Pregenerated sensors for AKAP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047804Ensembl transcript IDs: ENSMUST00000058173.12, ENSMUST00000102650.10, ENSMUST00000108710.2
Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCAACACAGTCAGGTCAATCCAAAAGCCATGCAAGAGTGTCAACTaGGGAGGTAGAGGCTGGCAGATTCCTAGGCCTTGCTGGTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: VNTVRSIQKPCKSVN*GGRGWQIPRPCWSA Trigger: GGCTGACCAGCAAGGCCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATGGCTTTTGGATTGACCTGACTGTGTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR TCA 90 bp | GGCTGTGCCACAAGTGCAAAGCCAACTAAGCAGAAGGGCAGCGAGTaGGTCTCCTACTGTCTTAAGACAGGGAGGGAAAAGGCAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: GCATSAKPTKQKGSE*VSYCLKTGREKATA Trigger: TGCAGTTGCCTTTTCCCTCCCTGTCTTAAGACAGTAGGAGACTCACTCGCTGCCCTTCTGCTTAGTTGGCTTTGCACTTGTGGCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CCA 90 bp | AGCATGTGGTCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATaGTCTAATAAGTCGCCACCACCACTTTGTATCTCGGGACTCACT | + |
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Preference number: 1 (lower is better) Translates to: SMWSLSTPVSVATGK*SNKSPPPLCISGLT Trigger: AGTGAGTCCCGAGATACAAAGTGGTGGTGGCGACTTATTAGACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR TCA 90 bp | AACATCAAGGAGATGATTCTCTCTTTCCACCATGGTTCCAGGAACTaGCTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCC | + |
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Preference number: 1 (lower is better) Translates to: NIKEMILSFHHGSRN*LNSGPSGLLAPKPS Trigger: GGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAGTCAGTTCCTGGAACCATGGTGGAAAGAGAGAATCATCTCCTTGATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| 3UTR GCA 90 bp | TCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATaGAAGAGTGTCAACTGGGGAGGTAGAGGCTGGCAGATTCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: SVYVTVNTVRSIQKP*KSVNWGGRGWQIPR Trigger: CCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR GCA 90 bp | AGTGACAGCTGTATGCAGGAAATATCAACCACAGCTGCTGCTCTCTaGATGATTATAGCCAAGACTGCTACCCTACGGAGGCCCCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: SDSCMQEISTTAAAL*MIIAKTATLRRPLY Trigger: GTACAGGGGCCTCCGTAGGGTAGCAGTCTTGGCTATAATCATGCAGAGAGCAGCAGCTGTGGTTGATATTTCCTGCATACAGCTGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR TCA 90 bp | TGGTGGAGTGTTTATAATCCCAGACAACACCCTGAGGGAGCACCCTaGGAGAATGTGTACTATGGATGTGACCATGGTCATGTTAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: WWSVYNPRQHPEGAP*ENVYYGCDHGHVKG Trigger: GCCCTTAACATGACCATGGTCACATCCATAGTACACATTCTCTCAGGGTGCTCCCTCAGGGTGTTGTCTGGGATTATAAACACTCCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR TCA 90 bp | ACAACCACTCTCGGACTGTCTCCCACTCTTCCCTGGAAACAACAGTaGTCTAGCAGTGAAAAGAAATGCAGTGCTCCGTTTTCATCGGCT | + |
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Preference number: 1 (lower is better) Translates to: TTTLGLSPTLPWKQQ*SSSEKKCSAPFSSA Trigger: AGCCGATGAAAACGGAGCACTGCATTTCTTTTCACTGCTAGATCACTGTTGTTTCCAGGGAAGAGTGGGAGACAGTCCGAGAGTGGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CCA 90 bp | CACCTCCTTGTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTaGGCTGCTAATGCATCCATCAAAGTTCACAGCCCATCTGACCCA | + |
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Preference number: 1 (lower is better) Translates to: HLLVSLCITEMLSVV*AANASIKVHSPSDP Trigger: TGGGTCAGATGGGCTGTGAACTTTGATGGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAACAAGGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCGCTGCTGGCCCACACTaGCACTTGGAGATGCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: PTHSEELGRHPQGSASVPAAGPH*HLEMLA Trigger: AGCGAGCATCTCCAAGTGGCAGTGTGGGCCAGCAGC...GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR GCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCACTCTGCTCCACAGGCTaGTGGCCCACACTGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPLCSTG*WPTLPL Trigger: AAGTGGCAGTGTGGGCCAGCAGCCTGTGGAGCAGAG...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGGCCCACACTGCCACTTaGAGATGCTCGCTCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEAHTAT*RCSLQA Trigger: TGCCTGGAGCGAGCATCTCCAAGTGGCAGTGTGGGC...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR GCA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCACGAATGGGATCTACTaGTGGCATTTGGAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EQVELTGASRVNWSGQRSTNGIY*WHLEER Trigger: CCTCTCCTCCAAATGCCAGCAGTAGATCCCATTCGT...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAGGAGTGAAGGAAAGGTaGACAGTGTGTTCTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPGVKER*TVCSVS Trigger: GCTGACAGAACACACTGTTCACCTTTCCTTCACTCC...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACAGCAGGAGCAAGGACTaGGCAAGTGGAGTTGACTGG | + |
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Preference number: 2 (lower is better) Translates to: IALLKVLSSNPSNHMMAHSRSKD*ASGVDW Trigger: CCAGTCAACTCCACTTGCTCAGTCCTTGCTCCTGCT...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCACCCTGGAAACAACAGTaGTCTAGCAGTGAAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPPWKQQ*SSSEKK Trigger: TTTCTTTTCACTGCTAGATCACTGTTGTTTCCAGGG...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR GCA 90 bp | TGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTACTGCCACTTGGAGATaGTCGCTCCAGGCAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: CKGRGHSESRLTLCLYVATATWR*SLQAGL Trigger: CAGCCCTGCCTGGAGCGAGCATCTCCAAGTGGCAGT...AGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR GCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATCAAGGAATTGTCCTCTaGTCCACAGGCTGCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: EACKGRGHSESRLTLCLYQGIVL*STGCWP Trigger: GGGCCAGCAGCCTGTGGAGCAGAGGACAATTCCTTG...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAAATGGGATCTACTGCTaGCATTTGGAGGAGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: ASPYTSLSTQSGQSKSHANGIYC*HLEERL Trigger: GAGCCTCTCCTCCAAATGCCAGCAGTAGATCCCATT...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCATGCTCCACAGGCTGCTaGCCCACACTGCCACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RQRTLRITFDSMSLCCFSCSTGC*PTLPLG Trigger: TCCAAGTGGCAGTGTGGGCCAGCAGCCTGTGGAGCA...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR CCA 90 bp | TATGAAATGGAGAGAAATGCTTTGTTAAAGGAACAGAAGAGCCACAACAGCACATCTGCTGCGAGCATGTaGTCCCTGTCTACCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: YEMERNALLKEQKSHNSTSAASM*SLSTPV Trigger: CACTGGGGTAGACAGGGACCACATGCTCGCAGCAGA...TGTGCTGTTGTGGCTCTTCTGTTCCTTTAACAAAGCATTTCTCTCCATTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CAA 90 bp | GTAACCTTGGCTGGCAGGGAATTCACTATGGAGACCAAGCTGGTCTaGAATTTACAAAGATCCATTTGTCTTGGTCTCTTGAGTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VTLAGREFTMETKLV*NLQRSICLGLLSAE Trigger: CTCAGCACTCAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGACCAGCTTGGTCTCCATAGTGAATTCCCTGCCAGCCAAGGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCATTTCCCACTCACAGTaGAGAATTGGGGAGACACCC | + |
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Preference number: 2 (lower is better) Translates to: MQRQRTLRITFDSMSLCCISHSQ*RIGETP Trigger: GGGTGTCTCCCCAATTCTTCACTGTGAGTGGGAAAT...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACACAGCTGCTGCTCTCTaGATGATTATAGCCAAGACT | + |
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Preference number: 2 (lower is better) Translates to: IALLKVLSSNPSNHMMAHTAAAL*MIIAKT Trigger: AGTCTTGGCTATAATCATGCAGAGAGCAGCAGCTGT...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACATCAACCACAGCTGCTaGTCTCTGCATGATTATAGC | + |
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Preference number: 2 (lower is better) Translates to: IALLKVLSSNPSNHMMAHINHSC*SLHDYS Trigger: GCTATAATCATGCAGAGAGCAGCAGCTGTGGTTGAT...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCGAAGCACCTCTGTCATaGTTTCTGACACAGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: MQRQRTLRITFDSMSLCCEAPLS*FLTQLR Trigger: CCTCAGCTGTGTCAGAAAGCATGACAGAGGTGCTTC...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCAATTCTGAAGAGGGAATaGAGCGTCTGGAGCATAGCG | + |
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Preference number: 2 (lower is better) Translates to: RQRTLRITFDSMSLCCFSILKRE*SVWSIA Trigger: CGCTATGCTCCAGACGCTTCATTCCCTCTTCAGAAT...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACTCAGAACCAAAGGAATaGCAATGCTTTTCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: IALLKVLSSNPSNHMMAHSEPKE*QCFSLV Trigger: GACCAAGGAAAAGCATTGCCATTCCTTTGGTTCTGA...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTGGCCACTGGAAAATaGTCTAATAAGTCGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: EACKGRGHSESRLTLCLYVATGK*SNKSPP Trigger: TGGTGGCGACTTATTAGACCATTTTCCAGTGGCCAC...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CAA 90 bp | ACCAAGCTGGTCTTGAATTTACAAAGATCCATTTGTCTTGGTCTCTaGAGTGCTGAGATTAAAGGTAGGCCACAATGCCTGGCTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TKLVLNLQRSICLGL*SAEIKGRPQCLASF Trigger: AAAGGAAGCCAGGCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGACCAGCTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| 3UTR-3UTR CCA 90 bp | TCCATTTGTCTTGGTCTCTTGAGTGCTGAGATTAAAGGTAGGCCACAATGCCTGAACTACTATATCACATaGCATGTGAAAATGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SICLGLLSAEIKGRPQCLNYYIT*HVKMLG Trigger: GCCCAGCATTTTCACATGCCATGTGATATAGTAGTT...CAGGCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCAAGACAAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| 3UTR-3UTR CCA 90 bp | TATGAAATGGAGAGAAATGCTTTGTTAAAGGAACAGAAGAGCCACAACAGCACACTCACAGTGAAGAATTaGGGAGACACCCACAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: YEMERNALLKEQKSHNSTLTVKN*GDTHKG Trigger: TCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAG...TGTGCTGTTGTGGCTCTTCTGTTCCTTTAACAAAGCATTTCTCTCCATTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR TCA 90 bp | GGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTAGACCAAGCTGGTCTTaGATTTACAAAGATCCATTT | + |
