Pregenerated sensors for AK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024782Ensembl transcript IDs: ENSMUST00000025696.5, ENSMUST00000125587.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGGGAGGCAGAAACAGGTGATGGCTCTGAGTTTGAAGCCAGCCTaGCTACAGAGTTCAGGGCAGTCAACTACAGTGAGATCCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LGRQKQVMALSLKPA*LQSSGQSTTVRSCQ Trigger: CTGACAGGATCTCACTGTAGTTGACTGCCCTGAACTCTGTAGTCAGGCTGGCTTCAAACTCAGAGCCATCACCTGTTTCTGCCTCCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR GCA 90 bp | GAAGGGCCAGGGGCAAAGGGCAACAGCCACAGTGCTGAGATCACCTaGAGATCAGTCCTAGCTTTAGGTAATTCACAACAGGTTGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: EGPGAKGNSHSAEIT*RSVLALGNSQQVVG Trigger: TCCTACAACCTGTTGTGAATTACCTAAAGCTAGGACTGATCTGCAGGTGATCTCAGCACTGTGGCTGTTGCCCTTTGCCCCTGGCCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR TCA 90 bp | AAAGAGGGAAACAAACGGGTAGGTCCTAAAACTTGGTCCTCACCCTaGGTGACACGGGAGAACTTAGGACTTAATGCCATTGTCAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: KEGNKRVGPKTWSSP*VTRENLGLNAIVSA Trigger: GGCACTGACAATGGCATTAAGTCCTAAGTTCTCCCGTGTCACTCAGGGTGAGGACCAAGTTTTAGGACCTACCCGTTTGTTTCCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 90 bp | GGCTGCATTTTCACAGCAGATTGGATAAGTAGAGGACACACAGCATaGTGGCCTGTTCCCTTGGCTTTTCCTGTTAAGGTAGCAGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: GCIFTADWISRGHTA*WPVPLAFPVKVAVS Trigger: ACTCACTGCTACCTTAACAGGAAAAGCCAAGGGAACAGGCCACCATGCTGTGTGTCCTCTACTTATCCAATCTGCTGTGAAAATGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 90 bp | TGCATTTTCACAGCAGATTGGATAAGTAGAGGACACACAGCATGGTaGCCTGTTCCCTTGGCTTTTCCTGTTAAGGTAGCAGTGAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: CIFTADWISRGHTAW*PVPLAFPVKVAVSL Trigger: TAAACTCACTGCTACCTTAACAGGAAAAGCCAAGGGAACAGGCCACCATGCTGTGTGTCCTCTACTTATCCAATCTGCTGTGAAAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCTTTCTGGCAAAACCAGCAACCACGCAGGAACGAGGAGGACCAAGTCAGGCCCTGCCTACTTTCTaGTCGTCTTTTCTTTACAGA | + |
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Preference number: 2 (lower is better) Translates to: MAFLAKPATTQERGGPSQALPTF*SSFLYR Trigger: TCTGTAAAGAAAAGACGACCAGAAAGTAGGCAGGGC...CTGACTTGGTCCTCCTCGTTCCTGCGTGGTTGCTGGTTTTGCCAGAAAGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125587.2 |
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| 3UTR-3UTR GCA 90 bp | CACGAAAGAGGATGGCATGGCCTTTCTGGCAAAACCAGCAACCACGCAGGAACGGGAAAGTCAAAACCTTaGTTGTGCAAGCTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: HERGWHGLSGKTSNHAGTGKSKP*LCKLRR Trigger: TCTTCTCAGCTTGCACAAGCAAGGTTTTGACTTTCC...CGTTCCTGCGTGGTTGCTGGTTTTGCCAGAAAGGCCATGCCATCCTCTTTCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125587.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATGAACAGAAGGTTAGATaGTCACCAGTTGCTCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: AEDKPQYRMPAQHSGWLDEQKVR*SPVALR Trigger: TCGGAGAGCAACTGGTGACCATCTAACCTTCTGTTC...ATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGATCCCACTGCTGTAAGTAGAAGAGGAGGCTGCTTAGATGGTACCAGAAGACTACGTGCCAGTGGCTaGATTTTCACAGCAGATTGG | + |
