Pregenerated sensors for AKAP17B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059708Ensembl transcript IDs: ENSMUST00000051906.13, ENSMUST00000133980.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTACCCTTCACCAATTCTGCGGATTCGAAACAACTATTCTTGTTaGAGATGGTCTCTAAATTCACTGATAGCCAGTTGCCAGGTCGGG | + |
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Preference number: 1 (lower is better) Translates to: CYPSPILRIRNNYSC*RWSLNSLIASCQVG Trigger: CCCGACCTGGCAACTGGCTATCAGTGAATTTAGAGACCATCTGCAACAAGAATAGTTGTTTCGAATCCGCAGAATTGGTGAAGGGTAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR GCA 90 bp | TGGCAAGAGGAGCAAGCTTTTGCACTTGAACCCTCTTCTAGGTCTTaGACTGTGGTTGCTAACAACATAGCTATATTTGGTTTGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: WQEEQAFALEPSSRS*TVVANNIAIFGLKF Trigger: AAACTTCAAACCAAATATAGCTATGTTGTTAGCAACCACAGTGCAAGACCTAGAAGAGGGTTCAAGTGCAAAAGCTTGCTCCTCTTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR TCA 90 bp | TCACCAAGCTTTAGAATTTACAGGTTTTCTATTTCCAAAGCTTGCTaGCATACCTGCAGTTACTCTGATCCACACTTGGAACTTTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: SPSFRIYRFSISKAC*HTCSYSDPHLELWQ Trigger: TTGCCAAAGTTCCAAGTGTGGATCAGAGTAACTGCAGGTATGTCAGCAAGCTTTGGAAATAGAAAACCTGTAAATTCTAAAGCTTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR TCA 90 bp | TGCTTTCCTGTAGAATGTCAAATTGAGACTGAACTGAAATTGTCATaGAAATGCTACCCTTCACCAATTCTGCGGATTCGAAACAACTAT | + |
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Preference number: 1 (lower is better) Translates to: CFPVECQIETELKLS*KCYPSPILRIRNNY Trigger: ATAGTTGTTTCGAATCCGCAGAATTGGTGAAGGGTAGCATTTTCATGACAATTTCAGTTCAGTCTCAATTTGACATTCTACAGGAAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR TCA 90 bp | ATCCAATGTAAGGCAGAAAGAGTTGGCCAAGCTTTCTACAGAGCATGCACTGTGTACCTGCAGTTACTCTaGTCCACACTTGGAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: IQCKAERVGQAFYRACTVYLQLL*STLGTL Trigger: CAAAGTTCCAAGTGTGGATCAGAGTAACTGCAGGTA...CACAGTGCATGCTCTGTAGAAAGCTTGGCCAACTCTTTCTGCCTTACATTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAAACTCTGATCCACACTTaGAACTTTGGCAAGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKTLIHT*NFGKRS Trigger: GCTCCTCTTGCCAAAGTTCCAAGTGTGGATCAGAGT...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAACCACACTTGGAACTTTaGCAAGAGGAGCAAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKPHLEL*QEEQAF Trigger: AAAAGCTTGCTCCTCTTGCCAAAGTTCCAAGTGTGG...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGAATACGCAGATCAGAGAAACAACCTGTGGCTTCTCCTTTAGGTACACCATCTTAATGCTAATCTaGTCCTTTACTGGCACCAAA | + |
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Preference number: 2 (lower is better) Translates to: KRNTQIRETTCGFSFRYTILMLI*SFTGTK Trigger: TTTGGTGCCAGTAAAGGAGCAGATTAGCATTAAGAT...GGTGTACCTAAAGGAGAAGCCACAGGTTGTTTCTCTGATCTGCGTATTCCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR GCA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAACATAGTCACAACCACTaGAGACACCAGGCTGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKHSHNH*RHQAAQ Trigger: TTGAGCAGCCTGGTGTCTGCAGTGGTTGTGACTATG...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAACACTCTCACCACATGTaGAGTCTTTCAGATTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKHSHHM*SLSDSV Trigger: TACTGAATCTGAAAGACTGCACATGTGGTGAGAGTG...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR TCA 90 bp | CACAGGGAGAAATCCCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGCTTTGCAAATCCCCCTaGTTTTATAAATTCGATCCT | + |
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Preference number: 2 (lower is better) Translates to: HREKSQPLHMLLRSAILLLCKSP*FYKFDP Trigger: AGGATCGAATTTATAAAATCAGGGGGATTTGCAAAG...CAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGGGATTTCTCCCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGTGTGCCAGGATGTTTTaGTATTTCCTTTGCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: VTEQSLFKEEYADQRNNLCARMF*YFLCKS Trigger: GGATTTGCAAAGGAAATATCAAAACATCCTGGCACA...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 90 bp | AACTCTCTGACAAGATATGAGCTGTTAGTGCTTTCAAAGGCTACTTaGGGCAACATTACTTTGAACATGAATAGTCATTGCTCGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NSLTRYELLVLSKAT*GNITLNMNSHCSSS Trigger: TGAGGACGAGCAATGACTATTCATGTTCAAAGTAATGTTGCCCAAAGTAGCCTTTGAAAGCACTAACAGCTCATATCTTGTCAGAGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR TCA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAACATACATGGTGCTTCTaGCCCAATCTACGAACACAT | + |
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Preference number: 2 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKHTWCF*PNLRTH Trigger: ATGTGTTCGTAGATTGGGTCAGAAGCACCATGTATG...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR TCA 90 bp | CTTACCGAGCAAAAATACCTAAAATCTCTCGAGAAACAACATCAAATGAGGGAAGCTTTGTTGGGAAAATaGAGGTCAACTAACTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTEQKYLKSLEKQHQMREALLGK*RSTNCP Trigger: AGGGCAGTTAGTTGACCTTCATTTTCCCAACAAAGC...TTCCCTCATTTGATGTTGTTTCTCGAGAGATTTTAGGTATTTTTGCTCGGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAAACAGCTAGAAAACTGTaGACTTTTCTTAAGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKTARKL*TFLKSF Trigger: GAAAGACTTAAGAAAAGTCCACAGTTTTCTAGCTGT...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 90 bp | TATGAGCTGTTAGTGCTTTCAAAGGCTACTTTGGGCAACATTACTTaGAACATGAATAGTCATTGCTCGTCCTCAAAAACAAAACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: YELLVLSKATLGNIT*NMNSHCSSSKTKQK Trigger: TTTTTGTTTTGTTTTTGAGGACGAGCAATGACTATTCATGTTCAAAGTAATGTTGCCCAAAGTAGCCTTTGAAAGCACTAACAGCTCATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR TCA 72 bp | CCAGTTGCCAGGTCGGGTATAGCTTTGTTGGGAAAATaGAGGTCAACTAACTGCCCTGAGGTCCTGAATCCA | + |