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Preference number: 2 (lower is better) Translates to: GPSGLLAPKPSFLSYLFIRPSWS*IYKDPF Trigger: AAATGGATCTTTGTAAATTCAAGACCAGCTTGGTCT...AATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTCCATGTGTATTCTaGAGAGGGAATGAAGCGTCT | + |
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Preference number: 2 (lower is better) Translates to: MQRQRTLRITFDSMSLCCFPCVF*RGNEAS Trigger: AGACGCTTCATTCCCTCTTCAGAATACACATGGAAA...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR TCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATCCCTTTTGCAAATTCTaGGCAAAAGCAATAACACCT | + |
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Preference number: 2 (lower is better) Translates to: EACKGRGHSESRLTLCLYPFCKF*AKAITP Trigger: AGGTGTTATTGCTTTTGCTCAGAATTTGCAAAAGGG...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CAA 90 bp | TTTTACCCTGAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTaGACTCTATGTCTTTATGTTGCTTTTCACTTAAAGTTTGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: FYPEACKGRGHSESR*TLCLYVAFHLKFEA Trigger: CGCTTCAAACTTTAAGTGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTCAGGGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CAA 90 bp | ATAACAGAGATGGTACATAGTACCAAAAACTTATACACAGCCTTTTaGCTTCTTCTGTTGAACAGTGTGCCTCTGTACAATCAATATTGC | + |
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Preference number: 2 (lower is better) Translates to: ITEMVHSTKNLYTAF*LLLLNSVPLYNQYC Trigger: GCAATATTGATTGTACAGAGGCACACTGTTCAACAGAAGAAGCAAAAAGGCTGTGTATAAGTTTTTGGTACTATGTACCATCTCTGTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR-3UTR CAA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAGGCCCACACTGCCACTaGGAGATGCTCGCTCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPGPHCH*EMLAPG Trigger: GCCTGGAGCGAGCATCTCCAAGTGGCAGTGTGGGCC...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CCA 72 bp | TCCTTTCTCTCTAAGCTGTTACACACAAGGAAGCACTaGCACCGTGAGGCTGGGGGAGTGTGCTTGCCAGCG | + |
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Preference number: 3 (lower is better) Translates to: SFLSKLLHTRKH*HREAGGVCLPA Trigger: CGCTGGCAAGCACACTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR TCA 72 bp | TGGAGATGCTCGCTCCAGGCAGGGCTGACTCACCTGTaGCCTCTAGGAGACAAGAATGAAGCACCTCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: WRCSLQAGLTHL*PLGDKNEAPLS Trigger: TGACAGAGGTGCTTCATTCTTGTCTCCTAGAGGTCACAGGTGAGTCAGCCCTGCCTGGAGCGAGCATCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR TCA 72 bp | AATCTGCTGCGAGCATGTGGTCCCTGTCTACCCCAGTaGGCGTGGCCACTGGAAAATGGTCTAATAAGTCGC | + |
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Preference number: 3 (lower is better) Translates to: NLLRACGPCLPQ*AWPLENGLISR Trigger: GCGACTTATTAGACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCTCGCAGCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR CCA 72 bp | GTCAGGTCAATCCAAAAGCCATGCAAGAGTGTCAACTaGGGAGGTAGAGGCTGGCAGATTCCTAGGCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: VRSIQKPCKSVN*GGRGWQIPRPC Trigger: GCAAGGCCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATGGCTTTTGGATTGACCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR TCA 72 bp | GGAGGGAAAAGGCAACTGCACATTTCCCACTCACAGTaGAGAATTGGGGAGACACCCACAAGGGAGTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GGKRQLHISHSQ*RIGETPTRECF Trigger: GAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGGAAATGTGCAGTTGCCTTTTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| 3UTR GCA 72 bp | GTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATaGAAGAGTGTCAACTGGGGAGGTAGAGGCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: VTVNTVRSIQKP*KSVNWGGRGWQ Trigger: CTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR CCA 72 bp | CTAGCCCCAGGACCCACACAAAGAATCTGGCCATGGTaGAGTGTTTATAATCCCAGACAACACCCTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LAPGPTQRIWPW*SVYNPRQHPEG Trigger: TCCCTCAGGGTGTTGTCTGGGATTATAAACACTCCACCATGGCCAGATTCTTTGTGTGGGTCCTGGGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR CCA 72 bp | GGTCTAGCCCCAGGACCCACACAAAGAATCTGGCCATaGTGGAGTGTTTATAATCCCAGACAACACCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GLAPGPTQRIWP*WSVYNPRQHPE Trigger: CTCAGGGTGTTGTCTGGGATTATAAACACTCCACCATGGCCAGATTCTTTGTGTGGGTCCTGGGGCTAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| 3UTR CCA 72 bp | TCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATaGTCTAATAAGTCGCCACCACCACTTTGTATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SLSTPVSVATGK*SNKSPPPLCIS Trigger: CGAGATACAAAGTGGTGGTGGCGACTTATTAGACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTCTCACTGTGTAACCTaGGCTGGCAGGGAATTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LNSGPSGLLAPKPSFLSYSHCVT*AGREFT Trigger: AGTGAATTCCCTGCCAGCCAAGGTTACACAGTGAGA...ATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| 3UTR GCA 72 bp | GGCTGGCGAGATGGCTCAGTGGGTAAGAGCACTGATTaGTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GWRDGSVGKSTD*SSEGSEFKSQQ Trigger: TTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAATCAGTGCTCTTACCCACTGAGCCATCTCGCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR GCA 72 bp | GAAGCGCCCTCAATGAAACAGATGAGCAGGTCAAAGTaGTCACCCTGGAAGCCTGAGGGAGGATATGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: EAPSMKQMSRSK*SPWKPEGGYEL Trigger: TAACTCATATCCTCCCTCAGGCTTCCAGGGTGAGCACTTTGACCTGCTCATCTGTTTCATTGAGGGCGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR TCA 72 bp | GGAAGGACTAGCTTTAAGGATCGATCACCTCGGGAGTaGAGGAAAGGTGAACAGTGTGTTCTGTCAGCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRTSFKDRSPRE*RKGEQCVLSAK Trigger: CTTCGCTGACAGAACACACTGTTCACCTTTCCTTCACTCCCGAGGTGATCGATCCTTAAAGCTAGTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR TCA 72 bp | ACAAGTGCAAAGCCAACTAAGCAGAAGGGCAGCGAGTaGGTCTCCTACTGTCTTAAGACAGGGAGGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSAKPTKQKGSE*VSYCLKTGREK Trigger: CTTTTCCCTCCCTGTCTTAAGACAGTAGGAGACTCACTCGCTGCCCTTCTGCTTAGTTGGCTTTGCACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR GCA 72 bp | TGTATGCAGGAAATATCAACCACAGCTGCTGCTCTCTaGATGATTATAGCCAAGACTGCTACCCTACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CMQEISTTAAAL*MIIAKTATLRR Trigger: CCTCCGTAGGGTAGCAGTCTTGGCTATAATCATGCAGAGAGCAGCAGCTGTGGTTGATATTTCCTGCATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR TCA 72 bp | GTTTATAATCCCAGACAACACCCTGAGGGAGCACCCTaGGAGAATGTGTACTATGGATGTGACCATGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VYNPRQHPEGAP*ENVYYGCDHGH Trigger: ATGACCATGGTCACATCCATAGTACACATTCTCTCAGGGTGCTCCCTCAGGGTGTTGTCTGGGATTATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR TCA 72 bp | CCCACGACTTGCCAGCTTTCTAAATTAATGCTTCTGTaGAGGAAGACTAGGCAAGGAATTGTCCTCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PTTCQLSKLMLL*RKTRQGIVLCS Trigger: GGAGCAGAGGACAATTCCTTGCCTAGTCTTCCTTCACAGAAGCATTAATTTAGAAAGCTGGCAAGTCGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR GCA 72 bp | TCCTCTGGCTTCCACACTCACACCGTGACATGTATGTaGCTGCACTCACACACACATCACACATGTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSGFHTHTVTCM*LHSHTHHTCFK Trigger: TTTAAAACATGTGTGATGTGTGTGTGAGTGCAGGCACATACATGTCACGGTGTGAGTGTGGAAGCCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR CCA 72 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTaGGCTGCTAATGCATCCATCAAAGTTCACAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VSLCITEMLSVV*AANASIKVHSP Trigger: TGGGCTGTGAACTTTGATGGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR TCA 72 bp | TTCTGTCAGCGAAGGAAAGGATGCAACACTGAGGCTTaGCCCACGACTTGCCAGCTTTCTAAATTAATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FCQRRKGCNTEA*PTTCQLSKLML Trigger: AAGCATTAATTTAGAAAGCTGGCAAGTCGTGGGTCAAGCCTCAGTGTTGCATCCTTTCCTTCGCTGACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCATCGGCTGTGTaGAAGAATCCAACCAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MQRQRTLRITFDSMSLCCFSSAV*KNPTKG Trigger: CCCTTTGGTTGGATTCTTCAACACAGCCGATGAAAA...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAATCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATTTACAAAGATCCATTaGTCTTGGTCTCTTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CESSYAHAITCIGGQMKTFTKIH*SWSLEC Trigger: GCACTCAAGAGACCAAGACAAATGGATCTTTGTAAA...TGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| 3UTR TCA 72 bp | GGTCAATATACTTCAACAGGAGAGCCAGAAATGCCCTaGAAGCAGGAAGTTGACACCATTTTAAATATAATT | + |
|
