Pregenerated sensors for AK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039058Ensembl transcript IDs: ENSMUST00000045262.11, ENSMUST00000200062.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCACGCTTCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTTaGCACAGGCACAACACAGGCGCTGCCGGACACCGTGTTCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: THASRWDAFTHGAGP*HRHNTGAAGHRVLG Trigger: GCCTAGAACACGGTGTCCGGCAGCGCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAAGCGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 90 bp | CTGCAGCCGGCCCTGAGGCAGGGCTGGAACAGGCAGATCCCACACTaGTCTTTTCATCCAAAGACGAGTGCCAGAGTGGGGACAATTGCC | + |
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Preference number: 1 (lower is better) Translates to: LQPALRQGWNRQIPH*SFHPKTSARVGTIA Trigger: GGCAATTGTCCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGGGCCGGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR TCA 90 bp | AGGGATATGCTGTCCCTGTGTGGTGGATCAGACTGCAGCCGGCCCTaGGGCAGGGCTGGAACAGGCAGATCCCACACTGCTCTTTTCATC | + |
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Preference number: 1 (lower is better) Translates to: RDMLSLCGGSDCSRP*GRAGTGRSHTALFI Trigger: GATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGGGCCGGCTGCAGTCTGATCCACCACACAGGGACAGCATATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 90 bp | GTCCCTGTGTGGTGGATCAGACTGCAGCCGGCCCTGAGGCAGGGCTaGAACAGGCAGATCCCACACTGCTCTTTTCATCCAAAGACGAGT | + |
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Preference number: 1 (lower is better) Translates to: VPVWWIRLQPALRQG*NRQIPHCSFHPKTS Trigger: ACTCGTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGGGCCGGCTGCAGTCTGATCCACCACACAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR TCA 90 bp | CGGGCCCTCTCATGGATGGGAACTGAGGAAGCAGCCAGTACCAGATaGGGTGTCCAAGCCTGTCCCCATGCTAACAACCCACATCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: RALSWMGTEEAASTR*GVQACPHANNPHQG Trigger: TCCCTGATGTGGGTTGTTAGCATGGGGACAGGCTTGGACACCTCATCTGGTACTGGCTGCTTCCTCAGTTCCCATCCATGAGAGGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR TCA 90 bp | CGCTGCCGGACACCGTGTTCTAGGCGTGCCCTCCCTGGCATCGGTTaGGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCAGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: RCRTPCSRRALPGIG*EIVPSFLFGSMSGS Trigger: ACTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGGCACGCCTAGAACACGGTGTCCGGCAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 90 bp | CGAAGTGTACCATGCATGATTTCCAGAACCTCTCAGGAGATGAGCTaGGAAGGACACAGCCAGCGAGAATGGGTGGGGATGGGGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: RSVPCMISRTSQEMS*EGHSQREWVGMGTK Trigger: CTTTGTCCCCATCCCCACCCATTCTCGCTGGCTGTGTCCTTCCCAGCTCATCTCCTGAGAGGTTCTGGAAATCATGCATGGTACACTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 90 bp | CTGGAACAGGCAGATCCCACACTGCTCTTTTCATCCAAAGACGAGTaGCAGAGTGGGGACAATTGCCAGCACGAGAGAAAGGTGGACAGT | + |
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Preference number: 1 (lower is better) Translates to: LEQADPTLLFSSKDE*QSGDNCQHERKVDS Trigger: ACTGTCCACCTTTCTCTCGTGCTGGCAATTGTCCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 90 bp | AAGACGAGTGCCAGAGTGGGGACAATTGCCAGCACGAGAGAAAGGTaGACAGTCCGAAGTGTACCATGCATGATTTCCAGAACCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: KTSARVGTIASTRER*TVRSVPCMISRTSQ Trigger: CTGAGAGGTTCTGGAAATCATGCATGGTACACTTCGGACTGTCCACCTTTCTCTCGTGCTGGCAATTGTCCCCACTCTGGCACTCGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 90 bp | ACAATTGCCAGCACGAGAGAAAGGTGGACAGTCCGAAGTGTACCATaGATGATTTCCAGAACCTCTCAGGAGATGAGCTGGGAAGGACAC | + |
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Preference number: 1 (lower is better) Translates to: TIASTRERWTVRSVP*MISRTSQEMSWEGH Trigger: GTGTCCTTCCCAGCTCATCTCCTGAGAGGTTCTGGAAATCATGCATGGTACACTTCGGACTGTCCACCTTTCTCTCGTGCTGGCAATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 90 bp | GAGGAAAGAGTCATGCAAACCAAACTGAATGTGGTGGTGACCGAGTaGAAGATGCAGGGGTTTCAGAAGACACAAGCAACTCTGCACAAA | + |
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Preference number: 1 (lower is better) Translates to: EERVMQTKLNVVVTE*KMQGFQKTQATLHK Trigger: TTTGTGCAGAGTTGCTTGTGTCTTCTGAAACCCCTGCATCTTGCACTCGGTCACCACCACATTCAGTTTGGTTTGCATGACTCTTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 90 bp | CTGATCAATGCCATTTTGAAATATTTCTGTCAGGTTCCACTGGCTTaGTACCTTGTATCCCATAGGACATTTAAAAGGCCCACTAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LINAILKYFCQVPLA*YLVSHRTFKRPTRA Trigger: AGCCCTAGTGGGCCTTTTAAATGTCCTATGGGATACAAGGTACCAAGCCAGTGGAACCTGACAGAAATATTTCAAAATGGCATTGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 90 bp | CCAGTGAGTGAAGTAACATCATCTCTCATTCTTTTAAATGATCTCTaGTCTCTGGTACTAAAGTACATAATTGCTGAGCCGAACTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: PVSEVTSSLILLNDL*SLVLKYIIAEPNCH Trigger: ATGGCAGTTCGGCTCAGCAATTATGTACTTTAGTACCAGAGACCAGAGATCATTTAAAAGAATGAGAGATGATGTTACTTCACTCACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 90 bp | AATGATTTTAAAAATACAGTTGTGTCCTGGAACCATACCAGTGTTTaGTCACTCATTGAGGAAAGAGTCATGCAAACCAAACTGAATGTG | + |
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Preference number: 1 (lower is better) Translates to: NDFKNTVVSWNHTSV*SLIEERVMQTKLNV Trigger: CACATTCAGTTTGGTTTGCATGACTCTTTCCTCAATGAGTGAGCAAACACTGGTATGGTTCCAGGACACAACTGTATTTTTAAAATCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGACCGAGTGCAAGATGCAGGGGTTTCAGAAGACACAAGCAACTCTGCAGCCCTGAGGCAGGGCTaGAACAGGCAGATCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: GGDRVQDAGVSEDTSNSAALRQG*NRQIPH Trigger: GTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGGGC...TGCAGAGTTGCTTGTGTCTTCTGAAACCCCTGCATCTTGCACTCGGTCACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCATGCAAACCAAACTGAATGTGGTGGTGACCGAGTGCAAGATGCAGGGGCACGGAGCAGGCCCTTaGCACAGGCACAACACAGGC | + |
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Preference number: 2 (lower is better) Translates to: RVMQTKLNVVVTECKMQGHGAGP*HRHNTG Trigger: GCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCGTG...CCCCTGCATCTTGCACTCGGTCACCACCACATTCAGTTTGGTTTGCATGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR TCA 90 bp | TCACGGAGCAGGCCCTTGACACAGGCACAACACAGGCGCTGCCGGACACCGTGTGTTTTGTCCAGTGAGTaGAGTAACATCATCTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SRSRPLTQAQHRRCRTPCVLSSE*SNIISH Trigger: ATGAGAGATGATGTTACTTCACTCACTGGACAAAAC...ACACGGTGTCCGGCAGCGCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCAGGGAGGCTGTCCCTGTGTGGTaGATCAGACTGCAGCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: WHRLRDCSFLFIWQYVREAVPVW*IRLQPA Trigger: GGCCGGCTGCAGTCTGATCCACCACACAGGGACAGC...CTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCGAACCTCTCAGGAGATaGGCTGGGAAGGACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: PPWHRLRDCSFLFIWQYVEPLRR*AGKDTA Trigger: GGCTGTGTCCTTCCCAGCTCATCTCCTGAGAGGTTC...GACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CAA 90 bp | GGACACCGTGTTCTAGGCGTGCCCTCCCTGGCATCGGTTGAGAGATaGTTCCTTCCTTTTTATTTGGCAGTATGTCAGGGAGTAATTGTC | + |
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Preference number: 2 (lower is better) Translates to: GHRVLGVPSLASVER*FLPFYLAVCQGVIV Trigger: GACAATTACTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGGCACGCCTAGAACACGGTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCAGGGAGGGGCCCTCTCATGGATaGGAACTGAGGAAGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: WHRLRDCSFLFIWQYVREGPSHG*ELRKQP Trigger: TGGCTGCTTCCTCAGTTCCCATCCATGAGAGGGCCC...CTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGACCGAGTGCAAGATGCAGGGGTTTCAGAAGACACAAGCAACTCTGCATCTCATTCTTTTAAATaGTCTCTGGTCTCTGGTACT | + |