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Preference number: 3 (lower is better) Translates to: PVARSGIALLGK*RSTNCPEVLNP Trigger: TGGATTCAGGACCTCAGGGCAGTTAGTTGACCTTCATTTTCCCAACAAAGCTATACCCGACCTGGCAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR TCA 72 bp | TGGGAAAATGAAGGTCAACTAACTGCCCTGAGGTCCTaGATCCAATGTAAGGCAGAAAGAGTTGGCCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: WENEGQLTALRS*IQCKAERVGQA Trigger: AGCTTGGCCAACTCTTTCTGCCTTACATTGGATTCAGGACCTCAGGGCAGTTAGTTGACCTTCATTTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR GCA 72 bp | AAGGCAGAAAGAGTTGGCCAAGCTTTCTACAGAGCATaGACTGTGCTAAGGGGTAAGTCTTCAGGAATCTAC | + |
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Preference number: 3 (lower is better) Translates to: KAERVGQAFYRA*TVLRGKSSGIY Trigger: GTAGATTCCTGAAGACTTACCCCTTAGCACAGTGCATGCTCTGTAGAAAGCTTGGCCAACTCTTTCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CCA 72 bp | CTTGCTGACATACCTGCAGTTACTCTGATCCACACTTaGAACTTTGGCAAGAGGAGCAAGCTTTTGCACTTG | + |
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Preference number: 3 (lower is better) Translates to: LADIPAVTLIHT*NFGKRSKLLHL Trigger: CAAGTGCAAAAGCTTGCTCCTCTTGCCAAAGTTCCAAGTGTGGATCAGAGTAACTGCAGGTATGTCAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR GCA 72 bp | CCACAGACTGACATCCTACCTGCATCTGCTAGCAGATaGTTTCCTGTAGAATGTCAAATTGAGACTGAACTG | + |
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Preference number: 3 (lower is better) Translates to: PQTDILPASASR*FPVECQIETEL Trigger: CAGTTCAGTCTCAATTTGACATTCTACAGGAAAGCATCTGCTAGCAGATGCAGGTAGGATGTCAGTCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR GCA 72 bp | TGTTGCAGATGGTCTCTAAATTCACTGATAGCCAGTTaGCAGGTCGGGTATAGCTTTGTTGGGAAAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: CCRWSLNSLIAS*QVGYSFVGKMK Trigger: CTTCATTTTCCCAACAAAGCTATACCCGACCTGGCAACTGGCTATCAGTGAATTTAGAGACCATCTGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR TCA 72 bp | ATCACAGGGAGAAATCCCAACCTTTGCACATGCTGCTaGGATCTGCAATTTTATTGTCTTTTCTTACCGAGC | + |
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Preference number: 3 (lower is better) Translates to: ITGRNPNLCTCC*DLQFYCLFLPS Trigger: GCTCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGGGATTTCTCCCTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR GCA 72 bp | GAGCAAGCTTTTGCACTTGAACCCTCTTCTAGGTCTTaGACTGTGGTTGCTAACAACATAGCTATATTTGGT | + |
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Preference number: 3 (lower is better) Translates to: EQAFALEPSSRS*TVVANNIAIFG Trigger: ACCAAATATAGCTATGTTGTTAGCAACCACAGTGCAAGACCTAGAAGAGGGTTCAAGTGCAAAAGCTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CCA 72 bp | ATTCTGCGGATTCGAAACAACTATTCTTGTTGCAGATaGTCTCTAAATTCACTGATAGCCAGTTGCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: ILRIRNNYSCCR*SLNSLIASCQV Trigger: GACCTGGCAACTGGCTATCAGTGAATTTAGAGACCATCTGCAACAAGAATAGTTGTTTCGAATCCGCAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CAA 90 bp | AAGAGGAATACGCAGATCAGAGAAACAACCTGTGGCTTCTCCTTTAGGTACACCTCGAAACAACTATTCTaGTTGCAGATGGTCTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: KRNTQIRETTCGFSFRYTSKQLF*LQMVSK Trigger: TTTAGAGACCATCTGCAACAAGAATAGTTGTTTCGA...GGTGTACCTAAAGGAGAAGCCACAGGTTGTTTCTCTGATCTGCGTATTCCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CAA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGAGAGGAGAGTAATGTGTaGCCAGAAAACTCTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: PTFAHAAEICNFIVFSYREESNV*PENSLT Trigger: TGTCAGAGAGTTTTCTGGCAACACATTACTCTCCTC...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR GCA 72 bp | TCACCAATTCTGCGGATTCGAAACAACTATTCTTGTTaGAGATGGTCTCTAAATTCACTGATAGCCAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: SPILRIRNNYSC*RWSLNSLIASC Trigger: GCAACTGGCTATCAGTGAATTTAGAGACCATCTGCAACAAGAATAGTTGTTTCGAATCCGCAGAATTGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CAA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGATTGGGCAACATTACTTaGAACATGAATAGTCATTGC | + |
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Preference number: 3 (lower is better) Translates to: PTFAHAAEICNFIVFSYRLGNIT*NMNSHC Trigger: GCAATGACTATTCATGTTCAAAGTAATGTTGCCCAA...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CAA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGCCTATTTGTCCACTATaGTCCTCTTTGAAGATAGAT | + |
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Preference number: 3 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQPICPL*SSLKID Trigger: ATCTATCTTCAAAGAGGACAATAGTGGACAAATAGG...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR-3UTR CAA 90 bp | CTTACCGAGCAAAAATACCTAAAATCTCTCGAGAAACAACATCAAATGAGGGAAATAGCTATATTTGGTTaGAAGTTTTTCTTCCCGTCC | + |
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Preference number: 3 (lower is better) Translates to: LTEQKYLKSLEKQHQMREIAIFG*KFFFPS Trigger: GGACGGGAAGAAAAACTTCAAACCAAATATAGCTAT...TTCCCTCATTTGATGTTGTTTCTCGAGAGATTTTAGGTATTTTTGCTCGGTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR TCA 90 bp | GCTGTCAAAGGGCAATCAGCCCTTTTAGATTCTTCTTCTAGAACTGTCAGTACAGAAGAGTCCAGCTCCTaGCGGGCCTCAGGCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: AVKGQSALLDSSSRTVSTEESSS*RASGLV Trigger: AACCAAGCCTGAGGCCCGTCAGGAGCTGGACTCTTC...TGTACTGACAGTTCTAGAAGAAGAATCTAAAAGGGCTGATTGCCCTTTGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 72 bp | ATCCACACTTGGAACTTTGGCAAGAGGAGCAAGCTTTaGCACTTGAACCCTCTTCTAGGTCTTGCACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: IHTWNFGKRSKL*HLNPLLGLALW Trigger: CCACAGTGCAAGACCTAGAAGAGGGTTCAAGTGCAAAAGCTTGCTCCTCTTGCCAAAGTTCCAAGTGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR GCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAATCCTGCTCTTCGTCCTaGTCTATCCCTTGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKSCSSS*SIPCRL Trigger: GAGCCTGCAAGGGATAGAGCAGGACGAAGAGCAGGA...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | ATCCAATGTAAGGCAGAAAGAGTTGGCCAAGCTTTCTACAGAGCATGCACTGTGCTGGAACTGGACTCATaGTACTGGCCTTCATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: IQCKAERVGQAFYRACTVLELDS*YWPSSS Trigger: GCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAG...CACAGTGCATGCTCTGTAGAAAGCTTGGCCAACTCTTTCTGCCTTACATTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | GCTGTCAAAGGGCAATCAGCCCTTTTAGATTCTTCTTCTAGAACTGTCAGTACATGTTCCCACTCTCCCTaGGCATCTGTCGCTACTACT | + |