Preference number: 3 (lower is better) Translates to: GQYTSTGEPEMP*KQEVDTILNII Trigger: AATTATATTTAAAATGGTGTCAACTTCCTGCTTTCAGGGCATTTCTGGCTCTCCTGTTGAAGTATATTGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | TGCGAGCATGTGGTCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATGGTCCACAAGCAGTGGGGCTaGGCTAGAATCCCCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CEHVVPVYPSERGHWKMVHKQWG*ARIPQP Trigger: AGGTTGGGGGATTCTAGCTCAGCCCCACTGCTTGTG...GACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCTCGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCTGCCTACTGCAAGTCTaGAGGAGGAGTCCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EQVELTGASRVNWSGQRSCLLQV*RRSPGS Trigger: ACTCCCAGGACTCCTCCTCCAGACTTGCAGTAGGCA...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAGCCATCGGAACCACCTaGGTGAGACTCCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPAIGTT*VRLLRK Trigger: CTTCCTGAGGAGTCTCACTCAGGTGGTTCCGATGGC...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | CCCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCGCACTGTGGCCTTCCTaGGAAAGCAGCAAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTHSEELGRHPQGSASVPALWPS*ESSKWF Trigger: GAACCACTTGCTGCTTTCCCAGGAAGGCCACAGTGC...GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGGCCGGAAGAAGGACATaGCGGGGCCCGGGTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNNSESSKEAPSMKQMSRAGRRT*RGPGRG Trigger: GCCCCGACCCGGGCCCCGCCATGTCCTTCTTCCGGC...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | CCCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCCCTAGGTCTCCAAAATaGGCAGCCTCCATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTHSEELGRHPQGSASVPPRSPK*AASMWL Trigger: AAGCCACATGGAGGCTGCTCATTTTGGAGACCTAGG...GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | CTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATCACAAGCAGTGGGGCTaGGCTAGAATCCCCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPSGLLAPKPSFLSYHKQWG*ARIPQP Trigger: AGGTTGGGGGATTCTAGCTCAGCCCCACTGCTTGTG...ATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGGCATTGATCGCAACATaGCTTGGTCCTGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEALIAT*LGPAAS Trigger: GGAGGCTGCAGGACCAAGTCATGTTGCGATCAATGC...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCGCCGGAAGAAGGACATaGCGGGGCCCGGGTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MQRQRTLRITFDSMSLCCAGRRT*RGPGRG Trigger: GCCCCGACCCGGGCCCCGCCATGTCCTTCTTCCGGC...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAGACTTCTCTAGTGGTTaGTCATGGTGTGCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPDFSSG*SWCACC Trigger: GCAGCAGGCACACCATGATCAACCACTAGAGAAGTC...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | CCCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAGCCTCCATGTGGCTTaGCTGTTTCTTAAGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTHSEELGRHPQGSASVPSLHVA*LFLKRC Trigger: GCAACGCTTAAGAAACAGCCAAGCCACATGGAGGCT...GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCCTCATGTCTTTTAGATaGAGAGACAGGCTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQVELTGASRVNWSGQRSLMSFR*RDRLSQ Trigger: CTGGCTGAGCCTGTCTCTCCATCTAAAAGACATGAG...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | CTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTGCCTACTGCAAGTCTaGAGGAGGAGTCCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPSGLLAPKPSFLSYCLLQV*RRSPGS Trigger: ACTCCCAGGACTCCTCCTCCAGACTTGCAGTAGGCA...ATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCCCAGAACGAAACAGTTaGGATCCACCTGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQVELTGASRVNWSGQRSPERNS*DPPVHL Trigger: AAGATGGACAGGTGGATCCCAACTGTTTCGTTCTGG...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCATCATGGCATCATTCTaGGCCTCCTGTCCATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: EQVELTGASRVNWSGQRSIMASF*ASCPSY Trigger: GTATGATGGACAGGAGGCCCAGAATGATGCCATGAT...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | CATGCAAGAGTGTCAACTGGGGAGGTAGAGGCTGGCAGATTCCTAGGCCTTGCTGATCGCAACATGACTTaGTCCTGCAGCCTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HARVSTGEVEAGRFLGLADRNMT*SCSLQQ Trigger: TTGCTGGAGGCTGCAGGACCAAGTCATGTTGCGATC...AGCAAGGCCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAGACAGGCTCAGCCAGTaGACTCTGTTTCACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPDRLSQ*TLFHCV Trigger: AACACAGTGAAACAGAGTTCACTGGCTGAGCCTGTC...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | GGAGTAACATCCAAGGCTGACCTGTCCTCTGCACTTTTGAGCATGTACACACACGCCATCGGAACCACCTaGGTGAGACTCCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTSKADLSSALLSMYTHAIGTT*VRLLRK Trigger: CTTCCTGAGGAGTCTCACTCAGGTGGTTCCGATGGC...GTGTGTGTACATGCTCAAAAGTGCAGAGGACAGGTCAGCCTTGGATGTTACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | CCCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCGACTCTCGGATGAACTaGCCCAAATCACTAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTHSEELGRHPQGSASVPDSRMN*PKSLTL Trigger: GAGAGTTAGTGATTTGGGGCAGTTCATCCGAGAGTC...GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | TGCGAGCATGTGGTCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATGGTCTGGTTGATCATGGTGTaGCTGCTGCATAACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: CEHVVPVYPSERGHWKMVWLIMV*LLHNIT Trigger: AGTGATGTTATGCAGCAGGCACACCATGATCAACCA...GACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCTCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | CCCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCGGTAAACAGTCCCACTaGTCAGCACTTCAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTHSEELGRHPQGSASVPGKQSH*SALQSG Trigger: ACCAGATTGAAGTGCTGACCAGTGGGACTGTTTACC...GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGCATACTGGCCCTTTTTaGCAGCAAGCTGAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEHTGPF*QQAETG Trigger: TCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAGTATG...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR CAA 72 bp | AAAGGCAACTGCACATTTCCCACTCACAGTGAAGAATaGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGNCTFPTHSEE*GRHPQGSASVP Trigger: GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGGAAATGTGCAGTTGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTGGGCTGCTAATGCATCCCACAAGCAGTGGGGCTaGGCTAGAATCCCCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLCITEMLSVVWAANASHKQWG*ARIPQP Trigger: AGGTTGGGGGATTCTAGCTCAGCCCCACTGCTTGTG...GGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | CATGCAAGAGTGTCAACTGGGGAGGTAGAGGCTGGCAGATTCCTAGGCCTTGCTTGGCAGAAATGGCATTaGTCGCAACATGACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HARVSTGEVEAGRFLGLAWQKWH*SQHDLV Trigger: GACCAAGTCATGTTGCGATCAATGCCATTTCTGCCA...AGCAAGGCCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCATCCCATTGATAGAGTaGCATTGGCTAATACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQVELTGASRVNWSGQRSIPLIE*HWLIPE Trigger: CTCAGGTATTAGCCAATGTCACTCTATCAATGGGAT...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAATCATGGCATCATTCTaGGCCTCCTGTCCATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPIMASF*ASCPSY Trigger: GTATGATGGACAGGAGGCCCAGAATGATGCCATGAT...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCCGAAGTTCCATAAACTaGAGGAAATATGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EQVELTGASRVNWSGQRSRSSIN*RKYGRT Trigger: TGTCCTTCCATATTTCCTTCAGTTTATGGAACTTCG...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACAGGCAGACAGAGCCGTaGGCAGCCAGGGAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHRQTEP*AARETF Trigger: GAATGTTTCCCTGGCTGCTCACGGCTCTGTCTGCCT...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACTCGGAACCACCTGAGTaGGACTCCTCAGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHSEPPE*DSSGRQ Trigger: CTGCCTTCCTGAGGAGTCTCACTCAGGTGGTTCCGA...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGCCTGCATATGTCCGTTaGTATAAAGATTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEPAYVR*YKDSGS Trigger: GGACCCAGAATCTTTATATCAACGGACATATGCAGG...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | CATGCAAGAGTGTCAACTGGGGAGGTAGAGGCTGGCAGATTCCTAGGCCTTGCTCAAAATTTCACCAGGTaGTCCATTCTCCGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HARVSTGEVEAGRFLGLAQNFTR*SILRSS Trigger: GGAACTTCGGAGAATGGAGCACCTGGTGAAATTTTG...AGCAAGGCCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | GAACTGACTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTAAAGACTACAGCCTGTaGCAGAACGAAACAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELTELRSFRPAGPKAILFKDYSL*QNETVG Trigger: CCCAACTGTTTCGTTCTGGCACAGGCTGTAGTCTTT...AAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAGTCAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GAACTGACTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGGTAAACAGTCCCACTaGTCAGCACTTCAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELTELRSFRPAGPKAILFGKQSH*SALQSG Trigger: ACCAGATTGAAGTGCTGACCAGTGGGACTGTTTACC...AAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAGTCAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GAACTGACTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTATCATGGCATCATTCTaGGCCTCCTGTCCATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ELTELRSFRPAGPKAILFIMASF*ASCPSY Trigger: GTATGATGGACAGGAGGCCCAGAATGATGCCATGAT...AAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAGTCAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACGCATTGATCGCAACATaGCTTGGTCCTGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHALIAT*LGPAAS Trigger: GGAGGCTGCAGGACCAAGTCATGTTGCGATCAATGC...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR TCA 90 bp | GGAGTAACATCCAAGGCTGACCTGTCCTCTGCACTTTTGAGCATGTACACACACTGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVTSKADLSSALLSMYTHCCPAT*KGVHVG Trigger: GCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCA...GTGTGTGTACATGCTCAAAAGTGCAGAGGACAGGTCAGCCTTGGATGTTACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | CCCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCCTCAGTTACAGAAGATaGTGGAGTCTCATGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTHSEELGRHPQGSASVPLSYRR*WSLMSF Trigger: AAAAGACATGAGACTCCAGCATCTTCTGTAACTGAG...GGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | TGCGAGCATGTGGTCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATGGTCTTCTCCACAAATCTTTaGGATGATGTCGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CEHVVPVYPSERGHWKMVFSTNL*DDVVSH Trigger: ATGAGAAACGACATCATCGCAAAGATTTGTGGAGAA...GACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCTCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGCATGGCTTCTGTAATTaGTATTGGCTTAGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEHGFCN*YWLSSI Trigger: GATGCTGCTAAGCCAATACCAATTACAGAAGCCATG...