Pregenerated sensors for AK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028792Ensembl transcript IDs: ENSMUST00000030583.13, ENSMUST00000102604.11, ENSMUST00000152762.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCGTCTCTTCCATCCGCGCAGGTCAGTCTTCTCGCTTTATGGAGTaGGGAGCCCCCGGCAGTCAGCAGCCCCCTCCTCTGCACGGGATG | + |
|
Preference number: 1 (lower is better) Translates to: PVSSIRAGQSSRFME*GAPGSQQPPPLHGM Trigger: CATCCCGTGCAGAGGAGGGGGCTGCTGACTGCCGGGGGCTCCCCACTCCATAAAGCGAGAAGACTGACCTGCGCGGATGGAAGAGACGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR TCA 90 bp | GTGGTAGGCCTCCAGGCGGGTCTTCAAGGCTTTCTCGTTGTCATCTaGCCTGCGGATCAGGGGCTCCCCAGTGATATCATCTTTCATGGG | + |
|
Preference number: 1 (lower is better) Translates to: VVGLQAGLQGFLVVI*PADQGLPSDIIFHG Trigger: CCCATGAAAGATGATATCACTGGGGAGCCCCTGATCCGCAGGTCAGATGACAACGAGAAAGCCTTGAAGACCCGCCTGGAGGCCTACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152762.2 |
||
| 3UTR TCA 90 bp | AGGACTGAAGCCGGGGCTTTACAGAGCCAGGCACACACACGCCACTaGGCTACACTCCTAGGCCTTGTTCAGTTATCTAAAAGGGTCCCG | + |
|
Preference number: 1 (lower is better) Translates to: RTEAGALQSQAHTRH*ATLLGLVQLSKRVP Trigger: CGGGACCCTTTTAGATAACTGAACAAGGCCTAGGAGTGTAGCTCAGTGGCGTGTGTGTGCCTGGCTCTGTAAAGCCCCGGCTTCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR GCA 90 bp | TTAGAGAGCATTAGCTTTGTGGTCCAGAGAAAAGCAGAGGCTGACTaGTTAAAAATAATACCATGTCTCCTTATCTGCACCAATGCACTC | + |
|
Preference number: 1 (lower is better) Translates to: LESISFVVQRKAEAD*LKIIPCLLICTNAL Trigger: GAGTGCATTGGTGCAGATAAGGAGACATGGTATTATTTTTAAGCAGTCAGCCTCTGCTTTTCTCTGGACCACAAAGCTAATGCTCTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR GCA 90 bp | TCACAGTGTTGTCGGGCAATCCCAGTCCCAGGAGGTGAGGGGGACAATCCTTGGCAGGCCCAGCCTGACTaGTGTGCTCTGGGCCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SQCCRAIPVPGGEGDNPWQAQPD*CALGLG Trigger: CCCCAGGCCCAGAGCACAGCAGTCAGGCTGGGCCTG...CCAAGGATTGTCCCCCTCACCTCCTGGGACTGGGATTGCCCGACAACACTGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR TCA 90 bp | TCACAGTGTTGTCGGGCAATCCCAGTCCCAGGAGGTGAGGGGGACAATCCTTGGTGCACAGGCCCAGCCTaGCTGCTGTGCTCTGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQCCRAIPVPGGEGDNPWCTGPA*LLCSGP Trigger: AGGCCCAGAGCACAGCAGTCAGGCTGGGCCTGTGCA...CCAAGGATTGTCCCCCTCACCTCCTGGGACTGGGATTGCCCGACAACACTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGTTGTCGGGCAATCCCAGTCCCAGGAGGTGAGGGGGACAATCCTTGGATGCTGACTGCTGTGCTCTaGGCCTGGGGATCCATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QCCRAIPVPGGEGDNPWMLTAVL*AWGSMR Trigger: CCTCATGGATCCCCAGGCCCAGAGCACAGCAGTCAG...CATCCAAGGATTGTCCCCCTCACCTCCTGGGACTGGGATTGCCCGACAACACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR TCA 90 bp | TCATCTGACCTGCGGATCAGGGGCTCCCCAGTGATATCATCTTTCATGGGCTCCCGGCCACTCTTGGGGTaGATCAGCCTCCCAGTGATC | + |