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Preference number: 4 (lower is better) Translates to: AVKGQSALLDSSSRTVSTCSHSP*ASVATT Trigger: AGTAGTAGCGACAGATGCCCAGGGAGAGTGGGAACA...TGTACTGACAGTTCTAGAAGAAGAATCTAAAAGGGCTGATTGCCCTTTGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 72 bp | ACTTGGAACTTTGGCAAGAGGAGCAAGCTTTTGCACTaGAACCCTCTTCTAGGTCTTGCACTGTGGTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: TWNFGKRSKLLH*NPLLGLALWLL Trigger: TAGCAACCACAGTGCAAGACCTAGAAGAGGGTTCAAGTGCAAAAGCTTGCTCCTCTTGCCAAAGTTCCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR TCA 90 bp | AAGAGGAATACGCAGATCAGAGAAACAACCTGTGGCTTCTCCTTTAGGTACACCAGGCTAATGTGTGTTTaGCAAGGCTTGAGGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KRNTQIRETTCGFSFRYTRLMCV*QGLRFF Trigger: GAAGAACCTCAAGCCTTGTCAAACACACATTAGCCT...GGTGTACCTAAAGGAGAAGCCACAGGTTGTTTCTCTGATCTGCGTATTCCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR GCA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGGGCGTGGTCTTCCTTTaGAAGGGACTGATCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: VTEQSLFKEEYADQRNNLGVVFL*KGLICN Trigger: ATTGCAGATCAGTCCCTTGCAAAGGAAGACCACGCC...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAATCAGGGCCCTTATCATaGTCTTGTTCTTCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKSGPLS*SCSSAP Trigger: GGGAGCTGAAGAACAAGACCATGATAAGGGCCCTGA...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | ATCCAATGTAAGGCAGAAAGAGTTGGCCAAGCTTTCTACAGAGCATGCACTGTGATTCATCACTGGAACTaGACTCATGGTACTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IQCKAERVGQAFYRACTVIHHWN*THGTGL Trigger: AAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAAT...CACAGTGCATGCTCTGTAGAAAGCTTGGCCAACTCTTTCTGCCTTACATTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR TCA 90 bp | ATCCAATGTAAGGCAGAAAGAGTTGGCCAAGCTTTCTACAGAGCATGCACTGTGACTTTTTCCTTTCTTTaGCGGTGTCTGTCTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: IQCKAERVGQAFYRACTVTFSFL*RCLSLS Trigger: GGAAAGAGACAGACACCGTCAAAGAAAGGAAAAAGT...CACAGTGCATGCTCTGTAGAAAGCTTGGCCAACTCTTTCTGCCTTACATTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR GCA 90 bp | CACAGGGAGAAATCCCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCAGTTGGAGACAGGTaGTCATCAGTTTCACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: HREKSQPLHMLLRSAILLSVGDR*SSVSLA Trigger: AGCAAGTGAAACTGATGAGCACCTGTCTCCAACTGA...CAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGGGATTTCTCCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGCGCACTGTGGTAAACTaGTCAGGGCAAATCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: VTEQSLFKEEYADQRNNLRTVVN*SGQIRL Trigger: AAGTCTGATTTGCCCTGACCAGTTTACCACAGTGCG...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGAGGCCTCTTTCTCTTTTaGGAAGTGTTCCCACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PTFAHAAEICNFIVFSYRGLFLF*EVFPLS Trigger: GGAGAGTGGGAACACTTCCCAAAAGAGAAAGAGGCC...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR GCA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGAACTGGAGCCTTTAGGTaGAAACCACTTACAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTFAHAAEICNFIVFSYRTGAFR*KPLTGQ Trigger: TTGCCCTGTAAGTGGTTTGCACCTAAAGGCTCCAGT...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGGCTCTCTCCATCAGTTaGAGACAGGTGCTCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQALSIS*RQVLIS Trigger: ACTGATGAGCACCTGTCTCCAACTGATGGAGAGAGC...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| 3UTR CAA 72 bp | CCCTTCACCAATTCTGCGGATTCGAAACAACTATTCTaGTTGCAGATGGTCTCTAAATTCACTGATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFTNSADSKQLF*LQMVSKFTDSQ Trigger: CTGGCTATCAGTGAATTTAGAGACCATCTGCAACAAGAATAGTTGTTTCGAATCCGCAGAATTGGTGAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR TCA 90 bp | CACAGGGAGAAATCCCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGAATTTTAGCCTTTCCTaGTTCCTCCTCTGTATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HREKSQPLHMLLRSAILLNFSLS*FLLCIA Trigger: AGCTATACAGAGGAGGAATCAGGAAAGGCTAAAATT...CAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGGGATTTCTCCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR TCA 90 bp | AACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGTGGCTTCCATGTGCTTGTTAGGTaGCTTGCTTCAAGACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNLSSKRNTQIRETTCGFHVLVR*LASRQN Trigger: ATTCTGTCTTGAAGCAAGTCACCTAACAAGCACATG...GAAGCCACAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAATCTTCCCATGTAACTTaGCTTTCAGGATCTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKSSHVT*LSGSEP Trigger: TGGTTCAGATCCTGAAAGCCAAGTTACATGGGAAGA...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CCA 90 bp | GAATTTACAGGTTTTCTATTTCCAAAGCTTGCTGACATACCTGCAGTTACTCTGGACGGGCCTCAGGCTTaGTTTTCACTTTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFLFPKLADIPAVTLDGPQA*FSLFPF Trigger: GAAAGGAAAAAGTGAAAACCAAGCCTGAGGCCCGTC...CAGAGTAACTGCAGGTATGTCAGCAAGCTTTGGAAATAGAAAACCTGTAAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CCA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGCTGGACTCATGGTACTaGCCTTCATCAAGCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQLDSWY*PSSSMC Trigger: ACACATGCTTGATGAAGGCCAGTACCATGAGTCCAG...