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAGACAGGCTCAGCCAGTaGACTCTGTTTCACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHADRLSQ*TLFHCV Trigger: AACACAGTGAAACAGAGTTCACTGGCTGAGCCTGTC...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTAAGGCAGACAGAGCCGTaGGCAGCCAGGGAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: SFRPAGPKAILFVLFIYLRQTEP*AARETF Trigger: GAATGTTTCCCTGGCTGCTCACGGCTCTGTCTGCCT...TAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | GTGCTGAGATTAAAGGTAGGCCACAATGCCTGGCTTCCTTTTAACTACTATATCGCCATCGGAACCACCTaGGTGAGACTCCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLRLKVGHNAWLPFNYYIAIGTT*VRLLRK Trigger: CTTCCTGAGGAGTCTCACTCAGGTGGTTCCGATGGC...GATATAGTAGTTAAAAGGAAGCCAGGCATTGTGGCCTACCTTTAATCTCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| CDS-3UTR TCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAACATTGGCTAATACCTaGGCAGTGGAGCCATCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHATLANT*AVEPSE Trigger: TTCCGATGGCTCCACTGCTCAGGTATTAGCCAATGT...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGAGAAACTCACTAAAGTaGTCTTGCTCCATTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGERNSLK*SCSIAL Trigger: TAGTGCAATGGAGCAAGAGCACTTTAGTGAGTTTCT...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGAAACTGAAGGAAATATaGAAGGACAACAGTGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEKLKEI*KDNSVT Trigger: CGTGACACTGTTGTCCTTCCATATTTCCTTCAGTTT...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CCA 90 bp | CATGCAAGAGTGTCAACTGGGGAGGTAGAGGCTGGCAGATTCCTAGGCCTTGCTAAACTGAAGGAAATATaGAAGGACAACAGTGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: HARVSTGEVEAGRFLGLAKLKEI*KDNSVT Trigger: CGTGACACTGTTGTCCTTCCATATTTCCTTCAGTTT...AGCAAGGCCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CCA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGGCACTGTGGCCTTCCTaGGAAAGCAGCAAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNNSESSKEAPSMKQMSRALWPS*ESSKWF Trigger: GAACCACTTGCTGCTTTCCCAGGAAGGCCACAGTGC...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCACATACTGGCCCTTTTTaGCAGCAAGCTGAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHAHTGPF*QQAETG Trigger: TCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAGTATG...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGTCCTGTCCATCATACTaGCCCTTTTTGGCAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLLRIRHCQHSQVNPKAMSCPSY*PFLAAS Trigger: GCTTGCTGCCAAAAAGGGCCAGTATGATGGACAGGA...CATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAAGGGGGTGTGTGGCTTaGAGGGAAAAGTACTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHARGCVA*REKYLS Trigger: TGACAAGTACTTTTCCCTCCAAGCCACACACCCCCT...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAATCCAAGGGGGTGTGTaGCTTGGAGGGAAAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHAIQGGV*LGGKST Trigger: AGTACTTTTCCCTCCAAGCCACACACCCCCTTGGAT...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGCCTAGGTCTCCAAAATaGGCAGCCTCCATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNNSESSKEAPSMKQMSRPRSPK*AASMWL Trigger: AAGCCACATGGAGGCTGCTCATTTTGGAGACCTAGG...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCACCTTATTTGTTCAAGGGTCTTTaGAAGACTGGATTTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVKNWGDTHKGVLLSPPYLFKGL*KTGFGL Trigger: GAGACCAAATCCAGTCTTTCAAAGACCCTTGAACAA...ATAAGGTGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR TCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEYLQKW*LRRNSL Trigger: TAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATA...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR TCA 90 bp | CATGCAAGAGTGTCAACTGGGGAGGTAGAGGCTGGCAGATTCCTAGGCCTTGCTTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: HARVSTGEVEAGRFLGLAYLQKW*LRRNSL Trigger: TAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATA...AGCAAGGCCTAGGAATCTGCCAGCCTCTACCTCCCCAGTTGACACTCTTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR TCA 90 bp | ATCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGTCGGAACCACCTGAGTaGGACTCCTCAGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQLCTCHNMHWRSDENIKSEPPE*DSSGRQ Trigger: CTGCCTTCCTGAGGAGTCTCACTCAGGTGGTTCCGA...CTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCATCGGAACCACCTGAGTaGGACTCCTCAGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRTLRITFDSMSLCCFSSEPPE*DSSGRQ Trigger: CTGCCTTCCTGAGGAGTCTCACTCAGGTGGTTCCGA...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR TCA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAGAACATGAATCCTTTTaGTTTCTTCACATCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPEHESF*FLHIRF Trigger: GAACCTGATGTGAAGAAATCAAAAGGATTCATGTTC...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR GCA 90 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTGGGCTGCTAATGCATCCAAAGACTACAGCCTGTaGCAGAACGAAACAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLCITEMLSVVWAANASKDYSL*QNETVG Trigger: CCCAACTGTTTCGTTCTGGCACAGGCTGTAGTCTTT...GGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CCA 90 bp | GGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTAGCCTCCATGTGGCTTaGCTGTTTCTTAAGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPSGLLAPKPSFLSYLFISLHVA*LFLKRC Trigger: GCAACGCTTAAGAAACAGCCAAGCCACATGGAGGCT...AATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| CDS-3UTR CCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACAGCCTCCATGTGGCTTaGCTGTTTCTTAAGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHSLHVA*LFLKRC Trigger: GCAACGCTTAAGAAACAGCCAAGCCACATGGAGGCT...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGTTGAAAGACTGGATTTaGTCTCTTGAGTCTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGELKDWI*SLESDS Trigger: ACTATCAGACTCAAGAGACCAAATCCAGTCTTTCAA...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CCA 90 bp | TCCATTTGTCTTGGTCTCTTGAGTGCTGAGATTAAAGGTAGGCCACAATGCCTGTCCTGTCCATCATACTaGCCCTTTTTGGCAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SICLGLLSAEIKGRPQCLSCPSY*PFLAAS Trigger: GCTTGCTGCCAAAAAGGGCCAGTATGATGGACAGGA...CAGGCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCAAGACAAATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | TCACTGTGTAACCTTGGCTGGCAGGGAATTCACTATGGAGACCAAGCTGGTCTTGAAACAATTAGGAAGTaGTCCACCTTCCCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLCNLGWQGIHYGDQAGLETIRK*STFPAD Trigger: ATCTGCAGGGAAGGTGGACCACTTCCTAATTGTTTC...AAGACCAGCTTGGTCTCCATAGTGAATTCCCTGCCAGCCAAGGTTACACAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| CDS-3UTR TCA 90 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTGGGCTGCTAATGCATCCTTTTTGGCAGCAAGCTaGGACTGGAAATTATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLCITEMLSVVWAANASFLAAS*DWKLSA Trigger: AGCGGATAATTTCCAGTCTCAGCTTGCTGCCAAAAA...GGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | TATGAAATGGAGAGAAATGCTTTGTTAAAGGAACAGAAGAGCCACAACAGCACAAGGCAGACAGAGCCGTaGGCAGCCAGGGAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: YEMERNALLKEQKSHNSTRQTEP*AARETF Trigger: GAATGTTTCCCTGGCTGCTCACGGCTCTGTCTGCCT...TGTGCTGTTGTGGCTCTTCTGTTCCTTTAACAAAGCATTTCTCTCCATTTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGATTTGTAATAAAGATTaGTGGACAGAAAACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGEICNKD*WTENQA Trigger: TGCCTGGTTTTCTGTCCAGCAATCTTTATTACAAAT...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | TGTGAATCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACAGCACTGTGGCCTTCCTaGGAAAGCAGCAAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CESSYAHAITCIGGQMKTALWPS*ESSKWF Trigger: GAACCACTTGCTGCTTTCCCAGGAAGGCCACAGTGC...TGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGATTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCATGCCTACTGCAAGTCTaGAGGAGGAGTCCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQRTLRITFDSMSLCCFSCLLQV*RRSPGS Trigger: ACTCCCAGGACTCCTCCTCCAGACTTGCAGTAGGCA...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAACATCCAAGGCTGACCTGTCCTCTGCACTTTTGAGCATGTACACACACCATGGCTTCTGTAATTaGTATTGGCTTAGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GVTSKADLSSALLSMYTHHGFCN*YWLSSI Trigger: GATGCTGCTAAGCCAATACCAATTACAGAAGCCATG...GTGTGTGTACATGCTCAAAAGTGCAGAGGACAGGTCAGCCTTGGATGTTACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACGGTAAACAGTCCCACTaGTCAGCACTTCAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHGKQSH*SALQSG Trigger: ACCAGATTGAAGTGCTGACCAGTGGGACTGTTTACC...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGTCAGATGAAAACATCAAGGAGATGATTCTCTCTTTCCACCATGGTTCCATCCAAGGGGGTGTGTaGCTTGGAGGGAAAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: WRSDENIKEMILSFHHGSIQGGV*LGGKST Trigger: AGTACTTTTCCCTCCAAGCCACACACCCCCTTGGAT...GGAACCATGGTGGAAAGAGAGAATCATCTCCTTGATGTTTTCATCTGACCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAGAAACAATTAGGAAGTaGTCCACCTTCCCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHAETIRK*STFPAD Trigger: ATCTGCAGGGAAGGTGGACCACTTCCTAATTGTTTC...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACAAAAGACCTTCTCCATaGTTGTCCAGGCCTGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHKRPSP*LSRPDV Trigger: TACGTCAGGCCTGGACAACCATGGAGAAGGTCTTTT...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGTCTCCTCGAACTGAATaGATGAGATCATTCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FSLSCYTQGSTGTVRLGESPRTE*MRSFKY Trigger: ATATTTGAATGATCTCATCCATTCAGTTCGAGGAGA...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATTGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EACKGRGHSESRLTLCLYCCPAT*KGVHVG Trigger: GCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCA...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGGTGCTCTTGCTCCATTaGACTAAAGACTACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNNSESSKEAPSMKQMSRVLLLH*TKDYSL Trigger: CAGGCTGTAGTCTTTAGTGCAATGGAGCAAGAGCAC...