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Preference number: 2 (lower is better) Translates to: LDPTAVSRRGGCLDGTRRLRASG*IFTADW Trigger: CCAATCTGCTGTGAAAATGCAGCCACTGGCACGTAG...TCTTCTGGTACCATCTAAGCAGCCTCCTCTTCTACTTACAGCAGTGGGATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR GCA 90 bp | ACGCAGGAACGAGGAGGACCAAGTCAGTACATAAAAGCAGGCGAACCCAGGAGATCAAAACCTTGCTTGTaGAAGCTGAGAAGAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: TQERGGPSQYIKAGEPRRSKPCL*KLRRAR Trigger: TCTTGCTCTTCTCAGCTTGCACAAGCAAGGTTTTGA...TCTCCTGGGTTCGCCTGCTTTTATGTACTGACTTGGTCCTCCTCGTTCCTGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125587.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCCCCTTTAAATTAGGGTaGGAAGTGGTAGCACACAGT | + |
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Preference number: 2 (lower is better) Translates to: LKINHSIGCLPSTQAGWIPFKLG*EVVAHS Trigger: ACTGTGTGCTACCACTTCCCACCCTAATTTAAAGGG...GATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR CCA 90 bp | AAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCCCAAGGAGGCTGCTTAGATaGTACCAGAAGAATTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: KINHSIGCLPSTQAGWIPRRLLR*YQKNCF Trigger: GAAGCAATTCTTCTGGTACCATCTAAGCAGCCTCCT...TGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CAA 90 bp | ATTCCCATGGGTGTGGTGTCACCCTTTAGTTTTCTGTTTACTGTCTaGCTCATCAAGGCAGGCAGTCCGCTTGGATCAAAGAGGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: IPMGVVSPFSFLFTV*LIKAGSPLGSKRET Trigger: TGTTTCCCTCTTTGATCCAAGCGGACTGCCTGCCTTGATGAGCAAGACAGTAAACAGAAAACTAAAGGGTGACACCACACCCATGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR TCA 90 bp | ATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCCCACTGTTGTTTCAACATCTCTaGCGTTTTCCAATTGCACGT | + |
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Preference number: 2 (lower is better) Translates to: INHSIGCLPSTQAGWIPLLFQHL*RFPIAR Trigger: ACGTGCAATTGGAAAACGTCAGAGATGTTGAAACAA...CAGTGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR CCA 90 bp | AAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCCCACTAAGTCATACACCTTaGTCCATATCCAAGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: KINHSIGCLPSTQAGWIPLSHTP*SISKSH Trigger: GTGTGACTTGGATATGGACCAAGGTGTATGACTTAG...TGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCCCACTGCTTTTGAACCCACCATaGAAAATCCTATTACTACAC | + |
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Preference number: 2 (lower is better) Translates to: INHSIGCLPSTQAGWIPLLLNPP*KILLLH Trigger: GTGTAGTAATAGGATTTTGCATGGTGGGTTCAAAAG...CAGTGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCGTAAAGCCTGTTGCTTaGTTTCTGAAATCTATAGAC | + |
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Preference number: 2 (lower is better) Translates to: LKINHSIGCLPSTQAGWIVKPVA*FLKSID Trigger: GTCTATAGATTTCAGAAAGCAAGCAACAGGCTTTAC...GATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGCTGAGATCACCTGCAGATCAGTCCTAGCTTTAGGTAATTCACAACAGAATTGCAGTGGGCATTaGCTTATTGAAAAGCCTCGA | + |