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR TCA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGATTGGCTTTCAGGATCTaGACCAAACTTCGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTFAHAAEICNFIVFSYRLAFRI*TKLRVS Trigger: TGAAACACGAAGTTTGGTTCAGATCCTGAAAGCCAA...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAAGGATATCCACATTCTTaGTCTTCCCAAAACTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKGYPHS*SSQNSQ Trigger: TTGAGAGTTTTGGGAAGATCAAGAATGTGGATATCC...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR GCA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGAACCTTAATATTACATaGCAGAGCTTTGCCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTEQSLFKEEYADQRNNLNLNIT*QSFAIV Trigger: GACGATGGCAAAGCTCTGGCATGTAATATTAAGGTT...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR GCA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGAATCTTGCCTGTCTTTTaGGACTTACTCTCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PTFAHAAEICNFIVFSYRILPVF*DLLSGS Trigger: AGATCCTGAGAGTAAGTCGCAAAAGACAGGCAAGAT...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CCA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGACTTTCCTCCTCCTCTTaGTTCATGCTAAGAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTFAHAAEICNFIVFSYRLSSSS*FMLRVS Trigger: TGAAACTCTTAGCATGAACCAAGAGGAGGAGGAAAG...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CCA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAAATCTCAGTTCAGACTTaGACCTTTTACCTGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKISVQT*TFYLVP Trigger: GGGCACCAGGTAAAAGGTCCAAGTCTGAACTGAGAT...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR GCA 90 bp | CTTACCGAGCAAAAATACCTAAAATCTCTCGAGAAACAACATCAAATGAGGGAAATATCCCAAATAGAATaGTCTAGCCCGTTTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTEQKYLKSLEKQHQMREISQIE*SSPFWR Trigger: CCGCCAAAACGGGCTAGAGCATTCTATTTGGGATAT...TTCCCTCATTTGATGTTGTTTCTCGAGAGATTTTAGGTATTTTTGCTCGGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAAGACTTCCACGGAGTCTaGCTTTTCCTGGAGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKDFHGV*LFLEKY Trigger: ATATTTCTCCAGGAAAAGGCAGACTCCGTGGAAGTC...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CCA 90 bp | CTTACCGAGCAAAAATACCTAAAATCTCTCGAGAAACAACATCAAATGAGGGAAGTGGATTACACTGTGTaGATCCCAGACAGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTEQKYLKSLEKQHQMREVDYTV*IPDSSR Trigger: TCTTGAACTGTCTGGGATCCACACAGTGTAATCCAC...TTCCCTCATTTGATGTTGTTTCTCGAGAGATTTTAGGTATTTTTGCTCGGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CCA 90 bp | CTTACCGAGCAAAAATACCTAAAATCTCTCGAGAAACAACATCAAATGAGGGAAAACACCAACTTCCTGTaGATTACACTGTGTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LTEQKYLKSLEKQHQMRENTNFL*ITLCGS Trigger: GGATCCACACAGTGTAATCCACAGGAAGTTGGTGTT...TTCCCTCATTTGATGTTGTTTCTCGAGAGATTTTAGGTATTTTTGCTCGGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | CAGCAAAAGCAGTATTGTTACTTGGAGGCCCCAGGAAAGCATTTAGCAAAGAAAAACCTTCTTACATCCTaGTTATATTCTGACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQKQYCYLEAPGKHLAKKNLLTS*LYSDFH Trigger: GTGGAAGTCAGAATATAACCAGGATGTAAGAAGGTT...TTTCTTTGCTAAATGCTTTCCTGGGGCCTCCAAGTAACAATACTGCTTTTGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR TCA 90 bp | GAATTTACAGGTTTTCTATTTCCAAAGCTTGCTGACATACCTGCAGTTACTCTGTCTGTTTGCAAGTACTaGTTTTGTCAGTACCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFLFPKLADIPAVTLSVCKY*FCQYQE Trigger: CTCTTGGTACTGACAAAATCAGTACTTGCAAACAGA...CAGAGTAACTGCAGGTATGTCAGCAAGCTTTGGAAATAGAAAACCTGTAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAAAAGGCTTCGAATGTTTaGAAGCCAAAGTTCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKKASNV*KPKFKP Trigger: GGGTTTGAACTTTGGCTTGCAAACATTCGAAGCCTT...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR GCA 90 bp | GCTGTCAAAGGGCAATCAGCCCTTTTAGATTCTTCTTCTAGAACTGTCAGTACATTTTCTCATCCAAACTaGAATTTTCTTCAGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AVKGQSALLDSSSRTVSTFSHPN*NFLQEY Trigger: GTACTCCTGAAGAAAATTGCAGTTTGGATGAGAAAA...TGTACTGACAGTTCTAGAAGAAGAATCTAAAAGGGCTGATTGCCCTTTGACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGGAGTCTGCCTTTTCCTaGAGAAATATCCCAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQESAFS*RNIPNR Trigger: TCTATTTGGGATATTTCTCCAGGAAAAGGCAGACTC...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAAAGGTTCTATACATTCTaGGAGCAACACGTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKRFYTF*EQHVDH Trigger: ATGATCAACGTGTTGCTCCCAGAATGTATAGAACCT...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | GAATTTACAGGTTTTCTATTTCCAAAGCTTGCTGACATACCTGCAGTTACTCTGCTGTATTTCACATTCTaGTCAAACATACCGCTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFLFPKLADIPAVTLLYFTF*SNIPLV Trigger: TACTAGCGGTATGTTTGACCAGAATGTGAAATACAG...CAGAGTAACTGCAGGTATGTCAGCAAGCTTTGGAAATAGAAAACCTGTAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 72 bp | TGCACTGTGGTTGCTAACAACATAGCTATATTTGGTTaGAAGTTTTTCTTCCCGTCCACTGTTTCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTVVANNIAIFG*KFFFPSTVSCK Trigger: TTTACAAGAAACAGTGGACGGGAAGAAAAACTTCAAACCAAATATAGCTATGTTGTTAGCAACCACAGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 72 bp | GAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATaGATGTGCCAGGATGTTTTGATATTTCCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EYCHNFSSQVPL*MCQDVLIFPLQ Trigger: TTGCAAAGGAAATATCAAAACATCCTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 72 bp | TGTGGACTTTTCTTAAGTCTTTCTAACACCATGACTTaGTTAAGGACGAAGGAGGCACTTGTTACTATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CGLFLSLSNTMT*LRTKEALVTIL Trigger: TAGAATAGTAACAAGTGCCTCCTTCGTCCTTAACAAAGTCATGGTGTTAGAAAGACTTAAGAAAAGTCCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| 3UTR CAA 72 bp | TTAGTGCTTTCAAAGGCTACTTTGGGCAACATTACTTaGAACATGAATAGTCATTGCTCGTCCTCAAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVLSKATLGNIT*NMNSHCSSSKT Trigger: TGTTTTTGAGGACGAGCAATGACTATTCATGTTCAAAGTAATGTTGCCCAAAGTAGCCTTTGAAAGCACTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CCA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAATTCTTTCTCTTTTCTTaGGCTTTCCTTACTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKFFLFS*AFLTSS Trigger: AGATGAAGTAAGGAAAGCCCAAGAAAAGAGAAAGAA...