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCACCTTATTCTAAGGTCTTCTCTTaGTCTTTACCTTTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVKNWGDTHKGVLLSPPYSKVFS*SLPFTF Trigger: GAAAGTGAAAGGTAAAGAGCAAGAGAAGACCTTAGA...ATAAGGTGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTACATACTGGCCCTTTTTaGCAGCAAGCTGAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFRPAGPKAILFVLFIYLHTGPF*QQAETG Trigger: TCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAGTATG...TAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | CATGTCTATGTCTACACCCAAACACAAGGCTATGTCCAATTGGGGATTATGTTCTCCTGTCCATCATACTaGCCCTTTTTGGCAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVYVYTQTQGYVQLGIMFSCPSY*PFLAAS Trigger: GCTTGCTGCCAAAAAGGGCCAGTATGATGGACAGGA...GAACATAATCCCCAATTGGACATAGCCTTGTGTTTGGGTGTAGACATAGACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTAAGGGGGTGTGTGGCTTaGAGGGAAAAGTACTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFRPAGPKAILFVLFIYLRGCVA*REKYLS Trigger: TGACAAGTACTTTTCCCTCCAAGCCACACACCCCCT...TAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | CATGTCTATGTCTACACCCAAACACAAGGCTATGTCCAATTGGGGATTATGTTCATCCAAGGGGGTGTGTaGCTTGGAGGGAAAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HVYVYTQTQGYVQLGIMFIQGGV*LGGKST Trigger: AGTACTTTTCCCTCCAAGCCACACACCCCCTTGGAT...GAACATAATCCCCAATTGGACATAGCCTTGTGTTTGGGTGTAGACATAGACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCAGATCGCAACATGACTTaGTCCTGCAGCCTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQRTLRITFDSMSLCCFSDRNMT*SCSLQQ Trigger: TTGCTGGAGGCTGCAGGACCAAGTCATGTTGCGATC...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTATTTTTCCTAGGTCTCCAAAATaGGCAGCCTCCATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QACWPQSHPFCPIYLFIFPRSPK*AASMWL Trigger: AAGCCACATGGAGGCTGCTCATTTTGGAGACCTAGG...AAAAATAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | TGTGAATCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACAGACAGGCTCAGCCAGTaGACTCTGTTTCACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CESSYAHAITCIGGQMKTDRLSQ*TLFHCV Trigger: AACACAGTGAAACAGAGTTCACTGGCTGAGCCTGTC...TGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGATTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAAAAATAAAAGAGGGCTaGCTCACAGAAGAGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHAKIKEG*LTEEDI Trigger: GATATCCTCTTCTGTGAGTCAGCCCTCTTTTATTTT...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | CATGTCTATGTCTACACCCAAACACAAGGCTATGTCCAATTGGGGATTATGTTCAAAGACTACAGCCTGTaGCAGAACGAAACAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVYVYTQTQGYVQLGIMFKDYSL*QNETVG Trigger: CCCAACTGTTTCGTTCTGGCACAGGCTGTAGTCTTT...GAACATAATCCCCAATTGGACATAGCCTTGTGTTTGGGTGTAGACATAGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | GTGCTGAGATTAAAGGTAGGCCACAATGCCTGGCTTCCTTTTAACTACTATATCGTGCTCTTGCTCCATTaGACTAAAGACTACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLRLKVGHNAWLPFNYYIVLLLH*TKDYSL Trigger: CAGGCTGTAGTCTTTAGTGCAATGGAGCAAGAGCAC...GATATAGTAGTTAAAAGGAAGCCAGGCATTGTGGCCTACCTTTAATCTCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR GCA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCGTGCTCTTGCTCCATTaGACTAAAGACTACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MQRQRTLRITFDSMSLCCVLLLH*TKDYSL Trigger: CAGGCTGTAGTCTTTAGTGCAATGGAGCAAGAGCAC...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTGGGCTGCTAATGCATCCAGAAACTCACTAAAGTaGTCTTGCTCCATTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VSLCITEMLSVVWAANASRNSLK*SCSIAL Trigger: TAGTGCAATGGAGCAAGAGCACTTTAGTGAGTTTCT...GGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | AGATCCATTTGTCTTGGTCTCTTGAGTGCTGAGATTAAAGGTAGGCCACAATGCTTCTGGGTCCAGACTTaGAGCATCCACAATTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSICLGLLSAEIKGRPQCFWVQT*SIHNYC Trigger: GCAATAATTGTGGATGCTGCAAGTCTGGACCCAGAA...GCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCAAGACAAATGGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGGAATTCACTATGGAGACCAAGCTGGTCTTGAATTTACAAAGATCCATCTCATGTCTTTTAGATaGAGAGACAGGCTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQGIHYGDQAGLEFTKIHLMSFR*RDRLSQ Trigger: CTGGCTGAGCCTGTCTCTCCATCTAAAAGACATGAG...ATGGATCTTTGTAAATTCAAGACCAGCTTGGTCTCCATAGTGAATTCCCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GACCAAGCTGGTCTTGAATTTACAAAGATCCATTTGTCTTGGTCTCTTGAGTGCCCAGAACGAAACAGTTaGGATCCACCTGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLEFTKIHLSWSLECPERNS*DPPVHL Trigger: AAGATGGACAGGTGGATCCCAACTGTTTCGTTCTGG...GCACTCAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGACCAGCTTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTCCAGAACGAAACAGTTaGGATCCACCTGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CKGRGHSESRLTLCLYVAPERNS*DPPVHL Trigger: AAGATGGACAGGTGGATCCCAACTGTTTCGTTCTGG...AGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCAAGGGGGTGTGTGGCTTaGAGGGAAAAGTACTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQRTLRITFDSMSLCCFSRGCVA*REKYLS Trigger: TGACAAGTACTTTTCCCTCCAAGCCACACACCCCCT...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCTTCCTTTTAACTACTATATCACATGGCATGTGAAAATGCTGGGCATTAAAAGACCTTCTCCATaGTTGTCCAGGCCTGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: AWLPFNYYITWHVKMLGIKRPSP*LSRPDV Trigger: TACGTCAGGCCTGGACAACCATGGAGAAGGTCTTTT...AATGCCCAGCATTTTCACATGCCATGTGATATAGTAGTTAAAAGGAAGCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | CATGTCTATGTCTACACCCAAACACAAGGCTATGTCCAATTGGGGATTATGTTCAAAAGACCTTCTCCATaGTTGTCCAGGCCTGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: HVYVYTQTQGYVQLGIMFKRPSP*LSRPDV Trigger: TACGTCAGGCCTGGACAACCATGGAGAAGGTCTTTT...GAACATAATCCCCAATTGGACATAGCCTTGTGTTTGGGTGTAGACATAGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| 3UTR CAA 72 bp | GCTGGCAGGGAATTCACTATGGAGACCAAGCTGGTCTaGAATTTACAAAGATCCATTTGTCTTGGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGREFTMETKLV*NLQRSICLGLL Trigger: CAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGACCAGCTTGGTCTCCATAGTGAATTCCCTGCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | GACCAAGCTGGTCTTGAATTTACAAAGATCCATTTGTCTTGGTCTCTTGAGTGCTTTTTGGCAGCAAGCTaGGACTGGAAATTATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLEFTKIHLSWSLECFLAAS*DWKLSA Trigger: AGCGGATAATTTCCAGTCTCAGCTTGCTGCCAAAAA...GCACTCAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGACCAGCTTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACTTCATCTCCTCGAACTaGATGGATGAGATCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHFISSN*MDEIIQ Trigger: TTGAATGATCTCATCCATTCAGTTCGAGGAGATGAA...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTACCTGCATATGTCCGTTaGTATAAAGATTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFRPAGPKAILFVLFIYLPAYVR*YKDSGS Trigger: GGACCCAGAATCTTTATATCAACGGACATATGCAGG...TAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCATGGCAGAAATGGCATTaGTCGCAACATGACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQRTLRITFDSMSLCCFSWQKWH*SQHDLV Trigger: GACCAAGTCATGTTGCGATCAATGCCATTTCTGCCA...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTACAAAATTTCACCAGGTaGTCCATTCTCCGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFRPAGPKAILFVLFIYLQNFTR*SILRSS Trigger: GGAACTTCGGAGAATGGAGCACCTGGTGAAATTTTG...TAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTCAAAATTTCACCAGGTaGTCCATTCTCCGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKGRGHSESRLTLCLYVAQNFTR*SILRSS Trigger: GGAACTTCGGAGAATGGAGCACCTGGTGAAATTTTG...AGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTAGAAACTCACTAAAGTaGTCTTGCTCCATTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GPSGLLAPKPSFLSYLFIRNSLK*SCSIAL Trigger: TAGTGCAATGGAGCAAGAGCACTTTAGTGAGTTTCT...AATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR GCA 90 bp | GGAGTAACATCCAAGGCTGACCTGTCCTCTGCACTTTTGAGCATGTACACACACATTTGTAATAAAGATTaGTGGACAGAAAACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTSKADLSSALLSMYTHICNKD*WTENQA Trigger: TGCCTGGTTTTCTGTCCAGCAATCTTTATTACAAAT...GTGTGTGTACATGCTCAAAAGTGCAGAGGACAGGTCAGCCTTGGATGTTACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATTTCTGGGTCCAGACTTaGAGCATCCACAATTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EACKGRGHSESRLTLCLYFWVQT*SIHNYC Trigger: GCAATAATTGTGGATGCTGCAAGTCTGGACCCAGAA...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGTCTAAGGTCTTCTCTTaGTCTTTACCTTTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLRIRHCQHSQVNPKAMSKVFS*SLPFTF Trigger: GAAAGTGAAAGGTAAAGAGCAAGAGAAGACCTTAGA...CATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCACTCATGTCTTTTAGATaGAGAGACAGGCTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRTLRITFDSMSLCCFSLMSFR*RDRLSQ Trigger: CTGGCTGAGCCTGTCTCTCCATCTAAAAGACATGAG...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAAGTTACAGAAGATGCTaGAGTCTCATGTCTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASPYTSLSTQSGQSKSHASYRRC*SLMSFR Trigger: TCTAAAAGACATGAGACTCCAGCATCTTCTGTAACT...