RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP13 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066406

Ensembl transcript IDs: ENSMUST00000166315.7, ENSMUST00000207239.2, ENSMUST00000207750.2, ENSMUST00000207923.2, ENSMUST00000207998.2, ENSMUST00000208708.2, ENSMUST00000239346.2

Found 991 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGCAGCAACTCCCCAGGCGTGCGTGCGTGCGTGCGTGCGTGCGTaGGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: QAATPQACVRACVRA*VRAGQAGGAAWCRQ
Trigger: CTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACGCACGCACGCACGCACGCACGCACGCACGCCTGGGGAGTTGCTGCTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp CAGGGTCCTAAGCAAGCAGCAACTCCCCAGGCGTGCGTGCGTGCGTaGGTGCGTGCGTGCGTGCGTGCGGGACAGGCAGGAGGGGCGGCG +
Preference number: 1 (lower is better)
Translates to: QGPKQAATPQACVRA*VRACVRAGQAGGAA
Trigger: CGCCGCCCCTCCTGCCTGTCCCGCACGCACGCACGCACGCACGCACGCACGCACGCACGCCTGGGGAGTTGCTGCTTGCTTAGGACCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp GGACTGGACGCTGAGGGGCAGTGGGCGTCCAGTGTAAGAGACTTGTaGACAGGGACGGCTCCACCGTCAGGCCAGGGTTGGAAGGCGGCT +
Preference number: 1 (lower is better)
Translates to: GLDAEGQWASSVRDL*TGTAPPSGQGWKAA
Trigger: AGCCGCCTTCCAACCCTGGCCTGACGGTGGAGCCGTCCCTGTGCACAAGTCTCTTACACTGGACGCCCACTGCCCCTCAGCGTCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp TCCAGGACCTGGGGTAGCTCAGGAGGACTGGACGCTGAGGGGCAGTaGGCGTCCAGTGTAAGAGACTTGTGCACAGGGACGGCTCCACCG +
Preference number: 1 (lower is better)
Translates to: SRTWGSSGGLDAEGQ*ASSVRDLCTGTAPP
Trigger: CGGTGGAGCCGTCCCTGTGCACAAGTCTCTTACACTGGACGCCCACTGCCCCTCAGCGTCCAGTCCTCCTGAGCTACCCCAGGTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp CTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTaGTTCGCAGTGGAAGTAGTCTCCCTGAGGGGGCGGCCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: LSGLGGSQAPPLKWK*FAVEVVSLRGRPEA
Trigger: TGCCTCTGGCCGCCCCCTCAGGGAGACTACTTCCACTGCGAAGCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp ATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTaGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTAGCGTGACCCTC +
Preference number: 1 (lower is better)
Translates to: ICACCCYEGGWEEPV*QWAGLAMGGASVTL
Trigger: GAGGGTCACGCTAGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp AGCCCTGTGCTTCTGAGGGCAAAACCAGGAACTCAAGGCCACCTGTaGAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGTACCTC +
Preference number: 1 (lower is better)
Translates to: SPVLLRAKPGTQGHL*STGLSEALLGSMYL
Trigger: GAGGTACATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTTCCTGGTTTTGCCCTCAGAAGCACAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp GCAGAGGCAGGGGCGAGGACAGCCAGCGAAACCCTGTGGTGGATTTaGGGCATGGCAGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCT +
Preference number: 1 (lower is better)
Translates to: AEAGARTASETLWWI*GMAGSAVTAGEVKA
Trigger: AGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAAATCCACCACAGGGTTTCGCTGGCTGTCCTCGCCCCTGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp GCGGTCACTGGCCTTCCTCTGCACAGGGAAGAGGGCAGGGCTCTCTaGTTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAA +
Preference number: 1 (lower is better)
Translates to: AVTGLPLHREEGRAL*FSVRSRWESGSSPQ
Trigger: TTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATCAGAGAGCCCTGCCCTCTTCCCTGTGCAGAGGAAGGCCAGTGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp GCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTaGAGAGGCCCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: AAEASRVLRHRFCAC*RGPLGSEAVAPAWF
Trigger: AAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp GACAGTGGCTCACTGCAGTGTCAGAGTGATCCTGGAGGCGGTCACTaGCCTTCCTCTGCACAGGGAAGAGGGCAGGGCTCTCTGATTTTC +
Preference number: 1 (lower is better)
Translates to: DSGSLQCQSDPGGGH*PSSAQGRGQGSLIF
Trigger: GAAAATCAGAGAGCCCTGCCCTCTTCCCTGTGCAGAGGAAGGCCAGTGACCGCCTCCAGGATCACTCTGACACTGCAGTGAGCCACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp GTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTaGGACAAGCCAATCCCAGCAGGTGTCAACCAAGGCAGGGCAGCT +
Preference number: 1 (lower is better)
Translates to: VSCPPSVEPRPQEET*DKPIPAGVNQGRAA
Trigger: AGCTGCCCTGCCTTGGTTGACACCTGCTGGGATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp ACCTCAGAGGGTACATTACCAAAGGACTGTCCTGCACACGCGAGCTaGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCTGGAG +
Preference number: 1 (lower is better)
Translates to: TSEGTLPKDCPAHAS*GRPQACTEQRMELE
Trigger: CTCCAGCTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGACAGTCCTTTGGTAATGTACCCTCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp TGCACAGGGCCATTTCACGGTACCCAATTTCAGAGGACCACAGGGTaGAATACTGAGTACCCACAGGCCGCCTGGCCGGTCAGATGCTTG +
Preference number: 1 (lower is better)
Translates to: CTGPFHGTQFQRTTG*NTEYPQAAWPVRCL
Trigger: CAAGCATCTGACCGGCCAGGCGGCCTGTGGGTACTCAGTATTTCACCCTGTGGTCCTCTGAAATTGGGTACCGTGAAATGGCCCTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp AAGGGCAAGAGCGCAACCAAGCAAACTGCATCTGAAAACCGTACGTaGGGAGGATGTGTGACTGAGGGGCCTGCACACAGCCACGCCTAC +
Preference number: 1 (lower is better)
Translates to: KGKSATKQTASENRT*GGCVTEGPAHSHAY
Trigger: GTAGGCGTGGCTGTGTGCAGGCCCCTCAGTCACACATCCTCCTCACGTACGGTTTTCAGATGCAGTTTGCTTGGTTGCGCTCTTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp GACAGCCAGCGAAACCCTGTGGTGGATTTGAGGCATGGCAGGCTCTaGTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAG +
Preference number: 1 (lower is better)
Translates to: DSQRNPVVDLRHGRL*CDSRRSQSWTWRRE
Trigger: CTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAAATCCACCACAGGGTTTCGCTGGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp CAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCCTGTGCTTCTaGGGGCAAAACCAGGAACTCAAGGCCACCTGTGAAGCACAGGCC +
Preference number: 1 (lower is better)
Translates to: QVTGRFLHNCSALCF*GQNQELKATCEAQA
Trigger: GGCCTGTGCTTCACAGGTGGCCTTGAGTTCCTGGTTTTGCCCTCAGAAGCACAGGGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp CCAGCGAAACCCTGTGGTGGATTTGAGGCATGGCAGGCTCTGCTGTaGCAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACT +
Preference number: 1 (lower is better)
Translates to: PAKPCGGFEAWQALL*QQEKSKLDLEKGAT
Trigger: AGTTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAAATCCACCACAGGGTTTCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp AATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTaGCCAGAGCATGCAGACAGGCATCTAGGACAGGCAGTATGTTTC +
Preference number: 1 (lower is better)
Translates to: NHTGDSSDEASLLPL*PEHADRHLGQAVCF
Trigger: GAAACATACTGCCTGTCCTAGATGCCTGTCTGCATGCTCTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp CCAGCCTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTaGACAACTGCTCAGCCCTGTGCTTCTGAGGGCAAAACCAGGAAC +
Preference number: 1 (lower is better)
Translates to: PACRSSTSTKLQVGF*TTAQPCASEGKTRN
Trigger: GTTCCTGGTTTTGCCCTCAGAAGCACAGGGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp GGAAGAGGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATaGACCTGCACAGACACTTCACTCTGTACTGAAAACAGGGTTTAC +
Preference number: 1 (lower is better)
Translates to: GRGAPMSTSAFLRAS*TCTDTSLCTENRVY
Trigger: GTAAACCCTGTTTTCAGTACAGAGTGAAGTGTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp CATGGCAGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTaGAGAAGGGAGCAACTAGCTTCTTGCTGTTACGGTTCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: HGRLCCDSRRSQSWT*RREQLASCCYGSSG
Trigger: CCCTGAAGAACCGTAACAGCAAGAAGCTAGTTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp TTGAGGCATGGCAGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTaGACTTGGAGAAGGGAGCAACTAGCTTCTTGCTGTTACGGTTCT +
Preference number: 1 (lower is better)
Translates to: LRHGRLCCDSRRSQS*TWRREQLASCCYGS
Trigger: AGAACCGTAACAGCAAGAAGCTAGTTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp AGGCTTCTGCCACCCCTCCCCGCTTATGGCAGCATTAGAATACTTTaGATTTCTCCACCTGGCCAGCAGGCAGCAAACTTAACTAGGAAT +
Preference number: 1 (lower is better)
Translates to: RLLPPLPAYGSIRIL*ISPPGQQAANLTRN
Trigger: ATTCCTAGTTAAGTTTGCTGCCTGCTGGCCAGGTGGAGAAATGCAAAGTATTCTAATGCTGCCATAAGCGGGGAGGGGTGGCAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp CCTGGCCGGTCAGATGCTTGCTCTTGGCTAAGCTGTCCTGACATTTaGGAAGAACTGTGTACACAGCTGTGTACTCCATGTGCACATGAA +
Preference number: 1 (lower is better)
Translates to: PGRSDACSWLSCPDI*EELCTQLCTPCAHE
Trigger: TTCATGTGCACATGGAGTACACAGCTGTGTACACAGTTCTTCTCAAATGTCAGGACAGCTTAGCCAAGAGCAAGCATCTGACCGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp CCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTTACCCTaGATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: PRLCPLLSLCVLMLP*MVHHICACCCYEGG
Trigger: GCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGGGTAACATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp GGTACGTATCAAAGGCAACTTAAGAGCCTTGGCAAGAACAGTGGGTaGGGTGACAAGAGCCTCGGGGATAGGAGGAGACATTACAAACTT +
Preference number: 1 (lower is better)
Translates to: GTYQRQLKSLGKNSG*GDKSLGDRRRHYKL
Trigger: AAGTTTGTAATGTCTCCTCCTATCCCCGAGGCTCTTGTCACCTCACCCACTGTTCTTGCCAAGGCTCTTAAGTTGCCTTTGATACGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp AGTCTGCACTACCTGCTCCTTGAGTCTGCTTGTGTTCCTCCAAAATaGAAGGCAGTTTCAGACCTCATTTGGAAAAACCCTCTGGGCCTT +
Preference number: 1 (lower is better)
Translates to: SLHYLLLESACVPPK*KAVSDLIWKNPLGL
Trigger: AAGGCCCAGAGGGTTTTTCCAAATGAGGTCTGAAACTGCCTTGCATTTTGGAGGAACACAAGCAGACTCAAGGAGCAGGTAGTGCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp AGCACTGATTTCTTTAGCTTGATAGAAAATCCTGATTTCTCAGTATaGGGAGCAGGACAGGACACAAGCCTGGTCCCTGGCAAACCACCC +
Preference number: 1 (lower is better)
Translates to: STDFFSLIENPDFSV*GAGQDTSLVPGKPP
Trigger: GGGTGGTTTGCCAGGGACCAGGCTTGTGTCCTGTCCTGCTCCCCATACTGAGAAATCAGGATTTTCTATCAAGCTAAAGAAATCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp GCACATGAAGAGGGTCACTGTATTAAGTCTGCACTACCTGCTCCTTaGGTCTGCTTGTGTTCCTCCAAAATGCAAGGCAGTTTCAGACCT +
Preference number: 1 (lower is better)
Translates to: AHEEGHCIKSALPAP*VCLCSSKMQGSFRP
Trigger: AGGTCTGAAACTGCCTTGCATTTTGGAGGAACACAAGCAGACTCAAGGAGCAGGTAGTGCAGACTTAATACAGTGACCCTCTTCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp ACTAGGAATGTTATGCTACAAGAAAGAAAACAAGGAGCTGGTCTCTaGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTCGCTGCTTCTCT +
Preference number: 1 (lower is better)
Translates to: TRNVMLQERKQGAGL*RGVCVCVCVCRCFS
Trigger: AGAGAAGCAGCGACACACACACACACACACACACACACCCCTGCAGAGACCAGCTCCTTGTTTTCTTTCTTGTAGCATAACATTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp CTGTTGTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTaGTGTGTGCACAGGGCCATTTCACGGTACCCAATTTCAGAGGAC +
Preference number: 1 (lower is better)
Translates to: LLFFLNEMRNTYKEG*CVHRAISRYPISED
Trigger: GTCCTCTGAAATTGGGTACCGTGAAATGGCCCTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAACAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp CATGCAGACAGGCATCTAGGACAGGCAGTATGTTTCTTTCTGATATaGATAAGAAGTGAGAGAGGTCAGCCTGGAGTGAGGAGATACAGA +
Preference number: 1 (lower is better)
Translates to: HADRHLGQAVCFFLI*IRSERGQPGVRRYR
Trigger: TCTGTATCTCCTCACTCCAGGCTGACCTCTCTCACTTCTTATTCATATCAGAAAGAAACATACTGCCTGTCCTAGATGCCTGTCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 90 bp AGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACTAGCTTCTTaGTGTTACGGTTCTTCAGGGAAGTACATCATAGTTTTAGTAGGA +
Preference number: 1 (lower is better)
Translates to: RRSQSWTWRREQLAS*CYGSSGKYIIVLVG
Trigger: TCCTACTAAAACTATGATGTACTTCCCTGAAGAACCGTAACAGCAAGAAGCTAGTTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 90 bp CAGACAGTGCAGACCATGGTTTTTGGTACACATGAGGCCTCTTGCTaGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAATGAGGAAT +
Preference number: 1 (lower is better)
Translates to: QTVQTMVFGTHEASC*SHKHLLFFLNEMRN
Trigger: ATTCCTCATTTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGTACCAAAAACCATGGTCTGCACTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 90 bp TTTCAGACCTCATTTGGAAAAACCCTCTGGGCCTTTAGGGAATCCTaGCATGTCTCAAACCATTACTTCCTTCTAGGGTCACTACTTTCA +
Preference number: 1 (lower is better)
Translates to: FQTSFGKTLWAFRES*HVSNHYFLLGSLLS
Trigger: TGAAAGTAGTGACCCTAGAAGGAAGTAATGGTTTGAGACATGTCAGGATTCCCTAAAGGCCCAGAGGGTTTTTCCAAATGAGGTCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGGCGTGCGTGCGTGCGTaGGGGACAGGCAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLACVRA*GTGRRG
Trigger: GCCCCTCCTGCCTGTCCCGCACGCACGCACGCACGC...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGAGGAGGACTGGACGCTaGGGGGCAGTGGGCGTCCAG +
Preference number: 2 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLRRTGR*GAVGVQ
Trigger: CTGGACGCCCACTGCCCCTCAGCGTCCAGTCCTCCT...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGGGGCACTGACAGGGTaGATGCTTTCCCACAGGGAC +
Preference number: 2 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVGALTG*MLSHRD
Trigger: GTCCCTGTGGGAAAGCATGCACCCTGTCAGTGCCCC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAACTCCCCAGGCGTGCGTaGGTGCGTGCGTGCGTGCGT +
Preference number: 2 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQLPRRA*VRACVR
Trigger: ACGCACGCACGCACGCACGCACGCACGCCTGGGGAG...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 90 bp GGAGGACTGGACGCTGAGGGGCAGTGGGCGTCCAGTGTAAGAGACTaGTGCACAGGGACGGCTCCACCGTCAGGCCAGGGTTGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: GGLDAEGQWASSVRD*CTGTAPPSGQGWKA
Trigger: CGCCTTCCAACCCTGGCCTGACGGTGGAGCCGTCCCTGTGCACAAGTCTCTTACACTGGACGCCCACTGCCCCTCAGCGTCCAGTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGCACAGAGCAACGCATaGAGCTGGAGGGCGAGGAGA +
Preference number: 2 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAAQSNA*SWRARR
Trigger: TCTCCTCGCCCTCCAGCTCCATGCGTTGCTCTGTGC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTACGGGGAGGGTGAGTaGGGGGCGAGGAATGAAGCT +
Preference number: 2 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAYGEGE*GARNEA
Trigger: AGCTTCATTCCTCGCCCCCCACTCACCCTCCCCGTA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGAGGGCAGGGCTCTCTaGTTTTCTGTCAGGTCTAGG +
Preference number: 2 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVEGRAL*FSVRSR
Trigger: CCTAGACCTGACAGAAAATCAGAGAGCCCTGCCCTC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGAGGTCAGCCTGGAGTaGGGAGATACAGACAGTGCA +
Preference number: 2 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAEVSLE*GDTDSA
Trigger: TGCACTGTCTGTATCTCCTCACTCCAGGCTGACCTC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGTGGCTGGGGGCACTaGCAGGGTGCATGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: SCTRELGKASSMHRATHGGGWGH*QGACFP
Trigger: GGGAAAGCATGCACCCTGTCAGTGCCCCCAGCCACC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTGGCAGGCTCTGCTGTaGCAGCAGGAGAAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAWQALL*QQEKSK
Trigger: CTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGGGGCACTGACAGGGTaGATGCTTTCCCACAGGGAC +
Preference number: 2 (lower is better)
Translates to: PAHASWGRPQACTEQRMEGALTG*MLSHRD
Trigger: GTCCCTGTGGGAAAGCATGCACCCTGTCAGTGCCCC...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTATAACTATCTGTCCCTaGAAGACCAGCCTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVITICP*KTSLQV
Trigger: GACCTGCAGGCTGGTCTTGCAGGGACAGATAGTTAT...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTACCTGGAGGCGGTCACTaGCCTTCCTCTGCACAGGGA +
Preference number: 2 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLPGGGH*PSSAQG
Trigger: TCCCTGTGCAGAGGAAGGCCAGTGACCGCCTCCAGG...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 90 bp GGCAGAGGCAGGGGCGAGGACAGCCAGCGAAACCCTGTGGTGGATTaGAGGCATGGCAGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGC +
Preference number: 2 (lower is better)
Translates to: GRGRGEDSQRNPVVD*RHGRLCCDSRRSQS
Trigger: GCTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAAATCCACCACAGGGTTTCGCTGGCTGTCCTCGCCCCTGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAATTCAGTGTCATACCCTaGGTAAGGCCAGGCCCACCC +
Preference number: 2 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQFSVIP*VRPGPP
Trigger: GGGTGGGCCTGGCCTTACTCAGGGTATGACACTGAA...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAAGGAGGATGTGTGACTaGGGGGCCTGCACACAGCCA +
Preference number: 2 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLRRMCD*GACTQP
Trigger: TGGCTGTGTGCAGGCCCCTCAGTCACACATCCTCCT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCGTGAGGAGGATGTGTaGCTGAGGGGCCTGCACACA +
Preference number: 2 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDREEDV*LRGLHT
Trigger: TGTGTGCAGGCCCCTCAGTCACACATCCTCCTCACG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCCTGCAAGACCAGCCTaGAGGTCATCAACAAGCACC +
Preference number: 2 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLPARPA*RSSTST
Trigger: GGTGCTTGTTGATGACCTGCAGGCTGGTCTTGCAGG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCCGTCAGGCCAGGGTTaGAAGGCGGCTGCGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SEALLGSMYLRGYITKGLPSGQG*KAAAPA
Trigger: TGCTGGCGCAGCCGCCTTCCAACCCTGGCCTGACGG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACGACGCTGAGGGGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDDAEGQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCCCCTCAGCGTC...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGGGTTGGAAGGCGGCTaGGCCAGCAGAGGAAATAGT +
Preference number: 2 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYGLEGG*ASRGNS
Trigger: ACTATTTCCTCTGCTGGCGCAGCCGCCTTCCAACCC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGAAGAGGGGTGGTGTGTaGACAGGGCCATTTCACGGT +
Preference number: 2 (lower is better)
Translates to: PAHASWGRPQACTEQRMEKRGGV*TGPFHG
Trigger: ACCGTGAAATGGCCCTGTGCACACACCACCCCTCTT...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGAGGGCCTCATGCACCTaGACAGACACTTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLRASCT*TDTSLC
Trigger: ACAGAGTGAAGTGTCTGTGCAGGTGCATGAGGCCCT...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGTAGCTCAGGAGGACTaGACGCTGAGGGGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: EASRVLRHRFCACCRGPLVAQED*TLRGSG
Trigger: CCCACTGCCCCTCAGCGTCCAGTCCTCCTGAGCTAC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGAGGTCAGCCTGGAGTaGGGAGATACAGACAGTGCA +
Preference number: 2 (lower is better)
Translates to: SCTRELGKASSMHRATHGEVSLE*GDTDSA
Trigger: TGCACTGTCTGTATCTCCTCACTCCAGGCTGACCTC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGGTGGCTGGGGGCACTaGCAGGGTGCATGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: CILPTFCRAQASGRNLRQGGWGH*QGACFP
Trigger: GGGAAAGCATGCACCCTGTCAGTGCCCCCAGCCACC...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGGAAGGCCTCAAGCATaGACAGAGCAACGCATGGAG +
Preference number: 2 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLGRPQA*TEQRME
Trigger: CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCC...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAACTAGTCCCAGGCAGGTaGCTGGGGGCACTGACAGGG +
Preference number: 2 (lower is better)
Translates to: CILPTFCRAQASGRNLRQLVPGR*LGALTG
Trigger: CCCTGTCAGTGCCCCCAGCCACCTGCCTGGGACTAG...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 90 bp GAGCAACGCATGGAGCTGGAGGGCGAGGAGAGAGACAGGCAGCACTaGACAGCTTCAAGGGCAAGAGCGCAACCAAGCAAACTGCATCTG +
Preference number: 2 (lower is better)
Translates to: EQRMELEGEERDRQH*TASRARAQPSKLHL
Trigger: CAGATGCAGTTTGCTTGGTTGCGCTCTTGCCCTTGAAGCTGTCAAGTGCTGCCTGTCTCTCTCCTCGCCCTCCAGCTCCATGCGTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATAGGAGGATGTGTGACTaGGGGGCCTGCACACAGCCA +
Preference number: 2 (lower is better)
Translates to: LPTFCRAQASGRNLRQANRRMCD*GACTQP
Trigger: TGGCTGTGTGCAGGCCCCTCAGTCACACATCCTCCT...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCCGTGAGGAGGATGTGTaGCTGAGGGGCCTGCACACA +
Preference number: 2 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCREEDV*LRGLHT
Trigger: TGTGTGCAGGCCCCTCAGTCACACATCCTCCTCACG...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACCCCCACACAGGGGCTaGTCCTTCTTGTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQPPHRG*SFLSRT
Trigger: GGTCCTGGACAAGAAGGAGCAGCCCCTGTGTGGGGG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATCTCTACTTCCTCTGTaGCCAGAGCATGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: SCTRELGKASSMHRATHGSLLPL*PEHADR
Trigger: CCTGTCTGCATGCTCTGGGCACAGAGGAAGTAGAGA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTCTCTACTTCCTCTGTaGCCAGAGCATGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDSLLPL*PEHADR
Trigger: CCTGTCTGCATGCTCTGGGCACAGAGGAAGTAGAGA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGGACGCTGAGGGGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: SEALLGSMYLRGYITKGLDAEGQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCCCCTCAGCGTC...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATAGGTCACAGCTGAAGTaGAGTCTGAGTGTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYRSQLK*SLSVCP
Trigger: GGGACAGACACTCAGACTCCACTTCAGCTGTGACCT...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGGCACAGAGCAACGCATaGAGCTGGAGGGCGAGGAGA +
Preference number: 2 (lower is better)
Translates to: SEALLGSMYLRGYITKGLAQSNA*SWRARR
Trigger: TCTCCTCGCCCTCCAGCTCCATGCGTTGCTCTGTGC...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAATGACAAAATGGGCATaGGACGGAAGAGGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLMTKWA*DGRGAP
Trigger: GGGAGCTCCTCTTCCGTCCCATGCCCATTTTGTCAT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTCCCCGGGTGGACAGTaGCTCACTGCAGTGTCAGAG +
Preference number: 2 (lower is better)
Translates to: LPTFCRAQASGRNLRQANSPGGQ*LTAVSE
Trigger: CTCTGACACTGCAGTGAGCCACTGTCCACCCGGGGA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTACGGGGAGGGTGAGTaGGGGGCGAGGAATGAAGCT +
Preference number: 2 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMYGEGE*GARNEA
Trigger: AGCTTCATTCCTCGCCCCCCACTCACCCTCCCCGTA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGGCCTTTAGGGAATCCTaGCATGTCTCAAACCATTAC +
Preference number: 2 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLAFRES*HVSNHY
Trigger: GTAATGGTTTGAGACATGTCAGGATTCCCTAAAGGC...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCGGGTTGGAAGGCGGCTaGGCCAGCAGAGGAAATAGT +
Preference number: 2 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCGLEGG*ASRGNS
Trigger: ACTATTTCCTCTGCTGGCGCAGCCGCCTTCCAACCC...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTATTACAGGTCGGTTTCTaGACAACTGCTCAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLLQVGF*TTAQPC
Trigger: ACAGGGCTGAGCAGTTGTGCAGAAACCGACCTGTAA...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACTAGTCCCAGGCAGGTaGCTGGGGGCACTGACAGGG +
Preference number: 2 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSLVPGR*LGALTG
Trigger: CCCTGTCAGTGCCCCCAGCCACCTGCCTGGGACTAG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAAGCTGTCCTGACATTTaGGAAGAACTGTGTACACAG +
Preference number: 2 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQSCPDI*EELCTQ
Trigger: CTGTGTACACAGTTCTTCTCAAATGTCAGGACAGCT...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGAGACAGGCAGCACTTaGCAGCTTCAAGGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMETGST*QLQGQE
Trigger: CTCTTGCCCTTGAAGCTGTCAAGTGCTGCCTGTCTC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCACTCAAGGCCACCTGTaGAGCACAGGCCTCAGCGAG +
Preference number: 2 (lower is better)
Translates to: QVINKHQVTGRFLHNCSATQGHL*STGLSE
Trigger: CTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGT...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGAAGGCCTCAAGCATaGACAGAGCAACGCATGGAG +
Preference number: 2 (lower is better)
Translates to: RAAEASRVLRHRFCACCRGRPQA*TEQRME
Trigger: CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCC...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCCTGCAAGACCAGCCTaGAGGTCATCAACAAGCACC +
Preference number: 2 (lower is better)
Translates to: LPTFCRAQASGRNLRQANPARPA*RSSTST
Trigger: GGTGCTTGTTGATGACCTGCAGGCTGGTCTTGCAGG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCCGTCAGGCCAGGGTTaGAAGGCGGCTGCGCCAGCA +
Preference number: 2 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQPSGQG*KAAAPA
Trigger: TGCTGGCGCAGCCGCCTTCCAACCCTGGCCTGACGG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGTTCTTGTCCAGGACCTaGGGTAGCTCAGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: SEALLGSMYLRGYITKGLFLSRT*GSSGGL
Trigger: CAGTCCTCCTGAGCTACCCCAGGTCCTGGACAAGAA...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAGTTTCAGACCTCATTTaGAAAAACCCTCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQVSDLI*KNPLGL
Trigger: AAGGCCCAGAGGGTTTTTCCAAATGAGGTCTGAAAC...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAAGTCAAAGCTGGACTTaGAGAAGGGAGCAACTAGCT +
Preference number: 2 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLSQSWT*RREQLA
Trigger: AGCTAGTTGCTCCCTTCTCCAAGTCCAGCTTTGACT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTGCTATGAGGGAGGCTaGGAAGAACCAGTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LPTFCRAQASGRNLRQANCYEGG*EEPVWQ
Trigger: CTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGTTCAGTGTCATACCCTaGGTAAGGCCAGGCCCACCC +
Preference number: 2 (lower is better)
Translates to: PEWFITSVLAVAMREAGKFSVIP*VRPGPP
Trigger: GGGTGGGCCTGGCCTTACTCAGGGTATGACACTGAA...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCACTACCTGCTCCTTaGGTCTGCTTGTGTTCCTCC +
Preference number: 2 (lower is better)
Translates to: CILPTFCRAQASGRNLRQALPAP*VCLCSS
Trigger: GGAGGAACACAAGCAGACTCAAGGAGCAGGTAGTGC...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCAGAGGACCACAGGGTaGAATACTGAGTACCCACAG +
Preference number: 2 (lower is better)
Translates to: SEALLGSMYLRGYITKGLQRTTG*NTEYPQ
Trigger: CTGTGGGTACTCAGTATTTCACCCTGTGGTCCTCTG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACAGAGGACCACAGGGTaGAATACTGAGTACCCACAG +
Preference number: 2 (lower is better)
Translates to: RAAEASRVLRHRFCACCRQRTTG*NTEYPQ
Trigger: CTGTGGGTACTCAGTATTTCACCCTGTGGTCCTCTG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAATCAGCCCTGTGCTTCTaGGGGCAAAACCAGGAACTC +
Preference number: 2 (lower is better)
Translates to: CILPTFCRAQASGRNLRQSALCF*GQNQEL
Trigger: GAGTTCCTGGTTTTGCCCTCAGAAGCACAGGGCTGA...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAATGCTTGCTGTTGCTATaGGGGAGGCTGGGAAGAACC +
Preference number: 2 (lower is better)
Translates to: CILPTFCRAQASGRNLRQCLLLL*GRLGRT
Trigger: GGTTCTTCCCAGCCTCCCTCATAGCAACAGCAAGCA...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTTACAGGTCGGTTTCTaGACAACTGCTCAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: EASRVLRHRFCACCRGPLLQVGF*TTAQPC
Trigger: ACAGGGCTGAGCAGTTGTGCAGAAACCGACCTGTAA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTTCCTCAGGGCCTCATaGACCTGCACAGACACTTCA +
Preference number: 2 (lower is better)
Translates to: LPTFCRAQASGRNLRQANFLRAS*TCTDTS
Trigger: TGAAGTGTCTGTGCAGGTGCATGAGGCCCTGAGGAA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGCATCACATCTGTGCTTaGTGTTGCTATGAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: EASRVLRHRFCACCRGPLHHICA*CCYEGG
Trigger: GCCTCCCTCATAGCAACAGCAAGCACAGATGTGATG...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAAGGTCACAGCTGAAGTaGAGTCTGAGTGTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: RAAEASRVLRHRFCACCRRSQLK*SLSVCP
Trigger: GGGACAGACACTCAGACTCCACTTCAGCTGTGACCT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTTTCAGACCTCATTTaGAAAAACCCTCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: SCTRELGKASSMHRATHGVSDLI*KNPLGL
Trigger: AAGGCCCAGAGGGTTTTTCCAAATGAGGTCTGAAAC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGACGTACAAAGAGGGGTaGTGTGTGCACAGGGCCATT +
Preference number: 2 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMTYKEG*CVHRAI
Trigger: AATGGCCCTGTGCACACACCACCCCTCTTTGTACGT...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCCTGATTTCTCAGTATaGGGAGCAGGACAGGACACA +
Preference number: 2 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMPDFSV*GAGQDT
Trigger: TGTGTCCTGTCCTGCTCCCCATACTGAGAAATCAGG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGAGACAGGCAGCACTTaGCAGCTTCAAGGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSETGST*QLQGQE
Trigger: CTCTTGCCCTTGAAGCTGTCAAGTGCTGCCTGTCTC...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTGTGTTCCTCCAAAATaGAAGGCAGTTTCAGACCTC +
Preference number: 2 (lower is better)
Translates to: EASRVLRHRFCACCRGPLCVPPK*KAVSDL
Trigger: GAGGTCTGAAACTGCCTTGCATTTTGGAGGAACACA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGTGTGTTCCTCCAAAATaGAAGGCAGTTTCAGACCTC +
Preference number: 2 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQCVPPK*KAVSDL
Trigger: GAGGTCTGAAACTGCCTTGCATTTTGGAGGAACACA...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGAGGGCCTCATGCACCTaGACAGACACTTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: PEWFITSVLAVAMREAGKRASCT*TDTSLC
Trigger: ACAGAGTGAAGTGTCTGTGCAGGTGCATGAGGCCCT...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACTCCCCTCTCTGTATTaGCAGAACCATCAGACAGAC +
Preference number: 2 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQLPSLY*QNHQTD
Trigger: GTCTGTCTGATGGTTCTGCCAATACAGAGAGGGGAG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCAGGAGAAGTCAAAGCTaGACTTGGAGAAGGGAGCAA +
Preference number: 2 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCRRSQS*TWRREQ
Trigger: TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCT...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCACTTCACTCTGTACTaGAAACAGGGTTTACACTGC +
Preference number: 2 (lower is better)
Translates to: LPTFCRAQASGRNLRQANHFTLY*KQGLHC
Trigger: GCAGTGTAAACCCTGTTTTCAGTACAGAGTGAAGTG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAACATGAGGCCTCTTGCTaGTCTCACAAACATCTGTTG +
Preference number: 2 (lower is better)
Translates to: CILPTFCRAQASGRNLRQHEASC*SHKHLL
Trigger: CAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATG...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAAGCCTTTAGGGAATCCTaGCATGTCTCAAACCATTAC +
Preference number: 2 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQAFRES*HVSNHY
Trigger: GTAATGGTTTGAGACATGTCAGGATTCCCTAAAGGC...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGACCTGTTGATCATTTaGCAAAGTAAGTCTTGTGAG +
Preference number: 2 (lower is better)
Translates to: RAAEASRVLRHRFCACCRDLLII*QSKSCE
Trigger: CTCACAAGACTTACTTTGTCAAATGATCAACAGGTC...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAAAGAGGGGTGGTGTGTaGACAGGGCCATTTCACGGT +
Preference number: 2 (lower is better)
Translates to: THEASCWSHKHLLFFLNEKRGGV*TGPFHG
Trigger: ACCGTGAAATGGCCCTGTGCACACACCACCCCTCTT...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGTCAGATGCTTGCTCTTaGCTAAGCTGTCCTGACATT +
Preference number: 2 (lower is better)
Translates to: PEWFITSVLAVAMREAGKSDACS*LSCPDI
Trigger: AATGTCAGGACAGCTTAGCCAAGAGCAAGCATCTGA...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAAGCTGTCCTGACATTTaGGAAGAACTGTGTACACAG +
Preference number: 2 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSSCPDI*EELCTQ