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS TCA 90 bp | ATCAGGGCCCTTATCATGGTCTTGTTCTTCAGCTCCCTCAATCACTaGGGCCTCTTTCTCTTTTGGGAAGTGTTCCCACTCTCCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRALIMVLFFSSLNH*GLFLFWEVFPLSLG Trigger: GCCCAGGGAGAGTGGGAACACTTCCCAAAAGAGAAAGAGGCCTCAGTGATTGAGGGAGCTGAAGAACAAGACCATGATAAGGGCCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS GCA 90 bp | TCGGAGGATCTCCTCACAGGGCTTCTCTCCACTGGAGCCTTTAGGTaGAAACCACTTACAGGGCAAGCCTTCAAAGTAGATAGAATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEDLLTGLLSTGAFR*KPLTGQAFKVDRIR Trigger: CCTGATTCTATCTACTTTGAAGGCTTGCCCTGTAAGTGGTTTGCACCTAAAGGCTCCAGTGGAGAGAAGCCCTGTGAGGAGATCCTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS GCA 90 bp | TGCGACTTACTCTCAGGATCTTTAATATACACTTGTGGCCAGTCCTaGTCTTCGTCCTGCTCTATCCCTTGCAGGCTCTCCTCTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: CDLLSGSLIYTCGQS*SSSCSIPCRLSSSL Trigger: GAGTGAAGAGGAGAGCCTGCAAGGGATAGAGCAGGACGAAGAGCAGGACTGGCCACAAGTGTATATTAAAGATCCTGAGAGTAAGTCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS CCA 90 bp | CGGATGAAGTCTTTCGTACTCTTGGAGAGGCGCACTGTGGTAAACTaGTCAGGGCAAATCAGACTTTTCAGTTGGTCAAGAACTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RMKSFVLLERRTVVN*SGQIRLFSWSRTSQ Trigger: CTGGGAAGTTCTTGACCAACTGAAAAGTCTGATTTGCCCTGACCAGTTTACCACAGTGCGCCTCTCCAAGAGTACGAAAGACTTCATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CCA 90 bp | CTCGTGGTGCTTTCTAATTCATCACTGGAACTGGACTCATGGTACTaGCCTTCATCAAGCATGTGTTTCGGGGCTAGTTTCCCCCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVVLSNSSLELDSWY*PSSSMCFGASFPLV Trigger: AACTAGGGGGAAACTAGCCCCGAAACACATGCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAATTAGAAAGCACCACGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 90 bp | TTCTTCCTCGTGGTGCTTTCTAATTCATCACTGGAACTGGACTCATaGTACTGGCCTTCATCAAGCATGTGTTTCGGGGCTAGTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FFLVVLSNSSLELDS*YWPSSSMCFGASFP Trigger: GGGGAAACTAGCCCCGAAACACATGCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAATTAGAAAGCACCACGAGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 90 bp | GTCTCCTCTTCTTCCTCGTGGTGCTTTCTAATTCATCACTGGAACTaGACTCATGGTACTGGCCTTCATCAAGCATGTGTTTCGGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VSSSSSWCFLIHHWN*THGTGLHQACVSGL Trigger: TAGCCCCGAAACACATGCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAATTAGAAAGCACCACGAGGAAGAAGAGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CAA 90 bp | ATCCAATGTAAGGCAGAAAGAGTTGGCCAAGCTTTCTACAGAGCATGCACTGTGAGGCCTCTTTCTCTTTaGGGAAGTGTTCCCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IQCKAERVGQAFYRACTVRPLSL*GSVPTL Trigger: GAGAGTGGGAACACTTCCCAAAAGAGAAAGAGGCCT...CACAGTGCATGCTCTGTAGAAAGCTTGGCCAACTCTTTCTGCCTTACATTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CAA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGAGCTCTCTCCATCAGTaGGAGACAGGTGCTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTEQSLFKEEYADQRNNLSSLHQ*ETGAHQ Trigger: CTGATGAGCACCTGTCTCCAACTGATGGAGAGAGCT...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CCA 90 bp | CTCCTCAAGCCACGAGTATCTCAGTTCAGACTTGGACCTTTTACCTaGTGCCCTAACTCTGTGTTTAGAGTATTTTCCCTCATTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLKPRVSQFRLGPFT*CPNSVFRVFSLIVM Trigger: CATGACAATGAGGGAAAATACTCTAAACACAGAGTTAGGGCACCAGGTAAAAGGTCCAAGTCTGAACTGAGATACTCGTGGCTTGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CAA 90 bp | CACAGGGAGAAATCCCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGGCCACTGACATGTGCTaGTTAGGTGACTTGCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HREKSQPLHMLLRSAILLATDMC*LGDLLQ Trigger: TTGAAGCAAGTCACCTAACAAGCACATGTCAGTGGC...CAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGGGATTTCTCCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS TCA 90 bp | CCATTAAGCTTGATGATCTTCCCATGTAACTTGGCTTTCAGGATCTaGACCAAACTTCGTGTTTCAGCCTCACCCTCAAATCGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLSLMIFPCNLAFRI*TKLRVSASPSNRMK Trigger: CTTCATCCGATTTGAGGGTGAGGCTGAAACACGAAGTTTGGTTCAGATCCTGAAAGCCAAGTTACATGGGAAGATCATCAAGCTTAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS TCA 90 bp | GGAGAAATATCCCAAATAGAATGCTCTAGCCCGTTTTGGCGGCATTaGTGGCATATGAAGGGGCCTGTATTTCACATTCTGGTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GEISQIECSSPFWRH*WHMKGPVFHILVKH Trigger: ATGTTTGACCAGAATGTGAAATACAGGCCCCTTCATATGCCATCAATGCCGCCAAAACGGGCTAGAGCATTCTATTTGGGATATTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CAA 90 bp | AAGAGGAATACGCAGATCAGAGAAACAACCTGTGGCTTCTCCTTTAGGTACACCCACTTTTTCCTTTCTTaGACGGTGTCTGTCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRNTQIRETTCGFSFRYTHFFLS*TVSVSF Trigger: GAAAGAGACAGACACCGTCAAAGAAAGGAAAAAGTG...GGTGTACCTAAAGGAGAAGCCACAGGTTGTTTCTCTGATCTGCGTATTCCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CAA 90 bp | GCTGTCAAAGGGCAATCAGCCCTTTTAGATTCTTCTTCTAGAACTGTCAGTACATGGAAGCCTGGTAGCTaGGCATTTCTTCCCAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: AVKGQSALLDSSSRTVSTWKPGS*AFLPNL Trigger: TAGATTGGGAAGAAATGCCAAGCTACCAGGCTTCCA...TGTACTGACAGTTCTAGAAGAAGAATCTAAAAGGGCTGATTGCCCTTTGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS GCA 