Pregenerated sensors for AK7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041323Ensembl transcript IDs: ENSMUST00000040876.7
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACATGGGTTTTGTGCAGTTTGTGGTGATCAGGGGTAGCATTATTTaGCTCGACCCATGCATGTCCCATCATAAGCTCTTCAGTTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: YMGFVQFVVIRGSII*LDPCMSHHKLFSSL Trigger: CAGAGAACTGAAGAGCTTATGATGGGACATGCATGGGTCGAGGCAAATAATGCTACCCCTGATCACCACAAACTGCACAAAACCCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTAGAATCCTGGCCACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGGCCTGGTGTTTACTGTaGGCAATGCAAGTGTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: WLESWPLTGNLTGKQSHLAWCLL*AMQVCL Trigger: CAGGCACACTTGCATTGCTCACAGTAAACACCAGGC...CAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGGCCAGGATTCTAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGGCCTCGTGTTTACTGTaGGCAATGCAAGTGTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: THGQPYRKAVTPDGRFNKASCLL*AMQVCL Trigger: GAGGCACACTTGCATTGCTCACAGTAAACACGAGGC...CTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR-3UTR GCA 90 bp | GTGGCTAGAATCCTGGCCACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTTTGATCTGTGAGCCATaGAAGTGTGCCTGGTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VARILATHGQPYRKAVTPLICEP*KCAWCL Trigger: TAAACACCAGGCACACTTGCATGGCTCACAGATCAA...AGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGGCCAGGATTCTAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGTAATAGTAAACCATTGATCTGTGAGCCATGCAAGTGTGCCTGGTGTTTAGCCTGGTGTTTACTGTaGGCAATGCAAGTGTGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSNSKPLICEPCKCAWCLAWCLL*AMQVCL Trigger: GAGGCACACTTGCATTGCTCACAGTAAACACCAGGC...TAAACACCAGGCACACTTGCATGGCTCACAGATCAATGGTTTACTATTACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGTAATAGTAAACCATTGATCTGTGAGCCATGCAAGTGTGCCTGGTGTTTACAAACATCCTTTCAATaGGATAGCAGTTATTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: KSNSKPLICEPCKCAWCLQTSFQ*DSSYSL Trigger: CAGTGAATAACTGCTATCTCATTGAAAGGATGTTTG...TAAACACCAGGCACACTTGCATGGCTCACAGATCAATGGTTTACTATTACTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR TCA 72 bp | CACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTaGTGGGAGGTTCAACAAGCAGGGGCCATTGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HSRATLQESSHT*WEVQQAGAIVK Trigger: CTTTACAATGGCCCCTGCTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR TCA 72 bp | ATCTGTGAGCCATGCAAGTGTGCCTGGTGTTTACTGTaGGCAATGCAAGTGTGCCTGGTGTTTACTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ICEPCKCAWCLL*AMQVCLVFTVS Trigger: GCTCACAGTAAACACCAGGCACACTTGCATTGCTCACAGTAAACACCAGGCACACTTGCATGGCTCACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR CCA 72 bp | AAGCTCTTCAGTTCTCTGACTAAGTGGCTAGAATCCTaGCCACTCACGGGCAACCTTACAGGAAAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLFSSLTKWLES*PLTGNLTGKQS Trigger: TGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGGCCAGGATTCTAGCCACTTAGTCAGAGAACTGAAGAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR TCA 72 bp | TACTGTGAGCAATGCAAGTGTGCCTGGTGTTTACTGTaGGCAATGCAAGTGTGCCTCGTGTTTACTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YCEQCKCAWCLL*AMQVCLVFTVS Trigger: GCTCACAGTAAACACGAGGCACACTTGCATTGCTCACAGTAAACACCAGGCACACTTGCATTGCTCACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR CCA 72 bp | ATGTCCCATCATAAGCTCTTCAGTTCTCTGACTAAGTaGCTAGAATCCTGGCCACTCACGGGCAACCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: MSHHKLFSSLTK*LESWPLTGNLT Trigger: TGTAAGGTTGCCCGTGAGTGGCCAGGATTCTAGCCACTTAGTCAGAGAACTGAAGAGCTTATGATGGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR GCA 72 bp | TTTGTGCAGTTTGTGGTGATCAGGGGTAGCATTATTTaGCTCGACCCATGCATGTCCCATCATAAGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FVQFVVIRGSII*LDPCMSHHKLF Trigger: GAAGAGCTTATGATGGGACATGCATGGGTCGAGGCAAATAATGCTACCCCTGATCACCACAAACTGCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR TCA 72 bp | TACTGTGAGCAATGCAAGTGTGCCTCGTGTTTACTGTaGGCAATGCAAGTGTGCCTCCTGTTTACTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YCEQCKCASCLL*AMQVCLLFTFQ Trigger: TTGGAAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAACACGAGGCACACTTGCATTGCTCACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR GCA 72 bp | AGCAATGCAAGTGTGCCTCGTGTTTACTGTGAGCAATaGAAGTGTGCCTCCTGTTTACTTTCCAAACATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SNASVPRVYCEQ*KCASCLLSKHP Trigger: AGGATGTTTGGAAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAACACGAGGCACACTTGCATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR TCA 72 bp | GTGTGCCTCCTGTTTACTTTCCAAACATCCTTTCAATaGGATAGCAGTTATTCACTGCAGTGTAGTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VCLLFTFQTSFQ*DSSYSLQCSFL Trigger: TAGAAAACTACACTGCAGTGAATAACTGCTATCTCATTGAAAGGATGTTTGGAAAGTAAACAGGAGGCACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| 3UTR TCA 72 bp | AAGTTACTACAAATGTGTTATGTGCAGCGTTGTGACTaGCCTAAGAGTAATAGTAAACCATTGATCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLLQMCYVQRCD*PKSNSKPLICE Trigger: CTCACAGATCAATGGTTTACTATTACTCTTAGGTCAGTCACAACGCTGCACATAACACATTTGTAGTAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTAGAATCCTGGCCACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGAGGTCTTCCAAGGTGTaGACAGCCTCATCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLESWPLTGNLTGKQSHLRSSKV*TASSTA Trigger: GGCTGTGGATGAGGCTGTGCACACCTTGGAAGACCT...CAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGGCCAGGATTCTAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGCAGGGGCCATTGTTCGCACTCCATGAGATaGGAGAGCAGGTCTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTGKQSHLMGGSTSRGHCSHSMR*ESRSSR Trigger: CCGGGAAGACCTGCTCTCGCATCTCATGGAGTGCGA...ACAATGGCCCCTGCTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | TGGCTAGAATCCTGGCCACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGAAGGTGCCCACGATCTaGAAGGTGCCTTCCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: WLESWPLTGNLTGKQSHLKVPTI*KVPSFT Trigger: AGTGAAGGAAGGCACCTTCCAGATCGTGGGCACCTT...CAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGGCCAGGATTCTAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | CCACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACATCCAATCTCTTCCAGTaGAGCCCCAGCGACACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLTGNLTGKQSHLMGGSTSNLFQ*SPSDTV Trigger: AACTGTGTCGCTGGGGCTTCACTGGAAGAGATTGGA...TGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | TCTACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGCCTTGAAGAGATACTCTaGCAGAAAATCCACGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: STLLGFPLATPIPNLPTRLEEIL*QKIHGV Trigger: GACCCCGTGGATTTTCTGGCAGAGTATCTCTTCAAG...GCGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | TTCTACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGTCCATACTGAAGTCCTaGGGCGACTACATAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYIIRIPPRYSHSQPPHPSILKS*GDYISC Trigger: GCAACTTATGTAGTCGCCTCAGGACTTCAGTATGGA...CGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGTAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | TCTACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGCTCGATATGTATCGGGTaGATTTCAAGCTCGTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STLLGFPLATPIPNLPTRSICIG*ISSSSK Trigger: CTTCGACGAGCTTGAAATTCACCCGATACATATCGA...GCGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | TTCTACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGAAGGCTTCCTCCACTTaGTGCACATTCTCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FYIIRIPPRYSHSQPPHPKASST*CTFSVM Trigger: CATCACAGAGAATGTGCAGCAAGTGGAGGAAGCCTT...CGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGTAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | CTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGCAGGGGCCATTGTCCAGCTCTTCAGAGATaGTGGATTTTCCCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGKQSHLMGGSTSRGHCPALQR*WIFPQQ Trigger: CTGCTGTGGGAAAATCCAGCATCTCTGAAGAGCTGG...ACAATGGCCCCTGCTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | AATGCAAGTGTGCCTGGTGTTTACTGTGAGCAATGCAAGTGTGCCTCGTGTTTACAGGCGTTCCTCCGCTaGTTTCTTCTCCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NASVPGVYCEQCKCASCLQAFLR*FLLLLC Trigger: GCAGAGGAGGAGAAGAAAGCAGCGGAGGAACGCCTG...TAAACACGAGGCACACTTGCATTGCTCACAGTAAACACCAGGCACACTTGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | TTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGCCAAAAATGGTCTATGATGTTCTaGATCACTCCTGCGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGFPLATPIPNLPTRQKWSMMF*ITPARS Trigger: TGACCTCGCAGGAGTGATCCAGAACATCATAGACCA...TTTTTGGCGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | GGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGCAGGGGCCATTGTAAAGTCTCTTTGGGCACTTTCTaGATCTTTCCAGGGCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKQSHLMGGSTSRGHCKVSLGTF*IFPGPV Trigger: TACCGGCCCTGGAAAGATCCAGAAAGTGCCCAAAGA...GACTTTACAATGGCCCCTGCTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | CCACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACATCCTCTTCCTCTTCCTaGTTGAACAGGTCTTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTGNLTGKQSHLMGGSTSSSSS*LNRSFA Trigger: AGCGAAAGACCTGTTCAACCAGGAAGAGGAAGAGGA...TGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | CTGGTGTTTACTGTGAGCAATGCAAGTGTGCCTGGTGTTTACTGTGAGCAATGCTGGGCACGTGGTCTATaGTGTTCTGGATCACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVFTVSNASVPGVYCEQCWARGL*CSGSLL