Trigger: CTGTGTACACAGTTCTTCTCAAATGTCAGGACAGCT...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCATCAGATGCTTGCTCTTaGCTAAGCTGTCCTGACATT +
Preference number: 2 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSSDACS*LSCPDI
Trigger: AATGTCAGGACAGCTTAGCCAAGAGCAAGCATCTGA...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 90 bp CAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACTAGCTTCTaGCTGTTACGGTTCTTCAGGGAAGTACATCATAGTTTTAGTAGG +
Preference number: 2 (lower is better)
Translates to: QEKSKLDLEKGATSF*LLRFFREVHHSFSR
Trigger: CCTACTAAAACTATGATGTACTTCCCTGAAGAACCGTAACAGCAAGAAGCTAGTTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp GGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTaGGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: GVRACVRACVRA*GTGRRGGVVQA
Trigger: TGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACGCACGCACGCACGCACGCACGCACGCACGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp TGCGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTaGAGGCAGGTCAAAGCGTTCCTGGAGAAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: CVRAGQAGGAAW*RQVKAFLEKLG
Trigger: GCCCAGCTTCTCCAGGAACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp AAGCAAGCAGCAACTCCCCAGGCGTGCGTGCGTGCGTaGGTGCGTGCGTGCGTGCGTGCGGGACAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: KQAATPQACVRA*VRACVRAGQAG
Trigger: TCCTGCCTGTCCCGCACGCACGCACGCACGCACGCACGCACGCACGCACGCCTGGGGAGTTGCTGCTTGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp GCGTGCGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTaGTGCAGGCAGGTCAAAGCGTTCCTGGAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: ACVRAGQAGGAA*CRQVKAFLEKL
Trigger: CAGCTTCTCCAGGAACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACGCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp CTTCAGGGTCCTAAGCAAGCAGCAACTCCCCAGGCGTaGGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCG +
Preference number: 3 (lower is better)
Translates to: LQGPKQAATPQA*VRACVRACVRA
Trigger: CGCACGCACGCACGCACGCACGCACGCACGCACGCACGCCTGGGGAGTTGCTGCTTGCTTAGGACCCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATACCGTCAGGCCAGGGTaGGAAGGCGGCTGCGCCAGC +
Preference number: 3 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYTVRPG*EGGCAS
Trigger: GCTGGCGCAGCCGCCTTCCAACCCTGGCCTGACGGT...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp GCTGAGGGGCAGTGGGCGTCCAGTGTAAGAGACTTGTaGACAGGGACGGCTCCACCGTCAGGCCAGGGTTGG +
Preference number: 3 (lower is better)
Translates to: AEGQWASSVRDL*TGTAPPSGQGW
Trigger: CCAACCCTGGCCTGACGGTGGAGCCGTCCCTGTGCACAAGTCTCTTACACTGGACGCCCACTGCCCCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp CTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTaGTTCGCAGTGGAAGTAGTCTCCCTGAGGGGGCGG +
Preference number: 3 (lower is better)
Translates to: LGGSQAPPLKWK*FAVEVVSLRGR
Trigger: CCGCCCCCTCAGGGAGACTACTTCCACTGCGAAGCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp TGGGGTAGCTCAGGAGGACTGGACGCTGAGGGGCAGTaGGCGTCCAGTGTAAGAGACTTGTGCACAGGGACG +
Preference number: 3 (lower is better)
Translates to: WGSSGGLDAEGQ*ASSVRDLCTGT
Trigger: CGTCCCTGTGCACAAGTCTCTTACACTGGACGCCCACTGCCCCTCAGCGTCCAGTCCTCCTGAGCTACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp GCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATaGAGCTGGAGGGCGAGGAGAGAGACAGGCAGCACT +
Preference number: 3 (lower is better)
Translates to: AGEGLKHAQSNA*SWRARRETGST
Trigger: AGTGCTGCCTGTCTCTCTCCTCGCCCTCCAGCTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTTGCAGACCATGGTTTTaGGTACACATGAGGCCTCTT +
Preference number: 3 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVCRPWF*VHMRPL
Trigger: AAGAGGCCTCATGTGTACCAAAAACCATGGTCTGCA...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp CTTCTGAGGGCAAAACCAGGAACTCAAGGCCACCTGTaGAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: LLRAKPGTQGHL*STGLSEALLGS
Trigger: ACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTTCCTGGTTTTGCCCTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp GGGGCGAGGACAGCCAGCGAAACCCTGTGGTGGATTTaGGGCATGGCAGGCTCTGCTGTGACAGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: GARTASETLWWI*GMAGSAVTAGE
Trigger: TTCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAAATCCACCACAGGGTTTCGCTGGCTGTCCTCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTAGTTTCAGACCTCATTaGGAAAAACCCTCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGASFRPH*EKPSGP
Trigger: AGGCCCAGAGGGTTTTTCCAAATGAGGTCTGAAACT...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp CTTCCTTCTAGGGTCACTACTTTCAGTGTCATACCCTaGGTAAGGCCAGGCCCACCCACGCCCCCGGCAGTC +
Preference number: 3 (lower is better)
Translates to: LPSRVTTFSVIP*VRPGPPTPPAV
Trigger: GACTGCCGGGGGCGTGGGTGGGCCTGGCCTTACTCAGGGTATGACACTGAAAGTAGTGACCCTAGAAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp GCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTaGAGAGGCCCTCTGGGGTCTGAGGCAGTAGCGCCT +
Preference number: 3 (lower is better)
Translates to: ASRVLRHRFCAC*RGPLGSEAVAP
Trigger: AGGCGCTACTGCCTCAGACCCCAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTaGTGCAGAGGCCCTCTGGGGTCTGAGGCAGTAGCG +
Preference number: 3 (lower is better)
Translates to: EASRVLRHRFCA*CRGPLGSEAVA
Trigger: CGCTACTGCCTCAGACCCCAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCTCCCCTCTCTGTATaGGCAGAACCATCAGACAGA +
Preference number: 3 (lower is better)
Translates to: SCTRELGKASSMHRATHGAPLSV*AEPSDR
Trigger: TCTGTCTGATGGTTCTGCCAATACAGAGAGGGGAGC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp AAACTGCATCTGAAAACCGTACGTGAGGAGGATGTGTaGCTGAGGGGCCTGCACACAGCCACGCCTACGGGC +
Preference number: 3 (lower is better)
Translates to: KLHLKTVREEDV*LRGLHTATPTG
Trigger: GCCCGTAGGCGTGGCTGTGTGCAGGCCCCTCAGTCACACATCCTCCTCACGTACGGTTTTCAGATGCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp CGGTACCCAATTTCAGAGGACCACAGGGTGAAATACTaGGTACCCACAGGCCGCCTGGCCGGTCAGATGCTT +
Preference number: 3 (lower is better)
Translates to: RYPISEDHRVKY*VPTGRLAGQML
Trigger: AAGCATCTGACCGGCCAGGCGGCCTGTGGGTACTCAGTATTTCACCCTGTGGTCCTCTGAAATTGGGTACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp GGCCTCATGCACCTGCACAGACACTTCACTCTGTACTaGAAACAGGGTTTACACTGCGGGGCCAGTCCTCGG +
Preference number: 3 (lower is better)
Translates to: GLMHLHRHFTLY*KQGLHCGASPR
Trigger: CCGAGGACTGGCCCCGCAGTGTAAACCCTGTTTTCAGTACAGAGTGAAGTGTCTGTGCAGGTGCATGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp GGTACATTACCAAAGGACTGTCCTGCACACGCGAGCTaGGGAAGGCCTCAAGCATGCACAGAGCAACGCATG +
Preference number: 3 (lower is better)
Translates to: GTLPKDCPAHAS*GRPQACTEQRM
Trigger: CATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGACAGTCCTTTGGTAATGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAACCGTCAGGCCAGGGTaGGAAGGCGGCTGCGCCAGC +
Preference number: 3 (lower is better)
Translates to: THEASCWSHKHLLFFLNETVRPG*EGGCAS
Trigger: GCTGGCGCAGCCGCCTTCCAACCCTGGCCTGACGGT...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTCCAGTGTAAGAGACTaGTGCACAGGGACGGCTCCA +
Preference number: 3 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSSVRD*CTGTAP
Trigger: TGGAGCCGTCCCTGTGCACAAGTCTCTTACACTGGA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTCTCACAAACATCTGTaGTTCTTCCTAAACGAAATG +
Preference number: 3 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGASHKHL*FFLNEM
Trigger: CATTTCGTTTAGGAAGAACAACAGATGTTTGTGAGA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGGCAACTTAAGAGCCTaGGCAAGAACAGTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: EASRVLRHRFCACCRGPLGNLRA*ARTVGE
Trigger: CTCACCCACTGTTCTTGCCAAGGCTCTTAAGTTGCC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp AGCGCAACCAAGCAAACTGCATCTGAAAACCGTACGTaGGGAGGATGTGTGACTGAGGGGCCTGCACACAGC +
Preference number: 3 (lower is better)
Translates to: SATKQTASENRT*GGCVTEGPAHS
Trigger: GCTGTGTGCAGGCCCCTCAGTCACACATCCTCCTCACGTACGGTTTTCAGATGCAGTTTGCTTGGTTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp GGTCGGTTTCTGCACAACTGCTCAGCCCTGTGCTTCTaGGGGCAAAACCAGGAACTCAAGGCCACCTGTGAA +
Preference number: 3 (lower is better)
Translates to: GRFLHNCSALCF*GQNQELKATCE
Trigger: TTCACAGGTGGCCTTGAGTTCCTGGTTTTGCCCTCAGAAGCACAGGGCTGAGCAGTTGTGCAGAAACCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp CCCTGTGGTGGATTTGAGGCATGGCAGGCTCTGCTGTaGCAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: PCGGFEAWQALL*QQEKSKLDLEK
Trigger: CTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAAATCCACCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp ATGTACCTCAGAGGGTACATTACCAAAGGACTGTCCTaGACACGCGAGCTGGGGAAGGCCTCAAGCATGCAC +
Preference number: 3 (lower is better)
Translates to: MYLRGYITKGLS*TRELGKASSMH
Trigger: GTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGACAGTCCTTTGGTAATGTACCCTCTGAGGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAATCCAGTGTAAGAGACTaGTGCACAGGGACGGCTCCA +
Preference number: 3 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQSSVRD*CTGTAP
Trigger: TGGAGCCGTCCCTGTGCACAAGTCTCTTACACTGGA...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTGCACTACCTGCTCCTaGAGTCTGCTTGTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMCTTCS*SLLVFL
Trigger: GAGGAACACAAGCAGACTCAAGGAGCAGGTAGTGCA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp GCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATaGACCTGCACAGACACTTCACTCTGTACTGAAAAC +
Preference number: 3 (lower is better)
Translates to: APMSTSAFLRAS*TCTDTSLCTEN
Trigger: GTTTTCAGTACAGAGTGAAGTGTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp CACCCTTCTCACAGAAGAGAATCCGCAGAAGGCTGCTaGCTCAGCCACAGCAATCTTCAGGGTCCTAAGCAA +
Preference number: 3 (lower is better)
Translates to: HPSHRRESAEGC*LSHSNLQGPKQ
Trigger: TTGCTTAGGACCCTGAAGATTGCTGTGGCTGAGTCAGCAGCCTTCTGCGGATTCTCTTCTGTGAGAAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp CAAAGGCAACTTAAGAGCCTTGGCAAGAACAGTGGGTaGGGTGACAAGAGCCTCGGGGATAGGAGGAGACAT +
Preference number: 3 (lower is better)
Translates to: QRQLKSLGKNSG*GDKSLGDRRRH
Trigger: ATGTCTCCTCCTATCCCCGAGGCTCTTGTCACCTCACCCACTGTTCTTGCCAAGGCTCTTAAGTTGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp CCACCCCTCCCCGCTTATGGCAGCATTAGAATACTTTaGATTTCTCCACCTGGCCAGCAGGCAGCAAACTTA +
Preference number: 3 (lower is better)
Translates to: PPLPAYGSIRIL*ISPPGQQAANL
Trigger: TAAGTTTGCTGCCTGCTGGCCAGGTGGAGAAATGCAAAGTATTCTAATGCTGCCATAAGCGGGGAGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp CAGCCTGGAGTGAGGAGATACAGACAGTGCAGACCATaGTTTTTGGTACACATGAGGCCTCTTGCTGGTCTC +
Preference number: 3 (lower is better)
Translates to: QPGVRRYRQCRP*FLVHMRPLAGL
Trigger: GAGACCAGCAAGAGGCCTCATGTGTACCAAAAACCATGGTCTGCACTGTCTGTATCTCCTCACTCCAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp ATTTCTCAGTATGGGGAGCAGGACAGGACACAAGCCTaGTCCCTGGCAAACCACCCTTCTCACAGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: ISQYGEQDRTQA*SLANHPSHRRE
Trigger: TTCTCTTCTGTGAGAAGGGTGGTTTGCCAGGGACCAGGCTTGTGTCCTGTCCTGCTCCCCATACTGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTGCACTACCTGCTCCTaGAGTCTGCTTGTGTTCCTC +
Preference number: 3 (lower is better)
Translates to: LERITLGTAVTRPLYFLCCTTCS*SLLVFL
Trigger: GAGGAACACAAGCAGACTCAAGGAGCAGGTAGTGCA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTGCAGACCATGGTTTTaGGTACACATGAGGCCTCTT +
Preference number: 3 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMCRPWF*VHMRPL
Trigger: AAGAGGCCTCATGTGTACCAAAAACCATGGTCTGCA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp AGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTaGACAACTGCTCAGCCCTGTGCTTCTGAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: RSSTSTKLQVGF*TTAQPCASEGK
Trigger: TTTGCCCTCAGAAGCACAGGGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp ATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTaGACAGACACTTCACTCTGTACTGAAAACAGGGTT +
Preference number: 3 (lower is better)
Translates to: MSTSAFLRASCT*TDTSLCTENRV
Trigger: AACCCTGTTTTCAGTACAGAGTGAAGTGTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR GCA 72 bp GTTATGCTACAAGAAAGAAAACAAGGAGCTGGTCTCTaGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTCGC +
Preference number: 3 (lower is better)
Translates to: VMLQERKQGAGL*RGVCVCVCVCR
Trigger: GCGACACACACACACACACACACACACACCCCTGCAGAGACCAGCTCCTTGTTTTCTTTCTTGTAGCATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTCTCACAAACATCTGTaGTTCTTCCTAAACGAAATG +
Preference number: 3 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSHKHL*FFLNEM
Trigger: CATTTCGTTTAGGAAGAACAACAGATGTTTGTGAGA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR-3UTR CAA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGCAATCTTCCAGAAAGTaGTTCACTAGATTCCACACG +
Preference number: 3 (lower is better)
Translates to: PEWFITSVLAVAMREAGKQSSRK*FTRFHT
Trigger: CGTGTGGAATCTAGTGAACAACTTTCTGGAAGATTG...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp TTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTaGTGTGTGCACAGGGCCATTTCACGGTACCCAATT +
Preference number: 3 (lower is better)
Translates to: FLNEMRNTYKEG*CVHRAISRYPI
Trigger: AATTGGGTACCGTGAAATGGCCCTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp AGGCATCTAGGACAGGCAGTATGTTTCTTTCTGATATaGATAAGAAGTGAGAGAGGTCAGCCTGGAGTGAGG +
Preference number: 3 (lower is better)
Translates to: RHLGQAVCFFLI*IRSERGQPGVR
Trigger: CCTCACTCCAGGCTGACCTCTCTCACTTCTTATTCATATCAGAAAGAAACATACTGCCTGTCCTAGATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp TCATTTGGAAAAACCCTCTGGGCCTTTAGGGAATCCTaGCATGTCTCAAACCATTACTTCCTTCTAGGGTCA +
Preference number: 3 (lower is better)
Translates to: SFGKTLWAFRES*HVSNHYFLLGS
Trigger: TGACCCTAGAAGGAAGTAATGGTTTGAGACATGTCAGGATTCCCTAAAGGCCCAGAGGGTTTTTCCAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CCA 72 bp CAGACCATGGTTTTTGGTACACATGAGGCCTCTTGCTaGTCTCACAAACATCTGTTGTTCTTCCTAAACGAA +
Preference number: 3 (lower is better)
Translates to: QTMVFGTHEASC*SHKHLLFFLNE
Trigger: TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGTACCAAAAACCATGGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR TCA 72 bp TGTCCTTTACTAAGCCTGTGTGTACTGATGTTACCCTaGATGGTTCATCACATCTGTGCTTGCTGTTGCTAT +
Preference number: 3 (lower is better)
Translates to: CPLLSLCVLMLP*MVHHICACCCY
Trigger: ATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGGGTAACATCAGTACACACAGGCTTAGTAAAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCGGTCTCGGAGCTCCTaGTCCCGGGCCTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVRSRSS*SRASHS
Trigger: TGAGTGGGAGGCCCGGGAGCAGGAGCTCCGAGACCG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCCAGGTCCTGCTGCCTaGGGCGGACCGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVPGPAA*GGPSLP
Trigger: GGGAAGAGACGGTCCGCCGCAGGCAGCAGGACCTGG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTCGGTCTCGGAGCTCCTaGTCCCGGGCCTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGARSRSS*SRASHS
Trigger: TGAGTGGGAGGCCCGGGAGCAGGAGCTCCGAGACCG...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGTCAGACTCACTCCCTaGCACTCTCTGGAGCATGCC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVVRLTP*HSLEHA
Trigger: GGCATGCTCCAGAGAGTGTCAGGGAGTGAGTCTGAC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTACCAGGCTCAAGGACTaGGTGAGGTCTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVTRLKD*VRSSCS
Trigger: GGAGCAGGAAGACCTCACTCAGTCCTTGAGCCTGGT...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTAGAGCCCTGTCTCTGTaGGGAGGTCCCTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGARALSL*GGPWQE
Trigger: CTCTTGCCAGGGACCTCCCCACAGAGACAGGGCTCT...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGATGTATCGTGGGCCTaGAGGCTCCCTTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVDVSWA*RLPFGC
Trigger: GCAGCCAAAAGGGAGCCTCCAGGCCCACGATACATC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTTCTCGGGCTGTGCGTTaGGGAGCAATCCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVSRAVR*GAILWQ
Trigger: TTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGA...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCGTTCCAGCTGTTTCTaGGCAGCCCGTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVRSSCF*AARSLS
Trigger: AGAGAGGCTACGGGCTGCCCAGAAACAGCTGGAACG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCTCTTCACCCTCTGCTaGTACTTCCGAAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVLFTLC*YFRSRA
Trigger: GGCCCTGCTTCGGAAGTACCAGCAGAGGGTGAAGAG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp GACGCTGAGGGGCAGTGGGCGTCCAGTGTAAGAGACTaGTGCACAGGGACGGCTCCACCGTCAGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DAEGQWASSVRD*CTGTAPPSGQG
Trigger: ACCCTGGCCTGACGGTGGAGCCGTCCCTGTGCACAAGTCTCTTACACTGGACGCCCACTGCCCCTCAGCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTAGTCCTGGTATCTCCTaGCCAGAGGGAGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVSPGIS*PEGGVL
Trigger: GAGAACACCTCCCTCTGGGCAGGAGATACCAGGACT...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTTGGAGGCCCTGACTTaGCTGATGACGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGALEALT*LMTAST
Trigger: AGTGGAGGCCGTCATCAGGCAAGTCAGGGCCTCCAA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACGCCAGGTCCTGGCGCTaGTTCTCCAGGCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDARSWR*FSRLRC
Trigger: GCAGCGGAGCCTGGAGAAGCAGCGCCAGGACCTGGC...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTCAGGAAGGCCCTCTCTaGAAGCACAGAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAQEGPL*KHRAAP
Trigger: AGGTGCTGCTCTGTGCTTCCAGAGAGGGCCTTCCTG...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGAGCCTCCTCTGTGTTaGAGCGGAAGAGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAEPPLC*SGRALS
Trigger: CGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGTGCTGGACGGGGCCTaGCTCTGCCCCTCGGGAACT +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLVLDGA*LCPSGT
Trigger: AGTTCCCGAGGGGCAGAGCCAGGCCCCGTCCAGCAC...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGTGCTGGACGGGGCCTaGCTCTGCCCCTCGGGAACT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYVLDGA*LCPSGT
Trigger: AGTTCCCGAGGGGCAGAGCCAGGCCCCGTCCAGCAC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTTCTGGCATCCCATCTaGACTTGGGCCTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAFWHPI*TWAWHG
Trigger: ACCATGCCAGGCCCAAGTTCAGATGGGATGCCAGAA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGGTCACACTGGTAAGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVGHTGK*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACTTACCAGTGTGACC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCTCTACAGCAGAGGATaGAGGTGGGTCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLLYSRG*RWVSGP
Trigger: GGGGCCACTGACCCACCTCCATCCTCTGCTGTAGAG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGGCACATCTGCAGCTTaGGTTGAGACAGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVGTSAA*VETVVA
Trigger: TGCCACTACTGTCTCAACCCAAGCTGCAGATGTGCC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTCTCGGTTGATCGCCTaGGTCCCCGGGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMESRLIA*VPGPCF
Trigger: GAAGCAAGGCCCGGGGACCCAGGCGATCAACCGAGA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTTACTCTCGGTCAGGTTaGCACTGGTACTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVYSRSG*HWYCGR
Trigger: CCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTA...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTTATTCCGCTCCTCTCTaGAGCTTGCATGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVYSAPL*SLHGPP
Trigger: TGGAGGTCCATGCAAGCTCCAGAGAGGAGCGGAATA...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGGCCGTCACCAGGCTaGGTGCGGCTTCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGGPSPG*VRLPLL
Trigger: GAGCAAAGGAAGCCGCACCCAGCCTGGTGACGGCCC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTCAGCGGTCCTCCTTTaGGAGCCTCCTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLSAVLL*EPPLCW
Trigger: CCAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCACCCTGCAGCATGCTaGGGAGTTCGTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLHPAAC*GVRGGE
Trigger: TTCACCTCCACGAACTCCTCAGCATGCTGCAGGGTG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTGGCACCAGGCTCTTTaGAGCCCCACCTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLWHQAL*SPTFSQ
Trigger: CTGACTGAAGGTGGGGCTGCAAAGAGCCTGGTGCCA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGCCAGGTCCTGGCGCTaGTTCTCCAGGCTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLARSWR*FSRLRC
Trigger: GCAGCGGAGCCTGGAGAAGCAGCGCCAGGACCTGGC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTGTGCTTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLCACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAAGCACA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGCCAGGTCCTGCTGCCTaGGGCGGACCGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQPGPAA*GGPSLP
Trigger: GGGAAGAGACGGTCCGCCGCAGGCAGCAGGACCTGG...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGTCCCTCTCCAGGTCCTaGTGCCTGCGGCGGACCGTC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQSLSRS*CLRRTV
Trigger: GACGGTCCGCCGCAGGCAGCAGGACCTGGAGAGGGA...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGATCTCTTCACCCTCTaGTGGTACTTCCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGADLFTL*WYFRSR
Trigger: CCTGCTTCGGAAGTACCAGCAGAGGGTGAAGAGATC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTTTTTTCACAGAGTCCTaGTATCTCCTGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVFFTES*YLLPRG
Trigger: CCCTCTGGGCAGGAGATACCAGGACTCTGTGAAAAA...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGGCACATCTGCAGCTTaGGTTGAGACAGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAGTSAA*VETVVA
Trigger: TGCCACTACTGTCTCAACCCAAGCTGCAGATGTGCC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAACGGTCAGGTTGGCACTaGTACTGTGGAAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQRSGWH*YCGRAV
Trigger: CACGGCCCTTCCACAGTACCAGTGCCAACCTGACCG...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTCTCTGGAGCTTGCATaGACCTCCACCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGASLELA*TSTISG
Trigger: TCCAGAGATGGTGGAGGTCCATGCAAGCTCCAGAGA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTCTCGGGCTGTGCGTTaGGGAGCAATCCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLSRAVR*GAILWQ
Trigger: TTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLRLARS*RCFSRL
Trigger: GAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCTGGTTGCCAGGAACTaGGCTGCATCATACGCCTCA +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLLVARN*AASYAS
Trigger: TGAGGCGTATGATGCAGCTCAGTTCCTGGCAACCAG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGTCAGACTCACTCCCTaGCACTCTCTGGAGCATGCC +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEVRLTP*HSLEHA
Trigger: GGCATGCTCCAGAGAGTGTCAGGGAGTGAGTCTGAC...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCATTTCATCACTGGGTaGGTGAAAGAGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVHFITG*VKEVRL
Trigger: GAGTCTGACCTCTTTCACTCACCCAGTGATGAAATG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGCGCTCCTTGGGCTGTaGAGACTTGTTTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAALLGL*RLVSHD
Trigger: ATCATGAGAAACAAGTCTTCACAGCCCAAGGAGCGC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCTCATACTTCTCCTATaGATGGGAGGTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVLILLL*MGGLLT
Trigger: TGTCAGGAGACCTCCCATTCATAGGAGAAGTATGAG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTCTTCAGGTGTCTGAATaGCAGTGCCACCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGALQVSE*QCHLLI
Trigger: GATGAGAAGGTGGCACTGGCATTCAGACACCTGAAG...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTTGCCAGAGAGAAACTaGTGGCTGGAGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGALPERN*WLEVIP
Trigger: AGGTATCACCTCCAGCCAGCAGTTTCTCTCTGGCAA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCTATCTTTGCCATCTTaGCCCAGAGCTGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVLSLPS*PRAVEL
Trigger: AAGTTCCACAGCTCTGGGGCAAGATGGCAAAGATAG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGGGTGTGTGCTGCTGTaGTTTCTCCTCGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEGCVLL*FLLGTE
Trigger: CTCTGTGCCGAGGAGAAAGCACAGCAGCACACACCC...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGGACTGTGTCAGCTTGTaGGTCTTCTGGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLDCVSL*VFWAEG
Trigger: ACCCTCTGCCCAGAAGACCCACAAGCTGACACAGTC...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACTCTACAGCAGAGGATaGAGGTGGGTCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLYSRG*RWVSGP
Trigger: GGGGCCACTGACCCACCTCCATCCTCTGCTGTAGAG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTAGCTGTGGAACTTTCTaGAACCACTACACTGACACC +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVSCGTF*NHYTDT
Trigger: GGTGTCAGTGTAGTGGTTCCAGAAAGTTCCACAGCT...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTCTTGCCCCAGAGCTGTaGAACTTTCTGGAACCACTA +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGALAPEL*NFLEPL
Trigger: TAGTGGTTCCAGAAAGTTCCACAGCTCTGGGGCAAG...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACAGAGCCCTGTCTCTGTaGGGAGGTCCCTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDRALSL*GGPWQE
Trigger: CTCTTGCCAGGGACCTCCCCACAGAGACAGGGCTCT...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCCAATGAGCCTGATTTaGTTACAGAAGGTGCAGACG +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVPMSLI*LQKVQT
Trigger: CGTCTGCACCTTCTGTAACCAAATCAGGCTCATTGG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGAACTTTTGTCTGGCTaGCTGAGCCCAGTATATGGA +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVELLSG*LSPVYG
Trigger: TCCATATACTGGGCTCAGCCAGCCAGACAAAAGTTC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGACCCAAAGAGTCGGGTaGAAGTGGAGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMETQRVG*KWRCWT
Trigger: CGTCCAGCACCTCCACTTCCACCCGACTCTTTGGGT...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp AGGGGCGAGGACAGCCAGCGAAACCCTGTGGTGGATTaGAGGCATGGCAGGCTCTGCTGTGACAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGEDSQRNPVVD*RHGRLCCDSRR
Trigger: TCTCCTGCTGTCACAGCAGAGCCTGCCATGCCTCAAATCCACCACAGGGTTTCGCTGGCTGTCCTCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATTCAGCGGTCCTCCTTTaGGAGCCTCCTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYSAVLL*EPPLCW
Trigger: CCAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGA...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTACACCCTGCAGCATGCTaGGGAGTTCGTGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLHPAAC*GVRGGE
Trigger: TTCACCTCCACGAACTCCTCAGCATGCTGCAGGGTG...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCTTCTCCTGCTCAATaGGAGAGCTGGGGCGAGATG +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGASPAQ*ESWGEM
Trigger: CATCTCGCCCCAGCTCTCTCATTGAGCAGGAGAAGC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAACAGGCTCACAGGCGTTaGCCCTTCCTTGTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQQAHRR*PFLVVD
Trigger: ATCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTG...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTGGCACCAGGCTCTTTaGAGCCCCACCTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDWHQAL*SPTFSQ
Trigger: CTGACTGAAGGTGGGGCTGCAAAGAGCCTGGTGCCA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCTGATTACAATGGAGTaGCTCAGACGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLLITME*LRRTWQ
Trigger: CTGCCAGGTGCGTCTGAGGCACTCCATTGTAATCAG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATCCTCTGGCAAGGGAGTaGTGCACTCAGTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYPLARE*CTQSCP
Trigger: GGGACATGACTGAGTGCAGCACTCCCTTGCCAGAGG...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGCCCCTTCCTTGTTGTaGATGCTGAGAGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYAPSLL*MLRAPR
Trigger: CCGTGGAGCTCTCAGCATCCACAACAAGGAAGGGGC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAGCTGCTCCAGGAATCTaGCTCCCCTGCATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQAAPGI*LPCIFL
Trigger: GAGGAAAATGCAGGGGAGCCAGATTCCTGGAGCAGC...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGGCTGGAGGTGATACCTaGTCTGGCGCTAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLAGGDT*SGASSF
Trigger: GAAAGAACTAGCGCCAGACCAGGTATCACCTCCAGC...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCCAGAGAGAAACTGCTaGCTGGAGGTGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLPERNC*LEVIPG
Trigger: ACCAGGTATCACCTCCAGCCAGCAGTTTCTCTCTGG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGAGCAGAGGATGGAGGTaGGTCAGTGGCCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQSRGWR*VSGPVS
Trigger: GGAGACGGGGCCACTGACCCACCTCCATCCTCTGCT...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATCAGGGCAGGGCTCTATaGCACACCAGCTTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYQGRAL*HTSFLG
Trigger: ACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTG...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTCGCATTGAACTCCGCTaGTTCATTTCTGCATCACTG +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGARIELR*FISASL
Trigger: CAGTGATGCAGAAATGAACCAGCGGAGTTCAATGCG...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAAAAGGCTTCATGCACTaGCTGCAGCTGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQKGFMH*LQLMGP
Trigger: GGGTCCCATCAGCTGCAGCCAGTGCATGAAGCCTTT...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGAGCCTCCTCTGTGTTaGAGCGGAAGAGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGEPPLC*SGRALS
Trigger: CGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLRLARS*RCFSRL
Trigger: GAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCGTTCCAGCTGTTTCTaGGCAGCCCGTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDRSSCF*AARSLS
Trigger: AGAGAGGCTACGGGCTGCCCAGAAACAGCTGGAACG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTAGAACTCATCCGAATTaGGCAAGAAGGATGGGATCC +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGARTHPN*ARRMGS
Trigger: GGATCCCATCCTTCTTGCCCAATTCGGATGAGTTCT...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTGGAAGTGGAGGTGCTaGACGGGGCCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANWKWRC*TGPGSA
Trigger: GGCAGAGCCAGGCCCCGTCCAGCACCTCCACTTCCA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACTGGTTGCCAGGAACTaGGCTGCATCATACGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLVARN*AASYAS
Trigger: TGAGGCGTATGATGCAGCTCAGTTCCTGGCAACCAG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGGGGGGACATTGTTATTaGTCACTGAGAGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLGGHCY*SLRALS
Trigger: AGACAGGGCTCTCAGTGATCAATAACAATGTCCCCC...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGGCTCAAGGACTGAGTaGGGTCTTCCTGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYGSRTE*GLPAPL
Trigger: AAGTGGAGCAGGAAGACCTCACTCAGTCCTTGAGCC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGCTCAAGGACTGAGTaGGGTCTTCCTGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGGSRTE*GLPAPL
Trigger: AAGTGGAGCAGGAAGACCTCACTCAGTCCTTGAGCC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCTGACTCTGTTCTCCTaGGATCTTGGCCGTCATCAC +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMELTLFS*DLGRHH