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Preference number: 2 (lower is better) Translates to: HSAEITCRSVLALGNSQQNCSGH*LIEKPR Trigger: TCGAGGCTTTTCAATAAGCCAATGCCCACTGCAATT...CTGTTGTGAATTACCTAAAGCTAGGACTGATCTGCAGGTGATCTCAGCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGTGCTGAGATCACCTGCAGATCAGTCCTAGCTTTAGGTAATTCACAACAGTTAGGAAAAGAGCTTTaGGATACAGAGGCAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: HSAEITCRSVLALGNSQQLGKEL*DTEARR Trigger: TCTTCTTGCCTCTGTATCTCAAAGCTCTTTTCCTAA...CTGTTGTGAATTACCTAAAGCTAGGACTGATCTGCAGGTGATCTCAGCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGACTGACATTTTAAAATGGATTCTTAGGGTTGGTTTAGTGGTACACACCACTTGGTCCTCACCCTaGGTGACACGGGAGAACTTA | + |
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Preference number: 2 (lower is better) Translates to: KVTDILKWILRVGLVVHTTWSSP*VTRENL Trigger: TAAGTTCTCCCGTGTCACTCAGGGTGAGGACCAAGT...GGTGTGTACCACTAAACCAACCCTAAGAATCCATTTTAAAATGTCAGTCACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTCTAATACCACATCCCTTCAGGCCAGAAAACATCTTCCTGAATTGCAGTTGTGATCAACCACTTTaGCTAACTGAACAGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: CLLIPHPFRPENIFLNCSCDQPL*LTEQKV Trigger: AACCTTCTGTTCAGTTAGTCAAAGTGGTTGATCACA...ACTGCAATTCAGGAAGATGTTTTCTGGCCTGAAGGGATGTGGTATTAGAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAGAGGCCGAGACAAGAGGATCTTTAATTTAGAACTTCAACACAGGTATTGGGCATTGGCTTATTaGAAAGCCTCGAATGAGATT | + |
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Preference number: 2 (lower is better) Translates to: LERGRDKRIFNLELQHRYWALAY*KASNEI Trigger: AATCTCATTCGAGGCTTTTCAATAAGCCAATGCCCA...ATACCTGTGTTGAAGTTCTAAATTAAAGATCCTCTTGTCTCGGCCTCTCTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGACTGACATTTTAAAATGGATTCTTAGGGTTGGTTTAGTGGTACACACCATCAGGCTAAGTATCTaGCTCATTTGGCTTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: KVTDILKWILRVGLVVHTIRLSI*LIWLSH Trigger: ATGGCTAAGCCAAATGAGTCAGATACTTAGCCTGAT...GGTGTGTACCACTAAACCAACCCTAAGAATCCATTTTAAAATGTCAGTCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 72 bp | AAAGAAGCCTGTGAGACATTGTGGCAGCAGACAGGATaGGGGTTTGTGAAGGGCCAGGGGCAAAGGGCAACA | + |
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Preference number: 3 (lower is better) Translates to: KEACETLWQQTG*GFVKGQGQRAT Trigger: TGTTGCCCTTTGCCCCTGGCCCTTCACAAACCCCCATCCTGTCTGCTGCCACAATGTCTCACAGGCTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR GCA 72 bp | CAACAGAAGGGGCTGAAGATAAACCACAGTATAGGATaGCTGCCCAGCACTCAGGCTGGTTGGATCCCACTG | + |
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Preference number: 3 (lower is better) Translates to: QQKGLKINHSIG*LPSTQAGWIPL Trigger: CAGTGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTTCAGCCCCTTCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 72 bp | AAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTaGTTGGATCCCACTGCTGTAAGTAGAAGAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: KPQYRMPAQHSG*LDPTAVSRRGG Trigger: GCCTCCTCTTCTACTTACAGCAGTGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR TCA 72 bp | CAGCCTGACTACAGAGTTCAGGGCAGTCAACTACAGTaGGATCCTGTCAGAGCAACAGAACTGAGCCACCAC | + |
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Preference number: 3 (lower is better) Translates to: QPDYRVQGSQLQ*DPVRATELSHH Trigger: GTGGTGGCTCAGTTCTGTTGCTCTGACAGGATCTCACTGTAGTTGACTGCCCTGAACTCTGTAGTCAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 72 bp | AAAGGTCTACTCAGCCCTTCACGAAAGAGGATGGCATaGCCTTTCTGGCAAAACCAGCAACCACGCAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: KGLLSPSRKRMA*PFWQNQQPRRN Trigger: GTTCCTGCGTGGTTGCTGGTTTTGCCAGAAAGGCCATGCCATCCTCTTTCGTGAAGGGCTGAGTAGACCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125587.2 |