Trigger: CAGGAGTGATCCAGAACATCATAGACCACGTGCCCA...GCATTGCTCACAGTAAACACCAGGCACACTTGCATTGCTCACAGTAAACACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | ATCAGGGGTAGCATTATTTGCCTCGACCCATGCATGTCCCATCATAAGCTCTTCCTCTTCTCCTTCCACTaGGTCCTTGGGTGCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRGSIICLDPCMSHHKLFLFSFH*VLGCDN Trigger: ATTGTCGCACCCAAGGACTCAGTGGAAGGAGAAGAG...GAAGAGCTTATGATGGGACATGCATGGGTCGAGGCAAATAATGCTACCCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | ATCAGGGGTAGCATTATTTGCCTCGACCCATGCATGTCCCATCATAAGCTCTTCAGCCGACCTGCGTTCTaGTCCATGCTTTCCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IRGSIICLDPCMSHHKLFSRPAF*SMLSLM Trigger: CATCAAGGAAAGCATGGAGCAGAACGCAGGTCGGCT...GAAGAGCTTATGATGGGACATGCATGGGTCGAGGCAAATAATGCTACCCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | TCTACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGCCTGTCGACAACAAAATaGACACCTTTCGCTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: STLLGFPLATPIPNLPTRLSTTK*TPFAFQ Trigger: TTGAAAAGCGAAAGGTGTTCATTTTGTTGTCGACAG...GCGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | AATGCAAGTGTGCCTGGTGTTTACTGTGAGCAATGCAAGTGTGCCTCGTGTTTACCTTCTGCTCCATACTaGAGTCCTGAGGCGACTACA | + |
|
Preference number: 4 (lower is better) Translates to: NASVPGVYCEQCKCASCLPSAPY*SPEATT Trigger: TGTAGTCGCCTCAGGACTTCAGTATGGAGCAGAAGG...TAAACACGAGGCACACTTGCATTGCTCACAGTAAACACCAGGCACACTTGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | CAACAAGCAGGGGCCATTGTAAAGTCTTTCATTTCTGACACCTTTGGAGCCTATCTTCCATTCTCAGGTTaGCCAGCAGGTGGTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQAGAIVKSFISDTFGAYLPFSG*PAGGRG Trigger: ACCTCGACCACCTGCTGGTCAACCTGAGAATGGAAG...ATAGGCTCCAAAGGTGTCAGAAATGAAAGACTTTACAATGGCCCCTGCTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGCCTCGTGTTTACTGTGAGCAATGCAAGTGTGCCTCCTGTTTACTTTGCTCCATGCTTTCCTTaGTGCCATCAAGGAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVCLVFTVSNASVPPVYFAPCFP*CHQGAP Trigger: AGGAGCTCCTTGATGGCATCAAGGAAAGCATGGAGC...AAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAACACGAGGCACACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGCCTCGTGTTTACTGTGAGCAATGCAAGTGTGCCTCCTGTTTACTTTTGGCCGGAATGCAATTaGTCCCATCTCCAAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: QVCLVFTVSNASVPPVYFWPECN*SHLQTR Trigger: CCGTGTTTGGAGATGGGACCAATTGCATTCCGGCCA...AAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAACACGAGGCACACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | ACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGCCAAAATCGAATTATATATTaGTCTTCTAGCCGACCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLGFPLATPIPNLPTRQNRIIY*SSSRPA Trigger: CGCAGGTCGGCTAGAAGACCAATATATAATTCGATT...TTGGCGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | CCACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACATCACATCCTTCATCTTaGTGTGATGCAGTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLTGNLTGKQSHLMGGSTSHPSS*CDAVCS Trigger: ACTACAAACTGCATCACATCAAGATGAAGGATGTGA...TGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | ATCAGGGGTAGCATTATTTGCCTCGACCCATGCATGTCCCATCATAAGCTCTTCGATTTCTTCATTCAATaGGGAGACTGCCCACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRGSIICLDPCMSHHKLFDFFIQ*GDCPQG Trigger: GCCTTGTGGGCAGTCTCCGCATTGAATGAAGAAATC...GAAGAGCTTATGATGGGACATGCATGGGTCGAGGCAAATAATGCTACCCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | CTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGCAGGGGCCATTGTATAGCAAGTCTGTTCTaGGCGTCTTCAAGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGKQSHLMGGSTSRGHCIASLF*ASSSFP Trigger: AGGAAAACTTGAAGACGCCCAGAACAGACTTGCTAT...ACAATGGCCCCTGCTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGCCTCGTGTTTACTGTGAGCAATGCAAGTGTGCCTCCTGTTTACTTTCAATCGCCTCCAGTTTaGCTATGGCTTCAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QVCLVFTVSNASVPPVYFQSPPV*LWLQQS Trigger: TGATTGCTGAAGCCATAGCCAAACTGGAGGCGATTG...AAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAACACGAGGCACACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGCCTCGTGTTTACTGTGAGCAATGCAAGTGTGCCTCCTGTTTACTTTGGAAGCCATCCAAAATaGAACCTTGGTTCCTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVCLVFTVSNASVPPVYFGSHPK*NLGSYK Trigger: CTTGTAGGAACCAAGGTTTCATTTTGGATGGCTTCC...AAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAACACGAGGCACACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | AATGCAAGTGTGCCTGGTGTTTACTGTGAGCAATGCAAGTGTGCCTCGTGTTTAAGTAATCCCCGGCTTTaGTTGTACTCTTTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NASVPGVYCEQCKCASCLSNPRL*LYSLRM