90 bp | ATAAAGTCAGTTGACTCCTGGTATTGTATAAAGGCTTCGAATGTTTaGAAGCCAAAGTTCAAACCCCCAAAGCTCCCACCTGTCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: IKSVDSWYCIKASNV*KPKFKPPKLPPVIT Trigger: AGTGATGACAGGTGGGAGCTTTGGGGGTTTGAACTTTGGCTTGCAAACATTCGAAGCCTTTATACAATACCAGGAGTCAACTGACTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS GCA 90 bp | CTCAAGCCACGAGTATCTCAGTTCAGACTTGGACCTTTTACCTGGTaGCCTAACTCTGTGTTTAGAGTATTTTCCCTCATTGTCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKPRVSQFRLGPFTW*PNSVFRVFSLIVMF Trigger: AAACATGACAATGAGGGAAAATACTCTAAACACAGAGTTAGGGCACCAGGTAAAAGGTCCAAGTCTGAACTGAGATACTCGTGGCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | AAGAGGAATACGCAGATCAGAGAAACAACCTGTGGCTTCTCCTTTAGGTACACCGCTTTTTCTTATGTGTaGAGAATCTTTGACTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KRNTQIRETTCGFSFRYTAFSYV*RIFDSV Trigger: CACGGAGTCAAAGATTCTCAACACATAAGAAAAAGC...GGTGTACCTAAAGGAGAAGCCACAGGTTGTTTCTCTGATCTGCGTATTCCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGGGGATATCCACATTCTaGATCTTCCCAAAACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTEQSLFKEEYADQRNNLGISTF*IFPKLS Trigger: TGAGAGTTTTGGGAAGATCAAGAATGTGGATATCCC...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGAAAGGCTTCGAATGTTaGCAAGCCAAAGTTCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: VTEQSLFKEEYADQRNNLKGFEC*QAKVQT Trigger: GGTTTGAACTTTGGCTTGCAAACATTCGAAGCCTTT...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGTTACATGCCAGAGCTTaGCCATCGTCTCCTTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQLHARA*PSSPLS Trigger: GCTTAAAGGAGACGATGGCAAAGCTCTGGCATGTAA...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CAA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGCCTTTCCTCCTCCTCTaGGTTCATGCTAAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQPFLLL*VHAKSF Trigger: GAAACTCTTAGCATGAACCAAGAGGAGGAGGAAAGG...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | GAATTTACAGGTTTTCTATTTCCAAAGCTTGCTGACATACCTGCAGTTACTCTGTATCTCAGTTCAGACTaGGACCTTTTACCTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EFTGFLFPKLADIPAVTLYLSSD*DLLPGA Trigger: GGCACCAGGTAAAAGGTCCAAGTCTGAACTGAGATA...CAGAGTAACTGCAGGTATGTCAGCAAGCTTTGGAAATAGAAAACCTGTAAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS TCA 90 bp | CAGCTTCATTCCTCGAAGGGATTCCATGGCTTTTATAAAGTCAGTTaGCTCCTGGTATTGTATAAAGGCTTCGAATGTTTGCAAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLHSSKGFHGFYKVS*LLVLYKGFECLQAK Trigger: TTTGGCTTGCAAACATTCGAAGCCTTTATACAATACCAGGAGTCAACTGACTTTATAAAAGCCATGGAATCCCTTCGAGGAATGAAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS-3UTR CAA 90 bp | GTGACTGAACAATCTCTCTTCAAAGAGGAATACGCAGATCAGAGAAACAACCTGTTCAAACCATTAAGCTaGATGATCTTCCCATGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VTEQSLFKEEYADQRNNLFKPLS*MIFPCN Trigger: GTTACATGGGAAGATCATCAAGCTTAATGGTTTGAA...CAGGTTGTTTCTCTGATCTGCGTATTCCTCTTTGAAGAGAGATTGTTCAGTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | AGATTCAGTAAGTCAAACCCAGTTTTAATAGTGAAACCAACCACTGGCTTCAAAACGGTTGATCACAGCTaGTCTAGAAGAATGGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: RFSKSNPVLIVKPTTGFKTVDHS*SRRMGF Trigger: GAATCCCATTCTTCTAGACAAGCTGTGATCAACCGT...TTTGAAGCCAGTGGTTGGTTTCACTATTAAAACTGGGTTTGACTTACTGAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | CCAACCTTTGCACATGCTGCTGAGATCTGCAATTTTATTGTCTTTTCTTACCGAAGTTTCCCCCTAGTTTaGCTTATGTTCTTGTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: PTFAHAAEICNFIVFSYRSFPLV*LMFLST Trigger: AGTTGACAAGAACATAAGCAAAACTAGGGGGAAACT...TCGGTAAGAAAAGACAATAAAATTGCAGATCTCAGCAGCATGTGCAAAGGTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS GCA 90 bp | TTCACTGAAATGTTTGGTGGTATCAAACATAACCTTAATATTACATaGCAGAGCTTTGCCATCGTCTCCTTTAAGCATCAGCTTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTEMFGGIKHNLNIT*QSFAIVSFKHQLHS Trigger: GGAATGAAGCTGATGCTTAAAGGAGACGATGGCAAAGCTCTGGCATGTAATATTAAGGTTATGTTTGATACCACCAAACATTTCAGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CCA 90 bp | ATTCCTCGAAGGGATTCCATGGCTTTTATAAAGTCAGTTGACTCCTaGTATTGTATAAAGGCTTCGAATGTTTGCAAGCCAAAGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IPRRDSMAFIKSVDS*YCIKASNVCKPKFK Trigger: TTTGAACTTTGGCTTGCAAACATTCGAAGCCTTTATACAATACCAGGAGTCAACTGACTTTATAAAAGCCATGGAATCCCTTCGAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGCTTCTTTCTCTTTTCTaGGGCTTTCCTTACTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQLLSLF*GFPYFI Trigger: GATGAAGTAAGGAAAGCCCAAGAAAAGAGAAAGAAG...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS TCA 90 bp | CTAAGTAGCTTCCATACTCAATGTGCTCCTGGTTGTCATCGTGACTaGCATAGTAATTATCAGAATCAAGCGTGTAATCTTCAGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSFHTQCAPGCHRD*HSNYQNQACNLQNF Trigger: AAAATTCTGAAGATTACACGCTTGATTCTGATAATTACTATGTCAGTCACGATGACAACCAGGAGCACATTGAGTATGGAAGCTACTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGTCTGGGAGCAACACGTaGATCATTAATTTTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQSGSNT*IINFAI Trigger: TATAGCAAAATTAATGATCAACGTGTTGCTCCCAGA...