Trigger: GTGATGACGGCCAAGATCTCAGGAGAACAGAGTCAG...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTACAGGCTCACAGGCGTTaGCCCTTCCTTGTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLQAHRR*PFLVVD
Trigger: ATCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTG...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCTGTCTTGATGAGATaGAGACCCGGAGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLAVLMR*RPGVHG
Trigger: GCCATGGACTCCGGGTCTGCATCTCATCAAGACAGC...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGATGGAAGACCTTCTCTaGCCTTCACTCCACAGTCGG +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEMEDLL*PSLHSR
Trigger: CCGACTGTGGAGTGAAGGGCAGAGAAGGTCTTCCAT...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAACTGATTACAATGGAGTaGCTCAGACGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQLITME*LRRTWQ
Trigger: CTGCCAGGTGCGTCTGAGGCACTCCATTGTAATCAG...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGAAGCCTGTGCCACTTaGTTCATGTCAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGEACAT*FMSAWG
Trigger: CCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACGGGATGGAAGCCTGTaGCACTTGCTTCATGTCAGC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGRDGSL*HLLHVS
Trigger: GCTGACATGAAGCAAGTGGCACAGGCTTCCATCCCG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCGGGATGGAAGCCTGTaGCACTTGCTTCATGTCAGC +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDRDGSL*HLLHVS
Trigger: GCTGACATGAAGCAAGTGGCACAGGCTTCCATCCCG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTTCTGCATCACTGGCTaGGTTCTTCCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDFCITG*VLPRSP
Trigger: TGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATTTCTGCATCACTGGCTaGGTTCTTCCCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYFCITG*VLPRSP
Trigger: TGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAA...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACTTCTGGGCAGAGGGTaGTGCAAAGTTCTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLLGRG*CKVLAC
Trigger: GCACGCAAGAACTTTGCACCACCCTCTGCCCAGAAG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAAGCTTGTGGGTCTTCTaGGCAGAGGGTGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLSLWVF*AEGGAK
Trigger: CTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGACTGTGTCAGCTTGTaGGTCTTCTGGGCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYDCVSL*VFWAEG
Trigger: ACCCTCTGCCCAGAAGACCCACAAGCTGACACAGTC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTACCCCCACAGATTTCTaGGTATTTTTCACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVTPTDF*VFFTVS
Trigger: TGACACTGTGAAAAATACCCAGAAATCTGTGGGGGT...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGAGCAGAGGATGGAGGTaGGTCAGTGGCCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLSRGWR*VSGPVS
Trigger: GGAGACGGGGCCACTGACCCACCTCCATCCTCTGCT...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTCTCGGTTGATCGCCTaGGTCCCCGGGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCSRLIA*VPGPCF
Trigger: GAAGCAAGGCCCGGGGACCCAGGCGATCAACCGAGA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTGTCCATTTCATCACTaGGTGAGTGAAAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGACPFHH*VSERGQ
Trigger: CTGACCTCTTTCACTCACCCAGTGATGAAATGGACA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATTGGCACTGGTACTGTaGAAGGGCCGTGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLALVL*KGRELS
Trigger: GGACAGTTCACGGCCCTTCCACAGTACCAGTGCCAA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATAAAGGCTTCATGCACTaGCTGCAGCTGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYKGFMH*LQLMGP
Trigger: GGGTCCCATCAGCTGCAGCCAGTGCATGAAGCCTTT...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGAGGGAGACACTCTGCTaGGACCGTCTGTTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLRETLC*DRLLVN
Trigger: GTTTACTAACAGACGGTCCCAGCAGAGTGTCTCCCT...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAATGGAAGTGGAGGTGCTaGACGGGGCCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQWKWRC*TGPGSA
Trigger: GGCAGAGCCAGGCCCCGTCCAGCACCTCCACTTCCA...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTCGAGAGCAGAAGGCTaGTTACAATGGAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMESRAEG*LQWSAS
Trigger: TGAGGCACTCCATTGTAATCAGCCTTCTGCTCTCGA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACACTGGCTGTGGATACTaGTCAGCTCATCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDTGCGY*SAHPSR
Trigger: CCTGCTTGGATGAGCTGATCAGTATCCACAGCCAGT...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGCTTCTCCTGCTCAATaGGAGAGCTGGGGCGAGATG +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLASPAQ*ESWGEM
Trigger: CATCTCGCCCCAGCTCTCTCATTGAGCAGGAGAAGC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCTTCAGGTGTCTGAATaGCAGTGCCACCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMELQVSE*QCHLLI
Trigger: GATGAGAAGGTGGCACTGGCATTCAGACACCTGAAG...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGGAATCTGGCTCCCCTaGATTTTCCTCAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEGIWLP*IFLSQK
Trigger: CTTCTGACTGAGGAAAATGCAGGGGAGCCAGATTCC...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACACTCTCTGGACTGCTTaGCAGAGAGAAACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDTLWTA*QRETAG
Trigger: GCCAGCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGT...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTTGGAGGCCCTGACTTaGCTGATGACGGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLLEALT*LMTAST
Trigger: AGTGGAGGCCGTCATCAGGCAAGTCAGGGCCTCCAA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTCTGGCATTTTGCCTTaGTTACCTGGTGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLSGILP*LPGADS
Trigger: TGAGTCAGCACCAGGTAAGCAAGGCAAAATGCCAGA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166315.7
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACAAAAGCACCACAGCCTaGACACGTGTAGGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDKSTTA*TRVGVL
Trigger: AAGGACGCCTACACGTGTGCAGGCTGTGGTGCTTTT...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGAGTTACAAGTAAAATaGACTCTGGAATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAELQVK*TLEFPA
Trigger: GGCTGGGAATTCCAGAGTGCATTTTACTTGTAACTC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGAGCACTCTCGGGCTGTaGGTTGGGGAGCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQSTLGL*VGEQSS
Trigger: AGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCT...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGCAGGAAGGCCCTCTCTaGAAGCACAGAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQQEGPL*KHRAAP
Trigger: AGGTGCTGCTCTGTGCTTCCAGAGAGGGCCTTCCTG...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCTGATTTCCAGCACTaGTTGCCAGGAACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLADFQH*LPGTEL
Trigger: CAGCTCAGTTCCTGGCAACCAGTGCTGGAAATCAGC...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGCTGATTTCCAGCACTaGTTGCCAGGAACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYADFQH*LPGTEL
Trigger: CAGCTCAGTTCCTGGCAACCAGTGCTGGAAATCAGC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTCAAAAGGAGGATGCTaGTGGTCAGAAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMESKGGC*WSEGSG
Trigger: ACCAGAGCCTTCTGACCACCAGCATCCTCCTTTTGA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGTCCATGGCAGATGCTaGCTCCGCCTCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANVHGRC*LRLFPL
Trigger: AAGGGGGAAGAGGCGGAGCCAGCATCTGCCATGGAC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTGCTGGCATGCATCTaGTTCTGTGACCATGGCATC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGVLACI*FCDHGI
Trigger: GATGCCATGGTCACAGAACCAGATGCATGCCAGCAC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTAAAGTGCGTCATCTTTaGTTACTGATTCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVKVRHL*LLIHSL
Trigger: CAGAGAGTGAATCAGTAACCAAAGATGACGCACTTT...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAAGACAGACTCGTTCTTaGTGGCACCAGGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLRQTRS*WHQALC
Trigger: GCAAAGAGCCTGGTGCCACCAAGAACGAGTCTGTCT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTACTCTCGGTCAGGTTaGCACTGGTACTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDYSRSG*HWYCGR
Trigger: CCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAAGCGATGATGTATCGTaGGCCTGGAGGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLSDDVS*AWRLPF
Trigger: AAAAGGGAGCCTCCAGGCCCACGATACATCATCGCT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTATCTCTGGAGCTTGCATaGACCTCCACCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLSLELA*TSTISG
Trigger: TCCAGAGATGGTGGAGGTCCATGCAAGCTCCAGAGA...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGCTCTTCACCCTCTGCTaGTACTTCCGAAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQLFTLC*YFRSRA
Trigger: GGCCCTGCTTCGGAAGTACCAGCAGAGGGTGAAGAG...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAATGGGGTTCACGATGTaGCTCGGATTCAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQMGFTM*LGFRSQ
Trigger: TTGACTTCTGAATCCGAGTCACATCGTGAACCCCAT...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTAGTTGTGCTACTGTCTaGATTCTCAAGTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGASCATV*ILKSFL
Trigger: AAGGAAAGACTTGAGAATTCAGACAGTAGCACAACT...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATCACAGTGTCAGAAGTaGCTGTGTCAGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGSQCQK*LCQLVG
Trigger: ACCCACAAGCTGACACAGTCACTTCTGACACTGTGA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTATCACAGTGTCAGAAGTaGCTGTGTCAGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLSQCQK*LCQLVG
Trigger: ACCCACAAGCTGACACAGTCACTTCTGACACTGTGA...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAACAGGCTTTGGGAAGATaGTGCTGTCCATTTCATCAC +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQQALGR*CCPFHH
Trigger: GTGATGAAATGGACAGCATCATCTTCCCAAAGCCTG...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACGCGCTCCTTGGGCTGTaGAGACTTGTTTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDALLGL*RLVSHD
Trigger: ATCATGAGAAACAAGTCTTCACAGCCCAAGGAGCGC...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGGCTGTCTTGATGAGATaGAGACCCGGAGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQAVLMR*RPGVHG
Trigger: GCCATGGACTCCGGGTCTGCATCTCATCAAGACAGC...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTCCCTTCCAGAAGAGTaGTGGCATGCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDSLPEE*WHASGS
Trigger: AGAACCAGATGCATGCCAGCACTCTTCTGGAAGGGA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATTGCCAGAGAGAAACTaGTGGCTGGAGGTGATACCT +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLPERN*WLEVIP
Trigger: AGGTATCACCTCCAGCCAGCAGTTTCTCTCTGGCAA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCCTGTTCTCCACCAATaGCTACAGGGCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDPVLHQ*LQGWYF
Trigger: GAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCAGGCAGAGGGTGTGTaGTGCTGTGCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLQAEGV*CCAFSS
Trigger: CGAGGAGAAAGCACAGCAGCACACACCCTCTGCCTG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAATGCGTCTTCTCTATCTaGGGGGTCTCCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQCVFSI*GVSPGR
Trigger: CCTGCCTGGGGAGACCCCGCAGATAGAGAAGACGCA...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATCCGCTGGTTCATTTCTaGATCACTGGCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYPLVHF*ITGCVL
Trigger: AAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGG...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTTTTCCACCATCTGCTaGTCAAAGAGCAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLFSTIC*SKSRSV
Trigger: GACAGATCTGCTCTTTGAGCAGCAGATGGTGGAAAA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGCTCCTCTCTGGAGCTTaGATGGACCTCCACCATCTC +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLLLSGA*MDLHHL
Trigger: GAGATGGTGGAGGTCCATGCAAGCTCCAGAGAGGAG...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCAGCACTCTCGGGCTGTaGGTTGGGGAGCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCSTLGL*VGEQSS
Trigger: AGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCT...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTCCAGGTGCTGTGCTTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCSRCCA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAAGCACAGCACCTGGA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGTCCAGGTGCTGTGCTTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLSRCCA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAAGCACAGCACCTGGA...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAAGGGCAGCCGAGTACTaGACACCAGAGGGACACCAG +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQRAAEY*TPEGHQ
Trigger: CTGGTGTCCCTCTGGTGTGCAGTACTCGGCTGCCCT...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGCCCCTTCCTTGTTGTaGATGCTGAGAGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMAPSLL*MLRAPR
Trigger: CCGTGGAGCTCTCAGCATCCACAACAAGGAAGGGGC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTCTGTTTCCACAGGATaGAAGACCTTCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMESVSTG*KTFSAL
Trigger: AAGGGCAGAGAAGGTCTTCCATCCTGTGGAAACAGA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGAAGTTCTTGCGTGCTTaGCTGCACCATTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEKFLRA*LHHCAF
Trigger: GAAAGCACAATGGTGCAGCCAAGCACGCAAGAACTT...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCACCACACTGCCCGGTaGTGTCTTCGTGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMHHTAR*CLRASS
Trigger: AGAAGACGCACGAAGACACCACCGGGCAGTGTGGTG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCTTCATCTTGGGTGTaGCAGCTCCATTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLASSWV*QLHFLQ
Trigger: CTGTAGGAAATGGAGCTGCCACACCCAAGATGAAGC...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTGTCCATTTCATCACTaGGTGAGTGAAAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLCPFHH*VSERGQ
Trigger: CTGACCTCTTTCACTCACCCAGTGATGAAATGGACA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATTCTCTGCAGCCTTTGTaGACAAAAGCACCACAGCCT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYSLQPL*TKAPQP
Trigger: AGGCTGTGGTGCTTTTGTCCACAAAGGCTGCAGAGA...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGATGTATCGTGGGCCTaGAGGCTCCCTTTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMDVSWA*RLPFGC
Trigger: GCAGCCAAAAGGGAGCCTCCAGGCCCACGATACATC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTATCGGGAACTTTTGTCTaGCTGGCTGAGCCCAGTATA +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLSGTFV*LAEPSI
Trigger: TATACTGGGCTCAGCCAGCCAGACAAAAGTTCCCGA...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp ATGGAGCTGGAGGGCGAGGAGAGAGACAGGCAGCACTaGACAGCTTCAAGGGCAAGAGCGCAACCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: MELEGEERDRQH*TASRARAQPSK
Trigger: TTTGCTTGGTTGCGCTCTTGCCCTTGAAGCTGTCAAGTGCTGCCTGTCTCTCTCCTCGCCCTCCAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGAAGTTCAGAGCCTGCTaGTTTCCAGCACTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQKFRAC*FPALVA
Trigger: GGCAACCAGTGCTGGAAATCAGCAGGCTCTGAACTT...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGTAGTTCTATGGAGCTaGGGAGTTGCTGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYVVLWS*GVAVPF
Trigger: AAAGGGAACAGCAACTCCTCAGCTCCATAGAACTAC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGCGAGGCTTTCTGCTTTaGATCGGCAGACAGACTCGT +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLRGFLL*IGRQTR
Trigger: ACGAGTCTGTCTGCCGATTCAAAGCAGAAAGCCTCG...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACTTCCTGTAAGTCAGTaGCACCTTTGTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLPVSQ*HLCPGK
Trigger: CTTTCCTGGACAAAGGTGTCACTGACTTACAGGAAG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACCAGTCCAACATCTATaGAGCTTCTGCATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGPVQHL*SFCILS
Trigger: GCTCAGAATGCAGAAGCTTCATAGATGTTGGACTGG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATCAGGCTTTGGGAAGATaGTGCTGTCCATTTCATCAC +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYQALGR*CCPFHH
Trigger: GTGATGAAATGGACAGCATCATCTTCCCAAAGCCTG...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTGGCAGGCACTTCAGTaGTGCTGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMWQALQ*CCPSPP
Trigger: AGGAGGAGATGGACAGCATCACTGAAGTGCCTGCCA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATCTGAAACTTCTCCTATaGATGGGAGGTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYLKLLL*MGGLLT
Trigger: TGTCAGGAGACCTCCCATTCATAGGAGAAGTTTCAG...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166315.7
CDS-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAACCAGGCTCAAGGACTaGGTGAGGTCTTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQTRLKD*VRSSCS
Trigger: GGAGCAGGAAGACCTCACTCAGTCCTTGAGCCTGGT...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGATGGAAGACCTTCTCTaGCCTTCACTCCACAGTCGG +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLMEDLL*PSLHSR
Trigger: CCGACTGTGGAGTGAAGGGCAGAGAAGGTCTTCCAT...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTACAAGTCTTTCCTTTGTaGCTTCCCCTACTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLQVFPL*LPLLEA
Trigger: AGCCTCAAGTAGGGGAAGGCACAAAGGAAAGACTTG...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGCAGCACTTCAAGTGTTaGTGTTGGGCTGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQQHFKC*CWAGTL
Trigger: GAGGGTTCCAGCCCAACAGCAACACTTGAAGTGCTG...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCTATCTTTGCCATCTTaGCCCAGAGCTGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDLSLPS*PRAVEL
Trigger: AAGTTCCACAGCTCTGGGGCAAGATGGCAAAGATAG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAACAGGCAGAGGGTGTGTaGTGCTGTGCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQQAEGV*CCAFSS
Trigger: CGAGGAGAAAGCACAGCAGCACACACCCTCTGCCTG...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGGAAGCCTGTGCCACTTaGTTCATGTCAGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLEACAT*FMSAWG
Trigger: CCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTC...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGCTCCTCTATGGAGTCTaGTCTGGTAGGCACATCTGC +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQLLYGV*SGRHIC
Trigger: GCAGATGTGCCTACCAGAGCAGACTCCATAGAGGAG...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCTGCGTCTTCTCTATCTaGGGGGTCTCCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSACVFSI*GVSPGR
Trigger: CCTGCCTGGGGAGACCCCGCAGATAGAGAAGACGCA...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGAAGGGACACGTCACTaGCATGAGAAGAATGTCGAT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYEGTRH*HEKNVD
Trigger: ATCGACATTCTTCTCATGGCAGTGACGTGTCCCTTC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATTTTCTTCTCGTAACTTaGCACTTTGCTGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYFLLVT*HFAVHG
Trigger: GCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAA...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATCAGCCTTCCTGTTGTaGTCTTCAGAAACACACTCC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGSAFLL*SSETHS
Trigger: GGAGTGTGTTTCTGAAGAGCACAACAGGAAGGCTGA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTCAGCCTTCCTGTTGTaGTCTTCAGAAACACACTCC +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDSAFLL*SSETHS
Trigger: GGAGTGTGTTTCTGAAGAGCACAACAGGAAGGCTGA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCTCCTCTCTGGAGCTTaGATGGACCTCCACCATCTC +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANLLSGA*MDLHHL
Trigger: GAGATGGTGGAGGTCCATGCAAGCTCCAGAGAGGAG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACGTCACCAGGCTGGGTaGGGCTTCCTTTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQRHQAG*GFLCSS
Trigger: AGAAGAGCAAAGGAAGCCGCACCCAGCCTGGTGACG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGTCCATGGCAGATGCTaGCTCCGCCTCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCVHGRC*LRLFPL
Trigger: AAGGGGGAAGAGGCGGAGCCAGCATCTGCCATGGAC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAAGCTTGTGGGTCTTCTaGGCAGAGGGTGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRSLWVF*AEGGAK
Trigger: CTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCGTGTTGCTGTTGGGCTaGAACCCTCCTGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCVLLLG*NPPVLH
Trigger: GTGGAGAACAGGAGGGTTCCAGCCCAACAGCAACAC...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCAGACTCGTTCTTGGTaGCACCAGGCTCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLQTRSW*HQALCS
Trigger: GCTGCAAAGAGCCTGGTGCCACCAAGAACGAGTCTG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTCGGTCAGGTTGGCACTaGTACTGTGGAAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCRSGWH*YCGRAV
Trigger: CACGGCCCTTCCACAGTACCAGTGCCAACCTGACCG...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCTTTCTCACCTCCTTTaGAAGCATTCATCTGATGAC +
Preference number: 4 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLLSHLL*KHSSDD
Trigger: GTCATCAGATGAATGCTTCCAAAGGAGGTGAGAAAG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAAGAACTCATCCGAATTaGGCAAGAAGGATGGGATCC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGRTHPN*ARRMGS
Trigger: GGATCCCATCCTTCTTGCCCAATTCGGATGAGTTCT...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTACTTCATCTCCAGTTCTaGTGTCTGGCATTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLLHLQF*CLAFLV
Trigger: CACCAGAAATGCCAGACACCAGAACTGGAGATGAAG...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTCACCATTAATGGCATaGGATTGTCCATCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMESPLMA*DCPSAS
Trigger: TGAAGCAGATGGACAATCTCATGCCATTAATGGTGA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAATTCCTCAACCATGCTTaGCAAATCACAGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQFLNHA*QITGTF
Trigger: GAAAGTTCCTGTGATTTGTCAAGCATGGTTGAGGAA...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGTGCCTTCCCCTACTTaGGGCTTATTGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMVPSPT*GLLFWV
Trigger: CACCCAGAACAATAAGCCTCAAGTAGGGGAAGGCAC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGAGTCTGGGAGACAACTaGAGGCAGACGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSLGDN*RQTWNI
Trigger: GATGTTCCACGTCTGCCTTCAGTTGTCTCCCAGACT...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCCTGGAACCACTACACTaGCACCTTCTTCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCLEPLH*HLLQAE
Trigger: CTCTGCCTGAAGAAGGTGTCAGTGTAGTGGTTCCAG...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCGAGGCTTTCTGCTTTaGATCGGCAGACAGACTCGT +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLRGFLL*IGRQTR
Trigger: ACGAGTCTGTCTGCCGATTCAAAGCAGAAAGCCTCG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCGCTCCAGGATCCTCTaGAAGAACTGGCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANRSRIL*KNWLWI
Trigger: TATCCACAGCCAGTTCTTTCAGAGGATCCTGGAGCG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCGCTCCAGGATCCTCTaGAAGAACTGGCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLRSRIL*KNWLWI
Trigger: TATCCACAGCCAGTTCTTTCAGAGGATCCTGGAGCG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCTCTGCACTCTCACCTaGGAACTGACTGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLLCTLT*ELTDKH
Trigger: GTGCTTGTCAGTCAGTTCTCAGGTGAGAGTGCAGAG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCCACTCACCAAACTCTaGAGGATTTCCACTTCATTT +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEPLTKL*RISTSF
Trigger: AAATGAAGTGGAAATCCTTCAGAGTTTGGTGAGTGG...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGTTTCAGGCCGCTGTCTaGCTCTGTTCTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLFQAAV*LCSPEI
Trigger: GATCTCAGGAGAACAGAGTCAGACAGCGGCCTGAAA...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAAGGAGTTCGTGGAGGTaGACAATGCTCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRRSSWR*TMLWTT
Trigger: GGTTGTCCAGAGCATTGTTCACCTCCACGAACTCCT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGGTGACCATGGCATCCTaGAGCACACTGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKVTMAS*STLLLL
Trigger: CAGCAGGAGCAGTGTGCTGCAGGATGCCATGGTCAC...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCCAGCACTTCAAGTGTTaGTGTTGGGCTGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCQHFKC*CWAGTL
Trigger: GAGGGTTCCAGCCCAACAGCAACACTTGAAGTGCTG...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCAGAGGGTGTGTGCTaGTGTGCTTTCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCAEGVC*CAFSSA
Trigger: TGCCGAGGAGAAAGCACAGCAGCACACACCCTCTGC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCGCAGAGGGTGTGTGCTaGTGTGCTTTCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAAEGVC*CAFSSA
Trigger: TGCCGAGGAGAAAGCACAGCAGCACACACCCTCTGC...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCTCCTCTATGGAGTCTaGTCTGGTAGGCACATCTGC +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMLLYGV*SGRHIC
Trigger: GCAGATGTGCCTACCAGAGCAGACTCCATAGAGGAG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCAAAAGCACCACAGCCTaGACACGTGTAGGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCKSTTA*TRVGVL
Trigger: AAGGACGCCTACACGTGTGCAGGCTGTGGTGCTTTT...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAAGCTTTTCCACCATCTaGTGCTCAAAGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGSFSTI*CSKSRS
Trigger: AGATCTGCTCTTTGAGCAGCAGATGGTGGAAAAGCT...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCTGTCCACAGAACTTaGCGTATGTCTTCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGAVHRT*RMSSLS
Trigger: GCTTAAAGAAGACATACGGCAAGTTCTGTGGACAGC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCCCTCTGGCAAGGGAGTaGTGCACTCAGTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAPLARE*CTQSCP
Trigger: GGGACATGACTGAGTGCAGCACTCCCTTGCCAGAGG...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGTGTGCTTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKCACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAAGCACA...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAATCCCTCTCCAGGTCCTaGTGCCTGCGGCGGACCGTC +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNESLSRS*CLRRTV
Trigger: GACGGTCCGCCGCAGGCAGCAGGACCTGGAGAGGGA...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGGTCACACTGGTAAGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMGHTGK*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACTTACCAGTGTGACC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCCGTCACCAGGCTGGGTaGGGCTTCCTTTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSARHQAG*GFLCSS
Trigger: AGAAGAGCAAAGGAAGCCGCACCCAGCCTGGTGACG...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTCAAAAGGAGGATGCTaGTGGTCAGAAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLSKGGC*WSEGSG
Trigger: ACCAGAGCCTTCTGACCACCAGCATCCTCCTTTTGA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCTGGGTGGTAGCATCTaGGGTAAGCAGGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANLGGSI*GKQAMF
Trigger: GAACATAGCCTGCTTACCCCAGATGCTACCACCCAG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCTGGGTGGTAGCATCTaGGGTAAGCAGGCTATGTTC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLLGGSI*GKQAMF
Trigger: GAACATAGCCTGCTTACCCCAGATGCTACCACCCAG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAACCCCCACAGATTTCTaGGTATTTTTCACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQTPTDF*VFFTVS
Trigger: TGACACTGTGAAAAATACCCAGAAATCTGTGGGGGT...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACAGTTCTTTCTCAGTCTaGGAGACAACTGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDSSFSV*ETTEGR
Trigger: TCTGCCTTCAGTTGTCTCCCAGACTGAGAAAGAACT...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGCTGGAGGTGATACCTaGTCTGGCGCTAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANAGGDT*SGASSF
Trigger: GAAAGAACTAGCGCCAGACCAGGTATCACCTCCAGC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCCAGAGAGAAACTGCTaGCTGGAGGTGATACCTGGT +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLPERNC*LEVIPG
Trigger: ACCAGGTATCACCTCCAGCCAGCAGTTTCTCTCTGG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAAGTGTTGCTGTTGGGCTaGAACCCTCCTGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQVLLLG*NPPVLH
Trigger: GTGGAGAACAGGAGGGTTCCAGCCCAACAGCAACAC...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGCGATTGGGGTCTCTTTaGAGTTACTCGTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLRLGSL*SYSWHS
Trigger: ACTGTGCCACGAGTAACTCCAAAGAGACCCCAATCG...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGCGATTGGGGTCTCTTTaGAGTTACTCGTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQRLGSL*SYSWHS
Trigger: ACTGTGCCACGAGTAACTCCAAAGAGACCCCAATCG...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGCACCACACTGCCCGGTaGTGTCTTCGTGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKHHTAR*CLRASS
Trigger: AGAAGACGCACGAAGACACCACCGGGCAGTGTGGTG...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACTTCATCTCCAGTTCTaGTGTCTGGCATTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLHLQF*CLAFCL
Trigger: AAGGCAAAATGCCAGACACCAGAACTGGAGATGAAG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166315.7
CDS-3UTR CCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCTTGCTTCATCTTaGGTGTGGCAGCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRGLASS*VWQLHF
Trigger: GAAATGGAGCTGCCACACCCAAGATGAAGCAAGGCC...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGGCCTTGCTTCATCTTaGGTGTGGCAGCTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANGLASS*VWQLHF
Trigger: GAAATGGAGCTGCCACACCCAAGATGAAGCAAGGCC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGCAGGGCAGGGCTCTATaGCACACCAGCTTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKQGRAL*HTSFLG
Trigger: ACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTG...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGATTCTGAGCTCTGTTTaGAAGCTAAGAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEILSSV*KLREML
Trigger: CAGCATCTCTCTTAGCTTCCAAACAGAGCTCAGAAT...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACTCTTCTTCAGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLFFRL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCTGAAGAAGAG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATAAGCTGTGTCATCTGTaGAAGAACTGGATCCTGTTG +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYKLCHL*KNWILL
Trigger: CAACAGGATCCAGTTCTTCCACAGATGACACAGCTT...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGTCTCTGCAGCCTTTGTaGACAAAAGCACCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQSLQPL*TKAPQP
Trigger: AGGCTGTGGTGCTTTTGTCCACAAAGGCTGCAGAGA...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGAGCGATGATGTATCGTaGGCCTGGAGGCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSDDVS*AWRLPF
Trigger: AAAAGGGAGCCTCCAGGCCCACGATACATCATCGCT...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGAGGGAGACACTCTGCTaGGACCGTCTGTTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLRETLC*DRLLVN
Trigger: GTTTACTAACAGACGGTCCCAGCAGAGTGTCTCCCT...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGATATTCCGCTCCTCTCTaGAGCTTGCATGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRYSAPL*SLHGPP