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Preference number: 2 (lower is better) Translates to: GGDRVQDAGVSEDTSNSASHSFK*SLVSGT Trigger: AGTACCAGAGACCAGAGATCATTTAAAAGAATGAGA...TGCAGAGTTGCTTGTGTCTTCTGAAACCCCTGCATCTTGCACTCGGTCACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CCA 90 bp | TTGAAATATTTCTGTCAGGTTCCACTGGCTTGGTACCTTGTATCCCATAGGACAGAGAATGGGTGGGGATaGGGACAAAGCGAAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LKYFCQVPLAWYLVSHRTENGWG*GQSERC Trigger: ACACCTTTCGCTTTGTCCCCATCCCCACCCATTCTC...TGTCCTATGGGATACAAGGTACCAAGCCAGTGGAACCTGACAGAAATATTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTAGAAGGAGGAAGCTGTaGTGGAGAAATAGGGATATG | + |
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Preference number: 2 (lower is better) Translates to: PSLASVERLFLPFYLAVCRRRKL*WRNRDM Trigger: CATATCCCTATTTCTCCATCACAGCTTCCTCCTTCT...ACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCGAACAAATAAGCCCATaGGAAGGAGGAAGCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PPWHRLRDCSFLFIWQYVEQISP*EGGSCD Trigger: ATCACAGCTTCCTCCTTCTCATGGGCTTATTTGTTC...GACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGTGGGGAGAAATAGGGATATaGTGTCCCTGTGTGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PELLASMTLFKIASVPEWGEIGI*CPCVVD Trigger: ATCCACCACACAGGGACAGCATATCCCTATTTCTCC...CCACTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTTTTTATTTGGCAGTATGTCAGGGAGTAATTGTCTCAGATCAAAACTACACAGCCAGCGAGAATaGGTGGGGATGGGGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PSFLFGSMSGSNCLRSKLHSQRE*VGMGTK Trigger: CTTTGTCCCCATCCCCACCCATTCTCGCTGGCTGTG...TAGTTTTGATCTGAGACAATTACTCCCTGACATACTGCCAAATAAAAAGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CAA 90 bp | GTGCCCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTaGGCAGTATGTCAGGGAGTAATTGTCTCAGATCAAAACTACAAG | + |
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Preference number: 2 (lower is better) Translates to: VPSLASVERLFLPFY*AVCQGVIVSDQNYK Trigger: CTTGTAGTTTTGATCTGAGACAATTACTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTATCAAAACTACAAGTTaGTTTTGTCCAGTGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PSLASVERLFLPFYLAVCIKTTS*FCPVSE Trigger: TTCACTCACTGGACAAAACCAACTTGTAGTTTTGAT...ACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 72 bp | CGGAGCAGGCCCTTGACACAGGCACAACACAGGCGCTaGCGGACACCGTGTTCTAGGCGTGCCCTCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: RSRPLTQAQHRR*RTPCSRRALPG Trigger: GCCAGGGAGGGCACGCCTAGAACACGGTGTCCGGCAGCGCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR TCA 72 bp | CTGTCCCTGTGTGGTGGATCAGACTGCAGCCGGCCCTaGGGCAGGGCTGGAACAGGCAGATCCCACACTGCT | + |
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Preference number: 3 (lower is better) Translates to: LSLCGGSDCSRP*GRAGTGRSHTA Trigger: AGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGGGCCGGCTGCAGTCTGATCCACCACACAGGGACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR TCA 72 bp | TCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTTaGCACAGGCACAACACAGGCGCTGCCGGACACCGT | + |
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Preference number: 3 (lower is better) Translates to: SRWDAFTHGAGP*HRHNTGAAGHR Trigger: ACGGTGTCCGGCAGCGCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 72 bp | GCCCTGAGGCAGGGCTGGAACAGGCAGATCCCACACTaGTCTTTTCATCCAAAGACGAGTGCCAGAGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: ALRQGWNRQIPH*SFHPKTSARVG Trigger: CCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 72 bp | TGGTGGATCAGACTGCAGCCGGCCCTGAGGCAGGGCTaGAACAGGCAGATCCCACACTGCTCTTTTCATCCA | + |
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Preference number: 3 (lower is better) Translates to: WWIRLQPALRQG*NRQIPHCSFHP Trigger: TGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGGGCCGGCTGCAGTCTGATCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 72 bp | CAACTCTGCACAAAACACCCACGCTTCACGCTGGGATaGATTTACTCACGGAGCAGGCCCTTGACACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QLCTKHPRFTLG*IYSRSRPLTQA Trigger: TGCCTGTGTCAAGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAAGCGTGGGTGTTTTGTGCAGAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 72 bp | CCATGCATGATTTCCAGAACCTCTCAGGAGATGAGCTaGGAAGGACACAGCCAGCGAGAATGGGTGGGGATG | + |
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Preference number: 3 (lower is better) Translates to: PCMISRTSQEMS*EGHSQREWVGM Trigger: CATCCCCACCCATTCTCGCTGGCTGTGTCCTTCCCAGCTCATCTCCTGAGAGGTTCTGGAAATCATGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 72 bp | GCAGATCCCACACTGCTCTTTTCATCCAAAGACGAGTaGCAGAGTGGGGACAATTGCCAGCACGAGAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: ADPTLLFSSKDE*QSGDNCQHERK Trigger: CTTTCTCTCGTGCTGGCAATTGTCCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGCAGTGTGGGATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 72 bp | GCCAGAGTGGGGACAATTGCCAGCACGAGAGAAAGGTaGACAGTCCGAAGTGTACCATGCATGATTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: ARVGTIASTRER*TVRSVPCMISR Trigger: TCTGGAAATCATGCATGGTACACTTCGGACTGTCCACCTTTCTCTCGTGCTGGCAATTGTCCCCACTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 72 bp | AGCACGAGAGAAAGGTGGACAGTCCGAAGTGTACCATaGATGATTTCCAGAACCTCTCAGGAGATGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: STRERWTVRSVP*MISRTSQEMSW Trigger: CCAGCTCATCTCCTGAGAGGTTCTGGAAATCATGCATGGTACACTTCGGACTGTCCACCTTTCTCTCGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CAA 90 bp | GGTGGTGACCGAGTGCAAGATGCAGGGGTTTCAGAAGACACAAGCAACTCTGCAGCATCGGTTGAGAGATaGTTCCTTCCTTTTTATTTG | + |
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Preference number: 3 (lower is better) Translates to: GGDRVQDAGVSEDTSNSAASVER*FLPFYL Trigger: CAAATAAAAAGGAAGGAACAATCTCTCAACCGATGC...TGCAGAGTTGCTTGTGTCTTCTGAAACCCCTGCATCTTGCACTCGGTCACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR-3UTR CAA 90 bp | GCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCAGAGCTGAAGAAAAACTaGCTCTGGTGTTCCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: AKGVTGEFHVFLFPLSCAELKKN*LWCSLC Trigger: GCAGAGGGAACACCAGAGCAAGTTTTTCTTCAGCTC...TGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200062.2 |
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| 3UTR-3UTR CAA 90 bp | ATGATTTTAAAAATACAGTTGTGTCCTGGAACCATACCAGTGTTTGCTCACTCAGAGCGGCTTGTAGGCTaGGCCAGAGTTGTTAGCATC | + |
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Preference number: 3 (lower is better) Translates to: MILKIQLCPGTIPVFAHSERLVG*ARVVSI Trigger: GATGCTAACAACTCTGGCCAAGCCTACAAGCCGCTC...TGAGTGAGCAAACACTGGTATGGTTCCAGGACACAACTGTATTTTTAAAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CCA 72 bp | GCCATTTTGAAATATTTCTGTCAGGTTCCACTGGCTTaGTACCTTGTATCCCATAGGACATTTAAAAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: AILKYFCQVPLA*YLVSHRTFKRP Trigger: GGGCCTTTTAAATGTCCTATGGGATACAAGGTACCAAGCCAGTGGAACCTGACAGAAATATTTCAAAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR GCA 72 bp | AAAAATACAGTTGTGTCCTGGAACCATACCAGTGTTTaGTCACTCATTGAGGAAAGAGTCATGCAAACCAAA | + |