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| 3UTR CCA 72 bp | TCCCTACGTGCCAGTGGCTGCATTTTCACAGCAGATTaGATAAGTAGAGGACACACAGCATGGTGGCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SLRASGCIFTAD*ISRGHTAWWPV Trigger: AACAGGCCACCATGCTGTGTGTCCTCTACTTATCCAATCTGCTGTGAAAATGCAGCCACTGGCACGTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR TCA 72 bp | CAGAAACAGGTGATGGCTCTGAGTTTGAAGCCAGCCTaGCTACAGAGTTCAGGGCAGTCAACTACAGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QKQVMALSLKPA*LQSSGQSTTVR Trigger: TCTCACTGTAGTTGACTGCCCTGAACTCTGTAGTCAGGCTGGCTTCAAACTCAGAGCCATCACCTGTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR GCA 72 bp | CCATATCCAAGTCACACGTCCCTACGTGCCAGTGGCTaGATTTTCACAGCAGATTGGATAAGTAGAGGACAC | + |
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Preference number: 3 (lower is better) Translates to: PYPSHTSLRASG*IFTADWISRGH Trigger: GTGTCCTCTACTTATCCAATCTGCTGTGAAAATGCAGCCACTGGCACGTAGGGACGTGTGACTTGGATATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR GCA 72 bp | ACACCTTGGTCCATATCCAAGTCACACGTCCCTACGTaGCAGTGGCTGCATTTTCACAGCAGATTGGATAAG | + |
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Preference number: 3 (lower is better) Translates to: TPWSISKSHVPT*QWLHFHSRLDK Trigger: CTTATCCAATCTGCTGTGAAAATGCAGCCACTGGCACGTAGGGACGTGTGACTTGGATATGGACCAAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 72 bp | AGGCGAACCCAGGAGACTGAAGCCCTGCCTACTTTCTaGTCGTCTTTTCTTTACAGAAGCCTAGAAATGTCC | + |
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Preference number: 3 (lower is better) Translates to: RRTQETEALPTF*SSFLYRSLEMS Trigger: GGACATTTCTAGGCTTCTGTAAAGAAAAGACGACCAGAAAGTAGGCAGGGCTTCAGTCTCCTGGGTTCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125587.2 |
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| 3UTR CCA 72 bp | GTTTACTGTCTTGCTCATCAAGGCAGGCAGTCCGCTTaGATCAAAGAGGGAAACAAACGGGTAGGTCCTAAA | + |
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Preference number: 3 (lower is better) Translates to: VYCLAHQGRQSA*IKEGNKRVGPK Trigger: TTTAGGACCTACCCGTTTGTTTCCCTCTTTGATCCAAGCGGACTGCCTGCCTTGATGAGCAAGACAGTAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 72 bp | CCCGTCTACTTGCAGAGTGGCAAATTCCCATGGGTGTaGTGTCACCCTTTAGTTTTCTGTTTACTGTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: PVYLQSGKFPWV*CHPLVFCLLSC Trigger: GCAAGACAGTAAACAGAAAACTAAAGGGTGACACCACACCCATGGGAATTTGCCACTCTGCAAGTAGACGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 72 bp | GCATGTCCCGTCTACTTGCAGAGTGGCAAATTCCCATaGGTGTGGTGTCACCCTTTAGTTTTCTGTTTACTG | + |