Trigger: TGGAGGTCCATGCAAGCTCCAGAGAGGAGCGGAATA...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTCGGGAACTTTTGTCTaGCTGGCTGAGCCCAGTATA +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLSGTFV*LAEPSI
Trigger: TATACTGGGCTCAGCCAGCCAGACAAAAGTTCCCGA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCACCCAAAGAGTCGGGTaGAAGTGGAGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSATQRVG*KWRCWT
Trigger: CGTCCAGCACCTCCACTTCCACCCGACTCTTTGGGT...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTCTTTTCCTTTGGCTTaGATAACCCAAAGAGTCGGG +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDSFPLA*ITQRVG
Trigger: CCCGACTCTTTGGGTTATCCAAGCCAAAGGAAAAGA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACCAACGTATCAGAACTaGCTTTCCGGGTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRPTYQN*LSGYLC
Trigger: GCACAAGTACCCGGAAAGTCAGTTCTGATACGTTGG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGATCGAGGAACCGTGTaGAGTTCAGAGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQDRGTV*SSEPAD
Trigger: ATCAGCAGGCTCTGAACTTCACACGGTTCCTCGATC...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGAGAACTCAATGCAGGTaGAGCCTCAGCAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMRTQCR*SLSRSV
Trigger: AACACTCCTGCTGAGGCTTCACCTGCATTGAGTTCT...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTCCGTGCATGAGACTCTaGGTTCTGTTCTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCPCMRL*VLFWHP
Trigger: GGGATGCCAGAACAGAACTCAGAGTCTCATGCACGG...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAAAGTCTGGGAGACAACTaGAGGCAGACGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQSLGDN*RQTWNI
Trigger: GATGTTCCACGTCTGCCTTCAGTTGTCTCCCAGACT...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCGAATGGGAGGTCTCCTaGCAACATGCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAEWEVS*QHAQEL
Trigger: GAGCTCTTGGGCATGTTGTCAGGAGACCTCCCATTC...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCTGTCCAATCCAGGATaGCTGATTGTCATTAATGAG +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDLSNPG*LIVINE
Trigger: CTCATTAATGACAATCAGTCATCCTGGATTGGACAG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTACTTGGTGATCCTCTaGGTTACAAGTAAAATGCAC +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEYLVIL*VTSKMH
Trigger: GTGCATTTTACTTGTAACTCAGAGGATCACCAAGTA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAAAACTGGGTACTTGGTaGTCCTCTGAGTTACAAGTA +
Preference number: 4 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLKLGTW*SSELQV
Trigger: TACTTGTAACTCAGAGGATCACCAAGTACCCAGTTT...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAATTTCAGGCCGCTGTCTaGCTCTGTTCTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQFQAAV*LCSPEI
Trigger: GATCTCAGGAGAACAGAGTCAGACAGCGGCCTGAAA...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTCCCTTCCAGAAGAGTaGTGGCATGCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSLPEE*WHASGS
Trigger: AGAACCAGATGCATGCCAGCACTCTTCTGGAAGGGA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAACTCTCTGGACTGCTTaGCAGAGAGAAACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQTLWTA*QRETAG
Trigger: GCCAGCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGT...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCCTGTTCTCCACCAATaGCTACAGGGCTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMPVLHQ*LQGWYF
Trigger: GAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGACACTCTCTGGAGCATaGCTTCTTTTGAGGCACACT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQTLSGA*LLLRHT
Trigger: AGTGTGCCTCAAAAGAAGGCATGCTCCAGAGAGTGT...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGACACTCTCTGGAGCATaGCTTCTTTTGAGGCACACT +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLTLSGA*LLLRHT
Trigger: AGTGTGCCTCAAAAGAAGGCATGCTCCAGAGAGTGT...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACGTAACTTGCCACTTTaGTGTCCACGGCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRRNLPL*CPRLQS
Trigger: TGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACTCCGCTGCTTCTCCTaGTCAATGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSLRCFS*SMRELG
Trigger: CCCCAGCTCTCTCATTGAGCAGGAGAAGCAGCGGAG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAAGATCTCTTCACCCTCTaGTGGTACTTCCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQDLFTL*WYFRSR
Trigger: CCTGCTTCGGAAGTACCAGCAGAGGGTGAAGAGATC...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTTCAAGTGTTGCTGTTaGGCTGGAACCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCFKCCC*AGTLLF
Trigger: GAACAGGAGGGTTCCAGCCCAACAGCAACACTTGAA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCCTTGCCCCAGAGCTGTaGAACTTTCTGGAACCACTA +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCLAPEL*NFLEPL
Trigger: TAGTGGTTCCAGAAAGTTCCACAGCTCTGGGGCAAG...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATGCTTCATGTCAGCTTaGGGGACATTGTTATTGATC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGCFMSA*GTLLLI
Trigger: GATCAATAACAATGTCCCCCAAGCTGACATGAAGCA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGAGAAAGAGAACGCATaGAGCTCCTCAGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLEKENA*SSSEKS
Trigger: GCTCTTTTCTGAGGAGCTCCATGCGTTCTCTTTCTC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTTGGCACTGGTACTGTaGAAGGGCCGTGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCLALVL*KGRELS
Trigger: GGACAGTTCACGGCCCTTCCACAGTACCAGTGCCAA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATATCACTGTTGACTTATaGTCCAAGGATGCAAACACG +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYITVDL*SKDANT
Trigger: CGTGTTTGCATCCTTGGACCATAAGTCAACAGTGAT...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGAACTTTTGTCTGGCTaGCTGAGCCCAGTATATGGA +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLELLSG*LSPVYG
Trigger: TCCATATACTGGGCTCAGCCAGCCAGACAAAAGTTC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAGGGCCGTCACCAGGCTaGGTGCGGCTTCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNEGPSPG*VRLPLL
Trigger: GAGCAAAGGAAGCCGCACCCAGCCTGGTGACGGCCC...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp GAGGACTGTAGGCAAGCTCTGGCCTACGGGCCCAGGTaGTGTCCTTTACTAAGCCTGTGTGTACTGATGTTA +
Preference number: 4 (lower is better)
Translates to: EDCRQALAYGPR*CPLLSLCVLML
Trigger: TAACATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGCTTGCCTACAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGTGCCTTCCCCTACTTaGGGCTTATTGTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCVPSPT*GLLFWV
Trigger: CACCCAGAACAATAAGCCTCAAGTAGGGGAAGGCAC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGGTCATCTTTGGTTACTaGTTCACTCTCTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQVIFGY*FTLWTA
Trigger: AGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGAC...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGTAGTTCTATGGAGCTaGGGAGTTGCTGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRVVLWS*GVAVPF
Trigger: AAAGGGAACAGCAACTCCTCAGCTCCATAGAACTAC...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGACTTGGCAACAGAGATaGGCCGCTCTGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKTWQQR*AALLCT
Trigger: AGTACAGAGCAGAGCGGCTCATCTCTGTTGCCAAGT...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCTTCCTGTAAGTCAGTaGCACCTTTGTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMLPVSQ*HLCPGK
Trigger: CTTTCCTGGACAAAGGTGTCACTGACTTACAGGAAG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAAGGGGGACATTGTTATTaGTCACTGAGAGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQGGHCY*SLRALS
Trigger: AGACAGGGCTCTCAGTGATCAATAACAATGTCCCCC...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAATCTGCAGCTTGGGTTaGGACAGTAGTGGCATTACT +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRICSLG*DSSGIT
Trigger: AGTAATGCCACTACTGTCTCAACCCAAGCTGCAGAT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCCAGTCCAACATCTATaGAGCTTCTGCATTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLPVQHL*SFCILS
Trigger: GCTCAGAATGCAGAAGCTTCATAGATGTTGGACTGG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCGACACGTCACTGCCATaGGAAGAATGTCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSADTSLP*EECRSR
Trigger: CCTGGATCGACATTCTTCTCATGGCAGTGACGTGTC...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCATGGCAGGCACTTCAGTaGTGCTGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSWQALQ*CCPSPP
Trigger: AGGAGGAGATGGACAGCATCACTGAAGTGCCTGCCA...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGAATGGGAGGTCTCCTaGCAACATGCCCAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSEWEVS*QHAQEL
Trigger: GAGCTCTTGGGCATGTTGTCAGGAGACCTCCCATTC...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTTGGCTGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANLAASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCAA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGTGAGTAGAACTGCTTaGACCTCTTTCAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMVSRTA*TSFSLP
Trigger: AGGAAGGCTGAAAGAGGTTCAAGCAGTTCTACTCAC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTAGGAGTTCGTGGAGGTaGACAATGCTCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCRSSWR*TMLWTT
Trigger: GGTTGTCCAGAGCATTGTTCACCTCCACGAACTCCT...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGTTTCATAGGATAAGCTaGTCCAGGAATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLFHRIS*SRNLAP
Trigger: GGGAGCCAGATTCCTGGAGCAGCTTATCCTATGAAA...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGATCTTCAAAAGGAGGATaGTGGTGGTCAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRSSKGG*WWSEGS
Trigger: AGAGCCTTCTGACCACCAGCATCCTCCTTTTGAAGA...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTCTTCAAAAGGAGGATaGTGGTGGTCAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSSKGG*WWSEGS
Trigger: AGAGCCTTCTGACCACCAGCATCCTCCTTTTGAAGA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGATTCACTCTCTGGACTaGTTGCCAGAGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMIHSLD*LPERNC
Trigger: GCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAAT...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTCATTGCTCTATCTTTaGCATCTTGCCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANSLLYL*HLAPEL
Trigger: CAGCTCTGGGGCAAGATGGCAAAGATAGAGCAATGA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAAGTCCTGGTATCTCCTaGCCAGAGGGAGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSSPGIS*PEGGVL
Trigger: GAGAACACCTCCCTCTGGGCAGGAGATACCAGGACT...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGGTCTCCTGACAACATaGCCAAGAGCTCGCATTGAA +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQGLLTT*PRARIE
Trigger: TTCAATGCGAGCTCTTGGGCATGTTGTCAGGAGACC...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACGTAACTTGCCACTTTaGTGTCCACGGCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQRNLPL*CPRLQS
Trigger: TGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATTTCCACTTCATTTATTaGACTTTTCATCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYFHFIY*TFHQRS
Trigger: GGACCGCTGATGAAAAGTGCAATAAATGAAGTGGAA...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAATCCTCCAAAGGTCTCTaGTCTCCGGGGCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQSSKGL*SPGQRN
Trigger: ATTTCTTTGCCCCGGAGAGCAGAGACCTTTGGAGGA...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGCGTGGAGGTGAACAATaGTCTGGACAACCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKRGGEQ*SGQPAH
Trigger: GTGAGCAGGTTGTCCAGAGCATTGTTCACCTCCACG...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTTCCTCCAGGTGCTGTaGTTGCTGCTTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCFLQVL*LLLLQV
Trigger: AACCTGCAGAAGCAGCAAGCACAGCACCTGGAGGAA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGGGATCCGCATCAGCCTaGCATGTTTATTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQGSASA*HVYLKP
Trigger: AGGTTTCAAATAAACATGGCAGGCTGATGCGGATCC...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGTCTGTTTCCACAGGATaGAAGACCTTCTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLSVSTG*KTFSAL
Trigger: AAGGGCAGAGAAGGTCTTCCATCCTGTGGAAACAGA...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGGTGCTGGCATGCATCTaGTTCTGTGACCATGGCATC +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKVLACI*FCDHGI
Trigger: GATGCCATGGTCACAGAACCAGATGCATGCCAGCAC...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAATATCGGCTTTCTCCATaGGTTCACTTAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQYRLSP*VHLKLE
Trigger: TTCAAGTTTTAAGTGAACCCATGGAGAAAGCCGATA...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTATCGGCTTTCTCCATaGGTTCACTTAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEYRLSP*VHLKLE
Trigger: TTCAAGTTTTAAGTGAACCCATGGAGAAAGCCGATA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACAGACTCGTTCTTGGTaGCACCAGGCTCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSQTRSW*HQALCS
Trigger: GCTGCAAAGAGCCTGGTGCCACCAAGAACGAGTCTG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATCATCTGTGGAAGAACTaGATCCTGTTGTATCACAAA +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYHLWKN*ILLYHK
Trigger: TTTGTGATACAACAGGATCCAGTTCTTCCACAGATG...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCCGCATTGAACTCCGCTaGTTCATTTCTGCATCACTG +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCRIELR*FISASL
Trigger: CAGTGATGCAGAAATGAACCAGCGGAGTTCAATGCG...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGAGGCCTTTCTCCTCATaGGCCACTTCTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLRPFSS*ATSLTI
Trigger: GATTGTAAGAGAAGTGGCCCATGAGGAGAAAGGCCT...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAAGACCTCCACCATCTCTaGATCTTTCACCCCCATACT +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQDLHHL*IFHPHT
Trigger: AGTATGGGGGTGAAAGATCCAGAGATGGTGGAGGTC...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCGCTGAGCCCAGTATATaGAAAGGCCCCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCAEPSI*KGPLSF
Trigger: GAAAGATAAGGGGCCTTTCCATATACTGGGCTCAGC...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGATCGAGGAACCGTGTaGAGTTCAGAGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSDRGTV*SSEPAD
Trigger: ATCAGCAGGCTCTGAACTTCACACGGTTCCTCGATC...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAATGGGGTTCACGATGTaGCTCGGATTCAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQMGFTM*LGFRSQ
Trigger: TTGACTTCTGAATCCGAGTCACATCGTGAACCCCAT...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACTCTTATGAGAACAGATaGCATTTTCTTCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDSYENR*HFLPQP
Trigger: TGGTTGAGGAAGAAAATGTCATCTGTTCTCATAAGA...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATTGATTCTTTGCATCTaGAACACAGAGATGACAAAC +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGLILCI*NTEMTN
Trigger: GTTTGTCATCTCTGTGTTTCAGATGCAAAGAATCAA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGGTCATCTTTGGTTACTaGTTCACTCTCTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLVIFGY*FTLWTA
Trigger: AGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGAC...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACTGGAACCACTACACTaGCACCTTCTTCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSLEPLH*HLLQAE
Trigger: CTCTGCCTGAAGAAGGTGTCAGTGTAGTGGTTCCAG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAACTTGGCAACAGAGATaGGCCGCTCTGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSTWQQR*AALLCT
Trigger: AGTACAGAGCAGAGCGGCTCATCTCTGTTGCCAAGT...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGACACGTCACTGCCATaGGAAGAATGTCGATCCAGG +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSDTSLP*EECRSR
Trigger: CCTGGATCGACATTCTTCTCATGGCAGTGACGTGTC...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGAGTAAGGGATTCTGTTaGCTCATTGACCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQSKGFC*LIDLAD
Trigger: ATCTGCAAGGTCAATGAGTCAACAGAATCCCTTACT...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACTCTGCACTCTCACCTaGGAACTGACTGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSLCTLT*ELTDKH
Trigger: GTGCTTGTCAGTCAGTTCTCAGGTGAGAGTGCAGAG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACAAACTAAAATGTCAGTaGGTAGAACTGCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDKLKCQ*VELLEP
Trigger: AGGTTCAAGCAGTTCTACTCACTGACATTTTAGTTT...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACCTGCCATGTTTATTTaGAACCTGGCAAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRPAMFI*NLAKVL
Trigger: CAGAACCTTTGCCAGGTTTCAAATAAACATGGCAGG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGGTGACCATGGCATCCTaGAGCACACTGCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQVTMAS*STLLLL
Trigger: CAGCAGGAGCAGTGTGCTGCAGGATGCCATGGTCAC...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACAAGTCTTTCCTTTGTaGCTTCCCCTACTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQQVFPL*LPLLEA
Trigger: AGCCTCAAGTAGGGGAAGGCACAAAGGAAAGACTTG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACAGTTGTTTCAGTTGTaGTACTGTCTGAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGQLFQL*YCLNSQ
Trigger: TTGAGAATTCAGACAGTAGCACAACTGAAACAACTG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAATTCACTCTCTGGACTaGTTGCCAGAGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQIHSLD*LPERNC
Trigger: GCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAAT...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTACTTTAGCCATCAGTaGGTTGGAGGCCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCYFSHQ*VGGPDL
Trigger: CAAGTCAGGGCCTCCAACGCACTGATGGCTAAAGTA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCTGGTGTCTGGCATTTTaGCTTGCTTACCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAWCLAF*LAYLVL
Trigger: CAGCACCAGGTAAGCAAGGCAAAATGCCAGACACCA...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166315.7
CDS-3UTR GCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCCCGCTGGTTCATTTCTaGATCACTGGCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAPLVHF*ITGCVL
Trigger: AAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGG...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCGGTCTCCTGACAACATaGCCAAGAGCTCGCATTGAA +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAGLLTT*PRARIE
Trigger: TTCAATGCGAGCTCTTGGGCATGTTGTCAGGAGACC...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATAGGCTCCCTTTTGGCTaGTTCATTTTGACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANRLPFG*FILTFA
Trigger: TGCAAAGGTCAAAATGAAGCAGCCAAAAGGGAGCCT...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTTTTCCACCATCTGCTaGTCAAAGAGCAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCFSTIC*SKSRSV
Trigger: GACAGATCTGCTCTTTGAGCAGCAGATGGTGGAAAA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGAGCTTTTCCACCATCTaGTGCTCAAAGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSFSTI*CSKSRS
Trigger: AGATCTGCTCTTTGAGCAGCAGATGGTGGAAAAGCT...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTTGACAGACTGGTTGTaGTGTCCACAGAACTTGCCG +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCLTDWL*CPQNLP
Trigger: CGGCAAGTTCTGTGGACAGCACAACCAGTCTGTCAA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTTCTTACTACTGAACTaGTCATCTTCTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: PAHASWGRPQACTEQRMEFLLLN*SSSSSQ
Trigger: TTGTGAAGAAGAAGATGAGCAGTTCAGTAGTAAGAA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGTCCTCCAAAGGTCTCTaGTCTCCGGGGCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKSSKGL*SPGQRN
Trigger: ATTTCTTTGCCCCGGAGAGCAGAGACCTTTGGAGGA...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGGATCCGCATCAGCCTaGCATGTTTATTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANGSASA*HVYLKP
Trigger: AGGTTTCAAATAAACATGGCAGGCTGATGCGGATCC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTCATCCTGGACGAAATaGAAGTCTTCTTCAGCGACT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSSWTK*KSSSAT
Trigger: AGTCGCTGAAGAAGACTTCCATTTCGTCCAGGATGA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTCATCCTGGACGAAATaGAAGTCTTCTTCAGCGACT +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANSSWTK*KSSSAT
Trigger: AGTCGCTGAAGAAGACTTCCATTTCGTCCAGGATGA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGATCATACGCCTCATCCTaGACGAAATGGAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRSYASS*TKWKSS
Trigger: AGAAGACTTCCATTTCGTCCAGGATGAGGCGTATGA...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGTTCAAGTGTTGCTGTTaGGCTGGAACCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKFKCCC*AGTLLF
Trigger: GAACAGGAGGGTTCCAGCCCAACAGCAACACTTGAA...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAAAGCTGTGGAACTTTCTaGAACCACTACACTGACACC +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQSCGTF*NHYTDT
Trigger: GGTGTCAGTGTAGTGGTTCCAGAAAGTTCCACAGCT...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGGCTTCATCTTGGGTGTaGCAGCTCCATTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKASSWV*QLHFLQ
Trigger: CTGTAGGAAATGGAGCTGCCACACCCAAGATGAAGC...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCAAGCTGTGTCATCTGTaGAAGAACTGGATCCTGTTG +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCKLCHL*KNWILL
Trigger: CAACAGGATCCAGTTCTTCCACAGATGACACAGCTT...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTCATTTCTGCATCACTaGCTGCGTTCTTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCSFLHH*LRSSQV
Trigger: GACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACATTGCAGTATCCTTTaGAATAAAACTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: SCTRELGKASSMHRATHGHCSIL*NKTGYL
Trigger: CAAGTACCCAGTTTTATTCCAAAGGATACTGCAATG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATCCACTTCATTGTCTTTaGTACATTGCAGTATCCTTT +
Preference number: 4 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYPLHCL*YIAVSF
Trigger: AAAGGATACTGCAATGTACCAAAGACAATGAAGTGG...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAAGGCCTTTCTCCTCATaGGCCACTTCTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQRPFSS*ATSLTI
Trigger: GATTGTAAGAGAAGTGGCCCATGAGGAGAAAGGCCT...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACCAATGAGCCTGATTTaGTTACAGAAGGTGCAGACG +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQPMSLI*LQKVQT
Trigger: CGTCTGCACCTTCTGTAACCAAATCAGGCTCATTGG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp GTCTTCTGGGTACGTATCAAAGGCAACTTAAGAGCCTaGGCAAGAACAGTGGGTGAGGTGACAAGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VFWVRIKGNLRA*ARTVGEVTRAS
Trigger: CGAGGCTCTTGTCACCTCACCCACTGTTCTTGCCAAGGCTCTTAAGTTGCCTTTGATACGTACCCAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGTTCTGGCATCCCATCTaGACTTGGGCCTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQFWHPI*TWAWHG
Trigger: ACCATGCCAGGCCCAAGTTCAGATGGGATGCCAGAA...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCCGTGCATGAGACTCTaGGTTCTGTTCTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQPCMRL*VLFWHP
Trigger: GGGATGCCAGAACAGAACTCAGAGTCTCATGCACGG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGATCTGCAGCTTGGGTTaGGACAGTAGTGGCATTACT +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKICSLG*DSSGIT
Trigger: AGTAATGCCACTACTGTCTCAACCCAAGCTGCAGAT...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACCAATCCAGGATGACTaGTTGTCATTAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRPIQDD*LSLMRW
Trigger: CCATCTCATTAATGACAATCAGTCATCCTGGATTGG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCTTGGCTGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSALAASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCAA...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGAGTAAGGGATTCTGTTaGCTCATTGACCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLSKGFC*LIDLAD
Trigger: ATCTGCAAGGTCAATGAGTCAACAGAATCCCTTACT...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACAGCCTTCTTACTACTaGACTGCTCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRQPSYY*TAHLLL
Trigger: AAGAAGAAGATGAGCAGTTCAGTAGTAAGAAGGCTG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTACTTGGTGATCCTCTaGGTTACAAGTAAAATGCAC +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLYLVIL*VTSKMH
Trigger: GTGCATTTTACTTGTAACTCAGAGGATCACCAAGTA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGAAACTGGGTACTTGGTaGTCCTCTGAGTTACAAGTA +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMKLGTW*SSELQV
Trigger: TACTTGTAACTCAGAGGATCACCAAGTACCCAGTTT...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCACTCTTCATTCTCATaGTCGACTTGCTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANHSSFS*STCYLS
Trigger: AGACAGATAGCAAGTCGATCATGAGAATGAAGAGTG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCACTCTTCATTCTCATaGTCGACTTGCTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMHSSFS*STCYLS
Trigger: AGACAGATAGCAAGTCGATCATGAGAATGAAGAGTG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCGTGAGTAGAACTGCTTaGACCTCTTTCAGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAVSRTA*TSFSLP
Trigger: AGGAAGGCTGAAAGAGGTTCAAGCAGTTCTACTCAC...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAACCTGCCATGTTTATTTaGAACCTGGCAAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQPAMFI*NLAKVL
Trigger: CAGAACCTTTGCCAGGTTTCAAATAAACATGGCAGG...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTTTCATAGGATAAGCTaGTCCAGGAATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCFHRIS*SRNLAP
Trigger: GGGAGCCAGATTCCTGGAGCAGCTTATCCTATGAAA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGCTTTATCCACGTTATaGAGTAAAGAGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRALSTL*SKESLS
Trigger: GCTGAGTGACTCTTTACTGCATAACGTGGATAAAGC...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGTATCACAAAGTAACTaGTCTTCTTCAGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANVSQSN*SSSGFG
Trigger: CCCAAAGCCTGAAGAAGAGCAGTTACTTTGTGATAC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAAGGCTAGATTTTCTCTaGAGCCTTTGTGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRRLDFL*SLCGQK
Trigger: CTTTTGTCCACAAAGGCTGCAGAGAAAATCTAGCCT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAACTCCGCTGCTTCTCCTaGTCAATGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNELRCFS*SMRELG
Trigger: CCCCAGCTCTCTCATTGAGCAGGAGAAGCAGCGGAG...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGGCTGCTCCAGGAATCTaGCTCCCCTGCATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQAAPGI*LPCIFL
Trigger: GAGGAAAATGCAGGGGAGCCAGATTCCTGGAGCAGC...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCCTGGTGGCAAAGACATaGTTTGTAATATCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCLVAKT*FVISAF
Trigger: GAAAGCCGATATTACAAACCATGTCTTTGCCACCAG...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTGCTTCATGTCAGCTTaGGGGACATTGTTATTGATC +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCCFMSA*GTLLLI
Trigger: GATCAATAACAATGTCCCCCAAGCTGACATGAAGCA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCATTCTGAGCTCTGTTTaGAAGCTAAGAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCILSSV*KLREML
Trigger: CAGCATCTCTCTTAGCTTCCAAACAGAGCTCAGAAT...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAACTCTTCTTCAGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQLFFRL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCTGAAGAAGAG...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACTTTCTCACCTCCTTTaGAAGCATTCATCTGATGAC +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRLSHLL*KHSSDD
Trigger: GTCATCAGATGAATGCTTCCAAAGGAGGTGAGAAAG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCTGAGCCCAGTATATaGAAAGGCCCCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCAEPSI*KGPLSF
Trigger: GAAAGATAAGGGGCCTTTCCATATACTGGGCTCAGC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp GGAGTGAGGAGATACAGACAGTGCAGACCATGGTTTTaGGTACACATGAGGCCTCTTGCTGGTCTCACAAAC +
Preference number: 4 (lower is better)
Translates to: GVRRYRQCRPWF*VHMRPLAGLTN
Trigger: GTTTGTGAGACCAGCAAGAGGCCTCATGTGTACCAAAAACCATGGTCTGCACTGTCTGTATCTCCTCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGAGTTGTGCTACTGTCTaGATTCTCAAGTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SEALLGSMYLRGYITKGLSCATV*ILKSFL
Trigger: AAGGAAAGACTTGAGAATTCAGACAGTAGCACAACT...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACTGTCCAATCCAGGATaGCTGATTGTCATTAATGAG +
Preference number: 4 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQLSNPG*LIVINE
Trigger: CTCATTAATGACAATCAGTCATCCTGGATTGGACAG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCCATTGCCAACTCCAGTaGTGTTTTGTATGGAGACAC +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAHCQLQ*CFVWRH
Trigger: GTGTCTCCATACAAAACATCACTGGAGTTGGCAATG...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGAATGAGTCTGTTGAATaGGATAGAAATTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EASRVLRHRFCACCRGPLNESVE*DRNFQV
Trigger: CACCTGGAAATTTCTATCTCATTCAACAGACTCATT...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGACTGGCTGTGGATACTaGTCAGCTCATCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQTGCGY*SAHPSR
Trigger: CCTGCTTGGATGAGCTGATCAGTATCCACAGCCAGT...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGAAGGGACACGTCACTaGCATGAGAAGAATGTCGAT +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSEGTRH*HEKNVD
Trigger: ATCGACATTCTTCTCATGGCAGTGACGTGTCCCTTC...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCTGTCCACAGAACTTaGCGTATGTCTTCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCAVHRT*RMSSLS
Trigger: GCTTAAAGAAGACATACGGCAAGTTCTGTGGACAGC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGAGTTACAAGTAAAATaGACTCTGGAATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQELQVK*TLEFPA
Trigger: GGCTGGGAATTCCAGAGTGCATTTTACTTGTAACTC...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTTCCACTTCATTTATTaGACTTTTCATCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANFHFIY*TFHQRS
Trigger: GGACCGCTGATGAAAAGTGCAATAAATGAAGTGGAA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTTCCTGGTTTTTCAGTaGGGATTTCTTCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCFLVFQ*GFLQNS
Trigger: TGAGTTCTGAAGAAATCCCCACTGAAAAACCAGGAA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAAAGTTCTTGCGTGCTTaGCTGCACCATTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSKFLRA*LHHCAF
Trigger: GAAAGCACAATGGTGCAGCCAAGCACGCAAGAACTT...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCAGTTCTTTCTCAGTCTaGGAGACAACTGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSASSFSV*ETTEGR
Trigger: TCTGCCTTCAGTTGTCTCCCAGACTGAGAAAGAACT...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCATTGGTTTTTCGATTaGGGTCTCTTTGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANHWFFD*GLFGVT
Trigger: AGTAACTCCAAAGAGACCCCAATCGAAAAACCAATG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCTCTTTTCCTTTGGCTTaGATAACCCAAAGAGTCGGG +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSASFPLA*ITQRVG
Trigger: CCCGACTCTTTGGGTTATCCAAGCCAAAGGAAAAGA...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCCAACGTATCAGAACTaGCTTTCCGGGTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQPTYQN*LSGYLC
Trigger: GCACAAGTACCCGGAAAGTCAGTTCTGATACGTTGG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCTCACCATTAATGGCATaGGATTGTCCATCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSASPLMA*DCPSAS