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Preference number: 3 (lower is better) Translates to: KNTVVSWNHTSV*SLIEERVMQTK Trigger: TTTGGTTTGCATGACTCTTTCCTCAATGAGTGAGCAAACACTGGTATGGTTCCAGGACACAACTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CAA 72 bp | TTCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTaGACACAGGCACAACACAGGCGCTGCCGGACACCG | + |
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Preference number: 4 (lower is better) Translates to: FTLGCIYSRSRP*TQAQHRRCRTP Trigger: CGGTGTCCGGCAGCGCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | GCACAAAACACCCACGCTTCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTTGGTGTTGCCCAGGCTaGCCACCATGGCCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: AQNTHASRWDAFTHGAGPWCCPG*PPWPPS Trigger: TGAAGGAGGCCATGGTGGCCAGCCTGGGCAACACCA...AGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAAGCGTGGGTGTTTTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | GCTGGGATGCATTTACTCACGGAGCAGGCCCTTGACACAGGCACAACACAGGCGCTGCTGAGCAGTCCATaGAGATCACCAAGTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AGMHLLTEQALDTGTTQALLSSP*RSPSVG Trigger: ACCCACACTTGGTGATCTGCATGGACTGCTCAGCAG...CGCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCGTGAGTAAATGCATCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | TCACGGAGCAGGCCCTTGACACAGGCACAACACAGGCGCTGCCGGACACCGTGTTTCACTAGTCTCCTTTaGGTTGCTTTCAGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSRPLTQAQHRRCRTPCFTSLL*VAFRLS Trigger: TGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAA...ACACGGTGTCCGGCAGCGCCTGTGTTGTGCCTGTGTCAAGGGCCTGCTCCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | TGGGTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGGTGTTGCCCAGGCTaGCCACCATGGCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVGMGTKRKVLRVNSMYFWCCPG*PPWPPS Trigger: TGAAGGAGGCCATGGTGGCCAGCCTGGGCAACACCA...GAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CCA 90 bp | GCTCTTTTCATCCAAAGACGAGTGCCAGAGTGGGGACAATTGCCAGCACGAGAGAATTGTTGTCTCCTGTaGGGCCAGCTCCCCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFIQRRVPEWGQLPARENCCLL*GQLPIG Trigger: ACCAATGGGGAGCTGGCCCCACAGGAGACAACAATT...CTCTCGTGCTGGCAATTGTCCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | TGGGTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCCAATCAGGAAGCCCTTaGTGTTGCCCAGGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVGMGTKRKVLRVNSMYFQSGSP*CCPGWP Trigger: TGGCCAGCCTGGGCAACACCAAGGGCTTCCTGATTG...GAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| 3UTR CAA 72 bp | GCCGAACTGCCATGTGGAGAGGAGCGGCTTGTAGGCTaGGCCAGAGTTGTTAGCATCTATGACACTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AELPCGEERLVG*ARVVSIYDTVQ Trigger: TTGAACAGTGTCATAGATGCTAACAACTCTGGCCAAGCCTACAAGCCGCTCCTCTCCACATGGCAGTTCGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | GCACAAAACACCCACGCTTCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTGACTCCATTTTCTGTTaGTGCTGGCACTGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: AQNTHASRWDAFTHGAGPDSIFC*CWHCGF Trigger: AAATCCACAGTGCCAGCAGCAACAGAAAATGGAGTC...AGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAAGCGTGGGTGTTTTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | TGGCCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGCACACTGGGTGCCTTTaGCAGAGCCAGGGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WPELLASMTLFKIASVPEHTGCL*QSQGHP Trigger: TGGGTGGCCCTGGCTCTGGCAAAGGCACCCAGTGTG...CTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | ACACCCACGCTTCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTTGACACATGTCACGGATCAGTTTaGTTCTTTCTGACTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTLHAGMHLLTEQALDTCHGSV*FFLTLR Trigger: CCTCAGAGTCAGAAAGAAGCAAACTGATCCGTGACA...TGTGTCAAGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAAGCGTGGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTCTGTAACCTCTCCTTaGGCCTCTGGTTGGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGDGDKAKGVTGEFHVFLSVTSP*ASGWHK Trigger: CTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGA...CAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR TCA 90 bp | TGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCAGGGAGTCCTCTCGTAGTAGGTaGCGACGGGGATGGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WHRLRDCSFLFIWQYVRESSRSR*RRGWTL Trigger: GAGCGTCCATCCCCGTCGTCACCTACTACGAGAGGA...CTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | GGTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGGATGTCATGGAACACTaGGTCTTCATCTCGGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGDGDKAKGVTGEFHVFLDVMEH*VFISVG Trigger: GCCGACCGAGATGAAGACGCAGTGTTCCATGACATC...CAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | CACTTAGTTGTGCATTTTCTCCTTCAGAAAACAGAGTCAATAGCTGTGCAGAGCCACACTGGGTGCCTTTaGCAGAGCCAGGGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLVVHFLLQKTESIAVQSHTGCL*QSQGHP Trigger: TGGGTGGCCCTGGCTCTGGCAAAGGCACCCAGTGTG...GCTCTGCACAGCTATTGACTCTGTTTTCTGAAGGAGAAAATGCACAACTAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200062.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCAGGGCTGGAACAGGCAGATCCCACACTGCTCTTTTCATCCAAAGACCAGCATCAAACATCATaGAAGGGTCAAGGTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEAGLEQADPTLLFSSKDQHQTS*KGQGHL Trigger: CAAGTGACCTTGACCCTTCCATGATGTTTGATGCTG...GTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR TCA 90 bp | GCTCTTTTCATCCAAAGACGAGTGCCAGAGTGGGGACAATTGCCAGCACGAGAGTCTTCTTTTCCTGGCTaGCAAATGTGTCCCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALFIQRRVPEWGQLPARESSFPG*QMCPTS Trigger: TGAAGTGGGACACATTTGTCAGCCAGGAAAAGAAGA...CTCTCGTGCTGGCAATTGTCCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR TCA 90 bp | CCTGAGGCAGGGCTGGAACAGGCAGATCCCACACTGCTCTTTTCATCCAAAGACCCAAATACATTTAGCTaGTCATCGTCCTGGTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: PEAGLEQADPTLLFSSKDPNTFS*SSSWLS Trigger: CGATAACCAGGACGATGATCAGCTAAATGTATTTGG...GTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCCACCAGGTCAGGGGTaGAGATCTGGTCCTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLASVERLFLPFYLAVCPPGQG*RSGPQK Trigger: CTTTTGAGGACCAGATCTGCACCCCTGACCTGGTGG...ACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | GCTCTTTTCATCCAAAGACGAGTGCCAGAGTGGGGACAATTGCCAGCACGAGAGTTTCCAAGTACTCTATaGGGTCTTCTGGCTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALFIQRRVPEWGQLPAREFPSTL*GLLAWN Trigger: GTTCCAAGCCAGAAGACCCCATAGAGTACTTGGAAA...CTCTCGTGCTGGCAATTGTCCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR TCA 90 bp | GCTCTTTTCATCCAAAGACGAGTGCCAGAGTGGGGACAATTGCCAGCACGAGAGAGCCTCCTAGCTCCTTaGCTTTCTGTAAACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALFIQRRVPEWGQLPARESLLAP*LSVNKF Trigger: AAACTTGTTTACAGAAAGTCAAGGAGCTAGGAGGCT...CTCTCGTGCTGGCAATTGTCCCCACTCTGGCACTCGTCTTTGGATGAAAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR TCA 90 bp | TTCCACTTAGTTGTGCATTTTCTCCTTCAGAAAACAGAGTCAATAGCTGTGCAGTCCTCTCGTAGTAGGTaGCGACGGGGATGGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FHLVVHFLLQKTESIAVQSSRSR*RRGWTL Trigger: GAGCGTCCATCCCCGTCGTCACCTACTACGAGAGGA...CTGCACAGCTATTGACTCTGTTTTCTGAAGGAGAAAATGCACAACTAAGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200062.2 |