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Preference number: 3 (lower is better) Translates to: ACPVYLQSGKFP*VWCHPLVFCLL Trigger: CAGTAAACAGAAAACTAAAGGGTGACACCACACCCATGGGAATTTGCCACTCTGCAAGTAGACGGGACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR CAA 90 bp | AAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCCCACTTAGGAAAAGAGCTTaGAGATACAGAGGCAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: KINHSIGCLPSTQAGWIPLRKRA*RYRGKK Trigger: CTTCTTGCCTCTGTATCTCAAAGCTCTTTTCCTAAG...TGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGAAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCTATTACTACACCTGTaGTGTAGTGGAATTAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: AEDKPQYRMPAQHSGWLDLLLHL*CSGISQ Trigger: CTGACTAATTCCACTACACAACAGGTGTAGTAATAG...ATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR TCA 72 bp | AACAAACGGGTAGGTCCTAAAACTTGGTCCTCACCCTaGGTGACACGGGAGAACTTAGGACTTAATGCCATT | + |
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Preference number: 3 (lower is better) Translates to: NKRVGPKTWSSP*VTRENLGLNAI Trigger: AATGGCATTAAGTCCTAAGTTCTCCCGTGTCACTCAGGGTGAGGACCAAGTTTTAGGACCTACCCGTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR GCA 72 bp | CCACATCCCTTCAGGCCAGAAAACATCTTCCTGAATTaGAGTGGGCATTGGCTTATTGAAAAGCCTCGAATG | + |
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Preference number: 3 (lower is better) Translates to: PHPFRPENIFLN*SGHWLIEKPRM Trigger: CATTCGAGGCTTTTCAATAAGCCAATGCCCACTGCAATTCAGGAAGATGTTTTCTGGCCTGAAGGGATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR TCA 72 bp | CCAGTTGCTCTCCGAGTTAGTTTGTTTCAACATCTCTaGCGTTTTCCAATTGCACGTCCACAGAAGACAACC | + |
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Preference number: 3 (lower is better) Translates to: PVALRVSLFQHL*RFPIARPQKTT Trigger: GGTTGTCTTCTGTGGACGTGCAATTGGAAAACGTCAGAGATGTTGAAACAAACTAACTCGGAGAGCAACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR GCA 72 bp | TGTCCCTTCAGGCCACAATATGTAAGGGCAGGTCCTTaGCCCACTAAGAAATCTAAAGTGACTGACATTTTA | + |
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Preference number: 3 (lower is better) Translates to: CPFRPQYVRAGP*PTKKSKVTDIL Trigger: TAAAATGTCAGTCACTTTAGATTTCTTAGTGGGGCAAGGACCTGCCCTTACATATTGTGGCCTGAAGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR-3UTR CAA 90 bp | AAAGTGACTGACATTTTAAAATGGATTCTTAGGGTTGGTTTAGTGGTACACACCTGGTGGCCTGTTCCCTaGGCTTTTCCTGTTAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: KVTDILKWILRVGLVVHTWWPVP*AFPVKV Trigger: TACCTTAACAGGAAAAGCCAAGGGAACAGGCCACCA...GGTGTGTACCACTAAACCAACCCTAAGAATCCATTTTAAAATGTCAGTCACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CCA 72 bp | AGGCCAGAAAACATCTTCCTGAATTGCAGTGGGCATTaGCTTATTGAAAAGCCTCGAATGAGATTATTTATC | + |
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Preference number: 3 (lower is better) Translates to: RPENIFLNCSGH*LIEKPRMRLFI Trigger: GATAAATAATCTCATTCGAGGCTTTTCAATAAGCCAATGCCCACTGCAATTCAGGAAGATGTTTTCTGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR GCA 72 bp | AGCAGTGAGTTTACATTTAACATCTGTAAAGCCTGTTaGTTGCTTTCTGAAATCTATAGACAGTGTCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SSEFTFNICKAC*LLSEIYRQCLL Trigger: TAGAAGACACTGTCTATAGATTTCAGAAAGCAAGCAACAGGCTTTACAGATGTTAAATGTAAACTCACTGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR TCA 90 bp | TGGCAGCAGACAGGATGGGGGTTTGTGAAGGGCCAGGGGCAAAGGGCAACAGCCGCTCGAAGTGTTTGGTaGTGCGTGACGACACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: WQQTGWGFVKGQGQRATAARSVW*CVTTRC Trigger: GCACCGTGTCGTCACGCATCACCAAACACTTCGAGC...GGCTGTTGCCCTTTGCCCCTGGCCCTTCACAAACCCCCATCCTGTCTGCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR GCA 90 bp | CACAGTGCTGAGATCACCTGCAGATCAGTCCTAGCTTTAGGTAATTCACAACAGTGCGTGACGACACGGTaGCCTTGCCGGAGCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: HSAEITCRSVLALGNSQQCVTTR*PCRSPG Trigger: CCCCGGGCTCCGGCAAGGGCACCGTGTCGTCACGCA...CTGTTGTGAATTACCTAAAGCTAGGACTGATCTGCAGGTGATCTCAGCACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CAA 72 bp | CCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTaGGATCCCACTGCTGTAAGTAGAAGAGGAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PQYRMPAQHSGW*DPTAVSRRGGC Trigger: GCAGCCTCCTCTTCTACTTACAGCAGTGGGATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR GCA 90 bp | TGTCTTCTAATACCACATCCCTTCAGGCCAGAAAACATCTTCCTGAATTGCAGTACGACACGGTGCCCTTaGCGGAGCCCGGGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: CLLIPHPFRPENIFLNCSTTRCP*RSPGPP Trigger: TGGGGGCCCCGGGCTCCGGCAAGGGCACCGTGTCGT...ACTGCAATTCAGGAAGATGTTTTCTGGCCTGAAGGGATGTGGTATTAGAAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR GCA 90 bp | ATGTCCCGTCTACTTGCAGAGTGGCAAATTCCCATGGGTGTGGTGTCACCCTTTCCGATTTCTGTGCCCTaGAGCATGTTCTGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: MSRLLAEWQIPMGVVSPFPISVP*SMFWRS Trigger: GCTCCGCCAGAACATGCTGCAGGGCACAGAAATCGG...AAAGGGTGACACCACACCCATGGGAATTTGCCACTCTGCAAGTAGACGGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR CCA 90 bp | ATGGCCTTTCTGGCAAAACCAGCAACCACGCAGGAACGAGGAGGACCAAGTCAGCTTGATCACTGTCTCTaGTTTGTCATCCTCGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: MAFLAKPATTQERGGPSQLDHCL*FVILAL Trigger: CAGCGCGAGGATGACAAACCAGAGACAGTGATCAAG...CTGACTTGGTCCTCCTCGTTCCTGCGTGGTTGCTGGTTTTGCCAGAAAGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125587.2 |
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| CDS-3UTR GCA 90 bp | CTGAAGATAAACCACAGTATAGGATGCCTGCCCAGCACTCAGGCTGGTTGGATCACACACCGATTTCTGTaGCCTGCAGCATGTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LKINHSIGCLPSTQAGWITHRFL*PAACSG Trigger: GCCAGAACATGCTGCAGGGCACAGAAATCGGTGTGT...GATCCAACCAGCCTGAGTGCTGGGCAGGCATCCTATACTGTGGTTTATCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR TCA 90 bp | TCTTCTAATACCACATCCCTTCAGGCCAGAAAACATCTTCCTGAATTGCAGTGGAGGGTTTTGAGCTCGTaGAGGGCCAGCCGAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: SSNTTSLQARKHLPELQWRVLSS*RASRVM Trigger: CATGACTCGGCTGGCCCTTCACGAGCTCAAAACCCT...CCACTGCAATTCAGGAAGATGTTTTCTGGCCTGAAGGGATGTGGTATTAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR CCA 90 bp | GGTGTGGTGTCACCCTTTAGTTTTCTGTTTACTGTCTTGCTCATCAAGGCAGGCCTTGATCACTGTCTCTaGTTTGTCATCCTCGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: GVVSPFSFLFTVLLIKAGLDHCL*FVILAL Trigger: CAGCGCGAGGATGACAAACCAGAGACAGTGATCAAG...GCCTGCCTTGATGAGCAAGACAGTAAACAGAAAACTAAAGGGTGACACCACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CAA 72 bp | GGTGTGGTGTCACCCTTTAGTTTTCTGTTTACTGTCTaGCTCATCAAGGCAGGCAGTCCGCTTGGATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GVVSPFSFLFTV*LIKAGSPLGSK Trigger: CTTTGATCCAAGCGGACTGCCTGCCTTGATGAGCAAGACAGTAAACAGAAAACTAAAGGGTGACACCACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR CCA 90 bp | ATCTCTGACGTTTTCCAATTGCACGTCCACAGAAGACAACCAGGTCCTAGATTAAGTCATGACGTCATCTaGGATCAGCTTTCCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: ISDVFQLHVHRRQPGPRLSHDVI*DQLSLV Trigger: GACCAAGGAAAGCTGATCCCAGATGACGTCATGACT...TAATCTAGGACCTGGTTGTCTTCTGTGGACGTGCAATTGGAAAACGTCAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CAA 72 bp | ATAAGTAGAGGACACACAGCATGGTGGCCTGTTCCCTaGGCTTTTCCTGTTAAGGTAGCAGTGAGTTTACAT | + |