Trigger: TGAAGCAGATGGACAATCTCATGCCATTAATGGTGA...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCTTCCTCAACCATGCTTaGCAAATCACAGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAFLNHA*QITGTF
Trigger: GAAAGTTCCTGTGATTTGTCAAGCATGGTTGAGGAA...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTCTTATGAGAACAGATaGCATTTTCTTCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSYENR*HFLPQP
Trigger: TGGTTGAGGAAGAAAATGTCATCTGTTCTCATAAGA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAAATGAGTCTGTTGAATaGGATAGAAATTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RAAEASRVLRHRFCACCRNESVE*DRNFQV
Trigger: CACCTGGAAATTTCTATCTCATTCAACAGACTCATT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATAAACTAAAATGTCAGTaGGTAGAACTGCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANKLKCQ*VELLEP
Trigger: AGGTTCAAGCAGTTCTACTCACTGACATTTTAGTTT...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAACTGACTCTGTTCTCCTaGGATCTTGGCCGTCATCAC +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNELTLFS*DLGRHH
Trigger: GTGATGACGGCCAAGATCTCAGGAGAACAGAGTCAG...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGTACTTTAGCCATCAGTaGGTTGGAGGCCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQYFSHQ*VGGPDL
Trigger: CAAGTCAGGGCCTCCAACGCACTGATGGCTAAAGTA...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGTATCACAAAGTAACTaGTCTTCTTCAGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCVSQSN*SSSGFG
Trigger: CCCAAAGCCTGAAGAAGAGCAGTTACTTTGTGATAC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTTTCTTTGCTCTTCTTaGTGCTGGACATTTTATTCC +
Preference number: 4 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMFLCSS*CWTFYS
Trigger: GGAATAAAATGTCCAGCAGCAAGAAGAGCAAAGAAA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAAGGCTCCCTTTTGGCTaGTTCATTTTGACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSRLPFG*FILTFA
Trigger: TGCAAAGGTCAAAATGAAGCAGCCAAAAGGGAGCCT...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAATTCCTCCAGGTGCTGTaGTTGCTGCTTCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNEFLQVL*LLLLQV
Trigger: AACCTGCAGAAGCAGCAAGCACAGCACCTGGAGGAA...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAAGACAGACTCGTTCTTaGTGGCACCAGGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNERQTRS*WHQALC
Trigger: GCAAAGAGCCTGGTGCCACCAAGAACGAGTCTGTCT...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAACATTGGTTTTTCGATTaGGGTCTCTTTGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: CILPTFCRAQASGRNLRQHWFFD*GLFGVT
Trigger: AGTAACTCCAAAGAGACCCCAATCGAAAAACCAATG...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCATCACTGTTGACTTATaGTCCAAGGATGCAAACACG +
Preference number: 4 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAITVDL*SKDANT
Trigger: CGTGTTTGCATCCTTGGACCATAAGTCAACAGTGAT...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAAGAACTCAATGCAGGTaGAGCCTCAGCAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNERTQCR*SLSRSV
Trigger: AACACTCCTGCTGAGGCTTCACCTGCATTGAGTTCT...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAATCGAGAGCAGAAGGCTaGTTACAATGGAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNESRAEG*LQWSAS
Trigger: TGAGGCACTCCATTGTAATCAGCCTTCTGCTCTCGA...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCATTTCATCACTGGGTaGGTGAAAGAGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQHFITG*VKEVRL
Trigger: GAGTCTGACCTCTTTCACTCACCCAGTGATGAAATG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACCAATCCAGGATGACTaGTTGTCATTAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSPIQDD*LSLMRW
Trigger: CCATCTCATTAATGACAATCAGTCATCCTGGATTGG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCTTTATCCACGTTATaGAGTAAAGAGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSALSTL*SKESLS
Trigger: GCTGAGTGACTCTTTACTGCATAACGTGGATAAAGC...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGTCATTGCTCTATCTTTaGCATCTTGCCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQSLLYL*HLAPEL
Trigger: CAGCTCTGGGGCAAGATGGCAAAGATAGAGCAATGA...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGACATTTCTGAAGAATaGACGTCTTCTTTAACTGAA +
Preference number: 4 (lower is better)
Translates to: LPTFCRAQASGRNLRQANDISEE*TSSLTE
Trigger: TTCAGTTAAAGAAGACGTGCATTCTTCAGAAATGTC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAAGGCTAGATTTTCTCTaGAGCCTTTGTGGACAAAAG +
Preference number: 4 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSRLDFL*SLCGQK
Trigger: CTTTTGTCCACAAAGGCTGCAGAGAAAATCTAGCCT...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGACCACATCTTTCTTCTaGTGTTTAAGGAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKTTSFF*CLRNLL
Trigger: CAGCAAGTTCCTTAAACAGCAGAAGAAAGATGTGGT...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAATTGACAGACTGGTTGTaGTGTCCACAGAACTTGCCG +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNELTDWL*CPQNLP
Trigger: CGGCAAGTTCTGTGGACAGCACAACCAGTCTGTCAA...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGAAAGTGCGTCATCTTTaGTTACTGATTCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: PEWFITSVLAVAMREAGKKVRHL*LLIHSL
Trigger: CAGAGAGTGAATCAGTAACCAAAGATGACGCACTTT...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTCATCTGTGGAAGAACTaGATCCTGTTGTATCACAAA +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCHLWKN*ILLYHK
Trigger: TTTGTGATACAACAGGATCCAGTTCTTCCACAGATG...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGGAGAAAGAGAACGCATaGAGCTCCTCAGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQEKENA*SSSEKS
Trigger: GCTCTTTTCTGAGGAGCTCCATGCGTTCTCTTTCTC...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAATCATTTCTGCATCACTaGCTGCGTTCTTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNESFLHH*LRSSQV
Trigger: GACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGA...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp TGTTCCTCCAAAATGCAAGGCAGTTTCAGACCTCATTaGGAAAAACCCTCTGGGCCTTTAGGGAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: CSSKMQGSFRPH*EKPSGPLGNPD
Trigger: GTCAGGATTCCCTAAAGGCCCAGAGGGTTTTTCCAAATGAGGTCTGAAACTGCCTTGCATTTTGGAGGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTTGATTCTTTGCATCTaGAACACAGAGATGACAAAC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCLILCI*NTEMTN
Trigger: GTTTGTCATCTCTGTGTTTCAGATGCAAAGAATCAA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCATTGCCAACTCCAGTaGTGTTTTGTATGGAGACAC +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQHCQLQ*CFVWRH
Trigger: GTGTCTCCATACAAAACATCACTGGAGTTGGCAATG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTTTCTTTGCTCTTCTTaGTGCTGGACATTTTATTCC +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCFLCSS*CWTFYS
Trigger: GGAATAAAATGTCCAGCAGCAAGAAGAGCAAAGAAA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAATTTCTTCTCGTAACTTaGCACTTTGCTGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNEFLLVT*HFAVHG
Trigger: GCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAA...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTCATTGCAGTATCCTTTaGAATAAAACTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCHCSIL*NKTGYL
Trigger: CAAGTACCCAGTTTTATTCCAAAGGATACTGCAATG...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCAGCCTTCTTACTACTaGACTGCTCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQQPSYY*TAHLLL
Trigger: AAGAAGAAGATGAGCAGTTCAGTAGTAAGAAGGCTG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR TCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCCACTCACCAAACTCTaGAGGATTTCCACTTCATTT +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQPLTKL*RISTSF
Trigger: AAATGAAGTGGAAATCCTTCAGAGTTTGGTGAGTGG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGACATTTCTGAAGAATaGACGTCTTCTTTAACTGAA +
Preference number: 4 (lower is better)
Translates to: LERITLGTAVTRPLYFLCDISEE*TSSLTE
Trigger: TTCAGTTAAAGAAGACGTGCATTCTTCAGAAATGTC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCTGGTGGCAAAGACATaGTTTGTAATATCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQLVAKT*FVISAF
Trigger: GAAAGCCGATATTACAAACCATGTCTTTGCCACCAG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAACCACATCTTTCTTCTaGTGTTTAAGGAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNETTSFF*CLRNLL
Trigger: CAGCAAGTTCCTTAAACAGCAGAAGAAAGATGTGGT...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCCACTTCATTGTCTTTaGTACATTGCAGTATCCTTT +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQPLHCL*YIAVSF
Trigger: AAAGGATACTGCAATGTACCAAAGACAATGAAGTGG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
3UTR CAA 72 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTaGTTCTTCCTAAACGAAATGAGGAATACGTACAAA +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHL*FFLNEMRNTYK
Trigger: TTTGTACGTATTCCTCATTTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAACAGTTGTTTCAGTTGTaGTACTGTCTGAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: THEASCWSHKHLLFFLNEQLFQL*YCLNSQ
Trigger: TTGAGAATTCAGACAGTAGCACAACTGAAACAACTG...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR GCA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGTTCTTACTACTGAACTaGTCATCTTCTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQFLLLN*SSSSSQ
Trigger: TTGTGAAGAAGAAGATGAGCAGTTCAGTAGTAAGAA...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp GTCTCTTCCCGCTCGGCCAGCTTGGCCTCTCGGTCTCGGAGCTCCTaGTCCCGGGCCTCCCACTCACGCTCCCGGCGGCGCTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VSSRSASLASRSRSS*SRASHSRSRRRFSS
Trigger: GGAGGAAAAGCGCCGCCGGGAGCGTGAGTGGGAGGCCCGGGAGCAGGAGCTCCGAGACCGAGAGGCCAAGCTGGCCGAGCGGGAAGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TCTTCTGCTGGAGCTCTTCGCGGTCCCTCTCCAGGTCCTGCTGCCTaGGGCGGACCGTCTCTTCCCGCTCGGCCAGCTTGGCCTCTCGGT +
Preference number: 5 (lower is better)
Translates to: SSAGALRGPSPGPAA*GGPSLPARPAWPLG
Trigger: ACCGAGAGGCCAAGCTGGCCGAGCGGGAAGAGACGGTCCGCCGCAGGCAGCAGGACCTGGAGAGGGACCGCGAAGAGCTCCAGCAGAAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp CCCTTCTTCTGCTGGAGCTCTTCGCGGTCCCTCTCCAGGTCCTGCTaGCTGCGGCGGACCGTCTCTTCCCGCTCGGCCAGCTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: PFFCWSSSRSLSRSC*LRRTVSSRSASLAS
Trigger: AGAGGCCAAGCTGGCCGAGCGGGAAGAGACGGTCCGCCGCAGGCAGCAGGACCTGGAGAGGGACCGCGAAGAGCTCCAGCAGAAGAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGTTGGAGGCCCTGACTaGCCTGATGACGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVVGGPD*PDDGLH
Trigger: GTGGAGGCCGTCATCAGGCAAGTCAGGGCCTCCAAC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCCTCCCAGGACTCCTTaGGCAGCACAGAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVPPRTP*AAQSAL
Trigger: AAGAGCACTCTGTGCTGCCAAAGGAGTCCTGGGAGG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGCTCCTCTCTGGAGCTaGCATGGACCTCCACCATCT +
Preference number: 5 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAAPLWS*HGPPPS
Trigger: AGATGGTGGAGGTCCATGCAAGCTCCAGAGAGGAGC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCCAGGCTCACAGGCGTaGCCCCTTCCTTGTTGTGGA +
Preference number: 5 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLPGSQA*PLPCCG
Trigger: TCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTGG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTCTTCAAGTGTTGCTGTaGGGCTGGAACCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGALQVLL*GWNPPV
Trigger: AACAGGAGGGTTCCAGCCCAACAGCAACACTTGAAG...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTTGGAGGCCCTGACTaGCCTGATGACGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGVGGPD*PDDGLH
Trigger: GTGGAGGCCGTCATCAGGCAAGTCAGGGCCTCCAAC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGACTCTCGGGCTGTGCGTaGGGGAGCAATCCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGLSGCA*GSNPLA
Trigger: TGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAG...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGAGAACTCATCCGAATaGGGCAAGAAGGATGGGATC +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVENSSE*GKKDGI
Trigger: GATCCCATCCTTCTTGCCCAATTCGGATGAGTTCTC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp CACTCCACAGTCGGGTACGCTCTGAAGGCAGCTGTCTTGATGAGATaGAGACCCGGAGTCCATGGCAGATGCTGGCTCCGCCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: HSTVGYALKAAVLMR*RPGVHGRCWLRLFP
Trigger: GGGGAAGAGGCGGAGCCAGCATCTGCCATGGACTCCGGGTCTGCATCTCATCAAGACAGCTGCCTTCAGAGCGTACCCGACTGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAGGCGTTGCCCCTTCCTaGTTGTGGATGCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQGVAPS*LWMLRA
Trigger: AGCTCTCAGCATCCACAACAAGGAAGGGGCAACGCC...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTTTTTCTCTGCAGCCTTaGTGGACAAAAGCACCACAG +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVFSLQP*WTKAPQ
Trigger: CTGTGGTGCTTTTGTCCACAAAGGCTGCAGAGAAAA...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTATCACTTCCTGCCGTTaGACCACATCTTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVITSCR*TTSFFC
Trigger: GCAGAAGAAAGATGTGGTCAAACGGCAGGAAGTGAT...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGAGAGCCTCCTCTGTGTaGGAGCGGAAGAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: PAHASWGRPQACTEQRMERASSV*ERKSTL
Trigger: GAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCT...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp GTGAAGTTCGTGATAACCTCGCTCCAGTGCCAGGCTCACAGGCGTTaGCCCTTCCTTGTTGTGGATGCTGAGAGCTCCACGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: VKFVITSLQCQAHRR*PFLVVDAESSTATW
Trigger: CCAGGTGGCCGTGGAGCTCTCAGCATCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTGGCACTGGAGCGAGGTTATCACGAACTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TTGAGAGCCTCCTCTGTGTTGGAGCGGAAGAGCACTCTCGGGCTGTaGGTTGGGGAGCAATCCTCTGGCAAGGGAGTGCTGCACTCAGTC +
Preference number: 5 (lower is better)
Translates to: LRASSVLERKSTLGL*VGEQSSGKGVLHSV
Trigger: GACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp GCTGTTTCTGGGCAGCCCGTAGCCTCTCTAGGTCACACTGGTAAGTaGCCTTCTTCTGCTGGAGCTCTTCGCGGTCCCTCTCCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: AVSGQPVASLGHTGK*PSSAGALRGPSPGP
Trigger: AGGACCTGGAGAGGGACCGCGAAGAGCTCCAGCAGAAGAAGGGCACTTACCAGTGTGACCTAGAGAGGCTACGGGCTGCCCAGAAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp TCAGGGCAGGGCTCTATGGCACACCAGCTTTCTCGGTTGATCGCCTaGGTCCCCGGGCCTTGCTTCATCTTGGGTGTGGCAGCTCCATTT +
Preference number: 5 (lower is better)
Translates to: SGQGSMAHQLSRLIA*VPGPCFILGVAAPF
Trigger: AAATGGAGCTGCCACACCCAAGATGAAGCAAGGCCCGGGGACCCAGGCGATCAACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CCA 90 bp AGCCTCCTCTGTGTTGGAGCGGAAGAGCACTCTCGGGCTGTGCGTTaGGGAGCAATCCTCTGGCAAGGGAGTGCTGCACTCAGTCATGTC +
Preference number: 5 (lower is better)
Translates to: SLLCVGAEEHSRAVR*GAILWQGSAALSHV
Trigger: GACATGACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGAGTGACTGTGTCAGCTaGTGGGTCTTCTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PAHASWGRPQACTEQRMESDCVS*WVFWAE
Trigger: CTCTGCCCAGAAGACCCACAAGCTGACACAGTCACT...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGAGCATGCCTTCTTTaGAGGCACACTCCGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGGACLL*RHTPCP
Trigger: TGGGCACGGAGTGTGCCTCAAAAGAAGGCATGCTCC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTTCCTGCTCCACTTCATaGTCTTTGGTACATTGCAGT +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVSCSTS*SLVHCS
Trigger: ACTGCAATGTACCAAAGACAATGAAGTGGAGCAGGA...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAAATCAGCGGTCCTCCTTaGAGAGCCTCCTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQISGPP*RASSVL
Trigger: CAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGAT...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGCCTGCCATGTTTATTaGAAACCTGGCAAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVACHVY*KPGKGS
Trigger: AGAACCTTTGCCAGGTTTCAAATAAACATGGCAGGC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGCCCCTCGGGAACTTTaGTCTGGCTGGCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLAPREL*SGWLSP
Trigger: TGGGCTCAGCCAGCCAGACAAAAGTTCCCGAGGGGC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CGCTCTGAAGGCAGCTGTCTTGATGAGATGCAGACCCGGAGTCCATaGCAGATGCTGGCTCCGCCTCTTCCCCCTTTCTCCCCACATCTT +
Preference number: 5 (lower is better)
Translates to: RSEGSCLDEMQTRSP*QMLAPPLPPFSPHL
Trigger: AAGATGTGGGGAGAAAGGGGGAAGAGGCGGAGCCAGCATCTGCCATGGACTCCGGGTCTGCATCTCATCAAGACAGCTGCCTTCAGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CCTCCTGTTCTCCACCAATGCCTACAGGGCTGGTATTTCCCATGCTaGTCCGAAGCTCTACAGCAGAGGATGGAGGTGGGTCAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PPVLHQCLQGWYFPC*SEALQQRMEVGQWP
Trigger: GGGCCACTGACCCACCTCCATCCTCTGCTGTAGAGCTTCGGACCAGCATGGGAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 90 bp GCCCAAGAGCTCGCATTGAACTCCGCTGGTTCATTTCTGCATCACTaGCTGCGTTCTTCCCAGGTCCCCAGCTGTGCCTCCGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: AQELALNSAGSFLHH*LRSSQVPSCASGKE
Trigger: CTCCTTTCCGGAGGCACAGCTGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGGAGTTCAATGCGAGCTCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp GGAGCGGAAGAGCACTCTCGGGCTGTGCGTTGGGGAGCAATCCTCTaGCAAGGGAGTGCTGCACTCAGTCATGTCCCGGAAAATCATCTC +
Preference number: 5 (lower is better)
Translates to: GAEEHSRAVRWGAIL*QGSAALSHVPENHL
Trigger: GAGATGATTTTCCGGGACATGACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CAGAGGGACACCAGCTCATACTCCGCTGGTTCATTTCTGCATCACTaGCTGCGTTCTTCCCAGGTCCCCAGCTGTGCCTCCGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: QRDTSSYSAGSFLHH*LRSSQVPSCASGKE
Trigger: CTCCTTTCCGGAGGCACAGCTGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGGAGTATGAGCTGGTGTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208708.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTGCATCATCTTCAACTTaGTCCTCTTCAGCAAGCAAT +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVASSST*SSSASN
Trigger: ATTGCTTGCTGAAGAGGACAAAGTTGAAGATGATGC...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCTGAAGGCAGCTGTCTaGATGAGATGCAGACCCGGA +
Preference number: 5 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDLKAAV*MRCRPG
Trigger: TCCGGGTCTGCATCTCATCAAGACAGCTGCCTTCAG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTGTGCCTTCCCCTACTaGAGGCTTATTGTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLCAFPY*RLIVLG
Trigger: ACCCAGAACAATAAGCCTCAAGTAGGGGAAGGCACA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGGTGGCACCAGGCTCTTaGCAGCCCCACCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQVAPGS*QPHLQS
Trigger: TGACTGAAGGTGGGGCTGCAAAGAGCCTGGTGCCAC...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCACCTGGCAGCCCACTaGGCAACAGAGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANHLAAH*ATEMSR
Trigger: GCGGCTCATCTCTGTTGCCAAGTGGGCTGCCAGGTG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGGGCCTTGCTTCATCTaGGGTGTGGCAGCTCCATTT +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGGPCFI*GVAAPF
Trigger: AAATGGAGCTGCCACACCCAAGATGAAGCAAGGCCC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAATCAGCGGTCCTCCTTaGAGAGCCTCCTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGISGPP*RASSVL
Trigger: CAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGAT...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGGCCCCTCGGGAACTTTaGTCTGGCTGGCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SEALLGSMYLRGYITKGLAPREL*SGWLSP
Trigger: TGGGCTCAGCCAGCCAGACAAAAGTTCCCGAGGGGC...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp GGCAGAGGGTGTGTGCTGCTGTGCTTTCTCCTCGGCACAGAGGGCTaGCATAGGTTTTTCACAGAGTCCTGGTATCTCCTGCCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GRGCVLLCFLLGTEG*HRFFTESWYLLPRG
Trigger: CCCTCTGGGCAGGAGATACCAGGACTCTGTGAAAAACCTATGTCAGCCCTCTGTGCCGAGGAGAAAGCACAGCAGCACACACCCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 90 bp AGAGAGGGAGACACTCTGCTGGGACCGTCTGTTAGTAAACATTGGTaGCGCAGTGGCCTCATCAGCCAAGAGGACTGCAGACCTAGGGCG +
Preference number: 5 (lower is better)
Translates to: REGDTLLGPSVSKHW*RSGLISQEDCRPRA
Trigger: CGCCCTAGGTCTGCAGTCCTCTTGGCTGATGAGGCCACTGCGGCACCAATGTTTACTAACAGACGGTCCCAGCAGAGTGTCTCCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 90 bp CAGGCTCCGCTGCTTCTCCTGCTCAATGAGAGAGCTGGGGCGAGATaGACTCCTTGTGAGGACCTTCTCTGTCAGCACCAGCTTCTGATC +
Preference number: 5 (lower is better)
Translates to: QAPLLLLLNERAGAR*TPCEDLLCQHQLLI
Trigger: GATCAGAAGCTGGTGCTGACAGAGAAGGTCCTCACAAGGAGTGCATCTCGCCCCAGCTCTCTCATTGAGCAGGAGAAGCAGCGGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp GGGACACCAGCTCATACTCCGCTGGTTCATTTCTGCATCACTGGCTaGGTTCTTCCCAGGTCCCCAGCTGTGCCTCCGGAAAGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: GTPAHTPLVHFCITG*VLPRSPAVPPERRK
Trigger: CTTTCTCCTTTCCGGAGGCACAGCTGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGGAGTATGAGCTGGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208708.2
CDS-3UTR CAA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACGATTTCCAGCACTGGTaGCCAGGAACTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDDFQHW*PGTELH
Trigger: ATGCAGCTCAGTTCCTGGCAACCAGTGCTGGAAATC...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATCCAGGCTCACAGGCGTaGCCCCTTCCTTGTTGTGGA +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANPGSQA*PLPCCG
Trigger: TCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTGG...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGTGGCACCAGGCTCTTaGCAGCCCCACCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMVAPGS*QPHLQS
Trigger: TGACTGAAGGTGGGGCTGCAAAGAGCCTGGTGCCAC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCCCAGGGAAGCCTGTGCCACTaGCTTCATGTCAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RITLGTAVTRPLYFLCAQGSLCH*LHVSLG
Trigger: CCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTCC...CTGGGCACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTGACATGTTCTCATCATaGCCAACTCCAGTGATGTTT +
Preference number: 5 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGADMFSS*PTPVMF
Trigger: AAACATCACTGGAGTTGGCAATGATGAGAACATGTC...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCTTTCTTCTCGTAACTaGCCACTTTGCTGTCCACGG +
Preference number: 5 (lower is better)
Translates to: PAHASWGRPQACTEQRMELSSRN*PLCCPR
Trigger: CCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAG...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGCGTCTTAGGTCCTCCTaGGCGAACATCTGCCCACTC +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLRLRSS*ANICPL
Trigger: GAGTGGGCAGATGTTCGCCAAGGAGGACCTAAGACG...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTTTAAGGAGATCACTGTaGACTTATGGTCCAAGGATG +
Preference number: 5 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGALRRSL*TYGPRM
Trigger: CATCCTTGGACCATAAGTCAACAGTGATCTCCTTAA...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp AACCCTCCTGTTCTCCACCAATGCCTACAGGGCTGGTATTTCCCATaGTGGTCCGAAGCTCTACAGCAGAGGATGGAGGTGGGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: NPPVLHQCLQGWYFP*WSEALQQRMEVGQW
Trigger: CCACTGACCCACCTCCATCCTCTGCTGTAGAGCTTCGGACCAGCATGGGAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 90 bp TCAGACGCACCTGGCAGCCCACTTGGCAACAGAGATGAGCCGCTCTaGTCTGTACTCGAGGCTTTCTGCTTTGAATCGGCAGACAGACTC +
Preference number: 5 (lower is better)
Translates to: SDAPGSPLGNRDEPL*SVLEAFCFESADRL
Trigger: GAGTCTGTCTGCCGATTCAAAGCAGAAAGCCTCGAGTACAGAGCAGAGCGGCTCATCTCTGTTGCCAAGTGGGCTGCCAGGTGCGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 90 bp CTCTCGGGCTGTGCGTTGGGGAGCAATCCTCTGGCAAGGGAGTGCTaGACTCAGTCATGTCCCGGAAAATCATCTCCTTCTCTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LSGCALGSNPLAREC*TQSCPGKSSPSLPA
Trigger: TGCTGGAAGAGAAGGAGATGATTTTCCGGGACATGACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp GCACTCTCGGGCTGTGCGTTGGGGAGCAATCCTCTGGCAAGGGAGTaGTGCACTCAGTCATGTCCCGGAAAATCATCTCCTTCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: ALSGCALGSNPLARE*CTQSCPGKSSPSLP
Trigger: TGGAAGAGAAGGAGATGATTTTCCGGGACATGACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp GCCTTCCAGACTGAAACTCCGCTGGTTCATTTCTGCATCACTGGCTaGGTTCTTCCCAGGTCCCCAGCTGTGCCTCCGGAAAGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: AFQTETPLVHFCITG*VLPRSPAVPPERRK
Trigger: CTTTCTCCTTTCCGGAGGCACAGCTGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGGAGTTTCAGTCTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207923.2
ENSMUST00000207998.2
CDS CCA 90 bp AGGGCTGGTATTTCCCATGCTGGTCCGAAGCTCTACAGCAGAGGATaGAGGTGGGTCAGTGGCCCCGTCTCCTACCTTATCGGTATCACT +
Preference number: 5 (lower is better)
Translates to: RAGISHAGPKLYSRG*RWVSGPVSYLIGIT
Trigger: AGTGATACCGATAAGGTAGGAGACGGGGCCACTGACCCACCTCCATCCTCTGCTGTAGAGCTTCGGACCAGCATGGGAAATACCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 90 bp CTGTTGGGCTGGAACCCTCCTGTTCTCCACCAATGCCTACAGGGCTaGTATTTCCCATGCTGGTCCGAAGCTCTACAGCAGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LLGWNPPVLHQCLQG*YFPCWSEALQQRME
Trigger: CTCCATCCTCTGCTGTAGAGCTTCGGACCAGCATGGGAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGGAGGGTTCCAGCCCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS-3UTR CAA 90 bp GGAGCTCCCATGTCAACCTCCGCTTTCCTCAGGGCCTCATGCACCTGCACAGACCGTGACCAGGAGCAATaGTCTCCAACGTATCAGAAC +
Preference number: 5 (lower is better)
Translates to: GAPMSTSAFLRASCTCTDRDQEQ*SPTYQN
Trigger: GTTCTGATACGTTGGAGACAATTGCTCCTGGTCACG...GTCTGTGCAGGTGCATGAGGCCCTGAGGAAAGCGGAGGTTGACATGGGAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGGCGTTGCCCCTTCCTaGTTGTGGATGCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANGVAPS*LWMLRA
Trigger: AGCTCTCAGCATCCACAACAAGGAAGGGGCAACGCC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCCTCCCAGGACTCCTTaGGCAGCACAGAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMPPRTP*AAQSAL
Trigger: AAGAGCACTCTGTGCTGCCAAAGGAGTCCTGGGAGG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTCTACTCCAGAATAGTTaGTTCCAGTTACTTCGTTTC +
Preference number: 5 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGALLQNS*FQLLRF
Trigger: GAAACGAAGTAACTGGAACAAACTATTCTGGAGTAG...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTCTCAAGTCTTTCCTTaGTGCCTTCCCCTACTTGAG +
Preference number: 5 (lower is better)
Translates to: PAHASWGRPQACTEQRMESQVFP*CLPLLE
Trigger: CTCAAGTAGGGGAAGGCACAAAGGAAAGACTTGAGA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CGTGCGTGCGGGACAGGCAGGAGGGGCGGCGTGGTGCAGGCAGGTCAAAGCGTTCATTTCCTTGATTCTTaGCATCTGAAACACAGAGAT +
Preference number: 5 (lower is better)
Translates to: RACGTGRRGGVVQAGQSVHFLDS*HLKHRD
Trigger: ATCTCTGTGTTTCAGATGCAAAGAATCAAGGAAATG...AACGCTTTGACCTGCCTGCACCACGCCGCCCCTCCTGCCTGTCCCGCACGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGGAGCATGCCTTCTTTaGAGGCACACTCCGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANGACLL*RHTPCP
Trigger: TGGGCACGGAGTGTGCCTCAAAAGAAGGCATGCTCC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGCAATGGGCGGCGCTAAAGCCATTGGCACTTaGATGATTTCTGGATCTGTT +
Preference number: 5 (lower is better)
Translates to: GGWEEPVWQWAGLAMGGAKAIGT*MISGSV
Trigger: AACAGATCCAGAAATCATCAAAGTGCCAATGGCTTT...AGCGCCGCCCATTGCTAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAATTTTCTCTGCAGCCTTaGTGGACAAAAGCACCACAG +
Preference number: 5 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQFSLQP*WTKAPQ
Trigger: CTGTGGTGCTTTTGTCCACAAAGGCTGCAGAGAAAA...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCGTCTTAGGTCCTCCTaGGCGAACATCTGCCCACTC +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMRLRSS*ANICPL
Trigger: GAGTGGGCAGATGTTCGCCAAGGAGGACCTAAGACG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGAGAGCCTCCTCTGTGTaGGAGCGGAAGAGCACTCTC +
Preference number: 5 (lower is better)
Translates to: SEALLGSMYLRGYITKGLRASSV*ERKSTL
Trigger: GAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCT...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp CTGCCACATTCTTCCAACCTGCCACTAGAAGTCACTGTGCTCGGCTaGTGTGTAGCCTCAGCAGAAGGCGTGCCAGCCTCAGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LPHSSNLPLEVTVLG*CVASAEGVPASAVE
Trigger: TTCTACAGCTGAGGCTGGCACGCCTTCTGCTGAGGCTACACATCAGCCGAGCACAGTGACTTCTAGTGGCAGGTTGGAAGAATGTGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TTCCTCAGTCAGAAGCTGGTGAAGTTCGTGATAACCTCGCTCCAGTaGCAGGCTCACAGGCGTTGCCCCTTCCTTGTTGTGGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: FLSQKLVKFVITSLQ*QAHRRCPFLVVDAE
Trigger: CTCAGCATCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTGGCACTGGAGCGAGGTTATCACGAACTTCACCAGCTTCTGACTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp CTTGGCAACAGAGATGAGCCGCTCTGCTCTGTACTCGAGGCTTTCTaGTTTGAATCGGCAGACAGACTCGTTCTTGGTGGCACCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LGNRDEPLCSVLEAF*FESADRLVLGGTRL
Trigger: GAGCCTGGTGCCACCAAGAACGAGTCTGTCTGCCGATTCAAAGCAGAAAGCCTCGAGTACAGAGCAGAGCGGCTCATCTCTGTTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS-3UTR CAA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCTTCCTCAACCATGCTaGACAAATCACAGGAACTTT +
Preference number: 5 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLLPQPC*TNHRNF
Trigger: AAAGTTCCTGTGATTTGTCAAGCATGGTTGAGGAAG...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGTTAAGGAGATCACTGTaGACTTATGGTCCAAGGATG +
Preference number: 5 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLLRRSL*TYGPRM
Trigger: CATCCTTGGACCATAAGTCAACAGTGATCTCCTTAA...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGATCCAATGAGCCTGATTaGGTTACAGAAGGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGSNEPD*VTEGAD
Trigger: GTCTGCACCTTCTGTAACCAAATCAGGCTCATTGGA...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp GCAAAGTGCATCAGGGTTTCCCGAGGGCCACCGTCATGCAAAGTGTaGTCTGTCCCTAACACGTTCCATTCTGCAGGCAGCTTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: AKCIRVSRGPPSCKV*SVPNTFHSAGSFRC
Trigger: ACACCTGAAGCTGCCTGCAGAATGGAACGTGTTAGGGACAGATCACACTTTGCATGACGGTGGCCCTCGGGAAACCCTGATGCACTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp TGCCACTTGCTTCATGTCAGCTTGGGGGACATTGTTATTGATCACTaGGAGCCCTGTCTCTGTGGGGAGGTCCCTGGCAAGAGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: CHLLHVSLGDIVIDH*EPCLCGEVPGKRLH
Trigger: ATGCAGCCTCTTGCCAGGGACCTCCCCACAGAGACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS TCA 90 bp AAGCCTGTGCCACTTGCTTCATGTCAGCTTGGGGGACATTGTTATTaGTCACTGAGAGCCCTGTCTCTGTGGGGAGGTCCCTGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: KPVPLASCQLGGHCY*SLRALSLWGGPWQE
Trigger: CTCTTGCCAGGGACCTCCCCACAGAGACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS TCA 90 bp ATGCTGCTTCAGGGCAGGGCTCTATGGCACACCAGCTTTCTCGGTTaGTCTTCAGCAACACCACATCGACAGTCCTGTCCACCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: MLLQGRALWHTSFLG*SSATPHRQSCPPWR
Trigger: TCTCCAAGGTGGACAGGACTGTCGATGTGGTGTTGCTGAAGATCAACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTGAAGCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207998.2
CDS GCA 90 bp GTGTCAGCTTGTGGGTCTTCTGGGCAGAGGGTGGTGCAAAGTTCTTaGGTGCTTGGCTGCACCATTGTGCTTTCAGGCAGGCTAGCTTTA +
Preference number: 5 (lower is better)
Translates to: VSACGSSGQRVVQSS*VLGCTIVLSGRLAL
Trigger: TAAAGCTAGCCTGCCTGAAAGCACAATGGTGCAGCCAAGCACGCAAGAACTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CCATGCTGGTCCGAAGCTCTACAGCAGAGGATGGAGGTGGGTCAGTaGCCCCGTCTCCTACCTTATCGGTATCACTCAAATCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: PCWSEALQQRMEVGQ*PRLLPYRYHSNLFH