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| CDS-3UTR GCA 90 bp | CTGAGGCAGGGCTGGAACAGGCAGATCCCACACTGCTCTTTTCATCCAAAGACGGAATCCATACCGCTCTaGAATTTTCAAACTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRQGWNRQIPHCSFHPKTESIPL*NFQTLS Trigger: ACTCAGAGTTTGAAAATTGCAGAGCGGTATGGATTC...CGTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | TGGCCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGGGAAAACTGGTGGATTaGAGGGAGCCGGTCATACCG | + |
|
Preference number: 4 (lower is better) Translates to: WPELLASMTLFKIASVPEGKLVD*REPVIP Trigger: CGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCC...CTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCTCTCTATGGAAAACTaGTGGATTGGAGGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLASVERLFLPFYLAVCLSMEN*WIGGSR Trigger: CCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAG...ACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | CCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGTGGTCTGAGGTCAGTTCCTaGCGCAGGAGCTCACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PELLASMTLFKIASVPEWSEVSS*RRSSPV Trigger: TACTGGTGAGCTCCTGCGCCAGGAACTGACCTCAGA...CCACTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | CCTGAGGCAGGGCTGGAACAGGCAGATCCCACACTGCTCTTTTCATCCAAAGACAAGAAAAACTTGCTCTaGTGTTCCCTCTGCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PEAGLEQADPTLLFSSKDKKNLL*CSLCIY Trigger: GTAAATGCAGAGGGAACACCAGAGCAAGTTTTTCTT...GTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | TTGAAATATTTCTGTCAGGTTCCACTGGCTTGGTACCTTGTATCCCATAGGACACTCTCCTTGAGCCTCTaGTTGGCACAAGCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKYFCQVPLAWYLVSHRTLSLSL*LAQARN Trigger: GTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAG...TGTCCTATGGGATACAAGGTACCAAGCCAGTGGAACCTGACAGAAATATTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | GCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATCTGAGGTCAGTTCCTaGCGCAGGAGCTCACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AKGVTGEFHVFLFPLSCASEVSS*RRSSPV Trigger: TACTGGTGAGCTCCTGCGCCAGGAACTGACCTCAGA...TGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CCA 90 bp | CTTAGTTGTGCATTTTCTCCTTCAGAAAACAGAGTCAATAGCTGTGCAGAGCTGGCAGATCACCAAGTGTaGGTCTCCGATCCTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSCAFSPSENRVNSCAELADHQV*VSDPSS Trigger: GGACGAAGGATCGGAGACCCACACTTGGTGATCTGC...CAGCTCTGCACAGCTATTGACTCTGTTTTCTGAAGGAGAAAATGCACAACTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200062.2 |
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| CDS-3UTR TCA 90 bp | TGGGTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCCCAAATACATTTAGCTaGTCATCGTCCTGGTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: WVGMGTKRKVLRVNSMYFPNTFS*SSSWLS Trigger: CGATAACCAGGACGATGATCAGCTAAATGTATTTGG...GAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR TCA 90 bp | TGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCAGGGAGTCCTCAAATCCTCCATaGAGCCTCCCTCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WHRLRDCSFLFIWQYVRESSNPP*SLPLCL Trigger: AAGACACAGAGGGAGGCTTCATGGAGGATTTGAGGA...CTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR TCA 90 bp | GGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTTCCTCAAATCCTCCATaGAGCCTCCCTCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDKAKGVTGEFHVFLFPLSSNPP*SLPLCL Trigger: AAGACACAGAGGGAGGCTTCATGGAGGATTTGAGGA...AAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR TCA 90 bp | CTTAGTTGTGCATTTTCTCCTTCAGAAAACAGAGTCAATAGCTGTGCAGAGCTGCTGCTCTGGCTTCTCTaGAGAAGGCGGTTAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSCAFSPSENRVNSCAELLLWLL*RRRLVM Trigger: CATGACTAACCGCCTTCTTCAGAGAAGCCAGAGCAG...CAGCTCTGCACAGCTATTGACTCTGTTTTCTGAAGGAGAAAATGCACAACTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200062.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGTGGCCCACTGAGATGTACTaGAATCCATACCGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PELLASMTLFKIASVPEWPTEMY*NPYRSA Trigger: TGCAGAGCGGTATGGATTCCAGTACATCTCAGTGGG...CCACTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | GTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTCTGGGCAACATCCCTTaGGAATCCATCAATCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGMGTKRKVLRVNSMYFCLGNIP*ESINHN Trigger: ATTGTGATTGATGGATTCCCAAGGGATGTTGCCCAG...ACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | TTGAAATATTTCTGTCAGGTTCCACTGGCTTGGTACCTTGTATCCCATAGGACATCAGGGGTGCAGATCTaGTCCTCAAAAGACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKYFCQVPLAWYLVSHRTSGVQI*SSKDRA Trigger: GGCTCTGTCTTTTGAGGACCAGATCTGCACCCCTGA...TGTCCTATGGGATACAAGGTACCAAGCCAGTGGAACCTGACAGAAATATTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | GCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATCTATGGAAAACTGGTaGATTGGAGGGAGCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKGVTGEFHVFLFPLSCASMENW*IGGSRS Trigger: TGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGA...TGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | CCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGTGGCCGTGTCACTCTCTATaGAAAACTGGTGGATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PELLASMTLFKIASVPEWPCHSL*KTGGLE Trigger: CTCCAATCCACCAGTTTTCCATAGAGAGTGACACGG...CCACTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | AAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTCAATCAGGAAGCCCTTaGTGTTGCCCAGGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGVTGEFHVFLFPLSCAFQSGSP*CCPGWP Trigger: TGGCCAGCCTGGGCAACACCAAGGGCTTCCTGATTG...AAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCTTGAATTTTCAGGCATaGCATTTCGGAGGAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PPWHRLRDCSFLFIWQYVLNFQA*HFGGRI Trigger: GATCCTTCCTCCGAAATGTCATGCCTGAAAATTCAA...GACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTTCCATTTTCTGTTGCTaGTGGCACTGTGGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLASVERLFLPFYLAVCSIFCC*WHCGFS Trigger: AGAAAATCCACAGTGCCAGCAGCAACAGAAAATGGA...ACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAGGGAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | CCTTCCTTTTTATTTGGCAGTATGTCAGGGAGTAATTGTCTCAGATCAAAACTAGCAGATCACCAAGTGTaGGTCTCCGATCCTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLFGSMSGSNCLRSKLADHQV*VSDPSS Trigger: GGACGAAGGATCGGAGACCCACACTTGGTGATCTGC...TAGTTTTGATCTGAGACAATTACTCCCTGACATACTGCCAAATAAAAAGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS-3UTR TCA 90 bp | TGGCCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGGCAATTTTCAAACTCTaGGTACCCTTTCCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPELLASMTLFKIASVPEAIFKL*VPFPLP Trigger: AGGAAGTGGAAAGGGTACTCAGAGTTTGAAAATTGC...CTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS-3UTR TCA 90 bp | AAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTAGTCATGGTGTCTGCTaGGCAGTCCATGCAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGVTGEFHVFLFPLSCAFSHGVC*AVHADH Trigger: GTGATCTGCATGGACTGCTCAGCAGACACCATGACT...AAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTTAGTCATGGTGTCTGCTaGGCAGTCCATGCAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVNSMYFCFHLVVHFSHGVC*AVHADH Trigger: GTGATCTGCATGGACTGCTCAGCAGACACCATGACT...AAAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTAAAAATACAGTTGTGTCCTGGAACCATACCAGTGTTTGCTCACTCACTGCTCTGGCTTCTCTaGAGAAGGCGGTTAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: MILKIQLCPGTIPVFAHSLLWLL*RRRLVM Trigger: CATGACTAACCGCCTTCTTCAGAGAAGCCAGAGCAG...TGAGTGAGCAAACACTGGTATGGTTCCAGGACACAACTGTATTTTTAAAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS-3UTR GCA 90 bp | AAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTTCTGCTGAGCAGTCCATaGAGATCACCAAGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVNSMYFCFHLVVHFLLSSP*RSPSVG Trigger: ACCCACACTTGGTGATCTGCATGGACTGCTCAGCAG...AAAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGTTGTTAGCATCTATGACACTGTTCAAAATAGCTAGTGTCCCAGAGTGGATTTTCTGTTGCTGCTaGCACTGTGGATTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PELLASMTLFKIASVPEWIFCCC*HCGFSS Trigger: GGAAGAAAATCCACAGTGCCAGCAGCAACAGAAAAT...CCACTCTGGGACACTAGCTATTTTGAACAGTGTCATAGATGCTAACAACTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR TCA 90 bp | ATGATTTTAAAAATACAGTTGTGTCCTGGAACCATACCAGTGTTTGCTCACTCAGGGCGGCATTCTGCTTaGAGTTCACTAGTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MILKIQLCPGTIPVFAHSGRHSA*SSLVSF Trigger: AAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCC...TGAGTGAGCAAACACTGGTATGGTTCCAGGACACAACTGTATTTTTAAAATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | AAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTGCCACGCTGATGTCATaGAACACTGCGTCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KGVTGEFHVFLFPLSCAFATLMS*NTASSS Trigger: AGATGAAGACGCAGTGTTCCATGACATCAGCGTGGC...AAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CCA 90 bp | ATGATTTTAAAAATACAGTTGTGTCCTGGAACCATACCAGTGTTTGCTCACTCACGGAGCCTCTTTGTTTaGAAACAGCTTGCTGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: MILKIQLCPGTIPVFAHSRSLFV*KQLAVD Trigger: GTCGACAGCAAGCTGTTTCCAAACAAAGAGGCTCCG...TGAGTGAGCAAACACTGGTATGGTTCCAGGACACAACTGTATTTTTAAAATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| 3UTR CAA 72 bp | CTGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTaGGCAGTATGTCAGGGAGTAATTGTCTCAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LASVERLFLPFY*AVCQGVIVSDQ Trigger: TTGATCTGAGACAATTACTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR GCA 90 bp | AAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTTGTCACGGATCAGTTTaGTTCTTTCTGACTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGVTGEFHVFLFPLSCAFCHGSV*FFLTLR Trigger: CCTCAGAGTCAGAAAGAAGCAAACTGATCCGTGACA...AAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CCA 90 bp | AAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTTACCCTTTCCACTTCCTaGACCACCTATGACAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVLRVNSMYFCFHLVVHFTLSTS*TTYDKN Trigger: ATTCTTGTCATAGGTGGTCCAGGAAGTGGAAAGGGT...AAAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | CATCTGGCCGCCCCTGCTGCTCCGCACGCTTCTGTAACCTCTCCTTaGGCCTCTGGTTGGCACAAGCCAGGAACACCACCAGGTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLAAPAAPHASVTSP*ASGWHKPGTPPGQG Trigger: CCCCTGACCTGGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCGGCCAGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 90 bp | CGCCCCTGCTGCTCCGCACGCTTCTGTAACCTCTCCTTGAGCCTCTaGTTGGCACAAGCCAGGAACACCACCAGGTCAGGGGTGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RPCCSARFCNLSLSL*LAQARNTTRSGVQI Trigger: GATCTGCACCCCTGACCTGGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 90 bp | AGCCGTCAATCAGGAAGCCCTTGGTGTTGCCCAGGCTGGCCACCATaGCCTCCTTCAGCAGCTCCAGAACGACACCCGAGGGCACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRQSGSPWCCPGWPP*PPSAAPERHPRAPD Trigger: ATCTGGTGCCCTCGGGTGTCGTTCTGGAGCTGCTGAAGGAGGCCATGGTGGCCAGCCTGGGCAACACCAAGGGCTTCCTGATTGACGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS TCA 90 bp | CCTCTGCATTTACCTTCCGTAGCTGTGTTTTCCTCTCGTAGTAGGTaGCGACGGGGATGGACGCTCGGTGGTAGGCCTCCAGGCGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLHLPSVAVFSSRSR*RRGWTLGGRPPGAW Trigger: CCAAGCGCCTGGAGGCCTACCACCGAGCGTCCATCCCCGTCGTCACCTACTACGAGAGGAAAACACAGCTACGGAAGGTAAATGCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | GCACAAAACACCCACGCTTCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTTCAATCAGGAAGCCCTaGGTGTTGCCCAGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQNTHASRWDAFTHGAGPSIRKP*VLPRLA Trigger: GGCCAGCCTGGGCAACACCAAGGGCTTCCTGATTGA...AGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAAGCGTGGGTGTTTTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS GCA 90 bp | AGTCTCCTTTGGGTTGCTTTCAGGTTGTCATCTGGCCGCCCCTGCTaGTCCGCACGCTTCTGTAACCTCTCCTTGAGCCTCTGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLWVAFRLSSGRPC*SARFCNLSLSLWLA Trigger: TGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCAAAGGAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | TCTGGCTTGGAACACATCAAGCCATTGAGCAGGCTCTCGAAAAGCTaGGGAATGTCCCTCCGGGCCAGGTACTCCTTGGCGTCGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGLEHIKPLSRLSKS*GMSLRARYSLASLV Trigger: CACCAACGACGCCAAGGAGTACCTGGCCCGGAGGGACATTCCTCAGCTTTTCGAGAGCCTGCTCAATGGCTTGATGTGTTCCAAGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS GCA 90 bp | ACTAGTCTCCTTTGGGTTGCTTTCAGGTTGTCATCTGGCCGCCCCTaGTGCTCCGCACGCTTCTGTAACCTCTCCTTGAGCCTCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSLLWVAFRLSSGRP*CSARFCNLSLSLWL Trigger: CAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCAAAGGAGACTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 90 bp | CTTCTATCAGCTCCGCCGTCTCCGACAGGTCCGTGTCACTCTCTATaGAAAACTGGTGGATTGGAGGGAGCCGGTCATACCGCCGATATG | + |
|
Preference number: 5 (lower is better) Translates to: LLSAPPSPTGPCHSL*KTGGLEGAGHTADM Trigger: CATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGTCGGAGACGGCGGAGCTGATAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | GCTGCTCTGGCTTCTCTGAAGAAGGCGGTTAGTCATGGTGTCTGCTaGGCAGTCCATGCAGATCACCAAGTGTGGGTCTCCGATCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AALASLKKAVSHGVC*AVHADHQVWVSDPS Trigger: CGAAGGATCGGAGACCCACACTTGGTGATCTGCATGGACTGCTCAGCAGACACCATGACTAACCGCCTTCTTCAGAGAAGCCAGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS CCA 90 bp | AGCTCCGCCGTCTCCGACAGGTCCGTGTCACTCTCTATGGAAAACTaGTGGATTGGAGGGAGCCGGTCATACCGCCGATATGGAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSAVSDRSVSLSMEN*WIGGSRSYRRYGKF Trigger: AAACTTTCCATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGTCGGAGACGGCGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 90 bp | TTCACTAGTGGGGCGGCATTCTGCTTGAAGTTCACTAGTCTCCTTTaGGTTGCTTTCAGGTTGTCATCTGGCCGCCCCTGCTGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTSGAAFCLKFTSLL*VAFRLSSGRPCCSA Trigger: TGCGGAGCAGCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | ATGCATGATTTCCAGAACCTCTCAGGAGATGAGCTGGGAAGGACACAGCCAGCGGTGTCCCACTTCACCTaGTCACAGCCTCCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MHDFQNLSGDELGRTQPAVSHFT*SQPPSS Trigger: GGAGCTAGGAGGCTGTGACAAGGTGAAGTGGGACAC...CGCTGGCTGTGTCCTTCCCAGCTCATCTCCTGAGAGGTTCTGGAAATCATGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | CCAAGTACTCTATGGGGTCTTCTGGCTTGGAACACATCAAGCCATTaGGCAGGCTCTCGAAAAGCTGAGGAATGTCCCTCCGGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSTLWGLLAWNTSSH*AGSRKAEECPSGPG Trigger: ACCTGGCCCGGAGGGACATTCCTCAGCTTTTCGAGAGCCTGCTCAATGGCTTGATGTGTTCCAAGCCAGAAGACCCCATAGAGTACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | GCAGCTCCAGAACGACACCCGAGGGCACCAGATCTCCACGCTCCATaGTGTCACGGATCAGTTTGCTTCTTTCTGACTCTGAGGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAPERHPRAPDLHAP*CHGSVCFFLTLRSV Trigger: AACTGACCTCAGAGTCAGAAAGAAGCAAACTGATCCGTGACATCATGGAGCGTGGAGATCTGGTGCCCTCGGGTGTCGTTCTGGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS CCA 90 bp | TCCGCCGTCTCCGACAGGTCCGTGTCACTCTCTATGGAAAACTGGTaGATTGGAGGGAGCCGGTCATACCGCCGATATGGAAAGTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAVSDRSVSLSMENW*IGGSRSYRRYGKFE Trigger: TTCAAACTTTCCATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGTCGGAGACGGCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | ACACCCACGCTTCACGCTGGGATGCATTTACTCACGGAGCAGGCCCTTGACACAGAGCTGAAGAAAAACTaGCTCTGGTGTTCCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPTLHAGMHLLTEQALDTELKKN*LWCSLC Trigger: GCAGAGGGAACACCAGAGCAAGTTTTTCTTCAGCTC...TGTGTCAAGGGCCTGCTCCGTGAGTAAATGCATCCCAGCGTGAAGCGTGGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | TCGGAGCCTCTTTGTTTGGAAACAGCTTGCTGTCGACGGCCACGCTaGTGTCATGGAACACTGCGTCTTCATCTCGGTCGGCATCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SEPLCLETACCRRPR*CHGTLRLHLGRHQK Trigger: CTTTTGATGCCGACCGAGATGAAGACGCAGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAGCTGTTTCCAAACAAAGAGGCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS GCA 90 bp | TGGAAACAGCTTGCTGTCGACGGCCACGCTGATGTCATGGAACACTaGGTCTTCATCTCGGTCGGCATCAAAAGTCACGATGAGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WKQLAVDGHADVMEH*VFISVGIKSHDESL Trigger: AAGGGACTCATCGTGACTTTTGATGCCGACCGAGATGAAGACGCAGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAGCTGTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | AGAGTCATGCAAACCAAACTGAATGTGGTGGTGACCGAGTGCAAGATGCAGGGGTGGAAAACTGGTGGATaGGAGGGAGCCGGTCATACC | + |
|
Preference number: 5 (lower is better) Translates to: RVMQTKLNVVVTECKMQGWKTGG*EGAGHT Trigger: GGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCA...CCCCTGCATCTTGCACTCGGTCACCACCACATTCAGTTTGGTTTGCATGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | CCTGAGGCAGGGCTGGAACAGGCAGATCCCACACTGCTCTTTTCATCCAAAGACAGACTCCATTTTCTGTaGCTGCTGGCACTGTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: PEAGLEQADPTLLFSSKDRLHFL*LLALWI Trigger: AATCCACAGTGCCAGCAGCAACAGAAAATGGAGTCT...GTCTTTGGATGAAAAGAGCAGTGTGGGATCTGCCTGTTCCAGCCCTGCCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | GTGATTGTCCTCCATTTAGGGGCGGTAACGTCTTCTTTTCCTGGCTaGCAAATGTGTCCCACTTCACCTTGTCACAGCCTCCTAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VIVLHLGAVTSSFPG*QMCPTSPCHSLLAP Trigger: AGGAGCTAGGAGGCTGTGACAAGGTGAAGTGGGACACATTTGTCAGCCAGGAAAAGAAGACGTTACCGCCCCTAAATGGAGGACAATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | CATGGAACACTGCGTCTTCATCTCGGTCGGCATCAAAAGTCACGATaGGTCCCTTCTCTTGGAAGTACTTCACTAGTGGGGCGGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: HGTLRLHLGRHQKSR*VPSLGSTSLVGRHS Trigger: AGAATGCCGCCCCACTAGTGAAGTACTTCCAAGAGAAGGGACTCATCGTGACTTTTGATGCCGACCGAGATGAAGACGCAGTGTTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 90 bp | TCTTTGTTTGGAAACAGCTTGCTGTCGACGGCCACGCTGATGTCATaGAACACTGCGTCTTCATCTCGGTCGGCATCAAAAGTCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLFGNSLLSTATLMS*NTASSSRSASKVTM Trigger: CATCGTGACTTTTGATGCCGACCGAGATGAAGACGCAGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAGCTGTTTCCAAACAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | TGGCATCGGTTGAGAGATTGTTCCTTCCTTTTTATTTGGCAGTATGTCAGGGAGTGGGTTGCTTTCAGGTaGTCATCTGGCCGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WHRLRDCSFLFIWQYVREWVAFR*SSGRPC Trigger: GCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCA...CTCCCTGACATACTGCCAAATAAAAAGGAAGGAACAATCTCTCAACCGATGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | GGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTTCAATCAGGAAGCCCTaGGTGTTGCCCAGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDKAKGVTGEFHVFLFPLSIRKP*VLPRLA Trigger: GGCCAGCCTGGGCAACACCAAGGGCTTCCTGATTGA...AAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CAA 90 bp | GGTGGTGACCGAGTGCAAGATGCAGGGGTTTCAGAAGACACAAGCAACTCTGCACAGCCTCCTAGCTCCTaGACTTTCTGTAAACAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGDRVQDAGVSEDTSNSAQPPSS*TFCKQV Trigger: AACTTGTTTACAGAAAGTCAAGGAGCTAGGAGGCTG...TGCAGAGTTGCTTGTGTCTTCTGAAACCCCTGCATCTTGCACTCGGTCACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | TGGGTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCCCTGGGCAACATCCCTaGGGAATCCATCAATCACAA | + |
|
Preference number: 5 (lower is better) Translates to: WVGMGTKRKVLRVNSMYFPGQHP*GIHQSQ Trigger: TTGTGATTGATGGATTCCCAAGGGATGTTGCCCAGG...GAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | GTCCCTTCTCTTGGAAGTACTTCACTAGTGGGGCGGCATTCTGCTTaGAGTTCACTAGTCTCCTTTGGGTTGCTTTCAGGTTGTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSLGSTSLVGRHSA*SSLVSFGLLSGCHL Trigger: CAGATGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAGAGAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 90 bp | GGTGCAGATCTGGTCCTCAAAAGACAGAGCCTGGGCAACATCCCTTaGGAATCCATCAATCACAATGCCTTCTTCATCGGGTATTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GADLVLKRQSLGNIP*ESINHNAFFIGYLH Trigger: ATGCAAATACCCGATGAAGAAGGCATTGTGATTGATGGATTCCCAAGGGATGTTGCCCAGGCTCTGTCTTTTGAGGACCAGATCTGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 90 bp | TCTTCATCTCGGTCGGCATCAAAAGTCACGATGAGTCCCTTCTCTTaGAAGTACTTCACTAGTGGGGCGGCATTCTGCTTGAAGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SSSRSASKVTMSPFS*KYFTSGAAFCLKFT Trigger: AGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAGAGAAGGGACTCATCGTGACTTTTGATGCCGACCGAGATGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS GCA 90 bp | ATGAGTCCCTTCTCTTGGAAGTACTTCACTAGTGGGGCGGCATTCTaGTTGAAGTTCACTAGTCTCCTTTGGGTTGCTTTCAGGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSPFSWKYFTSGAAF*LKFTSLLWVAFRLS Trigger: TGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAGAGAAGGGACTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | TGGGTGGGGATGGGGACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCATGTCACGGATCAGTTaGCTTCTTTCTGACTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WVGMGTKRKVLRVNSMYFMSRIS*LLSDSE Trigger: CTCAGAGTCAGAAAGAAGCAAACTGATCCGTGACAT...GAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTCCCCATCCCCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTCCAAACTCTTCCCCTaGCTTCACTTCCCGGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DKAKGVTGEFHVFLFPLSSKLFP*LHFPGV Trigger: TACCCCCGGGAAGTGAAGCAAGGGGAAGAGTTTGGA...ACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CAA 90 bp | GCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATCGGAGCCTCTTTGTTaGGAAACAGCTTGCTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: AKGVTGEFHVFLFPLSCASEPLC*ETACCR Trigger: TCGACAGCAAGCTGTTTCCAAACAAAGAGGCTCCGA...TGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | ACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTTCCAAACTCTTCCCCTaGCTTCACTTCCCGGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TKRKVLRVNSMYFCFHLVSKLFP*LHFPGV Trigger: TACCCCCGGGAAGTGAAGCAAGGGGAAGAGTTTGGA...AACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CAA 90 bp | GACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTTCTGTAACCTCTCCTaGAGCCTCTGGTTGGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: DKAKGVTGEFHVFLFPLSFCNLS*SLWLAQ Trigger: TTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAA...ACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 90 bp | ACTGAGATGTACTGGAATCCATACCGCTCTGCAATTTTCAAACTCTaGGTACCCTTTCCACTTCCTGGACCACCTATGACAAGAATGATT | + |
|