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS-3UTR CAA 90 bp | GAAATAGAATACTGTCACAACTTTTCTTCCCAAGTGCCATTATTGATGTGCCAGGACTTCGTTTTCTGTTaGCAAGTACTGATTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EIEYCHNFSSQVPLLMCQDFVFC*QVLILS Trigger: TGACAAAATCAGTACTTGCAAACAGAAAACGAAGTC...CTGGCACATCAATAATGGCACTTGGGAAGAAAAGTTGTGACAGTATTCTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CAA 72 bp | CTTCAGCTCCCTCAATCACTGAGGCCTCTTTCTCTTTaGGGAAGTGTTCCCACTCTCCCTGGGCATCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LQLPQSLRPLSL*GSVPTLPGHLS Trigger: CGACAGATGCCCAGGGAGAGTGGGAACACTTCCCAAAAGAGAAAGAGGCCTCAGTGATTGAGGGAGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS TCA 72 bp | CCAAACTTCGTGTTTCAGCCTCACCCTCAAATCGGATaGAGTCTTTCGTACTCTTGGAGAGGCGCACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PNFVFQPHPQIG*SLSYSWRGALW Trigger: CCACAGTGCGCCTCTCCAAGAGTACGAAAGACTTCATCCGATTTGAGGGTGAGGCTGAAACACGAAGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS GCA 72 bp | CTCCTCACAGGGCTTCTCTCCACTGGAGCCTTTAGGTaGAAACCACTTACAGGGCAAGCCTTCAAAGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLTGLLSTGAFR*KPLTGQAFKVD Trigger: ATCTACTTTGAAGGCTTGCCCTGTAAGTGGTTTGCACCTAAAGGCTCCAGTGGAGAGAAGCCCTGTGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS GCA 72 bp | TTAATATACACTTGTGGCCAGTCCTGCTCTTCGTCCTaGTCTATCCCTTGCAGGCTCTCCTCTTCACTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LIYTCGQSCSSS*SIPCRLSSSLR Trigger: CCTGAGTGAAGAGGAGAGCCTGCAAGGGATAGAGCAGGACGAAGAGCAGGACTGGCCACAAGTGTATATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS GCA 72 bp | CTCTCAGGATCTTTAATATACACTTGTGGCCAGTCCTaGTCTTCGTCCTGCTCTATCCCTTGCAGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSGSLIYTCGQS*SSSCSIPCRLS Trigger: GGAGAGCCTGCAAGGGATAGAGCAGGACGAAGAGCAGGACTGGCCACAAGTGTATATTAAAGATCCTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS CAA 90 bp | CGTCCTGCTCTATCCCTTGCAGGCTCTCCTCTTCACTCAGGCTGTTaGAGTGGTACCCCTGTTTTCTTAAATAGATCTGAAAGCCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPALSLAGSPLHSGC*SGTPVFLNRSESHP Trigger: GGGATGGCTTTCAGATCTATTTAAGAAAACAGGGGTACCACTCAAACAGCCTGAGTGAAGAGGAGAGCCTGCAAGGGATAGAGCAGGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS CAA 90 bp | GAGGCGCACTGTGGTAAACTGGTCAGGGCAAATCAGACTTTTCAGTaGGTCAAGAACTTCCCAGTTAGAGAAGGGCCTCACAGGTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: EAHCGKLVRANQTFQ*VKNFPVREGPHRFY Trigger: ATAGAACCTGTGAGGCCCTTCTCTAACTGGGAAGTTCTTGACCAACTGAAAAGTCTGATTTGCCCTGACCAGTTTACCACAGTGCGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CAA 90 bp | CTTGCCTGTCTTTTGCGACTTACTCTCAGGATCTTTAATATACACTaGTGGCCAGTCCTGCTCTTCGTCCTGCTCTATCCCTTGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LACLLRLTLRIFNIH*WPVLLFVLLYPLQA Trigger: AGCCTGCAAGGGATAGAGCAGGACGAAGAGCAGGACTGGCCACAAGTGTATATTAAAGATCCTGAGAGTAAGTCGCAAAAGACAGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS GCA 72 bp | CTTGAGGTAGAGGTGCTGAGCAGCACAGAGCTCTGTTaGCTCAGAGTTATCATAAACCACTGTGACTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LEVEVLSSTELC*LRVIINHCDCH Trigger: ATGACAGTCACAGTGGTTTATGATAACTCTGAGGCAACAGAGCTCTGTGCTGCTCAGCACCTCTACCTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 72 bp | GTGGTGCTTTCTAATTCATCACTGGAACTGGACTCATaGTACTGGCCTTCATCAAGCATGTGTTTCGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VVLSNSSLELDS*YWPSSSMCFGA Trigger: AGCCCCGAAACACATGCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAATTAGAAAGCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CAA 72 bp | CATCTCTCTGCCACTGACATGTGCTTGTTAGGTGACTaGCTTCAAGACAGAATCGGGCATACTCTGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HLSATDMCLLGD*LQDRIGHTLES Trigger: AGACTCCAGAGTATGCCCGATTCTGTCTTGAAGCAAGTCACCTAACAAGCACATGTCAGTGGCAGAGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS CAA 72 bp | CCTTCCTCCTCAAGCCACGAGTATCTCAGTTCAGACTaGGACCTTTTACCTGGTGCCCTAACTCTGTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSHEYLSSD*DLLPGALTLCL Trigger: TAAACACAGAGTTAGGGCACCAGGTAAAAGGTCCAAGTCTGAACTGAGATACTCGTGGCTTGAGGAGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CAA 90 bp | CTCCGTGACTGTGAATCTTTTCCACAGGATAGCTCTCTCCATCAGTaGGAGACAGGTGCTCATCAGTTTCACTTGCTATGTCCTTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LRDCESFPQDSSLHQ*ETGAHQFHLLCPCN Trigger: ATTGCAAGGACATAGCAAGTGAAACTGATGAGCACCTGTCTCCAACTGATGGAGAGAGCTATCCTGTGGAAAAGATTCACAGTCACGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CAA 90 bp | TTCCGGGGAGCTATTATAGACAGCCATAGACCTTTCCTCCTCCTCTaGGTTCATGCTAAGAGTTTCACTGAAGCACTCAGAATCGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: FRGAIIDSHRPFLLL*VHAKSFTEALRIAT Trigger: AGTAGCGATTCTGAGTGCTTCAGTGAAACTCTTAGCATGAACCAAGAGGAGGAGGAAAGGTCTATGGCTGTCTATAATAGCTCCCCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS TCA 72 bp | CTTATCATGGTCTTGTTCTTCAGCTCCCTCAATCACTaGGGCCTCTTTCTCTTTTGGGAAGTGTTCCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LIMVLFFSSLNH*GLFLFWEVFPL Trigger: GAGTGGGAACACTTCCCAAAAGAGAAAGAGGCCTCAGTGATTGAGGGAGCTGAAGAACAAGACCATGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS TCA 72 bp | TCCCAAATAGAATGCTCTAGCCCGTTTTGGCGGCATTaGTGGCATATGAAGGGGCCTGTATTTCACATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQIECSSPFWRH*WHMKGPVFHIL Trigger: CAGAATGTGAAATACAGGCCCCTTCATATGCCATCAATGCCGCCAAAACGGGCTAGAGCATTCTATTTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 72 bp | TCTTTCGTACTCTTGGAGAGGCGCACTGTGGTAAACTaGTCAGGGCAAATCAGACTTTTCAGTTGGTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFVLLERRTVVN*SGQIRLFSWSR Trigger: TCTTGACCAACTGAAAAGTCTGATTTGCCCTGACCAGTTTACCACAGTGCGCCTCTCCAAGAGTACGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 72 bp | TCCTCTTCTTCCTCGTGGTGCTTTCTAATTCATCACTaGAACTGGACTCATGGTACTGGCCTTCATCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSWCFLIHH*NWTHGTGLHQA Trigger: TGCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAATTAGAAAGCACCACGAGGAAGAAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CAA 90 bp | TGGCCTTCATCAAGCATGTGTTTCGGGGCTAGTTTCCCCCTAGTTTaGCTTATGTTCTTGTCAACTCTAATGGAATCACCTTCCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WPSSSMCFGASFPLV*LMFLSTLMESPSSS Trigger: TGAGGAGGAAGGTGATTCCATTAGAGTTGACAAGAACATAAGCAAAACTAGGGGGAAACTAGCCCCGAAACACATGCTTGATGAAGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 72 bp | ATGATGAGCTTCGGACTTCATAACACCAACTTCCTGTaGATTACACTGTGTGGATCCCAGACAGTTCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: MMSFGLHNTNFL*ITLCGSQTVQE