Trigger: ATGGAAGAGATTTGAGTGATACCGATAAGGTAGGAGACGGGGCCACTGACCCACCTCCATCCTCTGCTGTAGAGCTTCGGACCAGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 90 bp CACCAGGCTCTTTGCAGCCCCACCTTCAGTCAGCAGGGAGACCTGTaGGGCCACTTCCTTGATGTCTTTAGTTTCTGTTTTCAGACAGGC +
Preference number: 5 (lower is better)
Translates to: HQALCSPTFSQQGDL*GHFLDVFSFCFQTG
Trigger: GCCTGTCTGAAAACAGAAACTAAAGACATCAAGGAAGTGGCCCCACAGGTCTCCCTGCTGACTGAAGGTGGGGCTGCAAAGAGCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 90 bp TTTAGAGAGGGAGACACTCTGCTGGGACCGTCTGTTAGTAAACATTaGTGCCGCAGTGGCCTCATCAGCCAAGAGGACTGCAGACCTAGG +
Preference number: 5 (lower is better)
Translates to: FREGDTLLGPSVSKH*CRSGLISQEDCRPR
Trigger: CCTAGGTCTGCAGTCCTCTTGGCTGATGAGGCCACTGCGGCACCAATGTTTACTAACAGACGGTCCCAGCAGAGTGTCTCCCTCTCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 90 bp GCTATTCCGCTCCTCTCTGGAGCTTGCATGGACCTCCACCATCTCTaGATCTTTCACCCCCATACTGATGAGGAACAGGCCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: AIPLLSGACMDLHHL*IFHPHTDEEQAFLL
Trigger: GAGGAGAAAGGCCTGTTCCTCATCAGTATGGGGGTGAAAGATCCAGAGATGGTGGAGGTCCATGCAAGCTCCAGAGAGGAGCGGAATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGCAGTAGTGGGGCAATTCTCTGGTCTTCCCTaGACATTTCTGAAGAATGCA +
Preference number: 5 (lower is better)
Translates to: GSSACLVSPQGTLAVVGQFSGLP*TFLKNA
Trigger: TGCATTCTTCAGAAATGTCAAGGGAAGACCAGAGAA...TTGCCCCACTACTGCAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACAGACAGACTCGTTCTaGGTGGCACCAGGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQQTDSF*VAPGSL
Trigger: CAAAGAGCCTGGTGCCACCAAGAACGAGTCTGTCTG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGAAGTCAGTGACACCTTaGTCCAGGAAAGCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLKSVTP*SRKASG
Trigger: GCCAGAAGCTTTCCTGGACAAAGGTGTCACTGACTT...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGGAAGCCTGTGCCACTaGCTTCATGTCAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCGSLCH*LHVSLG
Trigger: CCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTCC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTCTGGGGTCTGAGGCAGTAGCGCCTGCCTGGTTTCTCCGCAGGGCACACTTGAAGAACTGGATCCTGTaGTATCACAAAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: PLGSEAVAPAWFLRRAHLKNWIL*YHKVTA
Trigger: AGCAGTTACTTTGTGATACAACAGGATCCAGTTCTT...CAAGTGTGCCCTGCGGAGAAACCAGGCAGGCGCTACTGCCTCAGACCCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGATGCTGTTTAAGGAACTaGCTGTCCACTGTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: RAAEASRVLRHRFCACCRCCLRN*LSTVRL
Trigger: GAGCCGGACAGTGGACAGCAAGTTCCTTAAACAGCA...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGTGCTGTTTAAGGAACTaGCTGTCCACTGTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: SEALLGSMYLRGYITKGLCCLRN*LSTVRL
Trigger: GAGCCGGACAGTGGACAGCAAGTTCCTTAAACAGCA...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTGCTCCTCTCTGGAGCTaGCATGGACCTCCACCATCT +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCAPLWS*HGPPPS
Trigger: AGATGGTGGAGGTCCATGCAAGCTCCAGAGAGGAGC...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTGTTCTCCTGAGATCTaGGCCGTCATCACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANCSPEI*AVITLF
Trigger: GAAGAGGGTGATGACGGCCAAGATCTCAGGAGAACA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCCTGCCATGTTTATTaGAAACCTGGCAAAGGTTCT +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGACHVY*KPGKGS
Trigger: AGAACCTTTGCCAGGTTTCAAATAAACATGGCAGGC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGTCTCCTTCTTTTCCTTaGGCTTGGATAACCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PAHASWGRPQACTEQRMESPSFP*AWITQR
Trigger: TCTTTGGGTTATCCAAGCCAAAGGAAAAGAAGGAGA...CTCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp GTGTGGCAGCTCCATTTCCTACAGCCTCCTCCTCAGAAGCAGCACTaGTCCTACTCAGAAGGTCCACTTCATCTCCAGTTCTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: VWQLHFLQPPPQKQH*SYSEGPLHLQFWCL
Trigger: CAGACACCAGAACTGGAGATGAAGTGGACCTTCTGAGTAGGATCAGTGCTGCTTCTGAGGAGGAGGCTGTAGGAAATGGAGCTGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 90 bp AAGGCAGCTGTCTTGATGAGATGCAGACCCGGAGTCCATGGCAGATaGTGGCTCCGCCTCTTCCCCCTTTCTCCCCACATCTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: KAAVLMRCRPGVHGR*WLRLFPLSPHIFIF
Trigger: AAAAATAAAGATGTGGGGAGAAAGGGGGAAGAGGCGGAGCCAGCATCTGCCATGGACTCCGGGTCTGCATCTCATCAAGACAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp CCAACATCTGTTGAAGAGCTGTCTGGTAGCTCCCTTCCAGAAGAGTaGTGGCATGCATCTGGTTCTGTGACCATGGCATCCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: PTSVEELSGSSLPEE*WHASGSVTMASCST
Trigger: TGTGCTGCAGGATGCCATGGTCACAGAACCAGATGCATGCCAGCACTCTTCTGGAAGGGAGCTACCAGACAGCTCTTCAACAGATGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CTCTGTGGGGAGGTCCCTGGCAAGAGGCTGCATTGGTTTTTCGATTaGGGTCTCTTTGGAGTTACTCGTGGCACAGTTAAGGTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LCGEVPGKRLHWFFD*GLFGVTRGTVKVCS
Trigger: GGAACAGACCTTAACTGTGCCACGAGTAACTCCAAAGAGACCCCAATCGAAAAACCAATGCAGCCTCTTGCCAGGGACCTCCCCACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS-3UTR CAA 90 bp TCCTGCACACGCGAGCTGGGGAAGGCCTCAAGCATGCACAGAGCAACGCATGGAGCATCATCTTCAACTTaGTCCTCTTCAGCAAGCAAT +
Preference number: 5 (lower is better)
Translates to: SCTRELGKASSMHRATHGASSST*SSSASN
Trigger: ATTGCTTGCTGAAGAGGACAAAGTTGAAGATGATGC...TCCATGCGTTGCTCTGTGCATGCTTGAGGCCTTCCCCAGCTCGCGTGTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCCTGAAGGCAGCTGTCTaGATGAGATGCAGACCCGGA +
Preference number: 5 (lower is better)
Translates to: QVINKHQVTGRFLHNCSALKAAV*MRCRPG
Trigger: TCCGGGTCTGCATCTCATCAAGACAGCTGCCTTCAG...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGCATCCCATCTGAACTaGGGCCTGGCATGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANASHLN*GLAWLN
Trigger: ATTTAACCATGCCAGGCCCAAGTTCAGATGGGATGC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AACTCAAGGCCACCTGTGAAGCACAGGCCTCAGCGAGGCCCTCCTGGGGAGTATGAAAGTGCGTCATCTTaGGTTACTGATTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: NSRPPVKHRPQRGPPGEYESASS*VTDSLS
Trigger: AGAGAGTGAATCAGTAACCAAAGATGACGCACTTTC...ATACTCCCCAGGAGGGCCTCGCTGAGGCCTGTGCTTCACAGGTGGCCTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTCTATCTTTGCCATCTaGCCCCAGAGCTGTGGAACT +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMSIFAI*PQSCGT
Trigger: AGTTCCACAGCTCTGGGGCAAGATGGCAAAGATAGA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTCAGACAGACTCGTTCTaGGTGGCACCAGGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCQTDSF*VAPGSL
Trigger: CAAAGAGCCTGGTGCCACCAAGAACGAGTCTGTCTG...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTCCAGCGTCTCTCTCTaGCAATCAAGTGGTTCTATC +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLSSVSL*QSSGSI
Trigger: GATAGAACCACTTGATTGCAAGAGAGAGACGCTGGA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTGGCAAGAGGCTGCATaGGTTTTTCGATTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANWQEAA*VFRLGS
Trigger: AGACCCCAATCGAAAAACCAATGCAGCCTCTTGCCA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTGGCAAGAGGCTGCATaGGTTTTTCGATTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCWQEAA*VFRLGS
Trigger: AGACCCCAATCGAAAAACCAATGCAGCCTCTTGCCA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGACATGTTCTCATCATaGCCAACTCCAGTGATGTTT +
Preference number: 5 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLDMFSS*PTPVMF
Trigger: AAACATCACTGGAGTTGGCAATGATGAGAACATGTC...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCTCTCGGGCTGTGCGTaGGGGAGCAATCCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQLSGCA*GSNPLA
Trigger: TGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGAGAACTCATCCGAATaGGGCAAGAAGGATGGGATC +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANENSSE*GKKDGI
Trigger: GATCCCATCCTTCTTGCCCAATTCGGATGAGTTCTC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp CCTTCTTCCGCTCCAGGATCCTCTGAAAGAACTGGCTGTGGATACTaGTCAGCTCATCCAAGCAGGGGAACAGCTTTTCCACCATCTGCT +
Preference number: 5 (lower is better)
Translates to: PSSAPGSSERTGCGY*SAHPSRGTAFPPSA
Trigger: AGCAGATGGTGGAAAAGCTGTTCCCCTGCTTGGATGAGCTGATCAGTATCCACAGCCAGTTCTTTCAGAGGATCCTGGAGCGGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 90 bp GTTCAGAGCCTGCTGATTTCCAGCACTGGTTGCCAGGAACTGAGCTaGATCATACGCCTCATCCTGGACGAAATGGAAGTCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VQSLLISSTGCQELS*IIRLILDEMEVFFS
Trigger: GCTGAAGAAGACTTCCATTTCGTCCAGGATGAGGCGTATGATGCAGCTCAGTTCCTGGCAACCAGTGCTGGAAATCAGCAGGCTCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TCAGGTAGAATAATTTTCTCTGGTTCTTCTGTCTCAGCACCACACTaGCCGGTGGTGTCTTCGTGCGTCTTCTCTATCTGCGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SGRIIFSGSSVSAPH*PVVSSCVFSICGVS
Trigger: GGAGACCCCGCAGATAGAGAAGACGCACGAAGACACCACCGGGCAGTGTGGTGCTGAGACAGAAGAACCAGAGAAAATTATTCTACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CCA 90 bp TTCTGTGACCATGGCATCCTGCAGCACACTGCTCCTGCTGCTCAGTaGCTGCTGACATGTGGCTACTCCAGAATAGTTTGTTCCAGTTAC +
Preference number: 5 (lower is better)
Translates to: FCDHGILQHTAPAAQ*LLTCGYSRIVCSSY
Trigger: GTAACTGGAACAAACTATTCTGGAGTAGCCACATGTCAGCAGCCACTGAGCAGCAGGAGCAGTGTGCTGCAGGATGCCATGGTCACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp GCATTCTCTAGCTGCTTAGTCTCTGGACTGGAGAGTGACGGATTCTaGGTTTCTACTTTAGCCATCAGTGCGTTGGAGGCCCTGACTTGC +
Preference number: 5 (lower is better)
Translates to: AFSSCLVSGLESDGF*VSTLAISALEALTC
Trigger: GCAAGTCAGGGCCTCCAACGCACTGATGGCTAAAGTAGAAACCCAGAATCCGTCACTCTCCAGTCCAGAGACTAAGCAGCTAGAGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTGTGGGGCCACTTCCTaGATGTCTTTAGTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLCGATS*MSLVSV
Trigger: AACAGAAACTAAAGACATCAAGGAAGTGGCCCCACA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAACACCTGGCAGCCCACTaGGCAACAGAGATGAGCCGC +
Preference number: 5 (lower is better)
Translates to: THEASCWSHKHLLFFLNEHLAAH*ATEMSR
Trigger: GCGGCTCATCTCTGTTGCCAAGTGGGCTGCCAGGTG...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATTCCAGCGTCTCTCTCTaGCAATCAAGTGGTTCTATC +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANSSVSL*QSSGSI
Trigger: GATAGAACCACTTGATTGCAAGAGAGAGACGCTGGA...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGCATTCTGAGCTCTGTTaGGAAGCTAAGAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLHSELC*EAKRDA
Trigger: AGCATCTCTCTTAGCTTCCAAACAGAGCTCAGAATG...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGATTTGGCTGCTTCATTTaGACCTTTGCACAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RAAEASRVLRHRFCACCRFGCFI*TFAQEA
Trigger: AGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCAAA...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTTTGGCTGCTTCATTTaGACCTTTGCACAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCFGCFI*TFAQEA
Trigger: AGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCAAA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TGCTGTTGCTATGAGGGAGGCTGGGAAGAACCAGTGTGGCAGTGGGCGGGGCTAGAAATTTCCAGGTGTTaGACATGTTCTCATCATTGC +
Preference number: 5 (lower is better)
Translates to: CCCYEGGWEEPVWQWAGLEISRC*TCSHHC
Trigger: GCAATGATGAGAACATGTCAAACACCTGGAAATTTC...TAGCCCCGCCCACTGCCACACTGGTTCTTCCCAGCCTCCCTCATAGCAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGTCCTGCTCCACTTCATaGTCTTTGGTACATTGCAGT +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLSCSTS*SLVHCS
Trigger: ACTGCAATGTACCAAAGACAATGAAGTGGAGCAGGA...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAACTTTCTTCTCGTAACTaGCCACTTTGCTGTCCACGG +
Preference number: 5 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQLSSRN*PLCCPR
Trigger: CCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAG...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGTCCAATGAGCCTGATTaGGTTACAGAAGGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: SEALLGSMYLRGYITKGLSNEPD*VTEGAD
Trigger: GTCTGCACCTTCTGTAACCAAATCAGGCTCATTGGA...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAATGGGTGCGGCTTCCTTaGCTCTTCTTCTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CILPTFCRAQASGRNLRQWVRLP*LFFFFS
Trigger: GGAGAAAAAGAAGAAGAGCAAAGGAAGCCGCACCCA...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp TGCCACCTTCTCATCGAGAGAGTTCACATCTCTAGAAGGAGGTCCTaGTCGATCGAGGAACCGTGTGAAGTTCAGAGCCTGCTGATTTCC +
Preference number: 5 (lower is better)
Translates to: CHLLIERVHISRRRS*SIEEPCEVQSLLIS
Trigger: GGAAATCAGCAGGCTCTGAACTTCACACGGTTCCTCGATCGATCAGGACCTCCTTCTAGAGATGTGAACTCTCTCGATGAGAAGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp TTGCTGTCCACGGCTCCAATCACATCCTTCACCAGGCTCAAGGACTaGGTGAGGTCTTCCTGCTCCACTTCATTGTCTTTGGTACATTGC +
Preference number: 5 (lower is better)
Translates to: LLSTAPITSFTRLKD*VRSSCSTSLSLVHC
Trigger: GCAATGTACCAAAGACAATGAAGTGGAGCAGGAAGACCTCACTCAGTCCTTGAGCCTGGTGAAGGATGTGATTGGAGCCGTGGACAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS TCA 90 bp GGATTTCCACTTCATTTATTGCACTTTTCATCAGCGGTCCTCCTTTaGGAGCCTCCTCTGTGTTGGAGCGGAAGAGCACTCTCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GFPLHLLHFSSAVLL*EPPLCWSGRALSGC
Trigger: ACAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGATGAAAAGTGCAATAAATGAAGTGGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp TACCATTTCCACCCTTTTTCAGGCCGCTGTCTGACTCTGTTCTCCTaGGATCTTGGCCGTCATCACCCTCTTCTTTCTCACCTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: YHFHPFSGRCLTLFS*DLGRHHPLLSHLLW
Trigger: CCAAAGGAGGTGAGAAAGAAGAGGGTGATGACGGCCAAGATCTCAGGAGAACAGAGTCAGACAGCGGCCTGAAAAAGGGTGGAAATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp CAGAGGGACACCAGCTCATACTTCTCCTATGAATGGGAGGTCTCCTaGCAACATGCCCAAGAGCTCGCATTGAACTCCGCTGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: QRDTSSYFSYEWEVS*QHAQELALNSAGSF
Trigger: AAATGAACCAGCGGAGTTCAATGCGAGCTCTTGGGCATGTTGTCAGGAGACCTCCCATTCATAGGAGAAGTATGAGCTGGTGTCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207750.2
CDS GCA 90 bp GGTGCCTCACTGAACAGTCGCCATAAGGGATTTCATAGGATAAGCTaGTCCAGGAATCTGGCTCCCCTGCATTTTCCTCAGTCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GASLNSRHKGFHRIS*SRNLAPLHFPQSEA
Trigger: AGCTTCTGACTGAGGAAAATGCAGGGGAGCCAGATTCCTGGAGCAGCTTATCCTATGAAATCCCTTATGGCGACTGTTCAGTGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TCGCGCACCAGCTTCTTCCGTCTTAGGTCCTCCTTGGCGAACATCTaGCCACTCTTCATTCTCATGATCGACTTGCTATCTGTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: SRTSFFRLRSSLANI*PLFILMIDLLSVFV
Trigger: CACAAAGACAGATAGCAAGTCGATCATGAGAATGAAGAGTGGGCAGATGTTCGCCAAGGAGGACCTAAGACGGAAGAAGCTGGTGCGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 90 bp GTCCTGAATGATCTGAATCCAGCTATTCCGCTCCTCTCTGGAGCTTaGATGGACCTCCACCATCTCTGGATCTTTCACCCCCATACTGAT +
Preference number: 5 (lower is better)
Translates to: VLNDLNPAIPLLSGA*MDLHHLWIFHPHTD
Trigger: ATCAGTATGGGGGTGAAAGATCCAGAGATGGTGGAGGTCCATGCAAGCTCCAGAGAGGAGCGGAATAGCTGGATTCAGATCATTCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 90 bp TGGTTACTGATTCACTCTCTGGACTGCTTGCCAGAGAGAAACTGCTaGCTGGAGGTGATACCTGGTCTGGCGCTAGTTCTTTCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: WLLIHSLDCLPERNC*LEVIPGLALVLSQS
Trigger: AGACTGAGAAAGAACTAGCGCCAGACCAGGTATCACCTCCAGCCAGCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp GGCTTCCTTTGCTCTTCTTCTTTTTCTCCTTCTTTTCCTTTGGCTTaGATAACCCAAAGAGTCGGGTGGAAGTGGAGGTGCTGGACGGGG +
Preference number: 5 (lower is better)
Translates to: GFLCSSSFSPSFPLA*ITQRVGWKWRCWTG
Trigger: CCCCGTCCAGCACCTCCACTTCCACCCGACTCTTTGGGTTATCCAAGCCAAAGGAAAAGAAGGAGAAAAAGAAGAAGAGCAAAGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGCTCTGCTGTGACAGCAGGAGAAGTCAAAGCTGGACTTGGAGAAGGGAGCAATCTCAAGTCTTTCCTTaGTGCCTTCCCCTACTTGAG +
Preference number: 5 (lower is better)
Translates to: RLCCDSRRSQSWTWRREQSQVFP*CLPLLE
Trigger: CTCAAGTAGGGGAAGGCACAAAGGAAAGACTTGAGA...TTGCTCCCTTCTCCAAGTCCAGCTTTGACTTCTCCTGCTGTCACAGCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCGCATCCCATCTGAACTaGGGCCTGGCATGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: QVINKHQVTGRFLHNCSAASHLN*GLAWLN
Trigger: ATTTAACCATGCCAGGCCCAAGTTCAGATGGGATGC...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACTTCAAGTGTTGCTGTaGGGCTGGAACCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSLQVLL*GWNPPV
Trigger: AACAGGAGGGTTCCAGCCCAACAGCAACACTTGAAG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAGCCTCTATCTTTGCCATCTaGCCCCAGAGCTGTGGAACT +
Preference number: 5 (lower is better)
Translates to: QVINKHQVTGRFLHNCSASIFAI*PQSCGT
Trigger: AGTTCCACAGCTCTGGGGCAAGATGGCAAAGATAGA...GGCTGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAAGCATTGGTTTCCCCTaGGAACTGAGTATTCTCTAC +
Preference number: 5 (lower is better)
Translates to: RAAEASRVLRHRFCACCRSIGFP*ELSILY
Trigger: GTAGAGAATACTCAGTTCCAAGGGGAAACCAATGCT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAATCACTTCCTGCCGTTaGACCACATCTTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CILPTFCRAQASGRNLRQITSCR*TTSFFC
Trigger: GCAGAAGAAAGATGTGGTCAAACGGCAGGAAGTGAT...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGTGCTGTCCACAGAACTaGCCGTATGTCTTCTTTAAG +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMCCPQN*PYVFFK
Trigger: CTTAAAGAAGACATACGGCAAGTTCTGTGGACAGCA...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCCTTCTTCACAAAGGCTaGGAAACGCTTATCCTTGGT +
Preference number: 5 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCLLHKG*ETLILG
Trigger: ACCAAGGATAAGCGTTTCCAAGCCTTTGTGAAGAAG...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGTGGGTGCGGCTTCCTTaGCTCTTCTTCTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: PEWFITSVLAVAMREAGKWVRLP*LFFFFS
Trigger: GGAGAAAAAGAAGAAGAGCAAAGGAAGCCGCACCCA...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp TGTCCACGGCTCCAATCACATCCTTCACCAGGCTCAAGGACTGAGTaGGGTCTTCCTGCTCCACTTCATTGTCTTTGGTACATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: CPRLQSHPSPGSRTE*GLPAPLHCLWYIAV
Trigger: TACTGCAATGTACCAAAGACAATGAAGTGGAGCAGGAAGACCTCACTCAGTCCTTGAGCCTGGTGAAGGATGTGATTGGAGCCGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 90 bp CAAGAGAAAGTGCGTCATCTTTGGTTACTGATTCACTCTCTGGACTaGTTGCCAGAGAGAAACTGCTGGCTGGAGGTGATACCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: QEKVRHLWLLIHSLD*LPERNCWLEVIPGL
Trigger: CAGACCAGGTATCACCTCCAGCCAGCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGACGCACTTTCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TGTAAATCTCACCGAGACGCACTTTCTTCTCGTAACTTGCCACTTTaGTGTCCACGGCTCCAATCACATCCTTCACCAGGCTCAAGGACT +
Preference number: 5 (lower is better)
Translates to: CKSHRDALSSRNLPL*CPRLQSHPSPGSRT
Trigger: AGTCCTTGAGCCTGGTGAAGGATGTGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAGTGCGTCTCGGTGAGATTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 90 bp TTTGGAAGCATTCATCTGATGACAGTCAAATCCTCCAAAGGTCTCTaGTCTCCGGGGCAAAGAAATGGGCGCAGCCATGACTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: FGSIHLMTVKSSKGL*SPGQRNGRSHDFLF
Trigger: GAACAGGAAGTCATGGCTGCGCCCATTTCTTTGCCCCGGAGAGCAGAGACCTTTGGAGGATTTGACTGTCATCAGATGAATGCTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CATCCTGCAGCACACTGCTCCTGCTGCTCAGTGGCTGCTGACATGTaGCTACTCCAGAATAGTTTGTTCCAGTTACTTCGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: HPAAHCSCCSVAADM*LLQNSLFQLLRFCF
Trigger: GAAACAGAAACGAAGTAACTGGAACAAACTATTCTGGAGTAGCCACATGTCAGCAGCCACTGAGCAGCAGGAGCAGTGTGCTGCAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp TTTCTGGGTATTTTTCACAGTGTCAGAAGTGACTGTGTCAGCTTGTaGGTCTTCTGGGCAGAGGGTGGTGCAAAGTTCTTGCGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: FLGIFHSVRSDCVSL*VFWAEGGAKFLRAW
Trigger: CCAAGCACGCAAGAACTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCTGACACAGTCACTTCTGACACTGTGAAAAATACCCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp TATGCAGTAAAGAGTCACTCAGCACTTCAAGTGTTGCTGTTGGGCTaGAACCCTCCTGTTCTCCACCAATGCCTACAGGGCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: YAVKSHSALQVLLLG*NPPVLHQCLQGWYF
Trigger: GAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGGAGGGTTCCAGCCCAACAGCAACACTTGAAGTGCTGAGTGACTCTTTACTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 90 bp GAAGACTTGTTTCTCATGATGACTGTGGGCAGCGATGATGTATCGTaGGCCTGGAGGCTCCCTTTTGGCTGCTTCATTTTGACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: EDLFLMMTVGSDDVS*AWRLPFGCFILTFA
Trigger: TGCAAAGGTCAAAATGAAGCAGCCAAAAGGGAGCCTCCAGGCCCACGATACATCATCGCTGCCCACAGTCATCATGAGAAACAAGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCACGTGACCAGGAGCAATaGTCTCCAACGTATCAGAAC +
Preference number: 5 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSRDQEQ*SPTYQN
Trigger: GTTCTGATACGTTGGAGACAATTGCTCCTGGTCACG...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCTTCCTCAACCATGCTaGACAAATCACAGGAACTTT +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMLPQPC*TNHRNF
Trigger: AAAGTTCCTGTGATTTGTCAAGCATGGTTGAGGAAG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCATGTGCCTTCCCCTACTaGAGGCTTATTGTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSCAFPY*RLIVLG
Trigger: ACCCAGAACAATAAGCCTCAAGTAGGGGAAGGCACA...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGAGTGACTGTGTCAGCTaGTGGGTCTTCTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQSDCVS*WVFWAE
Trigger: CTCTGCCCAGAAGACCCACAAGCTGACACAGTCACT...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCGAAAGTGCGTCATCTTaGGTTACTGATTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCESASS*VTDSLS
Trigger: AGAGAGTGAATCAGTAACCAAAGATGACGCACTTTC...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGAAAGCCATTGGCACTTaGATGATTTCTGGATCTGTT +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLKAIGT*MISGSV
Trigger: AACAGATCCAGAAATCATCAAAGTGCCAATGGCTTT...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGACTTCAAAATTCTTTTTaGAGGGACTTGGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RAAEASRVLRHRFCACCRLQNSF*RDLEAG
Trigger: TCCTGCCTCCAAGTCCCTCAAAAAAGAATTTTGAAG...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCACTTGCTATCTGTCTTaGTGTAAATCTCACCGAGAC +
Preference number: 5 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCTCYLS*CKSHRD
Trigger: GTCTCGGTGAGATTTACACAAAGACAGATAGCAAGT...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCTCTCCTTCTTTTCCTTaGGCTTGGATAACCCAAAGA +
Preference number: 5 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCSPSFP*AWITQR
Trigger: TCTTTGGGTTATCCAAGCCAAAGGAAAAGAAGGAGA...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp CATTCCTGGTTTTTCAGTGGGGATTTCTTCAGAACTCAATGCAGGTaGAGCCTCAGCAGGAGTGTTAACACCTACGGCACTGGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: HSWFFSGDFFRTQCR*SLSRSVNTYGTGGK
Trigger: TTTGCCACCAGTGCCGTAGGTGTTAACACTCCTGCTGAGGCTTCACCTGCATTGAGTTCTGAAGAAATCCCCACTGAAAAACCAGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp GCATGCCTTCTTTTGAGGCACACTCCGTGCCCAGTCCAACATCTATaGAGCTTCTGCATTCTGAGCTCTGTTTGGAAGCTAAGAGAGATG +
Preference number: 5 (lower is better)
Translates to: ACLLLRHTPCPVQHL*SFCILSSVWKLREM
Trigger: CATCTCTCTTAGCTTCCAAACAGAGCTCAGAATGCAGAAGCTTCATAGATGTTGGACTGGGCACGGAGTGTGCCTCAAAAGAAGGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 90 bp GCTCACTCTCACTCTCTCGACTCTCAGGTGCCTCGACTCCAGGGCTaGAAAAGCCATTGGCACTTTGATGATTTCTGGATCTGTTTAACT +
Preference number: 5 (lower is better)
Translates to: AHSHSLDSQVPRLQG*KSHWHFDDFWICLT
Trigger: AGTTAAACAGATCCAGAAATCATCAAAGTGCCAATGGCTTTTTCAGCCCTGGAGTCGAGGCACCTGAGAGTCGAGAGAGTGAGAGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 90 bp GTGACATCAAAGAGTTTCTCTGTTCCTCACCACCGAAAGGGTTTCTaGGCTCGCTGGAGTTTGCAGAGCTCATTTCTAGAGACGAGGATG +
Preference number: 5 (lower is better)
Translates to: VTSKSFSVPHHRKGF*ARWSLQSSFLETRM
Trigger: CATCCTCGTCTCTAGAAATGAGCTCTGCAAACTCCAGCGAGCTCAGAAACCCTTTCGGTGGTGAGGAACAGAGAAACTCTTTGATGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 90 bp TGTTGTAGCACGACACCCTGCAGCATGCTGAGGAGTTCGTGGAGGTaGACAATGCTCTGGACAACCTGCTCACTGTTTCTTTTAAGCATA +
Preference number: 5 (lower is better)
Translates to: CCSTTPCSMLRSSWR*TMLWTTCSLFLLSI
Trigger: TATGCTTAAAAGAAACAGTGAGCAGGTTGTCCAGAGCATTGTTCACCTCCACGAACTCCTCAGCATGCTGCAGGGTGTCGTGCTACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TCCTTGATGTCTTTAGTTTCTGTTTTCAGACAGGCAGAGGGTGTGTaGTGCTGTGCTTTCTCCTCGGCACAGAGGGCTGACATAGGTTTT +
Preference number: 5 (lower is better)
Translates to: SLMSLVSVFRQAEGV*CCAFSSAQRADIGF
Trigger: AAAACCTATGTCAGCCCTCTGTGCCGAGGAGAAAGCACAGCAGCACACACCCTCTGCCTGTCTGAAAACAGAAACTAAAGACATCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 90 bp TGTCTTTGTGTAAATCTCACCGAGACGCACTTTCTTCTCGTAACTTaGCACTTTGCTGTCCACGGCTCCAATCACATCCTTCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: CLCVNLTETHFLLVT*HFAVHGSNHILHQA
Trigger: AGCCTGGTGAAGGATGTGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAGTGCGTCTCGGTGAGATTTACACAAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 90 bp AGAACTCATCCGAATTGGGCAAGAAGGATGGGATCCGCATCAGCCTaGCATGTTTATTTGAAACCTGGCAAAGGTTCTGATCCATCTGCC +
Preference number: 5 (lower is better)
Translates to: RTHPNWARRMGSASA*HVYLKPGKGSDPSA
Trigger: GGCAGATGGATCAGAACCTTTGCCAGGTTTCAAATAAACATGGCAGGCTGATGCGGATCCCATCCTTCTTGCCCAATTCGGATGAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CTTGACAAATCACAGGAACTTTCAGCCATCCTCCCAGGACTCCTTTaGCAGCACAGAGTGCTCTTAGTTTCTTCAAAAGGAGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: LDKSQELSAILPGLL*QHRVLLVSSKGGCW
Trigger: CCAGCATCCTCCTTTTGAAGAAACTAAGAGCACTCTGTGCTGCCAAAGGAGTCCTGGGAGGATGGCTGAAAGTTCCTGTGATTTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp GTGATGTTTTGTATGGAGACACTTTTAGAGAGGGAGACACTCTGCTaGGACCGTCTGTTAGTAAACATTGGTGCCGCAGTGGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: VMFCMETLLERETLC*DRLLVNIGAAVASS
Trigger: TGATGAGGCCACTGCGGCACCAATGTTTACTAACAGACGGTCCCAGCAGAGTGTCTCCCTCTCTAAAAGTGTCTCCATACAAAACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGCTACTCCAGAATAGTTaGTTCCAGTTACTTCGTTTC +
Preference number: 5 (lower is better)
Translates to: SEALLGSMYLRGYITKGLLLQNS*FQLLRF
Trigger: GAAACGAAGTAACTGGAACAAACTATTCTGGAGTAG...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAATTCTCTGGTCTTCCCTaGACATTTCTGAAGAATGCA +
Preference number: 5 (lower is better)
Translates to: CILPTFCRAQASGRNLRQFSGLP*TFLKNA
Trigger: TGCATTCTTCAGAAATGTCAAGGGAAGACCAGAGAA...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTGTGGGGCCACTTCCTaGATGTCTTTAGTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCCGATS*MSLVSV
Trigger: AACAGAAACTAAAGACATCAAGGAAGTGGCCCCACA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGAAATTGGGATGTCTTaGATACAGTGTGATGCATCC +
Preference number: 5 (lower is better)
Translates to: CILPTFCRAQASGRNLRQEIGMS*IQCDAS
Trigger: GGATGCATCACACTGTATCAAAGACATCCCAATTTC...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAAGGGCCTTGCTTCATCTaGGGTGTGGCAGCTCCATTT +
Preference number: 5 (lower is better)
Translates to: THEASCWSHKHLLFFLNEGPCFI*GVAAPF
Trigger: AAATGGAGCTGCCACACCCAAGATGAAGCAAGGCCC...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GATTTTCTGTCAGGTCTAGGTGGGAGTCAGGCTCCTCCCCTCAAGTGGAAGTGCAAGAACTGGATCCTGTaGTATCACAAAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: DFLSGLGGSQAPPLKWKCKNWIL*YHKVTA
Trigger: AGCAGTTACTTTGTGATACAACAGGATCCAGTTCTT...GCACTTCCACTTGAGGGGAGGAGCCTGACTCCCACCTAGACCTGACAGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGGAAATTTCCAGGTGTTaGACATGTTCTCATCATTGC +
Preference number: 5 (lower is better)
Translates to: SEALLGSMYLRGYITKGLEISRC*TCSHHC
Trigger: GCAATGATGAGAACATGTCAAACACCTGGAAATTTC...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGGCCCTCTGGTTGACTCATTGACCTaGCAGATTTTATTCAATGAG +
Preference number: 5 (lower is better)
Translates to: EASRVLRHRFCACCRGPLVDSLT*QILFNE
Trigger: CTCATTGAATAAAATCTGCAAGGTCAATGAGTCAAC...CAGAGGGCCTCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAACATCCCCTATCCTCTaGATGAGAAAGTTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: RAAEASRVLRHRFCACCRTSPIL*MRKFFS
Trigger: TGAAAAGAACTTTCTCATCAAGAGGATAGGGGATGT...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGCGAGGCCCTCCTGGGGAGTATGTACCTCAGAGGGTACATTACCAAAGGACTGACATCCCCTATCCTCTaGATGAGAAAGTTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SEALLGSMYLRGYITKGLTSPIL*MRKFFS
Trigger: TGAAAAGAACTTTCTCATCAAGAGGATAGGGGATGT...CAGTCCTTTGGTAATGTACCCTCTGAGGTACATACTCCCCAGGAGGGCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGCTTCTTCACAAAGGCTaGGAAACGCTTATCCTTGGT +
Preference number: 5 (lower is better)
Translates to: PEWFITSVLAVAMREAGKLLHKG*ETLILG
Trigger: ACCAAGGATAAGCGTTTCCAAGCCTTTGTGAAGAAG...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TTGATGTCTTTAGTTTCTGTTTTCAGACAGGCAGAGGGTGTGTGCTaGTGTGCTTTCTCCTCGGCACAGAGGGCTGACATAGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LMSLVSVFRQAEGVC*CAFSSAQRADIGFS
Trigger: TGAAAAACCTATGTCAGCCCTCTGTGCCGAGGAGAAAGCACAGCAGCACACACCCTCTGCCTGTCTGAAAACAGAAACTAAAGACATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 90 bp TTCTGGATCTGTTTAACTTTGAAGTCTGAGGAAGGGACACGTCACTaGCATGAGAAGAATGTCGATCCAGGGAAGCTGTGTCATCTGTGG +
Preference number: 5 (lower is better)
Translates to: FWICLTLKSEEGTRH*HEKNVDPGKLCHLW
Trigger: CCACAGATGACACAGCTTCCCTGGATCGACATTCTTCTCATGGCAGTGACGTGTCCCTTCCTCAGACTTCAAAGTTAAACAGATCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CCA 90 bp TTCCCTTTTCTTTCTGGGAGGGGACAAGAGAAAGTGCGTCATCTTTaGTTACTGATTCACTCTCTGGACTGCTTGCCAGAGAGAAACTGC +
Preference number: 5 (lower is better)
Translates to: FPFLSGRGQEKVRHL*LLIHSLDCLPERNC
Trigger: GCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGACGCACTTTCTCTTGTCCCCTCCCAGAAAGAAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp CATTGCTCTATCTTTGCCATCTTGCCCCAGAGCTGTGGAACTTTCTaGAACCACTACACTGACACCTTCTTCAGGCAGAGTAAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: HCSIFAILPQSCGTF*NHYTDTFFRQSKVR
Trigger: TCTGACTTTACTCTGCCTGAAGAAGGTGTCAGTGTAGTGGTTCCAGAAAGTTCCACAGCTCTGGGGCAAGATGGCAAAGATAGAGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS-3UTR CAA 90 bp CCTGAATGGTTCATCACATCTGTGCTTGCTGTTGCTATGAGGGAGGCTGGGAAGTGTCCACCTAAAACCTaGTTTTCTATAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PEWFITSVLAVAMREAGKCPPKT*FSIAAA
Trigger: TGCTGCTGCTATAGAAAACAAGGTTTTAGGTGGACA...CTTCCCAGCCTCCCTCATAGCAACAGCAAGCACAGATGTGATGAACCATTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTGTCCACCTAAAACCTaGTTTTCTATAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCCPPKT*FSIAAA
Trigger: TGCTGCTGCTATAGAAAACAAGGTTTTAGGTGGACA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGCATTTCCTTGATTCTTaGCATCTGAAACACAGAGAT +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMHFLDS*HLKHRD
Trigger: ATCTCTGTGTTTCAGATGCAAAGAATCAAGGAAATG...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGAAGTCAGTGACACCTTaGTCCAGGAAAGCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQKSVTP*SRKASG
Trigger: GCCAGAAGCTTTCCTGGACAAAGGTGTCACTGACTT...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTTGGATCTGTTTAACTTaGAAGTCTGAGGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCWICLT*KSEEGT
Trigger: TGTCCCTTCCTCAGACTTCAAAGTTAAACAGATCCA...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGCCAATGTAGTTAAATCCCTGTaGTTTAGACCTGTAACATGT +
Preference number: 5 (lower is better)