Preference number: 5 (lower is better) Translates to: TEMYWNPYRSAIFKL*VPFPLPGPPMTRMI Trigger: AATCATTCTTGTCATAGGTGGTCCAGGAAGTGGAAAGGGTACTCAGAGTTTGAAAATTGCAGAGCGGTATGGATTCCAGTACATCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | CCTTCCTTTTTATTTGGCAGTATGTCAGGGAGTAATTGTCTCAGATCAAAACTAGGGGCGGCATTCTGCTaGAAGTTCACTAGTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSFLFGSMSGSNCLRSKLGAAFC*KFTSLL Trigger: AAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCC...TAGTTTTGATCTGAGACAATTACTCCCTGACATACTGCCAAATAAAAAGGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS-3UTR CAA 90 bp | AAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTGTGCATTTTATGACAAGAATGATTTaGGGCCGAGGTCTAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLRVNSMYFCFHLVVHFMTRMI*GRGLVG Trigger: CCCGACTAGACCTCGGCCCAAAATCATTCTTGTCAT...AAAATGCACAACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTATGTCACGGATCAGTTaGCTTCTTTCTGACTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TKRKVLRVNSMYFCFHLVMSRIS*LLSDSE Trigger: CTCAGAGTCAGAAAGAAGCAAACTGATCCGTGACAT...AACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGCGAAAGGTGTTACGGGTGAATTCCATGTATTTCTGTTTCCACTTAGTTCCATTGGTGATTATCTaGGCGATCAGACTCCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TKRKVLRVNSMYFCFHLVPLVII*AIRLHF Trigger: AAAATGGAGTCTGATCGCCAAGATAATCACCAATGG...AACTAAGTGGAAACAGAAATACATGGAATTCACCCGTAACACCTTTCGCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 90 bp | TCATCTGGCCGCCCCTGCTGCTCCGCACGCTTCTGTAACCTCTCCTaGAGCCTCTGGTTGGCACAAGCCAGGAACACCACCAGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGRPCCSARFCNLS*SLWLAQARNTTRSG Trigger: CCCTGACCTGGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCGGCCAGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 72 bp | CGCCCCTGCTGCTCCGCACGCTTCTGTAACCTCTCCTaGAGCCTCTGGTTGGCACAAGCCAGGAACACCACC | + |
|
Preference number: 6 (lower is better) Translates to: RPCCSARFCNLS*SLWLAQARNTT Trigger: GGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 90 bp | CCCTGCTGCTCCGCACGCTTCTGTAACCTCTCCTTGAGCCTCTGGTaGGCACAAGCCAGGAACACCACCAGGTCAGGGGTGCAGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PCCSARFCNLSLSLW*AQARNTTRSGVQIW Trigger: CCAGATCTGCACCCCTGACCTGGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 72 bp | GCCCCTGCTGCTCCGCACGCTTCTGTAACCTCTCCTTaGGCCTCTGGTTGGCACAAGCCAGGAACACCACCA | + |
|
Preference number: 6 (lower is better) Translates to: APAAPHASVTSP*ASGWHKPGTPP Trigger: TGGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS GCA 72 bp | TGGGTTGCTTTCAGGTTGTCATCTGGCCGCCCCTGCTaGTCCGCACGCTTCTGTAACCTCTCCTTGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WVAFRLSSGRPC*SARFCNLSLSL Trigger: GAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 72 bp | GCTCCGCCGTCTCCGACAGGTCCGTGTCACTCTCTATaGAAAACTGGTGGATTGGAGGGAGCCGGTCATACC | + |
|
Preference number: 6 (lower is better) Translates to: APPSPTGPCHSL*KTGGLEGAGHT Trigger: GGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGTCGGAGACGGCGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 72 bp | TGCTCCGCACGCTTCTGTAACCTCTCCTTGAGCCTCTaGTTGGCACAAGCCAGGAACACCACCAGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSARFCNLSLSL*LAQARNTTRSG Trigger: CCCTGACCTGGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 72 bp | TCCGCACGCTTCTGTAACCTCTCCTTGAGCCTCTGGTaGGCACAAGCCAGGAACACCACCAGGTCAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SARFCNLSLSLW*AQARNTTRSGV Trigger: CACCCCTGACCTGGTGGTGTTCCTGGCTTGTGCCAACCAGAGGCTCAAGGAGAGGTTACAGAAGCGTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS GCA 72 bp | CTTTGGGTTGCTTTCAGGTTGTCATCTGGCCGCCCCTaGTGCTCCGCACGCTTCTGTAACCTCTCCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LWVAFRLSSGRP*CSARFCNLSLS Trigger: GCTCAAGGAGAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 90 bp | CCCGAGGGCACCAGATCTCCACGCTCCATGATGTCACGGATCAGTTaGCTTCTTTCTGACTCTGAGGTCAGTTCCTGGCGCAGGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PEGTRSPRSMMSRIS*LLSDSEVSSWRRSS Trigger: TGAGCTCCTGCGCCAGGAACTGACCTCAGAGTCAGAAAGAAGCAAACTGATCCGTGACATCATGGAGCGTGGAGATCTGGTGCCCTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS TCA 72 bp | GAACACATCAAGCCATTGAGCAGGCTCTCGAAAAGCTaGGGAATGTCCCTCCGGGCCAGGTACTCCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: EHIKPLSRLSKS*GMSLRARYSLA Trigger: CGCCAAGGAGTACCTGGCCCGGAGGGACATTCCTCAGCTTTTCGAGAGCCTGCTCAATGGCTTGATGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 72 bp | TTACCTTCCGTAGCTGTGTTTTCCTCTCGTAGTAGGTaGCGACGGGGATGGACGCTCGGTGGTAGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPSVAVFSSRSR*RRGWTLGGRPP Trigger: TGGAGGCCTACCACCGAGCGTCCATCCCCGTCGTCACCTACTACGAGAGGAAAACACAGCTACGGAAGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS TCA 72 bp | TGTACTTCCGTAGCTGTGTTTTCCTCTCGTAGTAGGTaGCGACGGGGATGGACGCTCGGTGGTAGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CTSVAVFSSRSR*RRGWTLGGRPP Trigger: TGGAGGCCTACCACCGAGCGTCCATCCCCGTCGTCACCTACTACGAGAGGAAAACACAGCTACGGAAGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200062.2 |
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| CDS CCA 72 bp | GGGGCGGCATTCTGCTTGAAGTTCACTAGTCTCCTTTaGGTTGCTTTCAGGTTGTCATCTGGCCGCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GAAFCLKFTSLL*VAFRLSSGRPC Trigger: GCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CCA 72 bp | TCCGACAGGTCCGTGTCACTCTCTATGGAAAACTGGTaGATTGGAGGGAGCCGGTCATACCGCCGATATGGA | + |
|
Preference number: 6 (lower is better) Translates to: SDRSVSLSMENW*IGGSRSYRRYG Trigger: TCCATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CCA 72 bp | GTCTCCGACAGGTCCGTGTCACTCTCTATGGAAAACTaGTGGATTGGAGGGAGCCGGTCATACCGCCGATAT | + |
|
Preference number: 6 (lower is better) Translates to: VSDRSVSLSMEN*WIGGSRSYRRY Trigger: ATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGTCGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CAA 72 bp | TTGAAGTTCACTAGTCTCCTTTGGGTTGCTTTCAGGTaGTCATCTGGCCGCCCCTGCTGCTCCGCACGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKFTSLLWVAFR*SSGRPCCSARF Trigger: GAAGCGTGCGGAGCAGCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CAA 90 bp | GCATTCTGCTTGAAGTTCACTAGTCTCCTTTGGGTTGCTTTCAGGTaGTCATCTGGCCGCCCCTGCTGCTCCGCACGCTTCTGTAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: AFCLKFTSLLWVAFR*SSGRPCCSARFCNL Trigger: GAGGTTACAGAAGCGTGCGGAGCAGCAGGGGCGGCCAGATGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 72 bp | CTTTGTTTGGAAACAGCTTGCTGTCGACGGCCACGCTaGTGTCATGGAACACTGCGTCTTCATCTCGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLETACCRRPR*CHGTLRLHLGR Trigger: CCGACCGAGATGAAGACGCAGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAGCTGTTTCCAAACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 72 bp | GAACGACACCCGAGGGCACCAGATCTCCACGCTCCATaGTGTCACGGATCAGTTTGCTTCTTTCTGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ERHPRAPDLHAP*CHGSVCFFLTL Trigger: CAGAGTCAGAAAGAAGCAAACTGATCCGTGACATCATGGAGCGTGGAGATCTGGTGCCCTCGGGTGTCGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS TCA 72 bp | GCTTCTCTGAAGAAGGCGGTTAGTCATGGTGTCTGCTaGGCAGTCCATGCAGATCACCAAGTGTGGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLKKAVSHGVC*AVHADHQVWVS Trigger: GGAGACCCACACTTGGTGATCTGCATGGACTGCTCAGCAGACACCATGACTAACCGCCTTCTTCAGAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS GCA 72 bp | CTTGCTGTCGACGGCCACGCTGATGTCATGGAACACTaGGTCTTCATCTCGGTCGGCATCAAAAGTCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: LAVDGHADVMEH*VFISVGIKSHD Trigger: ATCGTGACTTTTGATGCCGACCGAGATGAAGACGCAGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 