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | ATTGCTCTTCTGAAGGTTCTGAGTTCAAATCCCAGCAACCACATGATGGCTCACTTCTGTAATTGGTATTaGCTTAGCAGCATCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IALLKVLSSNPSNHMMAHFCNWY*LSSIWR Trigger: TCTCCAGATGCTGCTAAGCCAATACCAATTACAGAA...GTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTCAGAAGAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | CATGTCTATGTCTACACCCAAACACAAGGCTATGTCCAATTGGGGATTATGTTCGAAACAATTAGGAAGTaGTCCACCTTCCCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HVYVYTQTQGYVQLGIMFETIRK*STFPAD Trigger: ATCTGCAGGGAAGGTGGACCACTTCCTAATTGTTTC...GAACATAATCCCCAATTGGACATAGCCTTGTGTTTGGGTGTAGACATAGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | TCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGGTTGTTCAAGGGTCTTTaGAAGACTGGATTTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSYAHAITCIGGQMKTSRLFKGL*KTGFGL Trigger: GAGACCAAATCCAGTCTTTCAAAGACCCTTGAACAA...CCTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR GCA 90 bp | GGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTTCTCCACAAATCTTTaGGATGATGTCGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPSGLLAPKPSFLSYLFIFSTNL*DDVVSH Trigger: ATGAGAAACGACATCATCGCAAAGATTTGTGGAGAA...AATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GACCAAGCTGGTCTTGAATTTACAAAGATCCATTTGTCTTGGTCTCTTGAGTGCCATGGCTTCTGTAATTaGTATTGGCTTAGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLEFTKIHLSWSLECHGFCN*YWLSSI Trigger: GATGCTGCTAAGCCAATACCAATTACAGAAGCCATG...GCACTCAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGACCAGCTTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTGGGCTGCTAATGCATCCTCTCCTCGAACTGAATaGATGAGATCATTCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLCITEMLSVVWAANASSPRTE*MRSFKY Trigger: ATATTTGAATGATCTCATCCATTCAGTTCGAGGAGA...GGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR CAA 72 bp | GTCTTGAATTTACAAAGATCCATTTGTCTTGGTCTCTaGAGTGCTGAGATTAAAGGTAGGCCACAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLNLQRSICLGL*SAEIKGRPQCL Trigger: CAGGCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | GACCAAGCTGGTCTTGAATTTACAAAGATCCATTTGTCTTGGTCTCTTGAGTGCAAAATAAAAGAGGGCTaGCTCACAGAAGAGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLEFTKIHLSWSLECKIKEG*LTEEDI Trigger: GATATCCTCTTCTGTGAGTCAGCCCTCTTTTATTTT...GCACTCAAGAGACCAAGACAAATGGATCTTTGTAAATTCAAGACCAGCTTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATAAAATAAAAGAGGGCTaGCTCACAGAAGAGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: EACKGRGHSESRLTLCLYKIKEG*LTEEDI Trigger: GATATCCTCTTCTGTGAGTCAGCCCTCTTTTATTTT...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | TATGAAATGGAGAGAAATGCTTTGTTAAAGGAACAGAAGAGCCACAACAGCACATTTTTGGCAGCAAGCTaGGACTGGAAATTATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YEMERNALLKEQKSHNSTFLAAS*DWKLSA Trigger: AGCGGATAATTTCCAGTCTCAGCTTGCTGCCAAAAA...TGTGCTGTTGTGGCTCTTCTGTTCCTTTAACAAAGCATTTCTCTCCATTTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | GTGCTGAGATTAAAGGTAGGCCACAATGCCTGGCTTCCTTTTAACTACTATATCTTCATCTCCTCGAACTaGATGGATGAGATCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLRLKVGHNAWLPFNYYIFISSN*MDEIIQ Trigger: TTGAATGATCTCATCCATTCAGTTCGAGGAGATGAA...GATATAGTAGTTAAAAGGAAGCCAGGCATTGTGGCCTACCTTTAATCTCAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATTTCATCTCCTCGAACTaGATGGATGAGATCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EACKGRGHSESRLTLCLYFISSN*MDEIIQ Trigger: TTGAATGATCTCATCCATTCAGTTCGAGGAGATGAA...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGTTCTCCACAAATCTTTaGGATGATGTCGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNNSESSKEAPSMKQMSRFSTNL*DDVVSH Trigger: ATGAGAAACGACATCATCGCAAAGATTTGTGGAGAA...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | AGATCCATTTGTCTTGGTCTCTTGAGTGCTGAGATTAAAGGTAGGCCACAATGCAGTTACAGAAGATGCTaGAGTCTCATGTCTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSICLGLLSAEIKGRPQCSYRRC*SLMSFR Trigger: TCTAAAAGACATGAGACTCCAGCATCTTCTGTAACT...GCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCAAGACAAATGGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | ATCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGCGAAGTTCCATAAACTaGAGGAAATATGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IQLCTCHNMHWRSDENIKRSSIN*RKYGRT Trigger: TGTCCTTCCATATTTCCTTCAGTTTATGGAACTTCG...CTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR TCA 90 bp | TCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGGTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SSYAHAITCIGGQMKTSRYLQKW*LRRNSL Trigger: TAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATA...CCTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | TTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGGAGATGAAACTGAAGGAAATATaGAAGGACAACAGTGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LCTCHNMHWRSDENIKEMKLKEI*KDNSVT Trigger: CGTGACACTGTTGTCCTTCCATATTTCCTTCAGTTT...CATCTCCTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATAGTTACAGAAGATGCTaGAGTCTCATGTCTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EACKGRGHSESRLTLCLYSYRRC*SLMSFR Trigger: TCTAAAAGACATGAGACTCCAGCATCTTCTGTAACT...ATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGTGGCTTAGCAGCATCTaGAGATATATATTTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNNSESSKEAPSMKQMSRWLSSI*RYIFGK Trigger: TTTACCAAATATATATCTCCAGATGCTGCTAAGCCA...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCATTCTGTAATTGGTATTaGCTTAGCAGCATCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQRTLRITFDSMSLCCFSFCNWY*LSSIWR Trigger: TCTCCAGATGCTGCTAAGCCAATACCAATTACAGAA...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGTGTAATAAAGATTGCTaGACAGAAAACCAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNNSESSKEAPSMKQMSRCNKDC*TENQAK Trigger: TTTTGCCTGGTTTTCTGTCCAGCAATCTTTATTACA...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| 3UTR CAA 72 bp | GAAGCATGCAAAGGCAGAGGACACTCAGAATCACGTTaGACTCTATGTCTTTATGTTGCTTTTCACTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EACKGRGHSESR*TLCLYVAFHLK Trigger: CTTTAAGTGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR TCA 90 bp | TATGAAATGGAGAGAAATGCTTTGTTAAAGGAACAGAAGAGCCACAACAGCACACGAAGTTCCATAAACTaGAGGAAATATGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YEMERNALLKEQKSHNSTRSSIN*RKYGRT Trigger: TGTCCTTCCATATTTCCTTCAGTTTATGGAACTTCG...TGTGCTGTTGTGGCTCTTCTGTTCCTTTAACAAAGCATTTCTCTCCATTTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTATTTTTCTCAGTTACAGAAGATaGTGGAGTCTCATGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QACWPQSHPFCPIYLFIFLSYRR*WSLMSF Trigger: AAAAGACATGAGACTCCAGCATCTTCTGTAACTGAG...AAAAATAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCTTCCTTTTAACTACTATATCACATGGCATGTGAAAATGCTGGGCATTTGGCTTAGCAGCATCTaGAGATATATATTTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AWLPFNYYITWHVKMLGIWLSSI*RYIFGK Trigger: TTTACCAAATATATATCTCCAGATGCTGCTAAGCCA...AATGCCCAGCATTTTCACATGCCATGTGATATAGTAGTTAAAAGGAAGCCAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | CATGTCTATGTCTACACCCAAACACAAGGCTATGTCCAATTGGGGATTATGTTCTGGCTTAGCAGCATCTaGAGATATATATTTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HVYVYTQTQGYVQLGIMFWLSSI*RYIFGK Trigger: TTTACCAAATATATATCTCCAGATGCTGCTAAGCCA...GAACATAATCCCCAATTGGACATAGCCTTGTGTTTGGGTGTAGACATAGACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTATTTTTTTCTGTAATTGGTATTaGCTTAGCAGCATCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QACWPQSHPFCPIYLFIFFCNWY*LSSIWR Trigger: TCTCCAGATGCTGCTAAGCCAATACCAATTACAGAA...AAAAATAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTG 39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTGTAATAAAGATTGCTaGACAGAAAACCAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MQRQRTLRITFDSMSLCCCNKDC*TENQAK Trigger: TTTTGCCTGGTTTTCTGTCCAGCAATCTTTATTACA...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGATTTGTAATAAAGATTaGTGGACAGAAAACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQLCTCHNMHWRSDENIKICNKD*WTENQA Trigger: TGCCTGGTTTTCTGTCCAGCAATCTTTATTACAAAT...CTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTTATTTTTTTGAAAGACTGGATTTaGTCTCTTGAGTCTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QACWPQSHPFCPIYLFIFLKDWI*SLESDS Trigger: ACTATCAGACTCAAGAGACCAAATCCAGTCTTTCAA...AAAAATAAATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTG 38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGTAGGCCACAATGCCTGGCTTCCTTTTAACTACTATATCACATGGCATTGTAATAAAGATTGCTaGACAGAAAACCAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKVGHNAWLPFNYYITWHCNKDC*TENQAK Trigger: TTTTGCCTGGTTTTCTGTCCAGCAATCTTTATTACA...ATGCCATGTGATATAGTAGTTAAAAGGAAGCCAGGCATTGTGGCCTACCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CCA 90 bp | TGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGGAGATGATTCTCTCTTCTCCTCGAACTGAATaGATGAGATCATTCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: CHNMHWRSDENIKEMILSSPRTE*MRSFKY Trigger: ATATTTGAATGATCTCATCCATTCAGTTCGAGGAGA...AGAGAGAATCATCTCCTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| 3UTR CAA 72 bp | ATGGTACATAGTACCAAAAACTTATACACAGCCTTTTaGCTTCTTCTGTTGAACAGTGTGCCTCTGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: MVHSTKNLYTAF*LLLLNSVPLYN Trigger: ATTGTACAGAGGCACACTGTTCAACAGAAGAAGCAAAAAGGCTGTGTATAAGTTTTTGGTACTATGTACCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CAA 90 bp | CCACTCACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCAAGACCTTCTCCATGGTaGTCCAGGCCTGACGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PLTVKNWGDTHKGVLLSPRPSPW*SRPDVM Trigger: CATTACGTCAGGCCTGGACAACCATGGAGAAGGTCT...TGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGTGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CAA 90 bp | TGCGAGCATGTGGTCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATGGTCGAAAAGGAGTCCATGTaGGCAGAAATGGCATTGATC | + |
|
Preference number: 5 (lower is better) Translates to: CEHVVPVYPSERGHWKMVEKESM*AEMALI Trigger: GATCAATGCCATTTCTGCCAACATGGACTCCTTTTC...GACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCTCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCGAAAAGGAGTCCATGTaGGCAGAAATGGCATTGATC | + |
|