Trigger: CATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACT...TAAACACGAGGCACACTTGCATTGCTCACAGTAAACACCAGGCACACTTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | CTTTCCAAACATCCTTTCAATGAGATAGCAGTTATTCACTGCAGTGTAGTTTTCCAGGGTCCAGGGGTTTaGATCTCGCCCATGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKHPFNEIAVIHCSVVFQGPGV*ISPMSS Trigger: TGATGACATGGGCGAGATCCAAACCCCTGGACCCTG...GAAAACTACACTGCAGTGAATAACTGCTATCTCATTGAAAGGATGTTTGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | GTGGTGATCAGGGGTAGCATTATTTGCCTCGACCCATGCATGTCCCATCATAAGTTGATCATAGGTCTTTaGGAAGCCATCCAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVIRGSIICLDPCMSHHKLIIGL*EAIQNE Trigger: TTCATTTTGGATGGCTTCCCAAAGACCTATGATCAA...CTTATGATGGGACATGCATGGGTCGAGGCAAATAATGCTACCCCTGATCACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | TGCAAGTGTGCCTCCTGTTTACTTTCCAAACATCCTTTCAATGAGATAGCAGTTTCTCATCATCTGTATTaGTGTCCCGGTAGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKCASCLLSKHPFNEIAVSHHLY*CPGSGS Trigger: TGAGCCACTACCGGGACATCAATACAGATGATGAGA...AACTGCTATCTCATTGAAAGGATGTTTGGAAAGTAAACAGGAGGCACACTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR TCA 90 bp | CAACAAGCAGGGGCCATTGTAAAGTCTTTCATTTCTGACACCTTTGGAGCCTATGCTTTTCAAAATGGCTaGTTTCTTCATTCAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QQAGAIVKSFISDTFGAYAFQNG*FLHSMR Trigger: CCGCATTGAATGAAGAAATCAGCCATTTTGAAAAGC...ATAGGCTCCAAAGGTGTCAGAAATGAAAGACTTTACAATGGCCCCTGCTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | AAGAGTAATAGTAAACCATTGATCTGTGAGCCATGCAAGTGTGCCTGGTGTTTATATGGTCCAGGAAGTTaGGGTGATGTTTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSNSKPLICEPCKCAWCLYGPGS*GDVSFF Trigger: GAAGAAGGAAACATCACCCCAACTTCCTGGACCATA...TAAACACCAGGCACACTTGCATGGCTCACAGATCAATGGTTTACTATTACTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | CTTTCCAAACATCCTTTCAATGAGATAGCAGTTATTCACTGCAGTGTAGTTTTCCCTCCAGTTTGGCTATaGCTTCAGCAATCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKHPFNEIAVIHCSVVFPPVWL*LQQSHP Trigger: AGGATGTGATTGCTGAAGCCATAGCCAAACTGGAGG...GAAAACTACACTGCAGTGAATAACTGCTATCTCATTGAAAGGATGTTTGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CCA 90 bp | CGTGTTTACTGTGAGCAATGCAAGTGTGCCTCCTGTTTACTTTCCAAACATCCTTCCAAAATGAAACCTTaGTTCCTACAAGGCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVYCEQCKCASCLLSKHPSKMKP*FLQGID Trigger: ATCTATGCCTTGTAGGAACCAAGGTTTCATTTTGGA...AGGATGTTTGGAAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAACACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | TGTTGTAACATAAGTTACTACAAATGTGTTATGTGCAGCGTTGTGACTGACCTAGCTTCCTCCACTTGCTaGACATTCTCTGTGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CCNISYYKCVMCSVVTDLASSTC*TFSVML Trigger: TAACATCACAGAGAATGTGCAGCAAGTGGAGGAAGC...TAGGTCAGTCACAACGCTGCACATAACACATTTGTAGTAACTTATGTTACAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR GCA 90 bp | TGCAAGTGTGCCTCCTGTTTACTTTCCAAACATCCTTTCAATGAGATAGCAGTTGGCGACTACATAAGTTaGGAACTTTTTGGCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKCASCLLSKHPFNEIAVGDYIS*ELFGIF Trigger: AAAAATGCCAAAAAGTTCGCAACTTATGTAGTCGCC...AACTGCTATCTCATTGAAAGGATGTTTGGAAAGTAAACAGGAGGCACACTTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 90 bp | TTCTCCGCCATCTCCATGGCCTCCTTGTGTTCGAGTTCTGCCGTCTaGGCAGCCTCCTTGGCCAGGCGTTCCTCCGCTGCTTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSAISMASLCSSSAV*AASLARRSSAAFFS Trigger: GGAGAAGAAAGCAGCGGAGGAACGCCTGGCCAAGGAGGCTGCTCAGACGGCAGAACTCGAACACAAGGAGGCCATGGAGATGGCGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 90 bp | GTGGCTCAGAGACCGGAGGAATCGGTCCTGGCTGTAGTGAGTTCCTaGCACGACACTCTCCGGGAGATTCATCACCCGCTCCTTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VAQRPEESVLAVVSS*HDTLREIHHPLLQE Trigger: TTCCTGAAGGAGCGGGTGATGAATCTCCCGGAGAGTGTCGTGGCAGGAACTCACTACAGCCAGGACCGATTCCTCCGGTCTCTGAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 90 bp | GATGCCCTTATAAGCCTCCACAGCGAAGTCTGGCTTGACACTCTCTaGCTTGACCAAGGTGCCCACGATCTGGAAGGTGCCTTCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DALISLHSEVWLDTL*LDQGAHDLEGAFLH Trigger: GTGAAGGAAGGCACCTTCCAGATCGTGGGCACCTTGGTCAAGCCAGAGAGTGTCAAGCCAGACTTCGCTGTGGAGGCTTATAAGGGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 90 bp | CCTCCTCCTCCTCTTCGCCTTCCTCTTCTCCTTCCACTGAGTCCTTaGGTGCGACAATCGCCTCCAGTTTGGCTATGGCTTCAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: PPPPLRLPLLLPLSP*VRQSPPVWLWLQQS Trigger: TGATTGCTGAAGCCATAGCCAAACTGGAGGCGATTGTCGCACCCAAGGACTCAGTGGAAGGAGAAGAGGAAGGCGAAGAGGAGGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 90 bp | GGTGCCTTCCTTCACTTTTGTAGTGGGGGCTTCTGGAGCTACAGCTaGCTTTGTCTCGTCCTCCTCCTCCTCCTCCTCTCCAATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAFLHFCSGGFWSYS*LCLVLLLLLLSNLF