72 bp | GGAAACAGCTTGCTGTCGACGGCCACGCTGATGTCATaGAACACTGCGTCTTCATCTCGGTCGGCATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GNSLLSTATLMS*NTASSSRSASK Trigger: TTTTGATGCCGACCGAGATGAAGACGCAGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAGCTGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 72 bp | CAGGTCCGTGTCACTCTCTATGGAAAACTGGTGGATTaGAGGGAGCCGGTCATACCGCCGATATGGAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: QVRVTLYGKLVD*REPVIPPIWKV Trigger: AACTTTCCATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 72 bp | CGGTCGGCATCAAAAGTCACGATGAGTCCCTTCTCTTaGAAGTACTTCACTAGTGGGGCGGCATTCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSASKVTMSPFS*KYFTSGAAFCL Trigger: CAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAGAGAAGGGACTCATCGTGACTTTTGATGCCGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CCA 72 bp | GTCAGTTCCTGGCGCAGGAGCTCACCAGTAGAGAGATaGGTGAAGCCATATTTTTCTGCCAGCTTCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: VSSWRRSSPVER*VKPYFSASFSH Trigger: GTGTGAGAAGCTGGCAGAAAAATATGGCTTCACCCATCTCTCTACTGGTGAGCTCCTGCGCCAGGAACTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045262.11 ENSMUST00000200062.2 |
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| CDS CAA 72 bp | ACAGGTCCGTGTCACTCTCTATGGAAAACTGGTGGATaGGAGGGAGCCGGTCATACCGCCGATATGGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: TGPCHSLWKTGG*EGAGHTADMES Trigger: ACTTTCCATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 90 bp | CCGTCTCCGACAGGTCCGTGTCACTCTCTATGGAAAACTGGTGGATaGGAGGGAGCCGGTCATACCGCCGATATGGAAAGTTTGAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSPTGPCHSLWKTGG*EGAGHTADMESLNF Trigger: AAAATTCAAACTTTCCATATCGGCGGTATGACCGGCTCCCTCCAATCCACCAGTTTTCCATAGAGAGTGACACGGACCTGTCGGAGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 90 bp | TCAAGGTCACTTGAATCCATCGGAGCCTCTTTGTTTGGAAACAGCTaGCTGTCGACGGCCACGCTGATGTCATGGAACACTGCGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRSLESIGASLFGNS*LSTATLMSWNTASS Trigger: TGAAGACGCAGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAGCTGTTTCCAAACAAAGAGGCTCCGATGGATTCAAGTGACCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 72 bp | CTCCATTTAGGGGCGGTAACGTCTTCTTTTCCTGGCTaGCAAATGTGTCCCACTTCACCTTGTCACAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLGAVTSSFPG*QMCPTSPCHSL Trigger: GAGGCTGTGACAAGGTGAAGTGGGACACATTTGTCAGCCAGGAAAAGAAGACGTTACCGCCCCTAAATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 72 bp | CTTGAATCCATCGGAGCCTCTTTGTTTGGAAACAGCTaGCTGTCGACGGCCACGCTGATGTCATGGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: LESIGASLFGNS*LSTATLMSWNT Trigger: AGTGTTCCATGACATCAGCGTGGCCGTCGACAGCAAGCTGTTTCCAAACAAAGAGGCTCCGATGGATTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 90 bp | GGGTGCAGATCTGGTCCTCAAAAGACAGAGCCTGGGCAACATCCCTaGGGAATCCATCAATCACAATGCCTTCTTCATCGGGTATTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCRSGPQKTEPGQHP*GIHQSQCLLHRVFA Trigger: TGCAAATACCCGATGAAGAAGGCATTGTGATTGATGGATTCCCAAGGGATGTTGCCCAGGCTCTGTCTTTTGAGGACCAGATCTGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 72 bp | TGGAGGGAGCCGGTCATACCGCCGATATGGAAAGTTTaGATTTTCAGGCATGACATTTCGGAGGAAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: WREPVIPPIWKV*IFRHDISEEGS Trigger: AGATCCTTCCTCCGAAATGTCATGCCTGAAAATTCAAACTTTCCATATCGGCGGTATGACCGGCTCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS TCA 72 bp | CTTGGAAGTACTTCACTAGTGGGGCGGCATTCTGCTTaGAGTTCACTAGTCTCCTTTGGGTTGCTTTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGSTSLVGRHSA*SSLVSFGLLSG Trigger: ACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 72 bp | TCTTGGAAGTACTTCACTAGTGGGGCGGCATTCTGCTaGAAGTTCACTAGTCTCCTTTGGGTTGCTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWKYFTSGAAFC*KFTSLLWVAFR Trigger: CCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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| CDS CAA 90 bp | AGTCCCTTCTCTTGGAAGTACTTCACTAGTGGGGCGGCATTCTGCTaGAAGTTCACTAGTCTCCTTTGGGTTGCTTTCAGGTTGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SPFSWKYFTSGAAFC*KFTSLLWVAFRLSS Trigger: AGATGACAACCTGAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAGAGAAGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS GCA 72 bp | TTCTCTTGGAAGTACTTCACTAGTGGGGCGGCATTCTaGTTGAAGTTCACTAGTCTCCTTTGGGTTGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSWKYFTSGAAF*LKFTSLLWVAF Trigger: GAAAGCAACCCAAAGGAGACTAGTGAACTTCAAGCAGAATGCCGCCCCACTAGTGAAGTACTTCCAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CAA 72 bp | CTCCAGCATCAAACATCATGGAAGGGTCAAGGTCACTaGAATCCATCGGAGCCTCTTTGTTTGGAAACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LQHQTSWKGQGH*NPSEPLCLETA Trigger: AGCTGTTTCCAAACAAAGAGGCTCCGATGGATTCAAGTGACCTTGACCCTTCCATGATGTTTGATGCTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CAA 90 bp | CTGACAAATGTGTCCCACTTCACCTTGTCACAGCCTCCTAGCTCCTaGACTTTCTGTAAACAAGTTTCCAAGTACTCTATGGGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LTNVSHFTLSQPPSS*TFCKQVSKYSMGSS Trigger: AGAAGACCCCATAGAGTACTTGGAAACTTGTTTACAGAAAGTCAAGGAGCTAGGAGGCTGTGACAAGGTGAAGTGGGACACATTTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS TCA 72 bp | TGTCCCACTTCACCTTGTCACAGCCTCCTAGCTCCTTaGCTTTCTGTAAACAAGTTTCCAAGTACTCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: CPTSPCHSLLAP*LSVNKFPSTLW Trigger: CCATAGAGTACTTGGAAACTTGTTTACAGAAAGTCAAGGAGCTAGGAGGCTGTGACAAGGTGAAGTGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS TCA 72 bp | TACTGGAATCCATACCGCTCTGCAATTTTCAAACTCTaGGTACCCTTTCCACTTCCTGGACCACCTATGACA | + |
|
Preference number: 6 (lower is better) Translates to: YWNPYRSAIFKL*VPFPLPGPPMT Trigger: TGTCATAGGTGGTCCAGGAAGTGGAAAGGGTACTCAGAGTTTGAAAATTGCAGAGCGGTATGGATTCCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS TCA 72 bp | TCCAGCATCAAACATCATGGAAGGGTCAAGGTCACTTaGATCCATCGGAGCCTCTTTGTTTGGAAACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSIKHHGRVKVT*IHRSLFVWKQL Trigger: AAGCTGTTTCCAAACAAAGAGGCTCCGATGGATTCAAGTGACCTTGACCCTTCCATGATGTTTGATGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CAA 72 bp | GTGTCCCACTTCACCTTGTCACAGCCTCCTAGCTCCTaGACTTTCTGTAAACAAGTTTCCAAGTACTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: VSHFTLSQPPSS*TFCKQVSKYSM Trigger: CATAGAGTACTTGGAAACTTGTTTACAGAAAGTCAAGGAGCTAGGAGGCTGTGACAAGGTGAAGTGGGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CAA 72 bp | TTTCCACTTCCTGGACCACCTATGACAAGAATGATTTaGGGCCGAGGTCTAGTCGGGTCAAAAACCTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: FPLPGPPMTRMI*GRGLVGSKTSY Trigger: ATATGAGGTTTTTGACCCGACTAGACCTCGGCCCAAAATCATTCTTGTCATAGGTGGTCCAGGAAGTGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS GCA 72 bp | CCTGGGCAACATCCCTTGGGAATCCATCAATCACAATaGCTTCTTCATCGGGTATTTGCATCAATTTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGQHPLGIHQSQ*LLHRVFASIFV Trigger: AACAAAAATTGATGCAAATACCCGATGAAGAAGGCATTGTGATTGATGGATTCCCAAGGGATGTTGCCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
||
| CDS CAA 72 bp | TTGGTGATTATCTTGGCGATCAGACTCCATTTTCTGTaGCTGCTGGCACTGTGGATTTTCTTCCTCAATAAT | + |
|
Preference number: 6 (lower is better) Translates to: LVIILAIRLHFL*LLALWIFFLNN Trigger: ATTATTGAGGAAGAAAATCCACAGTGCCAGCAGCAACAGAAAATGGAGTCTGATCGCCAAGATAATCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045262.11 |
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