Translates to: LPTFCRAQASGRNLRQANVVKSL*FRPVTC
Trigger: ACATGTTACAGGTCTAAACAACAGGGATTTAACTAC...ATTGGCTTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGTAGTTAAATCCCTGTaGTTTAGACCTGTAACATGT +
Preference number: 5 (lower is better)
Translates to: RAAEASRVLRHRFCACCRVVKSL*FRPVTC
Trigger: ACATGTTACAGGTCTAAACAACAGGGATTTAACTAC...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp AGGGCAGCTGAGGCTAGCAGGGTTCTAAGGCATAGGTTCTGTGCTTGCTGCAGAGTTGACTCATTGACCTaGCAGATTTTATTCAATGAG +
Preference number: 5 (lower is better)
Translates to: RAAEASRVLRHRFCACCRVDSLT*QILFNE
Trigger: CTCATTGAATAAAATCTGCAAGGTCAATGAGTCAAC...TCTGCAGCAAGCACAGAACCTATGCCTTAGAACCCTGCTAGCCTCAGCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GCTCTGGCCTACGGGCCCAGGTTGTGTCCTTTACTAAGCCTGTGTGTACTGATGGATTCTGTTGACTCATaGACCTTGCAGATTTTATTC +
Preference number: 5 (lower is better)
Translates to: ALAYGPRLCPLLSLCVLMDSVDS*TLQILF
Trigger: GAATAAAATCTGCAAGGTCAATGAGTCAACAGAATC...CATCAGTACACACAGGCTTAGTAAAGGACACAACCTGGGCCCGTAGGCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTACTTGCTATCTGTCTTaGTGTAAATCTCACCGAGAC +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCTCYLS*CKSHRD
Trigger: GTCTCGGTGAGATTTACACAAAGACAGATAGCAAGT...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 90 bp TTTTCACAGAGTCCTGGTATCTCCTGCCCAGAGGGAGGTGTTCTCTaGTCTTCCCTTGACATTTCTGAAGAATGCACGTCTTCTTTAACT +
Preference number: 5 (lower is better)
Translates to: FSQSPGISCPEGGVL*SSLDISEECTSSLT
Trigger: AGTTAAAGAAGACGTGCATTCTTCAGAAATGTCAAGGGAAGACCAGAGAACACCTCCCTCTGGGCAGGAGATACCAGGACTCTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 90 bp GGATCTTTCACCCCCATACTGATGAGGAACAGGCCTTTCTCCTCATaGGCCACTTCTCTTACAATCAGCTTCTTTAAGGAGATCACTGTT +
Preference number: 5 (lower is better)
Translates to: GSFTPILMRNRPFSS*ATSLTISFFKEITV
Trigger: AACAGTGATCTCCTTAAAGAAGCTGATTGTAAGAGAAGTGGCCCATGAGGAGAAAGGCCTGTTCCTCATCAGTATGGGGGTGAAAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp TGTATCCTGCCCACCTTCTGTAGAGCCCAGGCCTCAGGAAGAAACCTGAGACAAGATTCTGTTGACTCATaGACCTTGCAGATTTTATTC +
Preference number: 5 (lower is better)
Translates to: CILPTFCRAQASGRNLRQDSVDS*TLQILF
Trigger: GAATAAAATCTGCAAGGTCAATGAGTCAACAGAATC...TTGTCTCAGGTTTCTTCCTGAGGCCTGGGCTCTACAGAAGGTGGGCAGGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 90 bp TCAGGCAGAGTAAAGTCAGAAACCAAAGCAGCTTTATCCACGTTATaGAGTAAAGAGTCACTCAGCACTTCAAGTGTTGCTGTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SGRVKSETKAALSTL*SKESLSTSSVAVGL
Trigger: CAGCCCAACAGCAACACTTGAAGTGCTGAGTGACTCTTTACTGCATAACGTGGATAAAGCTGCTTTGGTTTCTGACTTTACTCTGCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 90 bp TCTTCTTTAACTGAAGAACAGCTCATTGCTCTATCTTTGCCATCTTaGCCCAGAGCTGTGGAACTTTCTGGAACCACTACACTGACACCT +
Preference number: 5 (lower is better)
Translates to: SSLTEEQLIALSLPS*PRAVELSGTTTLTP
Trigger: AGGTGTCAGTGTAGTGGTTCCAGAAAGTTCCACAGCTCTGGGGCAAGATGGCAAAGATAGAGCAATGAGCTGTTCTTCAGTTAAAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 90 bp AGAAGGTCCACTTCATCTCCAGTTCTGGTGTCTGGCATTTTGCCTTaGTTACCTGGTGCTGACTCAGGTAGAATAATTTTCTCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: RRSTSSPVLVSGILP*LPGADSGRIIFSGS
Trigger: AGAACCAGAGAAAATTATTCTACCTGAGTCAGCACCAGGTAAGCAAGGCAAAATGCCAGACACCAGAACTGGAGATGAAGTGGACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166315.7
CDS CCA 90 bp GAGAAGAATGTCGATCCAGGGAAGCTGTGTCATCTGTGGAAGAACTaGATCCTGTTGTATCACAAAGTAACTGCTCTTCTTCAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: EKNVDPGKLCHLWKN*ILLYHKVTALLQAL
Trigger: CAAAGCCTGAAGAAGAGCAGTTACTTTGTGATACAACAGGATCCAGTTCTTCCACAGATGACACAGCTTCCCTGGATCGACATTCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CCA 90 bp CACTGCCATGAGAAGAATGTCGATCCAGGGAAGCTGTGTCATCTGTaGAAGAACTGGATCCTGTTGTATCACAAAGTAACTGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: HCHEKNVDPGKLCHL*KNWILLYHKVTALL
Trigger: AAGAAGAGCAGTTACTTTGTGATACAACAGGATCCAGTTCTTCCACAGATGACACAGCTTCCCTGGATCGACATTCTTCTCATGGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS-3UTR CAA 90 bp CTAGAAAGAATCACACTGGGGACAGCAGTGACGAGGCCTCTCTACTTCCTCTGTATTAATGGCATGAGATaGTCCATCTGCTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: LERITLGTAVTRPLYFLCINGMR*SICFKF
Trigger: AAACTTGAAGCAGATGGACAATCTCATGCCATTAAT...ACAGAGGAAGTAGAGAGGCCTCGTCACTGCTGTCCCCAGTGTGATTCTTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGAGCATTGGTTTCCCCTaGGAACTGAGTATTCTCTAC +
Preference number: 5 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQSIGFP*ELSILY
Trigger: GTAGAGAATACTCAGTTCCAAGGGGAAACCAATGCT...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp GTTCTTCCTAAACGAAATGAGGAATACGTACAAAGAGGGGTGGTGTGTGCACAGCATTCTGAGCTCTGTTaGGAAGCTAAGAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: VLPKRNEEYVQRGVVCAQHSELC*EAKRDA
Trigger: AGCATCTCTCTTAGCTTCCAAACAGAGCTCAGAATG...CTGTGCACACACCACCCCTCTTTGTACGTATTCCTCATTTCGTTTAGGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp CACTGGGCACACAAGACGAATCTTGTGCTGTCACCATTAATGGCATaGGATTGTCCATCTGCTTCAAGTTTGTTTTCATCAGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: HWAHKTNLVLSPLMA*DCPSASSLFSSAAV
Trigger: AACAGCAGCTGATGAAAACAAACTTGAAGCAGATGGACAATCTCATGCCATTAATGGTGACAGCACAAGATTCGTCTTGTGTGCCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp CTGTTGTATCACAAAGTAACTGCTCTTCTTCAGGCTTTGGGAAGATaGTGCTGTCCATTTCATCACTGGGTGAGTGAAAGAGGTCAGACT +
Preference number: 5 (lower is better)
Translates to: LLYHKVTALLQALGR*CCPFHHWVSERGQT
Trigger: AGTCTGACCTCTTTCACTCACCCAGTGATGAAATGGACAGCATCATCTTCCCAAAGCCTGAAGAAGAGCAGTTACTTTGTGATACAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 90 bp TTGGCACTGGTACTGTGGAAGGGCCGTGAACTGTCCAATCCAGGATaGCTGATTGTCATTAATGAGATGGATTTTGTCAATGGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LALVLWKGRELSNPG*LIVINEMDFVNGEE
Trigger: TTCTTCTCCATTGACAAAATCCATCTCATTAATGACAATCAGTCATCCTGGATTGGACAGTTCACGGCCCTTCCACAGTACCAGTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS GCA 90 bp CCAGAGGGAGGTGTTCTCTGGTCTTCCCTTGACATTTCTGAAGAATaGACGTCTTCTTTAACTGAAGAACAGCTCATTGCTCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: PEGGVLWSSLDISEE*TSSLTEEQLIALSL
Trigger: CAAAGATAGAGCAATGAGCTGTTCTTCAGTTAAAGAAGACGTGCATTCTTCAGAAATGTCAAGGGAAGACCAGAGAACACCTCCCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS-3UTR CAA 90 bp CTGCAGGTCATCAACAAGCACCAAGTTACAGGTCGGTTTCTGCACAACTGCTCAATTAATGGCATGAGATaGTCCATCTGCTTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: LQVINKHQVTGRFLHNCSINGMR*SICFKF
Trigger: AAACTTGAAGCAGATGGACAATCTCATGCCATTAAT...TGAGCAGTTGTGCAGAAACCGACCTGTAACTTGGTGCTTGTTGATGACCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS-3UTR CAA 90 bp ACACATGAGGCCTCTTGCTGGTCTCACAAACATCTGTTGTTCTTCCTAAACGAACTTCAAAATTCTTTTTaGAGGGACTTGGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: THEASCWSHKHLLFFLNELQNSF*RDLEAG
Trigger: TCCTGCCTCCAAGTCCCTCAAAAAAGAATTTTGAAG...TTCGTTTAGGAAGAACAACAGATGTTTGTGAGACCAGCAAGAGGCCTCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 90 bp ACATGGTTTGTAATATCGGCTTTCTCCATGGGTTCACTTAAAACTTaGACAGCAGTTGTTTCAGTTGTGCTACTGTCTGAATTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: TWFVISAFSMGSLKT*TAVVSVVLLSEFSS
Trigger: ACTTGAGAATTCAGACAGTAGCACAACTGAAACAACTGCTGTTCAAGTTTTAAGTGAACCCATGGAGAAAGCCGATATTACAAACCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CGCTCGGCCAGCTTGGCCTCTCGGTCTCGGAGCTCCTaGTCCCGGGCCTCCCACTCACGCTCCCGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: RSASLASRSRSS*SRASHSRSRRR
Trigger: GCGCCGCCGGGAGCGTGAGTGGGAGGCCCGGGAGCAGGAGCTCCGAGACCGAGAGGCCAAGCTGGCCGAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp AGGTCCTGCTGCCTGCGGCGGACCGTCTCTTCCCGCTCGGCCAGCTaGGCCTCTCGGTCTCGGAGCTCCTGCTCCCGGGCCTCCCACTCA +
Preference number: 6 (lower is better)
Translates to: RSCCLRRTVSSRSAS*ASRSRSSCSRASHS
Trigger: TGAGTGGGAGGCCCGGGAGCAGGAGCTCCGAGACCGAGAGGCCAAGCTGGCCGAGCGGGAAGAGACGGTCCGCCGCAGGCAGCAGGACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp TGCTGGAGCTCTTCGCGGTCCCTCTCCAGGTCCTGCTaGCTGCGGCGGACCGTCTCTTCCCGCTCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: CWSSSRSLSRSC*LRRTVSSRSAS
Trigger: GCTGGCCGAGCGGGAAGAGACGGTCCGCCGCAGGCAGCAGGACCTGGAGAGGGACCGCGAAGAGCTCCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp TTCTGCTGGAGCTCTTCGCGGTCCCTCTCCAGGTCCTaGTGCCTGCGGCGGACCGTCTCTTCCCGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: FCWSSSRSLSRS*CLRRTVSSRSA
Trigger: GGCCGAGCGGGAAGAGACGGTCCGCCGCAGGCAGCAGGACCTGGAGAGGGACCGCGAAGAGCTCCAGCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CGGGTGGAAGTGGAGGTGCTGGACGGGGCCTGGCTCTaGCCCTCGGGAACTTTTGTCTGGCTGGCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: RVEVEVLDGAWL*PSGTFVWLAEP
Trigger: GGGCTCAGCCAGCCAGACAAAAGTTCCCGAGGGGCAGAGCCAGGCCCCGTCCAGCACCTCCACTTCCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp CGCTCCAGTGCCAGGCTCACAGGCGTTGCCCCTTCCTaGTTGTGGATGCTGAGAGCTCCACGGCCACCTGGC +
Preference number: 6 (lower is better)
Translates to: RSSARLTGVAPS*LWMLRAPRPPG
Trigger: GCCAGGTGGCCGTGGAGCTCTCAGCATCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTGGCACTGGAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp CCTTTGGCTTGGATAACCCAAAGAGTCGGGTGGAAGTaGAGGTGCTGGACGGGGCCTGGCTCTGCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: PLAWITQRVGWK*RCWTGPGSAPR
Trigger: CCGAGGGGCAGAGCCAGGCCCCGTCCAGCACCTCCACTTCCACCCGACTCTTTGGGTTATCCAAGCCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CACTGCCCGGTGGTGTCTTCGTGCGTCTTCTCTATCTaGGGGGTCTCCCCAGGCAGGAAAGCGCATGCACTC +
Preference number: 6 (lower is better)
Translates to: HCPVVSSCVFSI*GVSPGRKAHAL
Trigger: GAGTGCATGCGCTTTCCTGCCTGGGGAGACCCCGCAGATAGAGAAGACGCACGAAGACACCACCGGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 72 bp TCTGTCTCAGCACCACACTGCCCGGTGGTGTCTTCGTaGGTCTTCTCTATCTGCGGGGTCTCCCCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: SVSAPHCPVVSS*VFSICGVSPGR
Trigger: CCTGCCTGGGGAGACCCCGCAGATAGAGAAGACGCACGAAGACACCACCGGGCAGTGTGGTGCTGAGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 72 bp TTGGCCAGGTCCTGGCGCTGCTTCTCCAGGCTCCGCTaGTTCTCCTGCTCAATGAGAGAGCTGGGGCGAGAT +
Preference number: 6 (lower is better)
Translates to: LARSWRCFSRLR*FSCSMRELGRD
Trigger: ATCTCGCCCCAGCTCTCTCATTGAGCAGGAGAAGCAGCGGAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp GCTTGGATAACCCAAAGAGTCGGGTGGAAGTGGAGGTaGTGGACGGGGCCTGGCTCTGCCCCTCGGGAACTT +
Preference number: 6 (lower is better)
Translates to: AWITQRVGWKWR*WTGPGSAPREL
Trigger: AAGTTCCCGAGGGGCAGAGCCAGGCCCCGTCCAGCACCTCCACTTCCACCCGACTCTTTGGGTTATCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp CGGTTGATCGCCTGGGTCCCCGGGCCTTGCTTCATCTaGGGTGTGGCAGCTCCATTTCCTACAGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RLIAWVPGPCFI*GVAAPFPTASS
Trigger: GGAGGAGGCTGTAGGAAATGGAGCTGCCACACCCAAGATGAAGCAAGGCCCGGGGACCCAGGCGATCAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CAA 72 bp TGCTGGACGGGGCCTGGCTCTGCCCCTCGGGAACTTTaGTCTGGCTGGCTGAGCCCAGTATATGGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: CWTGPGSAPREL*SGWLSPVYGKA
Trigger: GGCCTTTCCATATACTGGGCTCAGCCAGCCAGACAAAAGTTCCCGAGGGGCAGAGCCAGGCCCCGTCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp GATGCTGCTTCAGGGCAGGGCTCTATGGCACACCAGCTTTCTCGGTaGATCGCCTGGGTCCCCGGGCCTTGCTTCATCTTGGGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: DAASGQGSMAHQLSR*IAWVPGPCFILGVA
Trigger: TGCCACACCCAAGATGAAGCAAGGCCCGGGGACCCAGGCGATCAACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTGAAGCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 72 bp GTCGGGTACGCTCTGAAGGCAGCTGTCTTGATGAGATaGAGACCCGGAGTCCATGGCAGATGCTGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: VGYALKAAVLMR*RPGVHGRCWLR
Trigger: GCGGAGCCAGCATCTGCCATGGACTCCGGGTCTGCATCTCATCAAGACAGCTGCCTTCAGAGCGTACCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp TCCTCTGTGTTGGAGCGGAAGAGCACTCTCGGGCTGTaGGTTGGGGAGCAATCCTCTGGCAAGGGAGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSVLERKSTLGL*VGEQSSGKGVL
Trigger: CAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp AGTGCCAGGCTCACAGGCGTTGCCCCTTCCTTGTTGTaGATGCTGAGAGCTCCACGGCCACCTGGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SARLTGVAPSLL*MLRAPRPPGFC
Trigger: ACAGAAGCCAGGTGGCCGTGGAGCTCTCAGCATCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp GGCAGCTGTCTTGATGAGATGCAGACCCGGAGTCCATaGCAGATGCTGGCTCCGCCTCTTCCCCCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: GSCLDEMQTRSP*QMLAPPLPPFS
Trigger: GGAGAAAGGGGGAAGAGGCGGAGCCAGCATCTGCCATGGACTCCGGGTCTGCATCTCATCAAGACAGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp TCGCCTGGGTCCCCGGGCCTTGCTTCATCTTGGGTGTaGCAGCTCCATTTCCTACAGCCTCCTCCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: SPGSPGLASSWV*QLHFLQPPPQK
Trigger: CTTCTGAGGAGGAGGCTGTAGGAAATGGAGCTGCCACACCCAAGATGAAGCAAGGCCCGGGGACCCAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CCA 72 bp GGCTCTATGGCACACCAGCTTTCTCGGTTGATCGCCTaGGTCCCCGGGCCTTGCTTCATCTTGGGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: GSMAHQLSRLIA*VPGPCFILGVA
Trigger: TGCCACACCCAAGATGAAGCAAGGCCCGGGGACCCAGGCGATCAACCGAGAAAGCTGGTGTGCCATAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CCA 72 bp TGTGTTGGAGCGGAAGAGCACTCTCGGGCTGTGCGTTaGGGAGCAATCCTCTGGCAAGGGAGTGCTGCACTC +
Preference number: 6 (lower is better)
Translates to: CVGAEEHSRAVR*GAILWQGSAAL
Trigger: GAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp TCAGGGCAGGGCTCTATGGCACACCAGCTTTCTCGGTaGATCGCCTGGGTCCCCGGGCCTTGCTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: SGQGSMAHQLSR*IAWVPGPCFIL
Trigger: CAAGATGAAGCAAGGCCCGGGGACCCAGGCGATCAACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CAA 72 bp CTGTGTTGGAGCGGAAGAGCACTCTCGGGCTGTGCGTaGGGGAGCAATCCTCTGGCAAGGGAGTGCTGCACT +
Preference number: 6 (lower is better)
Translates to: LCWSGRALSGCA*GSNPLARECCT
Trigger: AGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp TCTGCCCTTCACTCCACAGTCGGGTACGCTCTGAAGGCAGCTGTCTaGATGAGATGCAGACCCGGAGTCCATGGCAGATGCTGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: SALHSTVGYALKAAV*MRCRPGVHGRCWLR
Trigger: GCGGAGCCAGCATCTGCCATGGACTCCGGGTCTGCATCTCATCAAGACAGCTGCCTTCAGAGCGTACCCGACTGTGGAGTGAAGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp GAGCCTCCTCTGTGTTGGAGCGGAAGAGCACTCTCGGGCTGTGCGTaGGGGAGCAATCCTCTGGCAAGGGAGTGCTGCACTCAGTCATGT +
Preference number: 6 (lower is better)
Translates to: EPPLCWSGRALSGCA*GSNPLARECCTQSC
Trigger: ACATGACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CATGTCAACCGCAGCAGTCCCAGCCGCACAGCAAAGTaGATCAGGGTTTCCCGAGGGCCACCGTCATGCAAA +
Preference number: 6 (lower is better)
Translates to: HVNRSSPSRTAK*IRVSRGPPSCK
Trigger: TTTGCATGACGGTGGCCCTCGGGAAACCCTGATGCACTTTGCTGTGCGGCTGGGACTGCTGCGGTTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp GTGATAACCTCGCTCCAGTGCCAGGCTCACAGGCGTTaGCCCTTCCTTGTTGTGGATGCTGAGAGCTCCACG +
Preference number: 6 (lower is better)
Translates to: VITSLQCQAHRR*PFLVVDAESST
Trigger: CGTGGAGCTCTCAGCATCCACAACAAGGAAGGGGCAACGCCTGTGAGCCTGGCACTGGAGCGAGGTTATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp GTCTTGATGAGATGCAGACCCGGAGTCCATGGCAGATaGTGGCTCCGCCTCTTCCCCCTTTCTCCCCACATC +
Preference number: 6 (lower is better)
Translates to: VLMRCRPGVHGR*WLRLFPLSPHI
Trigger: GATGTGGGGAGAAAGGGGGAAGAGGCGGAGCCAGCATCTGCCATGGACTCCGGGTCTGCATCTCATCAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp TTCATCAGCGGTCCTCCTTTGAGAGCCTCCTCTGTGTaGGAGCGGAAGAGCACTCTCGGGCTGTGCGTTGGG +
Preference number: 6 (lower is better)
Translates to: FISGPPLRASSV*ERKSTLGLCVG
Trigger: CCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp CAGCTTTCTCGGTTGATCGCCTGGGTCCCCGGGCCTTGCTTCATCTaGGGTGTGGCAGCTCCATTTCCTACAGCCTCCTCCTCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: QLSRLIAWVPGPCFI*GVAAPFPTASSSEA
Trigger: TGCTTCTGAGGAGGAGGCTGTAGGAAATGGAGCTGCCACACCCAAGATGAAGCAAGGCCCGGGGACCCAGGCGATCAACCGAGAAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS TCA 72 bp CTCAGACGCACCTGGCAGCCCACTTGGCAACAGAGATaGGCCGCTCTGCTCTGTACTCGAGGCTTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LRRTWQPTWQQR*AALLCTRGFLL
Trigger: AAGCAGAAAGCCTCGAGTACAGAGCAGAGCGGCTCATCTCTGTTGCCAAGTGGGCTGCCAGGTGCGTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 72 bp CTCGCATTGAACTCCGCTGGTTCATTTCTGCATCACTaGCTGCGTTCTTCCCAGGTCCCCAGCTGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: LALNSAGSFLHH*LRSSQVPSCAS
Trigger: GGAGGCACAGCTGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGGAGTTCAATGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp TCTTTTCCTTTGGCTTGGATAACCCAAAGAGTCGGGTaGAAGTGGAGGTGCTGGACGGGGCCTGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SFPLAWITQRVG*KWRCWTGPGSA
Trigger: GGCAGAGCCAGGCCCCGTCCAGCACCTCCACTTCCACCCGACTCTTTGGGTTATCCAAGCCAAAGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp ACCAGCTCATACTCCGCTGGTTCATTTCTGCATCACTaGCTGCGTTCTTCCCAGGTCCCCAGCTGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: TSSYSAGSFLHH*LRSSQVPSCAS
Trigger: GGAGGCACAGCTGGGGACCTGGGAAGAACGCAGCCAGTGATGCAGAAATGAACCAGCGGAGTATGAGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208708.2
CDS CAA 90 bp CTGTACTCGAGGCTTTCTGCTTTGAATCGGCAGACAGACTCGTTCTaGGTGGCACCAGGCTCTTTGCAGCCCCACCTTCAGTCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: LYSRLSALNRQTDSF*VAPGSLQPHLQSAG
Trigger: CCCTGCTGACTGAAGGTGGGGCTGCAAAGAGCCTGGTGCCACCAAGAACGAGTCTGTCTGCCGATTCAAAGCAGAAAGCCTCGAGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 90 bp GCCAAGAGGACTGCAGACCTAGGGCGCTCCTTGGGCTGTGAAGACTaGTTTCTCATGATGACTGTGGGCAGCGATGATGTATCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: AKRTADLGRSLGCED*FLMMTVGSDDVSWA
Trigger: GGCCCACGATACATCATCGCTGCCCACAGTCATCATGAGAAACAAGTCTTCACAGCCCAAGGAGCGCCCTAGGTCTGCAGTCCTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 90 bp GCAGTGGCCTCATCAGCCAAGAGGACTGCAGACCTAGGGCGCTCCTaGGGCTGTGAAGACTTGTTTCTCATGATGACTGTGGGCAGCGAT +
Preference number: 6 (lower is better)
Translates to: AVASSAKRTADLGRS*GCEDLFLMMTVGSD
Trigger: ATCGCTGCCCACAGTCATCATGAGAAACAAGTCTTCACAGCCCAAGGAGCGCCCTAGGTCTGCAGTCCTCTTGGCTGATGAGGCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 90 bp ATTGCACTTTTCATCAGCGGTCCTCCTTTGAGAGCCTCCTCTGTGTaGGAGCGGAAGAGCACTCTCGGGCTGTGCGTTGGGGAGCAATCC +
Preference number: 6 (lower is better)
Translates to: IALFISGPPLRASSV*ERKSTLGLCVGEQS
Trigger: GGATTGCTCCCCAACGCACAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGATGAAAAGTGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CAGAAGCTGGTGAAGTTCGTGATAACCTCGCTCCAGTaGCAGGCTCACAGGCGTTGCCCCTTCCTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: QKLVKFVITSLQ*QAHRRCPFLVV
Trigger: CACAACAAGGAAGGGGCAACGCCTGTGAGCCTGGCACTGGAGCGAGGTTATCACGAACTTCACCAGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp TGTGGGTCTTCTGGGCAGAGGGTGGTGCAAAGTTCTTaGGTGCTTGGCTGCACCATTGTGCTTTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: CGSSGQRVVQSS*VLGCTIVLSGR
Trigger: CCTGCCTGAAAGCACAATGGTGCAGCCAAGCACGCAAGAACTTTGCACCACCCTCTGCCCAGAAGACCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CTGTGTCAGCTTGTGGGTCTTCTGGGCAGAGGGTGGTaGAAAGTTCTTGCGTGCTTGGCTGCACCATTGTGC +
Preference number: 6 (lower is better)
Translates to: LCQLVGLLGRGW*KVLACLAAPLC
Trigger: GCACAATGGTGCAGCCAAGCACGCAAGAACTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCTGACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CCTGGCAGCCCACTTGGCAACAGAGATGAGCCGCTCTaGTCTGTACTCGAGGCTTTCTGCTTTGAATCGGCA +
Preference number: 6 (lower is better)
Translates to: PGSPLGNRDEPL*SVLEAFCFESA
Trigger: TGCCGATTCAAAGCAGAAAGCCTCGAGTACAGAGCAGAGCGGCTCATCTCTGTTGCCAAGTGGGCTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 72 bp GGCTGTGCGTTGGGGAGCAATCCTCTGGCAAGGGAGTaGTGCACTCAGTCATGTCCCGGAAAATCATCTCCT +
Preference number: 6 (lower is better)
Translates to: GCALGSNPLARE*CTQSCPGKSSP
Trigger: AGGAGATGATTTTCCGGGACATGACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CTGCTTCTCCTGCTCAATGAGAGAGCTGGGGCGAGATaGACTCCTTGTGAGGACCTTCTCTGTCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: LLLLLNERAGAR*TPCEDLLCQHQ
Trigger: CTGGTGCTGACAGAGAAGGTCCTCACAAGGAGTGCATCTCGCCCCAGCTCTCTCATTGAGCAGGAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp ATTTCCCATGCTGGTCCGAAGCTCTACAGCAGAGGATaGAGGTGGGTCAGTGGCCCCGTCTCCTACCTTATC +
Preference number: 6 (lower is better)
Translates to: ISHAGPKLYSRG*RWVSGPVSYLI
Trigger: GATAAGGTAGGAGACGGGGCCACTGACCCACCTCCATCCTCTGCTGTAGAGCTTCGGACCAGCATGGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 72 bp GGAGACACTCTGCTGGGACCGTCTGTTAGTAAACATTaGTGCCGCAGTGGCCTCATCAGCCAAGAGGACTGC +
Preference number: 6 (lower is better)
Translates to: GDTLLGPSVSKH*CRSGLISQEDC
Trigger: GCAGTCCTCTTGGCTGATGAGGCCACTGCGGCACCAATGTTTACTAACAGACGGTCCCAGCAGAGTGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 72 bp TCTGCTGGTACTTCCGAAGCAGGGCCGTCACCAGGCTaGGTGCGGCTTCCTTTGCTCTTCTTCTTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: SAGTSEAGPSPG*VRLPLLFFFFS
Trigger: GGAGAAAAAGAAGAAGAGCAAAGGAAGCCGCACCCAGCCTGGTGACGGCCCTGCTTCGGAAGTACCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp ACAGAAGGTGCAGACGGCGAGGAGAACTCATCCGAATaGGGCAAGAAGGATGGGATCCGCATCAGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: TEGADGEENSSE*GKKDGIRISLP
Trigger: TGGCAGGCTGATGCGGATCCCATCCTTCTTGCCCAATTCGGATGAGTTCTCCTCGCCGTCTGCACCTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp GGGATGGAAGCCTGTGCCACTTGCTTCATGTCAGCTTGGGGGACATaGTTATTGATCACTGAGAGCCCTGTCTCTGTGGGGAGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: GMEACATCFMSAWGT*LLITESPVSVGRSL
Trigger: CAGGGACCTCCCCACAGAGACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CAA 90 bp GATGCTGCTTCAGGGCAGGGCTCTATGGCACACCAGCTTTCTCGGTaGATCTTCAGCAACACCACATCGACAGTCCTGTCCACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: DAASGQGSMAHQLSR*IFSNTTSTVLSTLE
Trigger: CTCCAAGGTGGACAGGACTGTCGATGTGGTGTTGCTGAAGATCAACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTGAAGCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207998.2
CDS TCA 72 bp ATCAGGGTTTCCCGAGGGCCACCGTCATGCAAAGTGTaGTCTGTCCCTAACACGTTCCATTCTGCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: IRVSRGPPSCKV*SVPNTFHSAGS
Trigger: GCTGCCTGCAGAATGGAACGTGTTAGGGACAGATCACACTTTGCATGACGGTGGCCCTCGGGAAACCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp CAGGGCAGGGCTCTATGGCACACCAGCTTTCTCGGTTaGTCTTCAGCAACACCACATCGACAGTCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: QGRALWHTSFLG*SSATPHRQSCP
Trigger: TGGACAGGACTGTCGATGTGGTGTTGCTGAAGATCAACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207998.2
CDS GCA 72 bp TTGCTGTTGGGCTGGAACCCTCCTGTTCTCCACCAATaGCTACAGGGCTGGTATTTCCCATGCTGGTCCGAA +
Preference number: 6 (lower is better)
Translates to: LLLGWNPPVLHQ*LQGWYFPCWSE
Trigger: TTCGGACCAGCATGGGAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGGAGGGTTCCAGCCCAACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 72 bp AGAGGTCAGACTCACTCCCTGACACTCTCTGGAGCATaGCTTCTTTTGAGGCACACTCCGTGCCCAGTCCAA +
Preference number: 6 (lower is better)
Translates to: RGQTHSLTLSGA*LLLRHTPCPVQ
Trigger: TTGGACTGGGCACGGAGTGTGCCTCAAAAGAAGGCATGCTCCAGAGAGTGTCAGGGAGTGAGTCTGACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CCA 72 bp TGGAACCCTCCTGTTCTCCACCAATGCCTACAGGGCTaGTATTTCCCATGCTGGTCCGAAGCTCTACAGCAG +
Preference number: 6 (lower is better)
Translates to: WNPPVLHQCLQG*YFPCWSEALQQ
Trigger: CTGCTGTAGAGCTTCGGACCAGCATGGGAAATACCAGCCCTGTAGGCATTGGTGGAGAACAGGAGGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 72 bp AGGCTTTCTGCTTTGAATCGGCAGACAGACTCGTTCTaGGTGGCACCAGGCTCTTTGCAGCCCCACCTTCAG +
Preference number: 6 (lower is better)
Translates to: RLSALNRQTDSF*VAPGSLQPHLQ
Trigger: CTGAAGGTGGGGCTGCAAAGAGCCTGGTGCCACCAAGAACGAGTCTGTCTGCCGATTCAAAGCAGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 72 bp TTCTACTTTAGCCATCAGTGCGTTGGAGGCCCTGACTaGCCTGATGACGGCCTCCACTATCCTAGTGGCGGT +
Preference number: 6 (lower is better)
Translates to: FYFSHQCVGGPD*PDDGLHYPSGG
Trigger: ACCGCCACTAGGATAGTGGAGGCCGTCATCAGGCAAGTCAGGGCCTCCAACGCACTGATGGCTAAAGTAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CAA 72 bp TCAGGGCAGGGCTCTATGGCACACCAGCTTTCTCGGTaGATCTTCAGCAACACCACATCGACAGTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: SGQGSMAHQLSR*IFSNTTSTVLS
Trigger: GGACAGGACTGTCGATGTGGTGTTGCTGAAGATCAACCGAGAAAGCTGGTGTGCCATAGAGCCCTGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207998.2
CDS CAA 90 bp TGTGTCAGCTTGTGGGTCTTCTGGGCAGAGGGTGGTGCAAAGTTCTaGCGTGCTTGGCTGCACCATTGTGCTTTCAGGCAGGCTAGCTTT +
Preference number: 6 (lower is better)
Translates to: CVSLWVFWAEGGAKF*RAWLHHCAFRQASF
Trigger: AAAGCTAGCCTGCCTGAAAGCACAATGGTGCAGCCAAGCACGCAAGAACTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp GCAACAGAGATGAGCCGCTCTGCTCTGTACTCGAGGCTTTCTGCTTaGAATCGGCAGACAGACTCGTTCTTGGTGGCACCAGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: ATEMSRSALYSRLSA*NRQTDSFLVAPGSL
Trigger: CAAAGAGCCTGGTGCCACCAAGAACGAGTCTGTCTGCCGATTCAAAGCAGAAAGCCTCGAGTACAGAGCAGAGCGGCTCATCTCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 90 bp GAAGCCTGTGCCACTTGCTTCATGTCAGCTTGGGGGACATTGTTATaGATCACTGAGAGCCCTGTCTCTGTGGGGAGGTCCCTGGCAAGA +
Preference number: 6 (lower is better)
Translates to: EACATCFMSAWGTLL*ITESPVSVGRSLAR
Trigger: TCTTGCCAGGGACCTCCCCACAGAGACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS TCA 72 bp CTTCATGTCAGCTTGGGGGACATTGTTATTGATCACTaGGAGCCCTGTCTCTGTGGGGAGGTCCCTGGCAAG +
Preference number: 6 (lower is better)
Translates to: LHVSLGDIVIDH*EPCLCGEVPGK
Trigger: CTTGCCAGGGACCTCCCCACAGAGACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS TCA 72 bp CCACTTGCTTCATGTCAGCTTGGGGGACATTGTTATTaGTCACTGAGAGCCCTGTCTCTGTGGGGAGGTCCC +
Preference number: 6 (lower is better)
Translates to: PLASCQLGGHCY*SLRALSLWGGP
Trigger: GGGACCTCCCCACAGAGACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 72 bp GTTGAAGAGCTGTCTGGTAGCTCCCTTCCAGAAGAGTaGTGGCATGCATCTGGTTCTGTGACCATGGCATCC +
Preference number: 6 (lower is better)
Translates to: VEELSGSSLPEE*WHASGSVTMAS
Trigger: GGATGCCATGGTCACAGAACCAGATGCATGCCAGCACTCTTCTGGAAGGGAGCTACCAGACAGCTCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CACCGAGACGCACTTTCTTCTCGTAACTTGCCACTTTaGTGTCCACGGCTCCAATCACATCCTTCACCAGGC +
Preference number: 6 (lower is better)
Translates to: HRDALSSRNLPL*CPRLQSHPSPG
Trigger: GCCTGGTGAAGGATGTGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAGTGCGTCTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 72 bp TGTGCGTTGGGGAGCAATCCTCTGGCAAGGGAGTGCTaGACTCAGTCATGTCCCGGAAAATCATCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: CALGSNPLAREC*TQSCPGKSSPS
Trigger: AGAAGGAGATGATTTTCCGGGACATGACTGAGTGCAGCACTCCCTTGCCAGAGGATTGCTCCCCAACGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp CATGGCATCCTGCAGCACACTGCTCCTGCTGCTCAGTaGCTGCTGACATGTGGCTACTCCAGAATAGTTTGT +
Preference number: 6 (lower is better)
Translates to: HGILQHTAPAAQ*LLTCGYSRIVC
Trigger: ACAAACTATTCTGGAGTAGCCACATGTCAGCAGCCACTGAGCAGCAGGAGCAGTGTGCTGCAGGATGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp ATGAGCCGCTCTGCTCTGTACTCGAGGCTTTCTGCTTaGAATCGGCAGACAGACTCGTTCTTGGTGGCACCA +
Preference number: 6 (lower is better)
Translates to: MSRSALYSRLSA*NRQTDSFLVAP
Trigger: TGGTGCCACCAAGAACGAGTCTGTCTGCCGATTCAAAGCAGAAAGCCTCGAGTACAGAGCAGAGCGGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 72 bp GCCTGTGCCACTTGCTTCATGTCAGCTTGGGGGACATaGTTATTGATCACTGAGAGCCCTGTCTCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: ACATCFMSAWGT*LLITESPVSVG
Trigger: CCCCACAGAGACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CAA 90 bp CCACGTTATGCAGTAAAGAGTCACTCAGCACTTCAAGTGTTGCTGTaGGGCTGGAACCCTCCTGTTCTCCACCAATGCCTACAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PRYAVKSHSALQVLL*GWNPPVLHQCLQGW
Trigger: CCAGCCCTGTAGGCATTGGTGGAGAACAGGAGGGTTCCAGCCCAACAGCAACACTTGAAGTGCTGAGTGACTCTTTACTGCATAACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 90 bp AACACACTCCCGTCGCGCACCAGCTTCTTCCGTCTTAGGTCCTCCTaGGCGAACATCTGCCCACTCTTCATTCTCATGATCGACTTGCTA +
Preference number: 6 (lower is better)
Translates to: NTLPSRTSFFRLRSS*ANICPLFILMIDLL
Trigger: TAGCAAGTCGATCATGAGAATGAAGAGTGGGCAGATGTTCGCCAAGGAGGACCTAAGACGGAAGAAGCTGGTGCGCGACGGGAGTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS TCA 72 bp TGTGTGCTGCTGTGCTTTCTCCTCGGCACAGAGGGCTaGCATAGGTTTTTCACAGAGTCCTGGTATCTCCTG +
Preference number: 6 (lower is better)
Translates to: CVLLCFLLGTEG*HRFFTESWYLL
Trigger: CAGGAGATACCAGGACTCTGTGAAAAACCTATGTCAGCCCTCTGTGCCGAGGAGAAAGCACAGCAGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS TCA 72 bp CACCCTTTTTCAGGCCGCTGTCTGACTCTGTTCTCCTaGGATCTTGGCCGTCATCACCCTCTTCTTTCTCAC +
Preference number: 6 (lower is better)
Translates to: HPFSGRCLTLFS*DLGRHHPLLSH
Trigger: GTGAGAAAGAAGAGGGTGATGACGGCCAAGATCTCAGGAGAACAGAGTCAGACAGCGGCCTGAAAAAGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp AGCTGTCTTGTTGTAGCACGACACCCTGCAGCATGCTaGGGAGTTCGTGGAGGTGAACAATGCTCTGGACAA +
Preference number: 6 (lower is better)
Translates to: SCLVVARHPAAC*GVRGGEQCSGQ
Trigger: TTGTCCAGAGCATTGTTCACCTCCACGAACTCCTCAGCATGCTGCAGGGTGTCGTGCTACAACAAGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CTGCTGATTTCCAGCACTGGTTGCCAGGAACTGAGCTaGATCATACGCCTCATCCTGGACGAAATGGAAGTC +
Preference number: 6 (lower is better)
Translates to: LLISSTGCQELS*IIRLILDEMEV
Trigger: GACTTCCATTTCGTCCAGGATGAGGCGTATGATGCAGCTCAGTTCCTGGCAACCAGTGCTGGAAATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CACGTTCCATTCTGCAGGCAGCTTCAGGTGTCTGAATaGCAGTGCCACCTTCTCATCGAGAGAGTTCACATC +
Preference number: 6 (lower is better)
Translates to: HVPFCRQLQVSE*QCHLLIERVHI
Trigger: GATGTGAACTCTCTCGATGAGAAGGTGGCACTGGCATTCAGACACCTGAAGCTGCCTGCAGAATGGAACGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp GCTGACATAGGTTTTTCACAGAGTCCTGGTATCTCCTaGCCAGAGGGAGGTGTTCTCTGGTCTTCCCTTGAC +
Preference number: 6 (lower is better)
Translates to: ADIGFSQSPGIS*PEGGVLWSSLD
Trigger: GTCAAGGGAAGACCAGAGAACACCTCCCTCTGGGCAGGAGATACCAGGACTCTGTGAAAAACCTATGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 72 bp TCTTTAGTTTCTGTTTTCAGACAGGCAGAGGGTGTGTaGTGCTGTGCTTTCTCCTCGGCACAGAGGGCTGAC +
Preference number: 6 (lower is better)
Translates to: SLVSVFRQAEGV*CCAFSSAQRAD
Trigger: GTCAGCCCTCTGTGCCGAGGAGAAAGCACAGCAGCACACACCCTCTGCCTGTCTGAAAACAGAAACTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 72 bp AGTGGCATTACTTTCCTCTGCCGGGATGGAAGCCTGTaGCACTTGCTTCATGTCAGCTTGGGGGACATTGTT +
Preference number: 6 (lower is better)
Translates to: SGITFLCRDGSL*HLLHVSLGDIV
Trigger: AACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTCCATCCCGGCAGAGGAAAGTAATGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 72 bp GTAGAACTGCTTGAACCTCTTTCAGCCTTCCTGTTGTaGTCTTCAGAAACACACTCCCGTCGCGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: VELLEPLSAFLL*SSETHSRRAPA
Trigger: AGCTGGTGCGCGACGGGAGTGTGTTTCTGAAGAGCACAACAGGAAGGCTGAAAGAGGTTCAAGCAGTTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 72 bp CCCTACTTGAGGCTTATTGTTCTGGGTGGTAGCATCTaGGGTAAGCAGGCTATGTTCCAGTTCCCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: PYLRLIVLGGSI*GKQAMFQFPCL