Trigger: GAAGAGATTGGAGAGGAGGAGGAGGAGGAGGACGAGACAAAGTCAGCTGTAGCTCCAGAAGCCCCCACTACAAAAGTGAAGGAAGGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 90 bp | CCTCATCCACAGCCACCAGGTAGTGAAGCTTGGGCACGTGGTCTATaGTGTTCTGGATCACTCCTGCGAGGTCAACAACATGAATGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PHPQPPGSEAWARGL*CSGSLLRGQQHEWP Trigger: CGGCCATTCATGTTGTTGACCTCGCAGGAGTGATCCAGAACATCATAGACCACGTGCCCAAGCTTCACTACCTGGTGGCTGTGGATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 90 bp | AAGTCTGGCTTGACACTCTCTGGCTTGACCAAGGTGCCCACGATCTaGAAGGTGCCTTCCTTCACTTTTGTAGTGGGGGCTTCTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KSGLTLSGLTKVPTI*KVPSFTFVVGASGA Trigger: AGCTCCAGAAGCCCCCACTACAAAAGTGAAGGAAGGCACCTTCCAGATCGTGGGCACCTTGGTCAAGCCAGAGAGTGTCAAGCCAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | ACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGGCTTCCATTCTCAGGTaGACCAGCAGGTGGTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: THGQPYRKAVTPDGRFNKASILR*TSRWSR Trigger: CCTCGACCACCTGCTGGTCAACCTGAGAATGGAAGC...CTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | ACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGGAGCTACAGCTGACTTaGTCTCGTCCTCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: THGQPYRKAVTPDGRFNKELQLT*SRPPPP Trigger: AGGAGGAGGAGGACGAGACAAAGTCAGCTGTAGCTC...CTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 90 bp | CCAGGAAGTTGGGGTGATGTTTCCTTCTTCGATAATCCTCTTCTGTaGAGGGAACCTCGTTGTCGTCAGGGTCCAGGGGTTTGGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGSWGDVSFFDNPLL*REPRCRQGPGVWIS Trigger: CGAGATCCAAACCCCTGGACCCTGACGACAACGAGGTTCCCTTCACAGAAGAGGATTATCGAAGAAGGAAACATCACCCCAACTTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | TCTACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGCGGCTTCCCGATCTCTTaGATGAGCTGTTTGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: STLLGFPLATPIPNLPTRGFPIS*MSCLIA Trigger: TGCTATCAAACAGCTCATCAAAGAGATCGGGAAGCC...GCGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 90 bp | GGAGGACCAAGGATGCAGATCTTGATTGGCAGTAATCCCCGGCTTTaGTTGTACTCTTTGAGGATGCTGTTGATGTTCTCCACGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGPRMQILIGSNPRL*LYSLRMLLMFSTKP Trigger: AGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACTGCCAATCAAGATCTGCATCCTTGGTCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 90 bp | TTGTACTCTTTGAGGATGCTGTTGATGTTCTCCACGAAGCCTGTTTaGGCGACCCAGCGGATGTTAAAGTTCTCCTTCACAAACAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYSLRMLLMFSTKPV*ATQRMLKFSFTNRA Trigger: AGCCCTGTTTGTGAAGGAGAACTTTAACATCCGCTGGGTCGCCCAAACAGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGAGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | TCTACATTATTAGGATTCCCCCTCGCTACTCCCATTCCCAACCTCCCCACCCGCCTTGTGTCAAGTCCTTaGTCAGGAAAGCATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: STLLGFPLATPIPNLPTRLVSSP*SGKHFL Trigger: AAGAAAATGCTTTCCTGACAAAGGACTTGACACAAG...GCGGGTGGGGAGGTTGGGAATGGGAGTAGCGAGGGGGAATCCTAATAATGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 90 bp | TCGCCTCCAGTTTGGCTATGGCTTCAGCAATCACATCCTTCATCTTaGTGTGATGCAGTTTGTAGTACTTGGCCAGCTCTTCAGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SPPVWLWLQQSHPSS*CDAVCSTWPALQRC Trigger: GCATCTCTGAAGAGCTGGCCAAGTACTACAAACTGCATCACATCAAGATGAAGGATGTGATTGCTGAAGCCATAGCCAAACTGGAGGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | ACTCACGGGCAACCTTACAGGAAAGCAGTCACACCTGATGGGAGGTTCAACAAGCTTTGCTTGTACTCTTaGAGGATGCTGTTGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: THGQPYRKAVTPDGRFNKLCLYS*RMLLMF Trigger: GAACATCAACAGCATCCTCAAAGAGTACAAGCAAAG...CTTGTTGAACCTCCCATCAGGTGTGACTGCTTTCCTGTAAGGTTGCCCGTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 90 bp | TGTGTCAAGTCCTTTGTCAGGAAAGCATTTTCTTTGGGCACTTTCTaGATCTTTCCAGGGCCGGTATTTTTGCTGATGCACTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVKSFVRKAFSLGTF*IFPGPVFLLMHLTR Trigger: CCTGGTCAAGTGCATCAGCAAAAATACCGGCCCTGGAAAGATCCAGAAAGTGCCCAAAGAAAATGCTTTCCTGACAAAGGACTTGACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | TTTACTGTGAGCAATGCAAGTGTGCCTCCTGTTTACTTTCCAAACATCCTTTCACCAGGGCCGGTATTTTaGCTGATGCACTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FTVSNASVPPVYFPNILSPGPVF*LMHLTR Trigger: CCTGGTCAAGTGCATCAGCAAAAATACCGGCCCTGG...TGAAAGGATGTTTGGAAAGTAAACAGGAGGCACACTTGCATTGCTCACAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTGTTTACTGTGAGCAATGCAAGTGTGCCTGGTGTTTACTGTGAGCAATGCTCTTTGATGAGCTGTTaGATAGCAAGTCTGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVFTVSNASVPGVYCEQCSLMSC*IASLFW Trigger: CCAGAACAGACTTGCTATCAAACAGCTCATCAAAGA...GCATTGCTCACAGTAAACACCAGGCACACTTGCATTGCTCACAGTAAACACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 90 bp | GGAACTTTCCTATGTTTCCGCTGCTATAGGTGTCCAGATGGTTTATaGATACCCTCTGTATCTTCAGAACTTTTTCGGTGGTCGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GTFLCFRCYRCPDGL*IPSVSSELFRWSQE Trigger: TTCCTGCGACCACCGAAAAAGTTCTGAAGATACAGAGGGTATTCATAAACCATCTGGACACCTATAGCAGCGGAAACATAGGAAAGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 90 bp | TTCCTCTTCCTGGTTGAACAGGTCTTTCGCTTGATCATAGGTCTTTaGGAAGCCATCCAAAATGAAACCTTGGTTCCTACAAGGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLFLVEQVFRLIIGL*EAIQNETLVPTRHR Trigger: TCTATGCCTTGTAGGAACCAAGGTTTCATTTTGGATGGCTTCCCAAAGACCTATGATCAAGCGAAAGACCTGTTCAACCAGGAAGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGGGGTAGCATTATTTGCCTCGACCCATGCATGTCCCATCATAAGCTCTTCAGGAAAGCATTTTCTTaGGGCACTTTCTGGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IRGSIICLDPCMSHHKLFRKAFS*GTFWIF Trigger: AAAGATCCAGAAAGTGCCCAAAGAAAATGCTTTCCT...GAAGAGCTTATGATGGGACATGCATGGGTCGAGGCAAATAATGCTACCCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTGTTTACTGTGAGCAATGCAAGTGTGCCTGGTGTTTACTGTGAGCAATGCATCCAAAATGAAACCTaGGTTCCTACAAGGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVFTVSNASVPGVYCEQCIQNET*VPTRHR Trigger: TCTATGCCTTGTAGGAACCAAGGTTTCATTTTGGAT...GCATTGCTCACAGTAAACACCAGGCACACTTGCATTGCTCACAGTAAACACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | TGCAAGTGTGCCTCCTGTTTACTTTCCAAACATCCTTTCAATGAGATAGCAGTTTCTTTGAGGATGCTGTaGATGTTCTCCACGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CKCASCLLSKHPFNEIAVSLRML*MFSTKP Trigger: AGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGA...AACTGCTATCTCATTGAAAGGATGTTTGGAAAGTAAACAGGAGGCACACTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | CTTTCCAAACATCCTTTCAATGAGATAGCAGTTATTCACTGCAGTGTAGTTTTCCAAGGCTTCCTCCACTaGCTGCACATTCTCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSKHPFNEIAVIHCSVVFQGFLH*LHILCD Trigger: ATCACAGAGAATGTGCAGCAAGTGGAGGAAGCCTTG...GAAAACTACACTGCAGTGAATAACTGCTATCTCATTGAAAGGATGTTTGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | CTTTCCAAACATCCTTTCAATGAGATAGCAGTTATTCACTGCAGTGTAGTTTTCGAACAGGTCTTTCGCTaGATCATAGGTCTTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSKHPFNEIAVIHCSVVFEQVFR*IIGLWE Trigger: TTCCCAAAGACCTATGATCAAGCGAAAGACCTGTTC...GAAAACTACACTGCAGTGAATAACTGCTATCTCATTGAAAGGATGTTTGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS-3UTR CAA 90 bp | CTTTCCAAACATCCTTTCAATGAGATAGCAGTTATTCACTGCAGTGTAGTTTTCTACTGCATTTCAGGATaGTTCTTGAAGAGATACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSKHPFNEIAVIHCSVVFYCISG*FLKRYS Trigger: AGAGTATCTCTTCAAGAACAATCCTGAAATGCAGTA...GAAAACTACACTGCAGTGAATAACTGCTATCTCATTGAAAGGATGTTTGGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 72 bp | CTCCGCCATCTCCATGGCCTCCTTGTGTTCGAGTTCTaGCGTCTGAGCAGCCTCCTTGGCCAGGCGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRHLHGLLVFEF*RLSSLLGQAFL Trigger: GAGGAACGCCTGGCCAAGGAGGCTGCTCAGACGGCAGAACTCGAACACAAGGAGGCCATGGAGATGGCGGAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 72 bp | AGACCGGAGGAATCGGTCCTGGCTGTAGTGAGTTCCTaGCACGACACTCTCCGGGAGATTCATCACCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPEESVLAVVSS*HDTLREIHHPL Trigger: GAGCGGGTGATGAATCTCCCGGAGAGTGTCGTGGCAGGAACTCACTACAGCCAGGACCGATTCCTCCGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 72 bp | CCTTGTGTTCGAGTTCTGCCGTCTGAGCAGCCTCCTTaGCCAGGCGTTCCTCCGCTGCTTTCTTCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCVRVLPSEQPP*PGVPPLLSSPP Trigger: AGGAGGAGAAGAAAGCAGCGGAGGAACGCCTGGCCAAGGAGGCTGCTCAGACGGCAGAACTCGAACACAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | GCCTCCACAGCGAAGTCTGGCTTGACACTCTCTGGCTaGACCAAGGTGCCCACGATCTGGAAGGTGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASTAKSGLTLSG*TKVPTIWKVPS Trigger: GGAAGGCACCTTCCAGATCGTGGGCACCTTGGTCAAGCCAGAGAGTGTCAAGCCAGACTTCGCTGTGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TCCACGGGGTCTTCGGGTCTCACCTTGCAGCATTCATaGAGGCCCTGCATGAGCGTGGGCATCACGTACGTC | + |
|