Preference number: 5 (lower is better) Translates to: EQVELTGASRVNWSGQRSEKESM*AEMALI Trigger: GATCAATGCCATTTCTGCCAACATGGACTCCTTTTC...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | TGCGAGCATGTGGTCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATGGTCCTTGTTCAAGGGTCTTaGAAAGACTGGATTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CEHVVPVYPSERGHWKMVLVQGS*KDWIWS Trigger: AGACCAAATCCAGTCTTTCAAAGACCCTTGAACAAG...GACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGTGGAGTTGACTGGAGCGAGTAGGGTCAACTGGAGTGGGCAGAGGTCCCTTGTTCAAGGGTCTTaGAAAGACTGGATTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EQVELTGASRVNWSGQRSLVQGS*KDWIWS Trigger: AGACCAAATCCAGTCTTTCAAAGACCCTTGAACAAG...GGACCTCTGCCCACTCCAGTTGACCCTACTCGCTCCAGTCAACTCCACTTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGAAGAATTGGGGAGACACCCACAAGGGAGTGCTTCTGTCCCCACCTTATGCCAGAACGAAACAGTaGGGATCCACCTGTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TVKNWGDTHKGVLLSPPYARTKQ*GSTCPS Trigger: AGATGGACAGGTGGATCCCAACTGTTTCGTTCTGGC...ATAAGGTGGGGACAGAAGCACTCCCTTGTGGGTGTCTCCCCAATTCTTCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CAA 90 bp | TGCGAGCATGTGGTCCCTGTCTACCCCAGTGAGCGTGGCCACTGGAAAATGGTCGAAGCTTTAGTGGACTaGACATCTAAGGTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CEHVVPVYPSERGHWKMVEALVD*TSKVFS Trigger: AGAGAAGACCTTAGATGTCAAGTCCACTAAAGCTTC...GACCATTTTCCAGTGGCCACGCTCACTGGGGTAGACAGGGACCACATGCTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTAAGCTGTTACACACAAGGAAGCACTGGCACCGTGAGGCTGGGGGAGTTGCTGTCCTGCTACTaGAAAAGGAGTCCATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSLSCYTQGSTGTVRLGELLSCY*KRSPCW Trigger: CCAACATGGACTCCTTTTCAAGTAGCAGGACAGCAA...CTCCCCCAGCCTCACGGTGCCAGTGCTTCCTTGTGTGTAACAGCTTAGAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS GCA 90 bp | GCTAGAATCCCCCAACCTCCTGTCAAGAGCCTCAGTTACAGAAGATaGTGGAGTCTCATGTCTTTTAGATGGAGAGACAGGCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARIPQPPVKSLSYRR*WSLMSFRWRDRLSQ Trigger: CTGGCTGAGCCTGTCTCTCCATCTAAAAGACATGAGACTCCAGCATCTTCTGTAACTGAGGCTCTTGACAGGAGGTTGGGGGATTCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
||
| CDS GCA 90 bp | GTTTTTCTGACAGTTCTCTCAGTGGAGAAGAGCAACTGTTTCTACTaGCTACTGCAAGTCTGGAGGAGGAGTCCTGGGAGTCGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFLTVLSVEKSNCFY*LLQVWRRSPGSRWE Trigger: TTCCCACCGACTCCCAGGACTCCTCCTCCAGACTTGCAGTAGGCAGTAGAAACAGTTGCTCTTCTCCACTGAGAGAACTGTCAGAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
||
| CDS TCA 90 bp | CTGTCCTGCTACTTGAAAAGGAGTCCATGTTGGCAGAAATGGCATTaGTCGCAACATGACTTGGTCCTGCAGCCTCCAGCAAGGCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSCYLKRSPCWQKWH*SQHDLVLQPPARHD Trigger: ATCATGCCTTGCTGGAGGCTGCAGGACCAAGTCATGTTGCGATCAATGCCATTTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102650.10 ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCAAAGGGGGTGTGTGGCTaGGAGGGAAAAGTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASPYTSLSTQSGQSKSHAKGVCG*EGKVLV Trigger: GACAAGTACTTTTCCCTCCAAGCCACACACCCCCTT...TGCATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGAGACCTTCTCCATGGTaGTCCAGGCCTGACGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: QLLRIRHCQHSQVNPKAMRPSPW*SRPDVM Trigger: CATTACGTCAGGCCTGGACAACCATGGAGAAGGTCT...CATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | GGATCTCACTGTGTAACCTTGGCTGGCAGGGAATTCACTATGGAGACCAAGCTGCTCACTAAAGTGCTCTaGCTCCATTGCACTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSHCVTLAGREFTMETKLLTKVL*LHCTKD Trigger: GTCTTTAGTGCAATGGAGCAAGAGCACTTTAGTGAG...CAGCTTGGTCTCCATAGTGAATTCCCTGCCAGCCAAGGTTACACAGTGAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS TCA 90 bp | GACAGAAAACCAGGCAAAAAGACCTTCTCCATGGTTGTCCAGGCCTaGCGTAATGGAGTTGTGAAACAATTAGGAAGTGGTCCACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRKPGKKTFSMVVQA*RNGVVKQLGSGPPS Trigger: GGAAGGTGGACCACTTCCTAATTGTTTCACAACTCCATTACGTCAGGCCTGGACAACCATGGAGAAGGTCTTTTTGCCTGGTTTTCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
||
| CDS TCA 90 bp | CTCCATGTGGCTTGGCTGTTTCTTAAGCGTTGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGCAGAAATGGCATTGATCGCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: LHVAWLFLKRCCPAT*KGVHVGRNGIDRNM Trigger: CATGTTGCGATCAATGCCATTTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCAACGCTTAAGAAACAGCCAAGCCACATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102650.10 ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | AGATCCATTTGTCTTGGTCTCTTGAGTGCTGAGATTAAAGGTAGGCCACAATGCAGACCTTCTCCATGGTaGTCCAGGCCTGACGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: RSICLGLLSAEIKGRPQCRPSPW*SRPDVM Trigger: CATTACGTCAGGCCTGGACAACCATGGAGAAGGTCT...GCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCAAGACAAATGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS TCA 90 bp | TTCTGGGCCTCCTGTCCATCATACTGGCCCTTTTTGGCAGCAAGCTaGGACTGGAAATTATCCGCTGCTAACCAGAATTGTAAGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: FWASCPSYWPFLAAS*DWKLSAANQNCKIF Trigger: GAATATCTTACAATTCTGGTTAGCAGCGGATAATTTCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAGTATGATGGACAGGAGGCCCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTCCGTATACGTCACTGTCAACACAGTCAGGTCAATCCAAAAGCCATGCTCACTAAAGTGCTCTaGCTCCATTGCACTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLLRIRHCQHSQVNPKAMLTKVL*LHCTKD Trigger: GTCTTTAGTGCAATGGAGCAAGAGCACTTTAGTGAG...CATGGCTTTTGGATTGACCTGACTGTGTTGACAGTGACGTATACGGAGAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
||
| CDS-3UTR CAA 90 bp | GAACTGACTGAACTCAGGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTTGGAGGGAAAAGTACTaGTCATATAAAATCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELTELRSFRPAGPKAILFWREKY*SYKIMA Trigger: TGCCATGATTTTATATGACAAGTACTTTTCCCTCCA...AAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACCTGAGTTCAGTCAGTTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CAA 90 bp | GTGCTGAGATTAAAGGTAGGCCACAATGCCTGGCTTCCTTTTAACTACTATATCAAGGGGGTGTGTGGCTaGGAGGGAAAAGTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLRLKVGHNAWLPFNYYIKGVCG*EGKVLV Trigger: GACAAGTACTTTTCCCTCCAAGCCACACACCCCCTT...GATATAGTAGTTAAAAGGAAGCCAGGCATTGTGGCCTACCTTTAATCTCAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS GCA 90 bp | TTTGATTTCTTCACATCAGGTTCAGGCTCAGACTCTCGGATGAACTaGCCCAAATCACTAACTCTCCCAAAGGACATCTTCCCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: FDFFTSGSGSDSRMN*PKSLTLPKDIFPAY Trigger: ATATGCAGGGAAGATGTCCTTTGGGAGAGTTAGTGATTTGGGGCAGTTCATCCGAGAGTCTGAGCCTGAACCTGATGTGAAGAAATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
||
| CDS-3UTR CAA 90 bp | ATCCAGTTATGCACATGCCATAACATGCATTGGAGGTCAGATGAAAACATCAAGGCCAGAACGAAACAGTaGGGATCCACCTGTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: IQLCTCHNMHWRSDENIKARTKQ*GSTCPS Trigger: AGATGGACAGGTGGATCCCAACTGTTTCGTTCTGGC...CTTGATGTTTTCATCTGACCTCCAATGCATGTTATGGCATGTGCATAACTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
||
| CDS-3UTR CAA 90 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTGGGCTGCTAATGCATCCGAAGCTTTAGTGGACTaGACATCTAAGGTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSLCITEMLSVVWAANASEALVD*TSKVFS Trigger: AGAGAAGACCTTAGATGTCAAGTCCACTAAAGCTTC...GGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CAA 90 bp | GGAAACAATTCTGAAAGTAGTAAGGAAGCGCCCTCAATGAAACAGATGAGCAGGTTGCTGTCCTGCTACTaGAAAAGGAGTCCATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GNNSESSKEAPSMKQMSRLLSCY*KRSPCW Trigger: CCAACATGGACTCCTTTTCAAGTAGCAGGACAGCAA...CCTGCTCATCTGTTTCATTGAGGGCGCTTCCTTACTACTTTCAGAATTGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS TCA 90 bp | ATATGGAAGGACAACAGTGTCACGCAAGACTTGTTCAAGGGTCTTTaGAAGACTGGATTTGGTCTCTTGAGTCTGATAGTCCAGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: IWKDNSVTQDLFKGL*KTGFGLLSLIVQTG Trigger: TCCTGTCTGGACTATCAGACTCAAGAGACCAAATCCAGTCTTTCAAAGACCCTTGAACAAGTCTTGCGTGACACTGTTGTCCTTCCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 90 bp | ACAGTCCCACTGGTCAGCACTTCAATCTGGTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTAAAGTGCTCTTGCTCCATTGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: TVPLVSTSIWYLQKW*LRRNSLKCSCSIAL Trigger: TAGTGCAATGGAGCAAGAGCACTTTAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATACCAGATTGAAGTGCTGACCAGTGGGACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTTCAGGCCTGCTGGCCCCAAAGCCATCCTTTTTGTCCTATTTATTTATTCTTGTTCAAGGGTCTTaGAAAGACTGGATTTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GPSGLLAPKPSFLSYLFILVQGS*KDWIWS Trigger: AGACCAAATCCAGTCTTTCAAAGACCCTTGAACAAG...AATAAATAAATAGGACAAAAAGGATGGCTTTGGGGCCAGCAGGCCTGAAGGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| CDS-3UTR CAA 90 bp | TATGAAATGGAGAGAAATGCTTTGTTAAAGGAACAGAAGAGCCACAACAGCACAAAGGGGGTGTGTGGCTaGGAGGGAAAAGTACTTGTC | + |
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Preference number: 5 (lower is better) Translates to: YEMERNALLKEQKSHNSTKGVCG*EGKVLV Trigger: GACAAGTACTTTTCCCTCCAAGCCACACACCCCCTT...TGTGCTGTTGTGGCTCTTCTGTTCCTTTAACAAAGCATTTCTCTCCATTTCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CAA 90 bp | TGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTCTCACTAAAGTGCTCTaGCTCCATTGCACTAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CKGRGHSESRLTLCLYVALTKVL*LHCTKD Trigger: GTCTTTAGTGCAATGGAGCAAGAGCACTTTAGTGAG...AGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CAA 90 bp | GTTTCGCTGTGTATAACAGAGATGCTGAGTGTTGTCTGGGCTGCTAATGCATCCTGGAGGGAAAAGTACTaGTCATATAAAATCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLCITEMLSVVWAANASWREKY*SYKIMA Trigger: TGCCATGATTTTATATGACAAGTACTTTTCCCTCCA...GGATGCATTAGCAGCCCAGACAACACTCAGCATCTCTGTTATACACAGCGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108710.2 |
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| CDS-3UTR CAA 90 bp | GTGCTGAGATTAAAGGTAGGCCACAATGCCTGGCTTCCTTTTAACTACTATATCATTCTGGGTCCAGACTaGCAGCATCCACAATTATTG | + |