Trigger: AAGGCAGGGGAACTGGAACATAGCCTGCTTACCCCAGATGCTACCACCCAGAACAATAAGCCTCAAGTAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp ATTCACTCTCTGGACTGCTTGCCAGAGAGAAACTGCTaGCTGGAGGTGATACCTGGTCTGGCGCTAGTTCTT +
Preference number: 6 (lower is better)
Translates to: IHSLDCLPERNC*LEVIPGLALVL
Trigger: AAGAACTAGCGCCAGACCAGGTATCACCTCCAGCCAGCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp GGGATGGAAGCCTGTGCCACTTGCTTCATGTCAGCTTaGGGGACATTGTTATTGATCACTGAGAGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: GMEACATCFMSA*GTLLLITESPV
Trigger: GACAGGGCTCTCAGTGATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CCA 72 bp AGCTGCTTAGTCTCTGGACTGGAGAGTGACGGATTCTaGGTTTCTACTTTAGCCATCAGTGCGTTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SCLVSGLESDGF*VSTLAISALEA
Trigger: GGCCTCCAACGCACTGATGGCTAAAGTAGAAACCCAGAATCCGTCACTCTCCAGTCCAGAGACTAAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CCA 72 bp TTCAGGCCGCTGTCTGACTCTGTTCTCCTGAGATCTTaGCCGTCATCACCCTCTTCTTTCTCACCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: FRPLSDSVLLRS*PSSPSSFSPPL
Trigger: CAAAGGAGGTGAGAAAGAAGAGGGTGATGACGGCCAAGATCTCAGGAGAACAGAGTCAGACAGCGGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp TCTTCAGCAACACCACATCGACAGTCCTGTCCACCTTaGAGATGTCACACAGGCTATAGCGCCTTTTGTGCC +
Preference number: 6 (lower is better)
Translates to: SSATPHRQSCPP*RCHTGYSAFCA
Trigger: GGCACAAAAGGCGCTATAGCCTGTGTGACATCTCCAAGGTGGACAGGACTGTCGATGTGGTGTTGCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207998.2
CDS CAA 72 bp ACTGCAGACCTAGGGCGCTCCTTGGGCTGTGAAGACTaGTTTCTCATGATGACTGTGGGCAGCGATGATGTA +
Preference number: 6 (lower is better)
Translates to: TADLGRSLGCED*FLMMTVGSDDV
Trigger: TACATCATCGCTGCCCACAGTCATCATGAGAAACAAGTCTTCACAGCCCAAGGAGCGCCCTAGGTCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 72 bp TCATCAGCCAAGAGGACTGCAGACCTAGGGCGCTCCTaGGGCTGTGAAGACTTGTTTCTCATGATGACTGTG +
Preference number: 6 (lower is better)
Translates to: SSAKRTADLGRS*GCEDLFLMMTV
Trigger: CACAGTCATCATGAGAAACAAGTCTTCACAGCCCAAGGAGCGCCCTAGGTCTGCAGTCCTCTTGGCTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 90 bp GAGAAAGTGCGTCATCTTTGGTTACTGATTCACTCTCTGGACTGCTaGCCAGAGAGAAACTGCTGGCTGGAGGTGATACCTGGTCTGGCG +
Preference number: 6 (lower is better)
Translates to: EKVRHLWLLIHSLDC*PERNCWLEVIPGLA
Trigger: CGCCAGACCAGGTATCACCTCCAGCCAGCAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGACGCACTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp GGAGGCAGGAAGTTACAGTTTTCTTCTGTTATACTCTCGGTCAGGTaGGCACTGGTACTGTGGAAGGGCCGTGAACTGTCCAATCCAGGA +
Preference number: 6 (lower is better)
Translates to: GGRKLQFSSVILSVR*ALVLWKGRELSNPG
Trigger: TCCTGGATTGGACAGTTCACGGCCCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTATAACAGAAGAAAACTGTAACTTCCTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CAA 90 bp AGGATTTCCACTTCATTTATTGCACTTTTCATCAGCGGTCCTCCTTaGAGAGCCTCCTCTGTGTTGGAGCGGAAGAGCACTCTCGGGCTG +
Preference number: 6 (lower is better)
Translates to: RISTSFIALFISGPP*RASSVLERKSTLGL
Trigger: CAGCCCGAGAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGATGAAAAGTGCAATAAATGAAGTGGAAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp CTCCATTTCCTACAGCCTCCTCCTCAGAAGCAGCACTaGTCCTACTCAGAAGGTCCACTTCATCTCCAGTTC +
Preference number: 6 (lower is better)
Translates to: LHFLQPPPQKQH*SYSEGPLHLQF
Trigger: GAACTGGAGATGAAGTGGACCTTCTGAGTAGGATCAGTGCTGCTTCTGAGGAGGAGGCTGTAGGAAATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS TCA 72 bp CACTCTCTCGACTCTCAGGTGCCTCGACTCCAGGGCTaGAAAAGCCATTGGCACTTTGATGATTTCTGGATC +
Preference number: 6 (lower is better)
Translates to: HSLDSQVPRLQG*KSHWHFDDFWI
Trigger: GATCCAGAAATCATCAAAGTGCCAATGGCTTTTTCAGCCCTGGAGTCGAGGCACCTGAGAGTCGAGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 72 bp AGCTCCTCAGAAAAGAGCAGTTGGCAGGCACTTCAGTaGTGCTGTCCATCTCCTCCTCTTCCATTTCACCAG +
Preference number: 6 (lower is better)
Translates to: SSSEKSSWQALQ*CCPSPPLPFHQ
Trigger: CTGGTGAAATGGAAGAGGAGGAGATGGACAGCATCACTGAAGTGCCTGCCAACTGCTCTTTTCTGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 72 bp GCTCCAGGATCCTCTGAAAGAACTGGCTGTGGATACTaGTCAGCTCATCCAAGCAGGGGAACAGCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: APGSSERTGCGY*SAHPSRGTAFP
Trigger: TGGAAAAGCTGTTCCCCTGCTTGGATGAGCTGATCAGTATCCACAGCCAGTTCTTTCAGAGGATCCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS TCA 72 bp TCCACAAGAGACTCCTTCTTCCGCTCCAGGATCCTCTaGAAGAACTGGCTGTGGATACTGATCAGCTCATCC +
Preference number: 6 (lower is better)
Translates to: STRDSFFRSRIL*KNWLWILISSS
Trigger: GGATGAGCTGATCAGTATCCACAGCCAGTTCTTTCAGAGGATCCTGGAGCGGAAGAAGGAGTCTCTTGTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS TCA 72 bp ACGGCTCCAATCACATCCTTCACCAGGCTCAAGGACTaGGTGAGGTCTTCCTGCTCCACTTCATTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: TAPITSFTRLKD*VRSSCSTSLSL
Trigger: CAAAGACAATGAAGTGGAGCAGGAAGACCTCACTCAGTCCTTGAGCCTGGTGAAGGATGTGATTGGAGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS TCA 72 bp ACCAGCTCATACTTCTCCTATGAATGGGAGGTCTCCTaGCAACATGCCCAAGAGCTCGCATTGAACTCCGCT +
Preference number: 6 (lower is better)
Translates to: TSSYFSYEWEVS*QHAQELALNSA
Trigger: AGCGGAGTTCAATGCGAGCTCTTGGGCATGTTGTCAGGAGACCTCCCATTCATAGGAGAAGTATGAGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207750.2
CDS GCA 72 bp CCATTCTGCAGGCAGCTTCAGGTGTCTGAATGCCAGTaGCACCTTCTCATCGAGAGAGTTCACATCTCTAGA +
Preference number: 6 (lower is better)
Translates to: PFCRQLQVSECQ*HLLIERVHISR
Trigger: TCTAGAGATGTGAACTCTCTCGATGAGAAGGTGGCACTGGCATTCAGACACCTGAAGCTGCCTGCAGAATGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp CAGCACAGAGTGCTCTTAGTTTCTTCAAAAGGAGGATaGTGGTGGTCAGAAGGCTCTGGTACACAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: QHRVLLVSSKGG*WWSEGSGTQGR
Trigger: CCTTCCCTGTGTACCAGAGCCTTCTGACCACCAGCATCCTCCTTTTGAAGAAACTAAGAGCACTCTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp TTAGTTTCTGTTTTCAGACAGGCAGAGGGTGTGTGCTaGTGTGCTTTCTCCTCGGCACAGAGGGCTGACATA +
Preference number: 6 (lower is better)
Translates to: LVSVFRQAEGVC*CAFSSAQRADI
Trigger: TATGTCAGCCCTCTGTGCCGAGGAGAAAGCACAGCAGCACACACCCTCTGCCTGTCTGAAAACAGAAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS GCA 72 bp ATTCATCTGATGACAGTCAAATCCTCCAAAGGTCTCTaGTCTCCGGGGCAAAGAAATGGGCGCAGCCATGAC +
Preference number: 6 (lower is better)
Translates to: IHLMTVKSSKGL*SPGQRNGRSHD
Trigger: GTCATGGCTGCGCCCATTTCTTTGCCCCGGAGAGCAGAGACCTTTGGAGGATTTGACTGTCATCAGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp GCACACTGCTCCTGCTGCTCAGTGGCTGCTGACATGTaGCTACTCCAGAATAGTTTGTTCCAGTTACTTCGT +
Preference number: 6 (lower is better)
Translates to: AHCSCCSVAADM*LLQNSLFQLLR
Trigger: ACGAAGTAACTGGAACAAACTATTCTGGAGTAGCCACATGTCAGCAGCCACTGAGCAGCAGGAGCAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp AGTCCTGGTATCTCCTGCCCAGAGGGAGGTGTTCTCTaGTCTTCCCTTGACATTTCTGAAGAATGCACGTCT +
Preference number: 6 (lower is better)
Translates to: SPGISCPEGGVL*SSLDISEECTS
Trigger: AGACGTGCATTCTTCAGAAATGTCAAGGGAAGACCAGAGAACACCTCCCTCTGGGCAGGAGATACCAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 72 bp TCTATGGAGTCTGCTCTGGTAGGCACATCTGCAGCTTaGGTTGAGACAGTAGTGGCATTACTTTCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SMESALVGTSAA*VETVVALLSSA
Trigger: GGCAGAGGAAAGTAATGCCACTACTGTCTCAACCCAAGCTGCAGATGTGCCTACCAGAGCAGACTCCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CCA 72 bp ATGATGACTGTGGGCAGCGATGATGTATCGTGGGCCTaGAGGCTCCCTTTTGGCTGCTTCATTTTGACCTTT +
Preference number: 6 (lower is better)
Translates to: MMTVGSDDVSWA*RLPFGCFILTF
Trigger: AAAGGTCAAAATGAAGCAGCCAAAAGGGAGCCTCCAGGCCCACGATACATCATCGCTGCCCACAGTCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 72 bp TTTCTCATGATGACTGTGGGCAGCGATGATGTATCGTaGGCCTGGAGGCTCCCTTTTGGCTGCTTCATTTTG +
Preference number: 6 (lower is better)
Translates to: FLMMTVGSDDVS*AWRLPFGCFIL
Trigger: CAAAATGAAGCAGCCAAAAGGGAGCCTCCAGGCCCACGATACATCATCGCTGCCCACAGTCATCATGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 72 bp TCGGGAACTTTTGTCTGGCTGGCTGAGCCCAGTATATaGAAAGGCCCCTTATCTTTCTGTGTCCGAGAGATG +
Preference number: 6 (lower is better)
Translates to: SGTFVWLAEPSI*KGPLSFCVREM
Trigger: CATCTCTCGGACACAGAAAGATAAGGGGCCTTTCCATATACTGGGCTCAGCCAGCCAGACAAAAGTTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp GGAGACACTGAGAGTTCTGAGTCCAATGAGCCTGATTaGGTTACAGAAGGTGCAGACGGCGAGGAGAACTCA +
Preference number: 6 (lower is better)
Translates to: GDTESSESNEPD*VTEGADGEENS
Trigger: TGAGTTCTCCTCGCCGTCTGCACCTTCTGTAACCAAATCAGGCTCATTGGACTCAGAACTCTCAGTGTCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp CTGTCTTTGTGTAAATCTCACCGAGACGCACTTTCTTCTCGTAACTaGCCACTTTGCTGTCCACGGCTCCAATCACATCCTTCACCAGGC +
Preference number: 6 (lower is better)
Translates to: LSLCKSHRDALSSRN*PLCCPRLQSHPSPG
Trigger: GCCTGGTGAAGGATGTGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAGTGCGTCTCGGTGAGATTTACACAAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 90 bp GATTTGGTTACAGAAGGTGCAGACGGCGAGGAGAACTCATCCGAATaGGGCAAGAAGGATGGGATCCGCATCAGCCTGCCATGTTTATTT +
Preference number: 6 (lower is better)
Translates to: DLVTEGADGEENSSE*GKKDGIRISLPCLF
Trigger: AAATAAACATGGCAGGCTGATGCGGATCCCATCCTTCTTGCCCAATTCGGATGAGTTCTCCTCGCCGTCTGCACCTTCTGTAACCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp CTCCAATCACATCCTTCACCAGGCTCAAGGACTGAGTaGGGTCTTCCTGCTCCACTTCATTGTCTTTGGTAC +
Preference number: 6 (lower is better)
Translates to: LQSHPSPGSRTE*GLPAPLHCLWY
Trigger: GTACCAAAGACAATGAAGTGGAGCAGGAAGACCTCACTCAGTCCTTGAGCCTGGTGAAGGATGTGATTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS TCA 72 bp CTTCATTTATTGCACTTTTCATCAGCGGTCCTCCTTTaGGAGCCTCCTCTGTGTTGGAGCGGAAGAGCACTC +
Preference number: 6 (lower is better)
Translates to: LHLLHFSSAVLL*EPPLCWSGRAL
Trigger: GAGTGCTCTTCCGCTCCAACACAGAGGAGGCTCTCAAAGGAGGACCGCTGATGAAAAGTGCAATAAATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp GAAGGATGGGATCCGCATCAGCCTGCCATGTTTATTTaGAACCTGGCAAAGGTTCTGATCCATCTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: EGWDPHQPAMFI*NLAKVLIHLPL
Trigger: CAGAGGCAGATGGATCAGAACCTTTGCCAGGTTTCAAATAAACATGGCAGGCTGATGCGGATCCCATCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp TTACTTTCCTCTGCCGGGATGGAAGCCTGTGCCACTTaGTTCATGTCAGCTTGGGGGACATTGTTATTGATC +
Preference number: 6 (lower is better)
Translates to: LLSSAGMEACAT*FMSAWGTLLLI
Trigger: GATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTCCATCCCGGCAGAGGAAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 72 bp ATAATTTTCTCTGGTTCTTCTGTCTCAGCACCACACTaGCCGGTGGTGTCTTCGTGCGTCTTCTCTATCTGC +
Preference number: 6 (lower is better)
Translates to: IIFSGSSVSAPH*PVVSSCVFSIC
Trigger: GCAGATAGAGAAGACGCACGAAGACACCACCGGGCAGTGTGGTGCTGAGACAGAAGAACCAGAGAAAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS GCA 72 bp CTGATATTAAAGTCAGCATTCAGGGCAGCCGAGTACTaGACACCAGAGGGACACCAGCTCATACTTCTCCTA +
Preference number: 6 (lower is better)
Translates to: LILKSAFRAAEY*TPEGHQLILLL
Trigger: TAGGAGAAGTATGAGCTGGTGTCCCTCTGGTGTGCAGTACTCGGCTGCCCTGAATGCTGACTTTAATATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207750.2
CDS CCA 72 bp CACAGGGAAGGAATAGGCCATCTGTCTCTGGTACACTaGGCACACAAGACGAATCTTGTGCTGTCACCATTA +
Preference number: 6 (lower is better)
Translates to: HREGIGHLSLVH*AHKTNLVLSPL
Trigger: TAATGGTGACAGCACAAGATTCGTCTTGTGTGCCCAGTGTACCAGAGACAGATGGCCTATTCCTTCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp CTTTCTGGGAGGGGACAAGAGAAAGTGCGTCATCTTTaGTTACTGATTCACTCTCTGGACTGCTTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: LSGRGQEKVRHL*LLIHSLDCLPE
Trigger: CTCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGACGCACTTTCTCTTGTCCCCTCCCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp AGTTTTCTTCTGTTATACTCTCGGTCAGGTTGGCACTaGTACTGTGGAAGGGCCGTGAACTGTCCAATCCAG +
Preference number: 6 (lower is better)
Translates to: SFLLLYSRSGWH*YCGRAVNCPIQ
Trigger: CTGGATTGGACAGTTCACGGCCCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTATAACAGAAGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CCA 72 bp GAGACACTGAGAGTTCTGAGTCCAATGAGCCTGATTTaGTTACAGAAGGTGCAGACGGCGAGGAGAACTCAT +
Preference number: 6 (lower is better)
Translates to: ETLRVLSPMSLI*LQKVQTARRTH
Trigger: ATGAGTTCTCCTCGCCGTCTGCACCTTCTGTAACCAAATCAGGCTCATTGGACTCAGAACTCTCAGTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp AGTTTTCTTCTGTTATACTCTCGGTCAGGTTGGCACTaGTACTGTGGAAGGGCCGTGAACTCTTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SFLLLYSRSGWH*YCGRAVNSSSS
Trigger: TGAGGAGGAAGAGTTCACGGCCCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTATAACAGAAGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239346.2
CDS CAA 72 bp GAGACTCTGAGTTCTGTTCTGGCATCCCATCTGAACTaGGGCCTGGCATGGTTAAATCCAAAGGTGATGCTG +
Preference number: 6 (lower is better)
Translates to: ETLSSVLASHLN*GLAWLNPKVML
Trigger: CAGCATCACCTTTGGATTTAACCATGCCAGGCCCAAGTTCAGATGGGATGCCAGAACAGAACTCAGAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp GGTATTTTTCACAGTGTCAGAAGTGACTGTGTCAGCTaGTGGGTCTTCTGGGCAGAGGGTGGTGCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: GIFHSVRSDCVS*WVFWAEGGAKF
Trigger: GAACTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCTGACACAGTCACTTCTGACACTGTGAAAAATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp CGTTATGCAGTAAAGAGTCACTCAGCACTTCAAGTGTaGCTGTTGGGCTGGAACCCTCCTGTTCTCCACCAA +
Preference number: 6 (lower is better)
Translates to: RYAVKSHSALQV*LLGWNPPVLHQ
Trigger: TTGGTGGAGAACAGGAGGGTTCCAGCCCAACAGCAACACTTGAAGTGCTGAGTGACTCTTTACTGCATAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 72 bp CCAACATCTATGAAGCTTCTGCATTCTGAGCTCTGTTaGGAAGCTAAGAGAGATGCTGCTTCAGGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: PTSMKLLHSELC*EAKRDAASGQG
Trigger: GCCCTGCCCTGAAGCAGCATCTCTCTTAGCTTCCAAACAGAGCTCAGAATGCAGAAGCTTCATAGATGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CAA 90 bp AGATTTCTGGGTATTTTTCACAGTGTCAGAAGTGACTGTGTCAGCTaGTGGGTCTTCTGGGCAGAGGGTGGTGCAAAGTTCTTGCGTGCT +
Preference number: 6 (lower is better)
Translates to: RFLGIFHSVRSDCVS*WVFWAEGGAKFLRA
Trigger: AGCACGCAAGAACTTTGCACCACCCTCTGCCCAGAAGACCCACAAGCTGACACAGTCACTTCTGACACTGTGAAAAATACCCAGAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp CTTTATCCACGTTATGCAGTAAAGAGTCACTCAGCACTTCAAGTGTaGCTGTTGGGCTGGAACCCTCCTGTTCTCCACCAATGCCTACAG +
Preference number: 6 (lower is better)
Translates to: LYPRYAVKSHSALQV*LLGWNPPVLHQCLQ
Trigger: CTGTAGGCATTGGTGGAGAACAGGAGGGTTCCAGCCCAACAGCAACACTTGAAGTGCTGAGTGACTCTTTACTGCATAACGTGGATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 90 bp ATCCTCCATCGCACTTCTGCTTACCTCACAAGCATTGGTTTCCCCTaGGAACTGAGTATTCTCTACGACAACATCGAGAGCAGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: ILHRTSAYLTSIGFP*ELSILYDNIESRRL
Trigger: CAGCCTTCTGCTCTCGATGTTGTCGTAGAGAATACTCAGTTCCAAGGGGAAACCAATGCTTGTGAGGTAAGCAGAAGTGCGATGGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS TCA 72 bp ATGTCCAGTACAGCTGTCTCCATGGGGTTCACGATGTaGCTCGGATTCAGAAGTCAATGTGTAGATGTCCAG +
Preference number: 6 (lower is better)
Translates to: MSSTAVSMGFTM*LGFRSQCVDVQ
Trigger: CTGGACATCTACACATTGACTTCTGAATCCGAGTCACATCGTGAACCCCATGGAGACAGCTGTACTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp GGAGGGGACAAGAGAAAGTGCGTCATCTTTGGTTACTaGTTCACTCTCTGGACTGCTTGCCAGAGAGAAACT +
Preference number: 6 (lower is better)
Translates to: GGDKRKCVIFGY*FTLWTACQRET
Trigger: AGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGACGCACTTTCTCTTGTCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp CTTTTGAGGCACACTCCGTGCCCAGTCCAACATCTATaGAGCTTCTGCATTCTGAGCTCTGTTTGGAAGCTA +
Preference number: 6 (lower is better)
Translates to: LLRHTPCPVQHL*SFCILSSVWKL
Trigger: TAGCTTCCAAACAGAGCTCAGAATGCAGAAGCTTCATAGATGTTGGACTGGGCACGGAGTGTGCCTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 72 bp AAGAGTTTCTCTGTTCCTCACCACCGAAAGGGTTTCTaGGCTCGCTGGAGTTTGCAGAGCTCATTTCTAGAG +
Preference number: 6 (lower is better)
Translates to: KSFSVPHHRKGF*ARWSLQSSFLE
Trigger: CTCTAGAAATGAGCTCTGCAAACTCCAGCGAGCTCAGAAACCCTTTCGGTGGTGAGGAACAGAGAAACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS GCA 72 bp GTAAATCTCACCGAGACGCACTTTCTTCTCGTAACTTaGCACTTTGCTGTCCACGGCTCCAATCACATCCTT +
Preference number: 6 (lower is better)
Translates to: VNLTETHFLLVT*HFAVHGSNHIL
Trigger: AAGGATGTGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAGTGCGTCTCGGTGAGATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 72 bp AGCTTCTTCCGTCTTAGGTCCTCCTTGGCGAACATCTaGCCACTCTTCATTCTCATGATCGACTTGCTATCT +
Preference number: 6 (lower is better)
Translates to: SFFRLRSSLANI*PLFILMIDLLS
Trigger: AGATAGCAAGTCGATCATGAGAATGAAGAGTGGGCAGATGTTCGCCAAGGAGGACCTAAGACGGAAGAAGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 72 bp CCGAATTGGGCAAGAAGGATGGGATCCGCATCAGCCTaGCATGTTTATTTGAAACCTGGCAAAGGTTCTGAT +
Preference number: 6 (lower is better)
Translates to: PNWARRMGSASA*HVYLKPGKGSD
Trigger: ATCAGAACCTTTGCCAGGTTTCAAATAAACATGGCAGGCTGATGCGGATCCCATCCTTCTTGCCCAATTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp AGTTACAGTTTTCTTCTGTTATACTCTCGGTCAGGTTaGCACTGGTACTGTGGAAGGGCCGTGAACTGTCCA +
Preference number: 6 (lower is better)
Translates to: SYSFLLLYSRSG*HWYCGRAVNCP
Trigger: TGGACAGTTCACGGCCCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTATAACAGAAGAAAACTGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CCA 72 bp ACCCCCATACTGATGAGGAACAGGCCTTTCTCCTCATaGGCCACTTCTCTTACAATCAGCTTCTTTAAGGAG +
Preference number: 6 (lower is better)
Translates to: TPILMRNRPFSS*ATSLTISFFKE
Trigger: CTCCTTAAAGAAGCTGATTGTAAGAGAAGTGGCCCATGAGGAGAAAGGCCTGTTCCTCATCAGTATGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 72 bp AGTTACAGTTTTCTTCTGTTATACTCTCGGTCAGGTTaGCACTGGTACTGTGGAAGGGCCGTGAACTCTTCC +
Preference number: 6 (lower is better)
Translates to: SYSFLLLYSRSG*HWYCGRAVNSS
Trigger: GGAAGAGTTCACGGCCCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTATAACAGAAGAAAACTGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239346.2
CDS CAA 72 bp ATCACAGGAACTTTCAGCCATCCTCCCAGGACTCCTTaGGCAGCACAGAGTGCTCTTAGTTTCTTCAAAAGG +
Preference number: 6 (lower is better)
Translates to: ITGTFSHPPRTP*AAQSALSFFKR
Trigger: CCTTTTGAAGAAACTAAGAGCACTCTGTGCTGCCAAAGGAGTCCTGGGAGGATGGCTGAAAGTTCCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp TCTTTCTGGGAGGGGACAAGAGAAAGTGCGTCATCTTaGGTTACTGATTCACTCTCTGGACTGCTTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SFWEGTRESASS*VTDSLSGLLAR
Trigger: TCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGACGCACTTTCTCTTGTCCCCTCCCAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp ATTACTTTCCTCTGCCGGGATGGAAGCCTGTGCCACTaGCTTCATGTCAGCTTGGGGGACATTGTTATTGAT +
Preference number: 6 (lower is better)
Translates to: ITFLCRDGSLCH*LHVSLGDIVID
Trigger: ATCAATAACAATGTCCCCCAAGCTGACATGAAGCAAGTGGCACAGGCTTCCATCCCGGCAGAGGAAAGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000208708.2
CDS CAA 72 bp AGGTCCACTTCATCTCCAGTTCTGGTGTCTGGCATTTaGCCTTGCTTACCTGGTGCTGACTCAGGTAGAATA +
Preference number: 6 (lower is better)
Translates to: RSTSSPVLVSGI*PCLPGADSGRI
Trigger: TATTCTACCTGAGTCAGCACCAGGTAAGCAAGGCAAAATGCCAGACACCAGAACTGGAGATGAAGTGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166315.7
CDS CAA 72 bp AAGTTACAGTTTTCTTCTGTTATACTCTCGGTCAGGTaGGCACTGGTACTGTGGAAGGGCCGTGAACTGTCC +
Preference number: 6 (lower is better)
Translates to: KLQFSSVILSVR*ALVLWKGRELS
Trigger: GGACAGTTCACGGCCCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTATAACAGAAGAAAACTGTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CAA 72 bp CGTTTGACCACATCTTTCTTCTGCTGTTTAAGGAACTaGCTGTCCACTGTCCGGCTCCATGACTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RLTTSFFCCLRN*LSTVRLHDSAS
Trigger: AGAAGCAGAGTCATGGAGCCGGACAGTGGACAGCAAGTTCCTTAAACAGCAGAAGAAAGATGTGGTCAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 72 bp TGTAAATCTCACCGAGACGCACTTTCTTCTCGTAACTaGCCACTTTGCTGTCCACGGCTCCAATCACATCCT +
Preference number: 6 (lower is better)
Translates to: CKSHRDALSSRN*PLCCPRLQSHP
Trigger: AGGATGTGATTGGAGCCGTGGACAGCAAAGTGGCAAGTTACGAGAAGAAAGTGCGTCTCGGTGAGATTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 90 bp TCCTGCTGCTCAGTGGCTGCTGACATGTGGCTACTCCAGAATAGTTaGTTCCAGTTACTTCGTTTCTGTTTCCACAGGATGGAAGACCTT +
Preference number: 6 (lower is better)
Translates to: SCCSVAADMWLLQNS*FQLLRFCFHRMEDL
Trigger: AAGGTCTTCCATCCTGTGGAAACAGAAACGAAGTAACTGGAACAAACTATTCTGGAGTAGCCACATGTCAGCAGCCACTGAGCAGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp GTTCCCTTTTCTTTCTGGGAGGGGACAAGAGAAAGTGCGTCATCTTaGGTTACTGATTCACTCTCTGGACTGCTTGCCAGAGAGAAACTG +
Preference number: 6 (lower is better)
Translates to: VPFSFWEGTRESASS*VTDSLSGLLAREKL
Trigger: CAGTTTCTCTCTGGCAAGCAGTCCAGAGAGTGAATCAGTAACCAAAGATGACGCACTTTCTCTTGTCCCCTCCCAGAAAGAAAAGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp ACTTCCTGCCGTTTGACCACATCTTTCTTCTGCTGTTTAAGGAACTaGCTGTCCACTGTCCGGCTCCATGACTCTGCTTCTAGCTGTTTA +
Preference number: 6 (lower is better)
Translates to: TSCRLTTSFFCCLRN*LSTVRLHDSASSCL
Trigger: TAAACAGCTAGAAGCAGAGTCATGGAGCCGGACAGTGGACAGCAAGTTCCTTAAACAGCAGAAGAAAGATGTGGTCAAACGGCAGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CAA 90 bp TTCCTTTTAGGAGACACTGAGAGTTCTGAGTCCAATGAGCCTGATTaGGTTACAGAAGGTGCAGACGGCGAGGAGAACTCATCCGAATTG +
Preference number: 6 (lower is better)
Translates to: FLLGDTESSESNEPD*VTEGADGEENSSEL
Trigger: CAATTCGGATGAGTTCTCCTCGCCGTCTGCACCTTCTGTAACCAAATCAGGCTCATTGGACTCAGAACTCTCAGTGTCTCCTAAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp TTTTTCAGTGGGGATTTCTTCAGAACTCAATGCAGGTaGAGCCTCAGCAGGAGTGTTAACACCTACGGCACT +
Preference number: 6 (lower is better)
Translates to: FFSGDFFRTQCR*SLSRSVNTYGT
Trigger: AGTGCCGTAGGTGTTAACACTCCTGCTGAGGCTTCACCTGCATTGAGTTCTGAAGAAATCCCCACTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp TGTTTAACTTTGAAGTCTGAGGAAGGGACACGTCACTaGCATGAGAAGAATGTCGATCCAGGGAAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: CLTLKSEEGTRH*HEKNVDPGKLC
Trigger: ACACAGCTTCCCTGGATCGACATTCTTCTCATGGCAGTGACGTGTCCCTTCCTCAGACTTCAAAGTTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS GCA 72 bp TTTTGTATGGAGACACTTTTAGAGAGGGAGACACTCTaGTGGGACCGTCTGTTAGTAAACATTGGTGCCGCA +
Preference number: 6 (lower is better)
Translates to: FCMETLLERETL*WDRLLVNIGAA
Trigger: TGCGGCACCAATGTTTACTAACAGACGGTCCCAGCAGAGTGTCTCCCTCTCTAAAAGTGTCTCCATACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 72 bp GGAGTGTTAACACCTACGGCACTGGTGGCAAAGACATaGTTTGTAATATCGGCTTTCTCCATGGGTTCACTT +
Preference number: 6 (lower is better)
Translates to: GVLTPTALVAKT*FVISAFSMGSL
Trigger: AAGTGAACCCATGGAGAAAGCCGATATTACAAACCATGTCTTTGCCACCAGTGCCGTAGGTGTTAACACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CCA 72 bp TCCTACCTTATCGGTATCACTCAAATCTCTTCCATCTaGGCCATCTCGACAAGCTGTAGTTCTATGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SYLIGITQISSI*AISTSCSSMEL
Trigger: CAGCTCCATAGAACTACAGCTTGTCGAGATGGCCCAGATGGAAGAGATTTGAGTGATACCGATAAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 72 bp CATCCTCCATCGCACTTCTGCTTACCTCACAAGCATTaGTTTCCCCTTGGAACTGAGTATTCTCTACGACAA +
Preference number: 6 (lower is better)
Translates to: HPPSHFCLPHKH*FPLGTEYSLRQ
Trigger: TTGTCGTAGAGAATACTCAGTTCCAAGGGGAAACCAATGCTTGTGAGGTAAGCAGAAGTGCGATGGAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CCA 72 bp CTTGGCCGTCATCACCCTCTTCTTTCTCACCTCCTTTaGAAGCATTCATCTGATGACAGTCAAATCCTCCAA +
Preference number: 6 (lower is better)
Translates to: LGRHHPLLSHLL*KHSSDDSQILQ
Trigger: TTGGAGGATTTGACTGTCATCAGATGAATGCTTCCAAAGGAGGTGAGAAAGAAGAGGGTGATGACGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp AAGTTACAGTTTTCTTCTGTTATACTCTCGGTCAGGTaGGCACTGGTACTGTGGAAGGGCCGTGAACTCTTC +
Preference number: 6 (lower is better)
Translates to: KLQFSSVILSVR*ALVLWKGRELF
Trigger: GAAGAGTTCACGGCCCTTCCACAGTACCAGTGCCAACCTGACCGAGAGTATAACAGAAGAAAACTGTAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239346.2
CDS GCA 72 bp TTGTGCTACTGTCTGAATTCTCAAGTCTTTCCTTTGTaGCTTCCCCTACTTGAGGCTTATTGTTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: LCYCLNSQVFPL*LPLLEAYCSGW
Trigger: CCACCCAGAACAATAAGCCTCAAGTAGGGGAAGGCACAAAGGAAAGACTTGAGAATTCAGACAGTAGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp GTGGAAGAACTGGATCCTGTTGTATCACAAAGTAACTaGTCTTCTTCAGGCTTTGGGAAGATGATGCTGTCC +
Preference number: 6 (lower is better)
Translates to: VEELDPVVSQSN*SSSGFGKMMLS
Trigger: GGACAGCATCATCTTCCCAAAGCCTGAAGAAGAGCAGTTACTTTGTGATACAACAGGATCCAGTTCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CCA 72 bp GTCGATCCAGGGAAGCTGTGTCATCTGTGGAAGAACTaGATCCTGTTGTATCACAAAGTAACTGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VDPGKLCHLWKN*ILLYHKVTALL
Trigger: AAGAAGAGCAGTTACTTTGTGATACAACAGGATCCAGTTCTTCCACAGATGACACAGCTTCCCTGGATCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CAA 72 bp CAGTTGTGCTACTGTCTGAATTCTCAAGTCTTTCCTTaGTGCCTTCCCCTACTTGAGGCTTATTGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: QLCYCLNSQVFP*CLPLLEAYCSG
Trigger: CCCAGAACAATAAGCCTCAAGTAGGGGAAGGCACAAAGGAAAGACTTGAGAATTCAGACAGTAGCACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp TCTGGGGTTATGACTTCCTGTAAGTCAGTGACACCTTaGTCCAGGAAAGCTTCTGGCAAACTTGGAGTCATT +
Preference number: 6 (lower is better)
Translates to: SGVMTSCKSVTP*SRKASGKLGVI
Trigger: AATGACTCCAAGTTTGCCAGAAGCTTTCCTGGACAAAGGTGTCACTGACTTACAGGAAGTCATAACCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS CAA 72 bp GGGAAGCTGTGTCATCTGTGGAAGAACTGGATCCTGTaGTATCACAAAGTAACTGCTCTTCTTCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: GKLCHLWKNWIL*YHKVTALLQAL
Trigger: CAAAGCCTGAAGAAGAGCAGTTACTTTGTGATACAACAGGATCCAGTTCTTCCACAGATGACACAGCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS TCA 72 bp ATGAGAACAGATGACATTTTCTTCCTCAACCATGCTTaGCAAATCACAGGAACTTTCAGCCATCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: MRTDDIFFLNHA*QITGTFSHPPR
Trigger: CCTGGGAGGATGGCTGAAAGTTCCTGTGATTTGTCAAGCATGGTTGAGGAAGAAAATGTCATCTGTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp CACAAAGTAACTGCTCTTCTTCAGGCTTTGGGAAGATaGTGCTGTCCATTTCATCACTGGGTGAGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: HKVTALLQALGR*CCPFHHWVSER
Trigger: TCTTTCACTCACCCAGTGATGAAATGGACAGCATCATCTTCCCAAAGCCTGAAGAAGAGCAGTTACTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CCA 72 bp GAGAAGAATGTCGATCCAGGGAAGCTGTGTCATCTGTaGAAGAACTGGATCCTGTTGTATCACAAAGTAACT +
Preference number: 6 (lower is better)
Translates to: EKNVDPGKLCHL*KNWILLYHKVT
Trigger: AGTTACTTTGTGATACAACAGGATCCAGTTCTTCCACAGATGACACAGCTTCCCTGGATCGACATTCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CAA 90 bp GGCACACAAGACGAATCTTGTGCTGTCACCATTAATGGCATGAGATaGTCCATCTGCTTCAAGTTTGTTTTCATCAGCTGCTGTTGGATA +
Preference number: 6 (lower is better)
Translates to: GTQDESCAVTINGMR*SICFKFVFISCCWI
Trigger: TATCCAACAGCAGCTGATGAAAACAAACTTGAAGCAGATGGACAATCTCATGCCATTAATGGTGACAGCACAAGATTCGTCTTGTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp GTACTGTGGAAGGGCCGTGAACTGTCCAATCCAGGATaGCTGATTGTCATTAATGAGATGGATTTTGTCAAT +
Preference number: 6 (lower is better)
Translates to: VLWKGRELSNPG*LIVINEMDFVN
Trigger: ATTGACAAAATCCATCTCATTAATGACAATCAGTCATCCTGGATTGGACAGTTCACGGCCCTTCCACAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
ENSMUST00000207998.2
ENSMUST00000208708.2
CDS CAA 72 bp GACGAATCTTGTGCTGTCACCATTAATGGCATGAGATaGTCCATCTGCTTCAAGTTTGTTTTCATCAGCTGC +
Preference number: 6 (lower is better)
Translates to: DESCAVTINGMR*SICFKFVFISC
Trigger: GCAGCTGATGAAAACAAACTTGAAGCAGATGGACAATCTCATGCCATTAATGGTGACAGCACAAGATTCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 90 bp CTTTCTCCATGGGTTCACTTAAAACTTGAACAGCAGTTGTTTCAGTaGTGCTACTGTCTGAATTCTCAAGTCTTTCCTTTGTGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: LSPWVHLKLEQQLFQ*CYCLNSQVFPLCLP
Trigger: GGGAAGGCACAAAGGAAAGACTTGAGAATTCAGACAGTAGCACAACTGAAACAACTGCTGTTCAAGTTTTAAGTGAACCCATGGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS GCA 72 bp GTAAAGTCAGAAACCAAAGCAGCTTTATCCACGTTATaGAGTAAAGAGTCACTCAGCACTTCAAGTGTTGCT +
Preference number: 6 (lower is better)
Translates to: VKSETKAALSTL*SKESLSTSSVA
Trigger: AGCAACACTTGAAGTGCTGAGTGACTCTTTACTGCATAACGTGGATAAAGCTGCTTTGGTTTCTGACTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2
CDS TCA 72 bp CACAAGACGAATCTTGTGCTGTCACCATTAATGGCATaGGATTGTCCATCTGCTTCAAGTTTGTTTTCATCA +
Preference number: 6 (lower is better)
Translates to: HKTNLVLSPLMA*DCPSASSLFSS
Trigger: TGATGAAAACAAACTTGAAGCAGATGGACAATCTCATGCCATTAATGGTGACAGCACAAGATTCGTCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS TCA 72 bp GTAATATCGGCTTTCTCCATGGGTTCACTTAAAACTTaGACAGCAGTTGTTTCAGTTGTGCTACTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: VISAFSMGSLKT*TAVVSVVLLSE
Trigger: TTCAGACAGTAGCACAACTGAAACAACTGCTGTTCAAGTTTTAAGTGAACCCATGGAGAAAGCCGATATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp CTTTCTCCATGGGTTCACTTAAAACTTGAACAGCAGTaGTTTCAGTTGTGCTACTGTCTGAATTCTCAAGTC +
Preference number: 6 (lower is better)
Translates to: LSPWVHLKLEQQ*FQLCYCLNSQV
Trigger: GACTTGAGAATTCAGACAGTAGCACAACTGAAACAACTGCTGTTCAAGTTTTAAGTGAACCCATGGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp CCTACTCCCTCATCAGTAAGGGATTCTGTTGACTCATaGACCTTGCAGATTTTATTCAATGAGTCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: PTPSSVRDSVDS*TLQILFNESVE
Trigger: TTCAACAGACTCATTGAATAAAATCTGCAAGGTCAATGAGTCAACAGAATCCCTTACTGATGAGGGAGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS TCA 72 bp ATTGCAGTATCCTTTGGAATAAAACTGGGTACTTGGTaGTCCTCTGAGTTACAAGTAAAATGCACTCTGGAA +
Preference number: 6 (lower is better)
Translates to: IAVSFGIKLGTW*SSELQVKCTLE
Trigger: TTCCAGAGTGCATTTTACTTGTAACTCAGAGGATCACCAAGTACCCAGTTTTATTCCAAAGGATACTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS GCA 72 bp GTTCACTTAAAACTTGAACAGCAGTTGTTTCAGTTGTaGTACTGTCTGAATTCTCAAGTCTTTCCTTTGTGC +
Preference number: 6 (lower is better)
Translates to: VHLKLEQQLFQL*YCLNSQVFPLC
Trigger: GCACAAAGGAAAGACTTGAGAATTCAGACAGTAGCACAACTGAAACAACTGCTGTTCAAGTTTTAAGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp TGGGTTCACTTAAAACTTGAACAGCAGTTGTTTCAGTaGTGCTACTGTCTGAATTCTCAAGTCTTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: WVHLKLEQQLFQ*CYCLNSQVFPL
Trigger: CAAAGGAAAGACTTGAGAATTCAGACAGTAGCACAACTGAAACAACTGCTGTTCAAGTTTTAAGTGAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
CDS CAA 72 bp CTTCTCTTACAATCAGCTTCTTTAAGGAGATCACTGTaGACTTATGGTCCAAGGATGCAAACACGTATTTCT +
Preference number: 6 (lower is better)
Translates to: LLLQSASLRRSL*TYGPRMQTRIS
Trigger: AGAAATACGTGTTTGCATCCTTGGACCATAAGTCAACAGTGATCTCCTTAAAGAAGCTGATTGTAAGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207239.2
ENSMUST00000207750.2
CDS CCA 72 bp AAAGCTTCTGGCAAACTTGGAGTCATTTGCTTCTCTTaGTTTAACAACTCTGAAATTGGGATGTCTTTGATA +
Preference number: 6 (lower is better)
Translates to: KASGKLGVICFS*FNNSEIGMSLI
Trigger: TATCAAAGACATCCCAATTTCAGAGTTGTTAAACCAAGAGAAGCAAATGACTCCAAGTTTGCCAGAAGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166315.7
ENSMUST00000207750.2
ENSMUST00000207923.2