6 (lower is better)
Translates to: FAFFLGRAPSSG*TSASGGFCFFA
Trigger: TGCAAAGAAGCAGAAGCCGCCTGAGGCAGAGGTGCAGCCCGAGGATGGGGCTCTTCCTAAGAAAAAGGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTGACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTaGCTGACCCACTGTGGCTTCCTCTGCCTGACCAAC +
Preference number: 6 (lower is better)
Translates to: CDFLCVANCSFL*LTHCGFLCLTN
Trigger: GTTGGTCAGGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp TGGGTAGACCCAGCCTGGATTGCCTGGTCATCTGGCTaGGTCTGGGCTTTTATCTCCAAATCGTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: WVDPAWIAWSSG*VWAFISKSSAS
Trigger: AGAGGCAGACGATTTGGAGATAAAAGCCCAGACCCAGCCAGATGACCAGGCAATCCAGGCTGGGTCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTAGCTTCCTCTGCCTGACCCACTGTTGCTTCCTCTaGCTGATCCACTGTGACTTTCTCTGTGTGGCCAAC +
Preference number: 6 (lower is better)
Translates to: CSFLCLTHCCFL*LIHCDFLCVAN
Trigger: GTTGGCCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp GTGGCCAACTGTAGCTTCCTCTGCCTGACCCACTGTTaGTTCCTCTGCCTGATCCACTGTGACTTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: VANCSFLCLTHC*FLCLIHCDFLC
Trigger: ACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTGACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTaGCTGACCCACTGTTGCTTCCTCTGCCTGATCCAC +
Preference number: 6 (lower is better)
Translates to: CDFLCVANCSFL*LTHCCFLCLIH
Trigger: GTGGATCAGGCAGAGGAAGCAACAGTGGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTAGCTTCCTCTGCCTGACCCACTGTGGCTTCCTCTaGATGATCCACTGTGACTTTCTCTGTGTGGCCAAC +
Preference number: 6 (lower is better)
Translates to: CSFLCLTHCGFL*MIHCDFLCVAN
Trigger: GTTGGCCACACAGAGAAAGTCACAGTGGATCATGCAGAGGAAGCCACAGTGGGTCAGGCAGAGGAAGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTGGCTTCCTCTGCATGATCCACTGTGACTTTCTCTaGCTGTCCAACTGTAGCTTCCTCTGCCTGACCCAC +
Preference number: 6 (lower is better)
Translates to: CGFLCMIHCDFL*LSNCSFLCLTH
Trigger: GTGGGTCAGGCAGAGGAAGCTACAGTTGGACAGGCAGAGAAAGTCACAGTGGATCATGCAGAGGAAGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp TCTCTCCTGCCTCTCTTTCTGAGGACTGGCTGCTACTaGTCCCTTCTCGTCCTTCGTCTCTACCTGAATCTC +
Preference number: 6 (lower is better)
Translates to: SLLPLFLRTGCY*SLLVLRLYLNL
Trigger: GAGATTCAGGTAGAGACGAAGGACGAGAAGGGACCAGTAGCAGCCAGTCCTCAGAAAGAGAGGCAGGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTGACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTaGCTGACCAACAGTAGCTTCCTCTGCCCGATCAAC +
Preference number: 6 (lower is better)
Translates to: CDFLCVANCSFL*LTNSSFLCPIN
Trigger: GTTGATCGGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTGGGTTTTTCTGCCCAATCAACTGTAGCTTCCTCTaGCTGACCAACAGTAGCTTCCTCTGCCTGACCCAC +
Preference number: 6 (lower is better)
Translates to: CGFFCPINCSFL*LTNSSFLCLTH
Trigger: GTGGGTCAGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGATTGGGCAGAAAAACCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS TCA 72 bp TCCCGGATGCCATTACTGGGTTCTTCCAGACTATGTTaGTGTGTGGTTGCTGGTGATGGAGGAGCAGCAGAA +
Preference number: 6 (lower is better)
Translates to: SRMPLLGSSRLC*CVVAGDGGAAE