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Preference number: 5 (lower is better) Translates to: VLRLKVGHNAWLPFNYYIILGPD*QHPQLL Trigger: CAATAATTGTGGATGCTGCAAGTCTGGACCCAGAAT...GATATAGTAGTTAAAAGGAAGCCAGGCATTGTGGCCTACCTTTAATCTCAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058173.12 |
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| CDS TCA 90 bp | AACCAAAATTTCACCAGGTGCTCCATTCTCCGAAGTTCCATAAACTaGAGGAAATATGGAAGGACAACAGTGTCACGCAAGACTTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NQNFTRCSILRSSIN*RKYGRTTVSRKTCS Trigger: TGAACAAGTCTTGCGTGACACTGTTGTCCTTCCATATTTCCTTCAGTTTATGGAACTTCGGAGAATGGAGCACCTGGTGAAATTTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCAATTCTGGGTCCAGACTaGCAGCATCCACAATTATTG | + |
|
Preference number: 5 (lower is better) Translates to: RQRTLRITFDSMSLCCFSILGPD*QHPQLL Trigger: CAATAATTGTGGATGCTGCAAGTCTGGACCCAGAAT...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS TCA 90 bp | AAATCACTAACTCTCCCAAAGGACATCTTCCCTGCATATGTCCGTTaGTATAAAGATTCTGGGTCCAGACTTGCAGCATCCACAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: KSLTLPKDIFPAYVR*YKDSGSRLAASTII Trigger: AATAATTGTGGATGCTGCAAGTCTGGACCCAGAATCTTTATATCAACGGACATATGCAGGGAAGATGTCCTTTGGGAGAGTTAGTGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CAA 90 bp | ATGCAAAGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCCACTCACTATCATTTTaGCAATCTTCCAAGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MQRQRTLRITFDSMSLCCHSLSF*QSSKLA Trigger: AGCTAGCTTGGAAGATTGCAAAAATGATAGTGAGTG...GCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS-3UTR CAA 90 bp | AGGCAGAGGACACTCAGAATCACGTTTGACTCTATGTCTTTATGTTGCTTTTCATGGAGGGAAAAGTACTaGTCATATAAAATCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQRTLRITFDSMSLCCFSWREKY*SYKIMA Trigger: TGCCATGATTTTATATGACAAGTACTTTTCCCTCCA...TGAAAAGCAACATAAAGACATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS CCA 90 bp | TCCACAAATCTTTGCGATGATGTCGTTTCTCATGGCTTCTGTAATTaGTATTGGCTTAGCAGCATCTGGAGATATATATTTGGTAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: STNLCDDVVSHGFCN*YWLSSIWRYIFGKS Trigger: ACTTTTACCAAATATATATCTCCAGATGCTGCTAAGCCAATACCAATTACAGAAGCCATGAGAAACGACATCATCGCAAAGATTTGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 90 bp | GGGAAACATTCCCTCCAAGAAATTCATCTCCTCGAACTGAATGGATaGGATCATTCAAATATTTGTAATAAAGATTGCTGGACAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKHSLQEIHLLELNG*DHSNICNKDCWTEN Trigger: GTTTTCTGTCCAGCAATCTTTATTACAAATATTTGAATGATCTCATCCATTCAGTTCGAGGAGATGAATTTCTTGGAGGGAATGTTTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CCA 72 bp | CTACTGCAAGTCTGGAGGAGGAGTCCTGGGAGTCGGTaGGAATCTGATGACTTCCTGTTCTGGCCACCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLQVWRRSPGSR*ESDDFLFWPPH Trigger: GTGAGGTGGCCAGAACAGGAAGTCATCAGATTCCCACCGACTCCCAGGACTCCTCCTCCAGACTTGCAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS GCA 72 bp | TCTCAGTGGAGAAGAGCAACTGTTTCTACTGCCTACTaGAAGTCTGGAGGAGGAGTCCTGGGAGTCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQWRRATVSTAY*KSGGGVLGVGG Trigger: CCCACCGACTCCCAGGACTCCTCCTCCAGACTTGCAGTAGGCAGTAGAAACAGTTGCTCTTCTCCACTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CCA 72 bp | GAGAAGAGCAACTGTTTCTACTGCCTACTGCAAGTCTaGAGGAGGAGTCCTGGGAGTCGGTGGGAATCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: EKSNCFYCLLQV*RRSPGSRWESD Trigger: ATCAGATTCCCACCGACTCCCAGGACTCCTCCTCCAGACTTGCAGTAGGCAGTAGAAACAGTTGCTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS GCA 72 bp | ACAGTTCTCTCAGTGGAGAAGAGCAACTGTTTCTACTaGCTACTGCAAGTCTGGAGGAGGAGTCCTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TVLSVEKSNCFY*LLQVWRRSPGS Trigger: ACTCCCAGGACTCCTCCTCCAGACTTGCAGTAGGCAGTAGAAACAGTTGCTCTTCTCCACTGAGAGAACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS GCA 72 bp | CCCCAACCTCCTGTCAAGAGCCTCAGTTACAGAAGATaGTGGAGTCTCATGTCTTTTAGATGGAGAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQPPVKSLSYRR*WSLMSFRWRDR Trigger: CCTGTCTCTCCATCTAAAAGACATGAGACTCCAGCATCTTCTGTAACTGAGGCTCTTGACAGGAGGTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 72 bp | TACTTGAAAAGGAGTCCATGTTGGCAGAAATGGCATTaGTCGCAACATGACTTGGTCCTGCAGCCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YLKRSPCWQKWH*SQHDLVLQPPA Trigger: TGCTGGAGGCTGCAGGACCAAGTCATGTTGCGATCAATGCCATTTCTGCCAACATGGACTCCTTTTCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS GCA 72 bp | TTCACATCAGGTTCAGGCTCAGACTCTCGGATGAACTaGCCCAAATCACTAACTCTCCCAAAGGACATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTSGSGSDSRMN*PKSLTLPKDIF Trigger: GAAGATGTCCTTTGGGAGAGTTAGTGATTTGGGGCAGTTCATCCGAGAGTCTGAGCCTGAACCTGATGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS CCA 72 bp | CAACCTCCTGTCAAGAGCCTCAGTTACAGAAGATGCTaGAGTCTCATGTCTTTTAGATGGAGAGACAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QPPVKSLSYRRC*SLMSFRWRDRL Trigger: GAGCCTGTCTCTCCATCTAAAAGACATGAGACTCCAGCATCTTCTGTAACTGAGGCTCTTGACAGGAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CAA 90 bp | TGCTCCATTGCACTAAAGACTACAGCCTGTGCCAGAACGAAACAGTaGGGATCCACCTGTCCATCTTCTCCACAAATCTTTGCGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: CSIALKTTACARTKQ*GSTCPSSPQIFAMM Trigger: CATCATCGCAAAGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTCTGGCACAGGCTGTAGTCTTTAGTGCAATGGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 72 bp | TCCTGTCCATCATACTGGCCCTTTTTGGCAGCAAGCTaGGACTGGAAATTATCCGCTGCTAACCAGAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCPSYWPFLAAS*DWKLSAANQNC Trigger: ACAATTCTGGTTAGCAGCGGATAATTTCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAGTATGATGGACAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 72 bp | ACTCTCCCAAAGGACATCTTCCCTGCATATGTCCGTTaGTATAAAGATTCTGGGTCCAGACTTGCAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TLPKDIFPAYVR*YKDSGSRLAAS Trigger: GGATGCTGCAAGTCTGGACCCAGAATCTTTATATCAACGGACATATGCAGGGAAGATGTCCTTTGGGAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS CCA 72 bp | CATGTTGGCAGAAATGGCATTGATCGCAACATGACTTaGTCCTGCAGCCTCCAGCAAGGCATGATTTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: HVGRNGIDRNMT*SCSLQQGMIFS Trigger: ACTAAAAATCATGCCTTGCTGGAGGCTGCAGGACCAAGTCATGTTGCGATCAATGCCATTTCTGCCAACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CAA 72 bp | GCACTAAAGACTACAGCCTGTGCCAGAACGAAACAGTaGGGATCCACCTGTCCATCTTCTCCACAAATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALKTTACARTKQ*GSTCPSSPQIF Trigger: AAAGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTCTGGCACAGGCTGTAGTCTTTAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 72 bp | TTCACCAGGTGCTCCATTCTCCGAAGTTCCATAAACTaGAGGAAATATGGAAGGACAACAGTGTCACGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FTRCSILRSSIN*RKYGRTTVSRK Trigger: CTTGCGTGACACTGTTGTCCTTCCATATTTCCTTCAGTTTATGGAACTTCGGAGAATGGAGCACCTGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS GCA 72 bp | CAAGCTAGCTCTTCTTGGGCCTCGTCAGTATTTCCTTaGACCCACTTCTTCATAGCTTGTGAGAACATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QASSSWASSVFP*THFFIACENMN Trigger: ATTCATGTTCTCACAAGCTATGAAGAAGTGGGTGCAAGGAAATACTGACGAGGCCCAAGAAGAGCTAGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102650.10 |
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| CDS CAA 90 bp | AATATGGAAGGACAACAGTGTCACGCAAGACTTGTTCAAGGGTCTTaGAAAGACTGGATTTGGTCTCTTGAGTCTGATAGTCCAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: NMEGQQCHARLVQGS*KDWIWSLESDSPDR Trigger: CCTGTCTGGACTATCAGACTCAAGAGACCAAATCCAGTCTTTCAAAGACCCTTGAACAAGTCTTGCGTGACACTGTTGTCCTTCCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 72 bp | CTGGTCAGCACTTCAATCTGGTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTAAAGTGCTCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVSTSIWYLQKW*LRRNSLKCSCS Trigger: GGAGCAAGAGCACTTTAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATACCAGATTGAAGTGCTGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CCA 72 bp | CACAGAAGAGGATATCAGCCAGGTAAACAGTCCCACTaGTCAGCACTTCAATCTGGTATTTACAGAAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRRGYQPGKQSH*SALQSGIYRNG Trigger: ACCATTTCTGTAAATACCAGATTGAAGTGCTGACCAGTGGGACTGTTTACCTGGCTGATATCCTCTTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CAA 72 bp | GGACAACAGTGTCACGCAAGACTTGTTCAAGGGTCTTaGAAAGACTGGATTTGGTCTCTTGAGTCTGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: GQQCHARLVQGS*KDWIWSLESDS Trigger: ACTATCAGACTCAAGAGACCAAATCCAGTCTTTCAAAGACCCTTGAACAAGTCTTGCGTGACACTGTTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CCA 72 bp | CTCCATTCTCCGAAGTTCCATAAACTGAAGGAAATATaGAAGGACAACAGTGTCACGCAAGACTTGTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LHSPKFHKLKEI*KDNSVTQDLFK Trigger: CTTGAACAAGTCTTGCGTGACACTGTTGTCCTTCCATATTTCCTTCAGTTTATGGAACTTCGGAGAATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CCA 72 bp | GATGATGTCGTTTCTCATGGCTTCTGTAATTGGTATTaGCTTAGCAGCATCTGGAGATATATATTTGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DDVVSHGFCNWY*LSSIWRYIFGK Trigger: TTTACCAAATATATATCTCCAGATGCTGCTAAGCCAATACCAATTACAGAAGCCATGAGAAACGACATCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS TCA 72 bp | TCCCTCCAAGAAATTCATCTCCTCGAACTGAATGGATaGGATCATTCAAATATTTGTAATAAAGATTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLQEIHLLELNG*DHSNICNKDCW Trigger: CCAGCAATCTTTATTACAAATATTTGAATGATCTCATCCATTCAGTTCGAGGAGATGAATTTCTTGGAGGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 ENSMUST00000108710.2 |
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| CDS CAA 72 bp | CATATGTCCGTTGATATAAAGATTCTGGGTCCAGACTaGCAGCATCCACAATTATTGCTTCATCAAAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: HMSVDIKILGPD*QHPQLLLHQNF Trigger: AAAATTTTGATGAAGCAATAATTGTGGATGCTGCAAGTCTGGACCCAGAATCTTTATATCAACGGACATATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058173.12 ENSMUST00000102650.10 |
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