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Preference number: 4 (lower is better) Translates to: ISRGHTAWWPVP*AFPVKVAVSLH Trigger: ATGTAAACTCACTGCTACCTTAACAGGAAAAGCCAAGGGAACAGGCCACCATGCTGTGTGTCCTCTACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR GCA 90 bp | AAAGTGACTGACATTTTAAAATGGATTCTTAGGGTTGGTTTAGTGGTACACACCCGGTCAGGTCATCAATaGCCACAGTCTTGGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KVTDILKWILRVGLVVHTRSGHQ*PQSWEG Trigger: ACCCTCCCAAGACTGTGGGCATTGATGACCTGACCG...GGTGTGTACCACTAAACCAACCCTAAGAATCCATTTTAAAATGTCAGTCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CAA 72 bp | TTGAACCCACCATGCAAAATCCTATTACTACACCTGTaGTGTAGTGGAATTAGTCAGTCTTTCTGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LNPPCKILLLHL*CSGISQSFCWG Trigger: CCCCCAGCAGAAAGACTGACTAATTCCACTACACAACAGGTGTAGTAATAGGATTTTGCATGGTGGGTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR CCA 90 bp | AAAGTGACTGACATTTTAAAATGGATTCTTAGGGTTGGTTTAGTGGTACACACCAACAGCCAGCTACACTaGGTAAGGGTTTTGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: KVTDILKWILRVGLVVHTNSQLH*VRVLSS Trigger: CGAGCTCAAAACCCTTACCCAGTGTAGCTGGCTGTT...GGTGTGTACCACTAAACCAACCCTAAGAATCCATTTTAAAATGTCAGTCACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| 3UTR CAA 72 bp | GAGTTAGTTTGTTTCAACATCTCTGACGTTTTCCAATaGCACGTCCACAGAAGACAACCAGGTCCTAGATTA | + |
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Preference number: 4 (lower is better) Translates to: ELVCFNISDVFQ*HVHRRQPGPRL Trigger: TAATCTAGGACCTGGTTGTCTTCTGTGGACGTGCAATTGGAAAACGTCAGAGATGTTGAAACAAACTAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR CCA 90 bp | AAAGTGACTGACATTTTAAAATGGATTCTTAGGGTTGGTTTAGTGGTACACACCGTAACAGAGGCCTTTTaGGTAGTTTCTGGAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: KVTDILKWILRVGLVVHTVTEAF*VVSGTF Trigger: GAAAGTTCCAGAAACTACCCAAAAGGCCTCTGTTAC...GGTGTGTACCACTAAACCAACCCTAAGAATCCATTTTAAAATGTCAGTCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR CAA 90 bp | ATGTCCCGTCTACTTGCAGAGTGGCAAATTCCCATGGGTGTGGTGTCACCCTTTTTCAGCTCGAAGTGTTaGGTGATGCGTGACGACACG | + |
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Preference number: 5 (lower is better) Translates to: MSRLLAEWQIPMGVVSPFFSSKC*VMRDDT Trigger: CGTGTCGTCACGCATCACCAAACACTTCGAGCTGAA...AAAGGGTGACACCACACCCATGGGAATTTGCCACTCTGCAAGTAGACGGGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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| CDS-3UTR CAA 90 bp | CATATCCAAGTCACACGTCCCTACGTGCCAGTGGCTGCATTTTCACAGCAGATTAGTAACAGAGGCCTTTaGGGTAGTTTCTGGAACTTT | + |
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Preference number: 5 (lower is better) Translates to: HIQVTRPYVPVAAFSQQISNRGL*GSFWNF Trigger: AAAGTTCCAGAAACTACCCAAAAGGCCTCTGTTACT...AATCTGCTGTGAAAATGCAGCCACTGGCACGTAGGGACGTGTGACTTGGATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025696.5 |
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