Trigger: TTCTGCTGCTCCTCCATCACCAGCAACCACACATCAACATAGTCTGGAAGAACCCAGTAATGGCATCCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS TCA 72 bp ACTTTCTCTGTGTGGCCAACTGTAGCTTCCTCTGCCTaGCCAACAGTAGCTTCCTCTGCCCGATCAACTGTA +
Preference number: 6 (lower is better)
Translates to: TFSVWPTVASSA*PTVASSARSTV
Trigger: TACAGTTGATCGGGCAGAGGAAGCTACTGTTGGTCAGGCAGAGGAAGCTACAGTTGGCCACACAGAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTAGCTTCCTCTGCCTGGCCAACTGTAGCTTTCTTTaGCTGGCTCAGTTCACCTTCCTTTGCCTGACTCAA +
Preference number: 6 (lower is better)
Translates to: CSFLCLANCSFL*LAQFTFLCLTQ
Trigger: TTGAGTCAGGCAAAGGAAGGTGAACTGAGCCAGGCAAAGAAAGCTACAGTTGGCCAGGCAGAGGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTAGCTTCCTTTGCTTGGCTCAATATAGCTTCCCCTaGCTGACCAACTGTAGCTTCTTCTGCCTGACCCAC +
Preference number: 6 (lower is better)
Translates to: CSFLCLAQYSFP*LTNCSFFCLTH
Trigger: GTGGGTCAGGCAGAAGAAGCTACAGTTGGTCAGGCAGGGGAAGCTATATTGAGCCAAGCAAAGGAAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp AGTAGCTTCCTCTGCCCGATCAACTGTAGCTTCCTCTaGCTGACCAACAACTGTAGCTTCCTTTGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: SSFLCPINCSFL*LTNNCSFLCLA
Trigger: AGCCAAGCAAAGGAAGCTACAGTTGTTGGTCAGGCAGAGGAAGCTACAGTTGATCGGGCAGAGGAAGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp TTCAGCAGCAGTCTTTCTCCTGTCATCTTTCCCACTTaGGGCACTTTCCCGGATGCCATTACTGGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: FSSSLSPVIFPT*GTFPDAITGFF
Trigger: GAAGAACCCAGTAATGGCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGACAGGAGAAAGACTGCTGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 72 bp CTTCAGCAGCAGTCTTTCTCCTGTCATCTTTCCCACTaGGGGCACTTTCCCGGATGCCATTACTGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: LQQQSFSCHLSH*GHFPGCHYWVL
Trigger: AAGAACCCAGTAATGGCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGACAGGAGAAAGACTGCTGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS TCA 72 bp GCTTTCTTTGCCTGGCTCAGTTCACCTTCCTTTGCCTaGCTCAATACAGTTTCCTTTGCCTGGGCCACTGTA +
Preference number: 6 (lower is better)
Translates to: AFFAWLSSPSFA*LNTVSFAWATV
Trigger: TACAGTGGCCCAGGCAAAGGAAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTGAGCCAGGCAAAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTAGCTTTCTTTGCCTGGCTCAGTTCACCTTCCTTTaGCTGACTCAATACAGTTTCCTTTGCCTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: CSFLCLAQFTFL*LTQYSFLCLGH
Trigger: GTGGCCCAGGCAAAGGAAACTGTATTGAGTCAGGCAAAGGAAGGTGAACTGAGCCAGGCAAAGAAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS GCA 72 bp TGTAGCTTCTTCTGCCTGACCCACTGTGGTTTCCTCTaGCTGATCCACTGTGACTTTCTCTGTGTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: CSFFCLTHCGFL*LIHCDFLCVVN
Trigger: ATTGACCACACAGAGAAAGTCACAGTGGATCAGGCAGAGGAAACCACAGTGGGTCAGGCAGAAGAAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp CTTCGGGGGTATGTTTCTTTGTCTCCTCAGCAGTCCTaGAACCGGCTTTGGGTTTTGTCTTGTTCGCTTTCT +
Preference number: 6 (lower is better)
Translates to: LRGYVSLSPQQS*NRLWVLSCSLS
Trigger: AGAAAGCGAACAAGACAAAACCCAAAGCCGGTTCCAGGACTGCTGAGGAGACAAAGAAACATACCCCCGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp TGCCATTACTGGGTTCTTCCAGACTATGTTGATGTGTaGTTGCTGGTGATGGAGGAGCAGCAGAAGTCACTG +