Preference number: 6 (lower is better) Translates to: STGSSGLTLQHS*RPCMSVGITYV Trigger: GACGTACGTGATGCCCACGCTCATGCAGGGCCTCAATGAATGCTGCAAGGTGAGACCCGAAGACCCCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TCTGCCAGAAAATCCACGGGGTCTTCGGGTCTCACCTaGCAGCATTCATTGAGGCCCTGCATGAGCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SARKSTGSSGLT*QHSLRPCMSVG Trigger: GCCCACGCTCATGCAGGGCCTCAATGAATGCTGCAAGGTGAGACCCGAAGACCCCGTGGATTTTCTGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 72 bp | ATAAGCCTCCACAGCGAAGTCTGGCTTGACACTCTCTaGCTTGACCAAGGTGCCCACGATCTGGAAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ISLHSEVWLDTL*LDQGAHDLEGA Trigger: GGCACCTTCCAGATCGTGGGCACCTTGGTCAAGCCAGAGAGTGTCAAGCCAGACTTCGCTGTGGAGGCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 72 bp | CTTCACTTTTGTAGTGGGGGCTTCTGGAGCTACAGCTaGCTTTGTCTCGTCCTCCTCCTCCTCCTCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHFCSGGFWSYS*LCLVLLLLLLS Trigger: GGAGAGGAGGAGGAGGAGGAGGACGAGACAAAGTCAGCTGTAGCTCCAGAAGCCCCCACTACAAAAGTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 72 bp | CCTCTTCGCCTTCCTCTTCTCCTTCCACTGAGTCCTTaGGTGCGACAATCGCCTCCAGTTTGGCTATGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLRLPLLLPLSP*VRQSPPVWLWL Trigger: AAGCCATAGCCAAACTGGAGGCGATTGTCGCACCCAAGGACTCAGTGGAAGGAGAAGAGGAAGGCGAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TCCTCTTCGCCTTCCTCTTCTCCTTCCACTGAGTCCTaGGGTGCGACAATCGCCTCCAGTTTGGCTATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSPSSSPSTES*GATIASSLAMA Trigger: AGCCATAGCCAAACTGGAGGCGATTGTCGCACCCAAGGACTCAGTGGAAGGAGAAGAGGAAGGCGAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TCTTCTAGCCGACCTGCGTTCTGCTCCATGCTTTCCTaGATGCCATCAAGGAGCTCCTGGGCATCATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSSRPAFCSMLS*MPSRSSWASST Trigger: CGTGGATGATGCCCAGGAGCTCCTTGATGGCATCAAGGAAAGCATGGAGCAGAACGCAGGTCGGCTAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | GGCACTTTCTGGATCTTTCCAGGGCCGGTATTTTTGCTGATGCACTaGACCAGGTCTTCCAAGGTGTGCACAGCCTCATCCACAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GTFWIFPGPVFLLMH*TRSSKVCTASSTAT Trigger: GGTGGCTGTGGATGAGGCTGTGCACACCTTGGAAGACCTGGTCAAGTGCATCAGCAAAAATACCGGCCCTGGAAAGATCCAGAAAGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | AAGAGATACTCTGCCAGAAAATCCACGGGGTCTTCGGGTCTCACCTaGCAGCATTCATTGAGGCCCTGCATGAGCGTGGGCATCACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KRYSARKSTGSSGLT*QHSLRPCMSVGITY Trigger: GTACGTGATGCCCACGCTCATGCAGGGCCTCAATGAATGCTGCAAGGTGAGACCCGAAGACCCCGTGGATTTTCTGGCAGAGTATCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 72 bp | TTGACACTCTCTGGCTTGACCAAGGTGCCCACGATCTaGAAGGTGCCTTCCTTCACTTTTGTAGTGGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTLSGLTKVPTI*KVPSFTFVVGA Trigger: AGCCCCCACTACAAAAGTGAAGGAAGGCACCTTCCAGATCGTGGGCACCTTGGTCAAGCCAGAGAGTGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | GTGAAGGGAACCTCGTTGTCGTCAGGGTCCAGGGGTTaGGATCTCGCCCATGTCATCACTGTCGACAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: VKGTSLSSGSRG*DLAHVITVDNK Trigger: TTTGTTGTCGACAGTGATGACATGGGCGAGATCCAAACCCCTGGACCCTGACGACAACGAGGTTCCCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS TCA 72 bp | CAGCCACCAGGTAGTGAAGCTTGGGCACGTGGTCTATaGTGTTCTGGATCACTCCTGCGAGGTCAACAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QPPGSEAWARGL*CSGSLLRGQQH Trigger: ATGTTGTTGACCTCGCAGGAGTGATCCAGAACATCATAGACCACGTGCCCAAGCTTCACTACCTGGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | AATCCCCGGCTTTGCTTGTACTCTTTGAGGATGCTGTaGATGTTCTCCACGAAGCCTGTTTGGGCGACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NPRLCLYSLRML*MFSTKPVWATQ Trigger: CTGGGTCGCCCAAACAGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGAGTACAAGCAAAGCCGGGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | ATATATTGGTCTTCTAGCCGACCTGCGTTCTGCTCCATGCTTTCCTaGATGCCATCAAGGAGCTCCTGGGCATCATCCACGTTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IYWSSSRPAFCSMLS*MPSRSSWASSTFSS Trigger: GGAAGAGAACGTGGATGATGCCCAGGAGCTCCTTGATGGCATCAAGGAAAGCATGGAGCAGAACGCAGGTCGGCTAGAAGACCAATATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 72 bp | GATGCAGTTTGTAGTACTTGGCCAGCTCTTCAGAGATaGTGGATTTTCCCACAGCAGGAGGACCAAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: DAVCSTWPALQR*WIFPQQEDQGC Trigger: GCATCCTTGGTCCTCCTGCTGTGGGAAAATCCAGCATCTCTGAAGAGCTGGCCAAGTACTACAAACTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 72 bp | ACAAACAGGGCTTCCATTCTCAGGTTGACCAGCAGGTaGTCGAGGTACTCTTGTGTCAAGTCCTTTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TNRASILRLTSR*SRYSCVKSFVR Trigger: CCTGACAAAGGACTTGACACAAGAGTACCTCGACCACCTGCTGGTCAACCTGAGAATGGAAGCCCTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TCCACTGAGTCCTTGGGTGCGACAATCGCCTCCAGTTaGGCTATGGCTTCAGCAATCACATCCTTCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: STESLGATIASS*AMASAITSFIL Trigger: CAAGATGAAGGATGTGATTGCTGAAGCCATAGCCAAACTGGAGGCGATTGTCGCACCCAAGGACTCAGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | CTTGTACTCTTTGAGGATGCTGTTGATGTTCTCCACGAAGCCTGTTaGGGCGACCCAGCGGATGTTAAAGTTCTCCTTCACAAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVLFEDAVDVLHEAC*GDPADVKVLLHKQG Trigger: GCCCTGTTTGTGAAGGAGAACTTTAACATCCGCTGGGTCGCCCAAACAGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGAGTACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | ATGCAGATCTTGATTGGCAGTAATCCCCGGCTTTGCTTGTACTCTTaGAGGATGCTGTTGATGTTCTCCACGAAGCCTGTTTGGGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: MQILIGSNPRLCLYS*RMLLMFSTKPVWAT Trigger: GGTCGCCCAAACAGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACTGCCAATCAAGATCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | GAGATGCTGGATTTTCCCACAGCAGGAGGACCAAGGATGCAGATCTaGATTGGCAGTAATCCCCGGCTTTGCTTGTACTCTTTGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: EMLDFPTAGGPRMQI*IGSNPRLCLYSLRM Trigger: CATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACTGCCAATCAAGATCTGCATCCTTGGTCCTCCTGCTGTGGGAAAATCCAGCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 72 bp | TTGAGGATGCTGTTGATGTTCTCCACGAAGCCTGTTTaGGCGACCCAGCGGATGTTAAAGTTCTCCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: LRMLLMFSTKPV*ATQRMLKFSFT Trigger: TGTGAAGGAGAACTTTAACATCCGCTGGGTCGCCCAAACAGGCTTCGTGGAGAACATCAACAGCATCCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TTTGAGGATGCTGTTGATGTTCTCCACGAAGCCTGTTaGGGCGACCCAGCGGATGTTAAAGTTCTCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FEDAVDVLHEAC*GDPADVKVLLH Trigger: GTGAAGGAGAACTTTAACATCCGCTGGGTCGCCCAAACAGGCTTCGTGGAGAACATCAACAGCATCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | GGACCAAGGATGCAGATCTTGATTGGCAGTAATCCCCGGCTTTGCTaGTACTCTTTGAGGATGCTGTTGATGTTCTCCACGAAGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPRMQILIGSNPRLC*YSLRMLLMFSTKPV Trigger: AACAGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACTGCCAATCAAGATCTGCATCCTTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 72 bp | CGAATTATATATTGGTCTTCTAGCCGACCTGCGTTCTaGTCCATGCTTTCCTTGATGCCATCAAGGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RIIYWSSSRPAF*SMLSLMPSRSS Trigger: GGAGCTCCTTGATGGCATCAAGGAAAGCATGGAGCAGAACGCAGGTCGGCTAGAAGACCAATATATAATTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | ATTCAATGCGGAGACTGCCCACAAGGCTTCCTCCACTaGCTGCACATTCTCTGTGATGTTATAGATGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: IQCGDCPQGFLH*LHILCDVIDDS Trigger: GCTGTCATCTATAACATCACAGAGAATGTGCAGCAAGTGGAGGAAGCCTTGTGGGCAGTCTCCGCATTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | CCAGCAGGTGGTCGAGGTACTCTTGTGTCAAGTCCTTaGTCAGGAAAGCATTTTCTTTGGGCACTTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PAGGRGTLVSSP*SGKHFLWALSG Trigger: TCCAGAAAGTGCCCAAAGAAAATGCTTTCCTGACAAAGGACTTGACACAAGAGTACCTCGACCACCTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 90 bp | GATTTCTTCATTCAATGCGGAGACTGCCCACAAGGCTTCCTCCACTaGCTGCACATTCTCTGTGATGTTATAGATGACAGCATCGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: DFFIQCGDCPQGFLH*LHILCDVIDDSIAL Trigger: GAGTGCGATGCTGTCATCTATAACATCACAGAGAATGTGCAGCAAGTGGAGGAAGCCTTGTGGGCAGTCTCCGCATTGAATGAAGAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 72 bp | TTCAAAATGGCTGATTTCTTCATTCAATGCGGAGACTaGCCACAAGGCTTCCTCCACTTGCTGCACATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FKMADFFIQCGD*PQGFLHLLHIL Trigger: GAGAATGTGCAGCAAGTGGAGGAAGCCTTGTGGGCAGTCTCCGCATTGAATGAAGAAATCAGCCATTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS GCA 72 bp | AGGATGCAGATCTTGATTGGCAGTAATCCCCGGCTTTaGTTGTACTCTTTGAGGATGCTGTTGATGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RMQILIGSNPRL*LYSLRMLLMFS Trigger: GGAGAACATCAACAGCATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACTGCCAATCAAGATCTGCATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TTGATTGGCAGTAATCCCCGGCTTTGCTTGTACTCTTaGAGGATGCTGTTGATGTTCTCCACGAAGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LIGSNPRLCLYS*RMLLMFSTKPV Trigger: AACAGGCTTCGTGGAGAACATCAACAGCATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACTGCCAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | ATGCAGATCTTGATTGGCAGTAATCCCCGGCTTTGCTaGTACTCTTTGAGGATGCTGTTGATGTTCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: MQILIGSNPRLC*YSLRMLLMFST Trigger: CGTGGAGAACATCAACAGCATCCTCAAAGAGTACAAGCAAAGCCGGGGATTACTGCCAATCAAGATCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CAA 72 bp | TTCCTCTTCCTCTTCCTGGTTGAACAGGTCTTTCGCTaGATCATAGGTCTTTGGGAAGCCATCCAAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: FLFLFLVEQVFR*IIGLWEAIQNE Trigger: TTCATTTTGGATGGCTTCCCAAAGACCTATGATCAAGCGAAAGACCTGTTCAACCAGGAAGAGGAAGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||
| CDS CCA 72 bp | ATCTCTTTGATGAGCTGTTTGATAGCAAGTCTGTTCTaGGCGTCTTCAAGTTTTCCTACATCGATATGTATC | + |
|
Preference number: 6 (lower is better) Translates to: ISLMSCLIASLF*ASSSFPTSICI Trigger: GATACATATCGATGTAGGAAAACTTGAAGACGCCCAGAACAGACTTGCTATCAAACAGCTCATCAAAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040876.7 |
||