Trigger: CTCTTGAACTGTCTGGGATCCACACAGTGTAATCCACAGGAAGTTGGTGTTATGAAGTCCGAAGCTCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS CCA 72 bp | CCACGAGTATCTCAGTTCAGACTTGGACCTTTTACCTaGTGCCCTAACTCTGTGTTTAGAGTATTTTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRVSQFRLGPFT*CPNSVFRVFSL Trigger: GAGGGAAAATACTCTAAACACAGAGTTAGGGCACCAGGTAAAAGGTCCAAGTCTGAACTGAGATACTCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 72 bp | CTTTCTAATTCATCACTGGAACTGGACTCATGGTACTaGCCTTCATCAAGCATGTGTTTCGGGGCTAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSNSSLELDSWY*PSSSMCFGASF Trigger: GAAACTAGCCCCGAAACACATGCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAATTAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CCA 72 bp | TCTTCCTCGTGGTGCTTTCTAATTCATCACTGGAACTaGACTCATGGTACTGGCCTTCATCAAGCATGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSWCFLIHHWN*THGTGLHQACV Trigger: AACACATGCTTGATGAAGGCCAGTACCATGAGTCCAGTTCCAGTGATGAATTAGAAAGCACCACGAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CAA 72 bp | CTATCCCTTGCAGGCTCTCCTCTTCACTCAGGCTGTTaGAGTGGTACCCCTGTTTTCTTAAATAGATCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSLAGSPLHSGC*SGTPVFLNRSE Trigger: TTCAGATCTATTTAAGAAAACAGGGGTACCACTCAAACAGCCTGAGTGAAGAGGAGAGCCTGCAAGGGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
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| CDS CAA 90 bp | ATGGAATCACCTTCCTCCTCAAGCCACGAGTATCTCAGTTCAGACTaGGACCTTTTACCTGGTGCCCTAACTCTGTGTTTAGAGTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: MESPSSSSHEYLSSD*DLLPGALTLCLEYF Trigger: AAAATACTCTAAACACAGAGTTAGGGCACCAGGTAAAAGGTCCAAGTCTGAACTGAGATACTCGTGGCTTGAGGAGGAAGGTGATTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CAA 72 bp | CGTGGTCTTCCTTTGCAAGGGACTGATCTGCAATCATaGTACTCTGTAAAGAATTCTGGTCAGAGACCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGLPLQGTDLQS*YSVKNSGQRPN Trigger: GTTTGGTCTCTGACCAGAATTCTTTACAGAGTACAATGATTGCAGATCAGTCCCTTGCAAAGGAAGACCACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
||
| CDS CAA 72 bp | ATAGATCTTCTGTTTCCTGCCACGGTTGATCACAGCTaGTCTAGAAGAATGGGATTCATTAGAACTGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: IDLLFPATVDHS*SRRMGFIRTGV Trigger: CACGCCAGTTCTAATGAATCCCATTCTTCTAGACAAGCTGTGATCAACCGTGGCAGGAAACAGAAGATCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
||
| CDS CAA 72 bp | TGTGAATCTTTTCCACAGGATAGCTCTCTCCATCAGTaGGAGACAGGTGCTCATCAGTTTCACTTGCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: CESFPQDSSLHQ*ETGAHQFHLLC Trigger: ACATAGCAAGTGAAACTGATGAGCACCTGTCTCCAACTGATGGAGAGAGCTATCCTGTGGAAAAGATTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CAA 90 bp | ATCTGTTTCATAGATCTTCTGTTTCCTGCCACGGTTGATCACAGCTaGTCTAGAAGAATGGGATTCATTAGAACTGGCGTGGTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ICFIDLLFPATVDHS*SRRMGFIRTGVVFL Trigger: AAGGAAGACCACGCCAGTTCTAATGAATCCCATTCTTCTAGACAAGCTGTGATCAACCGTGGCAGGAAACAGAAGATCTATGAAACAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051906.13 ENSMUST00000133980.2 |
||
| CDS TCA 72 bp | TTGATGATCTTCCCATGTAACTTGGCTTTCAGGATCTaGACCAAACTTCGTGTTTCAGCCTCACCCTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LMIFPCNLAFRI*TKLRVSASPSN Trigger: ATTTGAGGGTGAGGCTGAAACACGAAGTTTGGTTCAGATCCTGAAAGCCAAGTTACATGGGAAGATCATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS CAA 72 bp | TCAAGCATGTGTTTCGGGGCTAGTTTCCCCCTAGTTTaGCTTATGTTCTTGTCAACTCTAATGGAATCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSMCFGASFPLV*LMFLSTLMESP Trigger: AGGTGATTCCATTAGAGTTGACAAGAACATAAGCAAAACTAGGGGGAAACTAGCCCCGAAACACATGCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
||
| CDS TCA 72 bp | AGGAAACTGGGCTTTTTCTTATGTGTTGAGAATCTTTaGCTCCGTGACTGTGAATCTTTTCCACAGGATAGC | + |
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Preference number: 6 (lower is better) Translates to: RKLGFFLCVENL*LRDCESFPQDS Trigger: GCTATCCTGTGGAAAAGATTCACAGTCACGGAGTCAAAGATTCTCAACACATAAGAAAAAGCCCAGTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CAA 90 bp | TGTTTGGTGGTATCAAACATAACCTTAATATTACATGCCAGAGCTTaGCCATCGTCTCCTTTAAGCATCAGCTTCATTCCTCGAAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: CLVVSNITLILHARA*PSSPLSISFIPRRD Trigger: ATCCCTTCGAGGAATGAAGCTGATGCTTAAAGGAGACGATGGCAAAGCTCTGGCATGTAATATTAAGGTTATGTTTGATACCACCAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS TCA 72 bp | TCCTCGAAGGGATTCCATGGCTTTTATAAAGTCAGTTaGCTCCTGGTATTGTATAAAGGCTTCGAATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SSKGFHGFYKVS*LLVLYKGFECL Trigger: CAAACATTCGAAGCCTTTATACAATACCAGGAGTCAACTGACTTTATAAAAGCCATGGAATCCCTTCGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS CCA 72 bp | AGGGATTCCATGGCTTTTATAAAGTCAGTTGACTCCTaGTATTGTATAAAGGCTTCGAATGTTTGCAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RDSMAFIKSVDS*YCIKASNVCKP Trigger: TGGCTTGCAAACATTCGAAGCCTTTATACAATACCAGGAGTCAACTGACTTTATAAAAGCCATGGAATCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS TCA 72 bp | TTCCATACTCAATGTGCTCCTGGTTGTCATCGTGACTaGCATAGTAATTATCAGAATCAAGCGTGTAATCTT | + |
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Preference number: 6 (lower is better) Translates to: FHTQCAPGCHRD*HSNYQNQACNL Trigger: AAGATTACACGCTTGATTCTGATAATTACTATGTCAGTCACGATGACAACCAGGAGCACATTGAGTATGGAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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| CDS GCA 72 bp | ATGTTTGGTGGTATCAAACATAACCTTAATATTACATaGCAGAGCTTTGCCATCGTCTCCTTTAAGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: MFGGIKHNLNIT*QSFAIVSFKHQ Trigger: CTGATGCTTAAAGGAGACGATGGCAAAGCTCTGGCATGTAATATTAAGGTTATGTTTGATACCACCAAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051906.13 |
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