Preference number: 6 (lower is better)
Translates to: CHYWVLPDYVDV*LLVMEEQQKSL
Trigger: CAGTGACTTCTGCTGCTCCTCCATCACCAGCAACCACACATCAACATAGTCTGGAAGAACCCAGTAATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 72 bp CATTACTGGGTTCTTCCAGACTATGTTGATGTGTGGTaGCTGGTGATGGAGGAGCAGCAGAAGTCACTGACC +
Preference number: 6 (lower is better)
Translates to: HYWVLPDYVDVW*LVMEEQQKSLT
Trigger: GGTCAGTGACTTCTGCTGCTCCTCCATCACCAGCAACCACACATCAACATAGTCTGGAAGAACCCAGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 72 bp TTCCTCTGCCTGACCAACAACTGTAGCTTCCTTTGCTaGGCTCAATATAGCTTCCCCTGCCTGACCAACTGT +
Preference number: 6 (lower is better)
Translates to: FLCLTNNCSFLC*AQYSFPCLTNC
Trigger: ACAGTTGGTCAGGCAGGGGAAGCTATATTGAGCCAAGCAAAGGAAGCTACAGTTGTTGGTCAGGCAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 90 bp TCGGGGGTATGTTTCTTTGTCTCCTCAGCAGTCCTGGAACCGGCTTaGGGTTTTGTCTTGTTCGCTTTCTTCCTTCTCTTGAAGCAGAGT +
Preference number: 6 (lower is better)
Translates to: SGVCFFVSSAVLEPA*GFVLFAFFLLLKQS
Trigger: ACTCTGCTTCAAGAGAAGGAAGAAAGCGAACAAGACAAAACCCAAAGCCGGTTCCAGGACTGCTGAGGAGACAAAGAAACATACCCCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS TCA 72 bp CACATTCTCTCCCGAGGTGACGCTGTTGCTTATGTGTaGTTCTTGGCTCTTCTTACCATCTCTCACCAACAC +
Preference number: 6 (lower is better)
Translates to: HILSRGDAVAYV*FLALLTISHQH
Trigger: GTGTTGGTGAGAGATGGTAAGAAGAGCCAAGAATCACACATAAGCAACAGCGTCACCTCGGGAGAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 90 bp ATTTCTTTTCTTCAGCAGCAGTCTTTCTCCTGTCATCTTTCCCACTaGGGGCACTTTCCCGGATGCCATTACTGGGTTCTTCCAGACTAT +
Preference number: 6 (lower is better)
Translates to: ISFLQQQSFSCHLSH*GHFPGCHYWVLPDY
Trigger: ATAGTCTGGAAGAACCCAGTAATGGCATCCGGGAAAGTGCCCCAAGTGGGAAAGATGACAGGAGAAAGACTGCTGCTGAAGAAAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 72 bp TGTTTCTTTGTCTCCTCAGCAGTCCTGGAACCGGCTTaGGGTTTTGTCTTGTTCGCTTTCTTCCTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: CFFVSSAVLEPA*GFVLFAFFLLL
Trigger: CAAGAGAAGGAAGAAAGCGAACAAGACAAAACCCAAAGCCGGTTCCAGGACTGCTGAGGAGACAAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CCA 72 bp CGGTTTCTCTGTATCAATTCCATTTTCTTTCAGATCTaGTGCATGGCTCGATATAGCTTCCTCAGCCTGATC +
Preference number: 6 (lower is better)
Translates to: RFLCINSIFFQI*CMARYSFLSLI
Trigger: GATCAGGCTGAGGAAGCTATATCGAGCCATGCACCAGATCTGAAAGAAAATGGAATTGATACAGAGAAACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 72 bp TTAACCAGCTGTTCTACAGACAACTCGATAGCATTCTaGACGAGAGAAGATGCTGTTTCTATTAAGAGTGTT +
Preference number: 6 (lower is better)
Translates to: LTSCSTDNSIAF*TREDAVSIKSV
Trigger: AACACTCTTAATAGAAACAGCATCTTCTCTCGTCAAGAATGCTATCGAGTTGTCTGTAGAACAGCTGGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2
CDS CAA 90 bp ACCATTTCATTAACCAGCTGTTCTACAGACAACTCGATAGCATTCTaGACGAGAGAAGATGCTGTTTCTATTAAGAGTGTTTCATACTGT +
Preference number: 6 (lower is better)
Translates to: TISLTSCSTDNSIAF*TREDAVSIKSVSYC
Trigger: ACAGTATGAAACACTCTTAATAGAAACAGCATCTTCTCTCGTCAAGAATGCTATCGAGTTGTCTGTAGAACAGCTGGTTAATGAAATGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095610.9
ENSMUST00000154078.3
ENSMUST00000172992.2