|
Preference number: 2 (lower is better) Translates to: SSDLRIRGSPVISSFMGSRPLLG*ISLPVI Trigger: GATCACTGGGAGGCTGATTCACCCCAAGAGTGGCCG...GGAGCCCATGAAAGATGATATCACTGGGGAGCCCCTGATCCGCAGGTCAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152762.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCCATCCGCGCAGGTCAGTCTTCTCGCTTTATGGAGTGGGGAGCCCCCGGCCCTTATCTGCACCAATaGACTCCAATCACAGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSIRAGQSSRFMEWGAPGPYLHQ*TPITVF Trigger: AAAAACTGTGATTGGAGTGCATTGGTGCAGATAAGG...GCCGGGGGCTCCCCACTCCATAAAGCGAGAAGACTGACCTGCGCGGATGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAAGCAGAGGCTGACTGCTTAAAAATAATACCATGTCTCCTTATCTGCACCGGAGATGAGCAGGGGTaGGGTCTCGCCTGGCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RKAEADCLKIIPCLLICTGDEQG*GLAWPS Trigger: AGAAGGCCAGGCGAGACCGCACCCCTGCTCATCTCC...GGTGCAGATAAGGAGACATGGTATTATTTTTAAGCAGTCAGCCTCTGCTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR GCA 90 bp | TCATCTGACCTGCGGATCAGGGGCTCCCCAGTGATATCATCTTTCATGGGCTCCGAAGAAAGCCATTTTTaGACGAAGGAGTCTCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSDLRIRGSPVISSFMGSEESHF*TKESPN Trigger: ATTTGGAGACTCCTTCGTGCAAAAATGGCTTTCTTC...GGAGCCCATGAAAGATGATATCACTGGGGAGCCCCTGATCCGCAGGTCAGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152762.2 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTAAAAGGGTCCCGTGGATGAATGAAGGCAAGGTTTTAAGACTAGGGAGTAAAGCAGAGGCTGACTaGTTAAAAATAATACCATGT | + |
|
Preference number: 2 (lower is better) Translates to: LSKRVPWMNEGKVLRLGSKAEAD*LKIIPC Trigger: ACATGGTATTATTTTTAAGCAGTCAGCCTCTGCTTT...ACTCCCTAGTCTTAAAACCTTGCCTTCATTCATCCACGGGACCCTTTTAGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR GCA 72 bp | CCCTCCTCTGCACGGGATGCACAGGCCCAGCCTGACTaGTGTGCTCTGGGCCTGGGGATCCATGAGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PSSARDAQAQPD*CALGLGIHEVL Trigger: AAGAACCTCATGGATCCCCAGGCCCAGAGCACAGCAGTCAGGCTGGGCCTGTGCATCCCGTGCAGAGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGTTGTCGGGCAATCCCAGTCCCAGGAGGTGAGGGGGACAATCCTTGGATGGGGATCTGTTTCCCCTaGCTCCCCACAATTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QCCRAIPVPGGEGDNPWMGICFP*LPTIPG Trigger: TCCTGGAATTGTGGGGAGCAAGGGGAAACAGATCCC...CATCCAAGGATTGTCCCCCTCACCTCCTGGGACTGGGATTGCCCGACAACACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR-3UTR CAA 90 bp | TCATCTGACCTGCGGATCAGGGGCTCCCCAGTGATATCATCTTTCATGGGCTCCAGAAGAAAGCCATTTTaGCACGAAGGAGTCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSDLRIRGSPVISSFMGSRRKPF*HEGVSK Trigger: TTTGGAGACTCCTTCGTGCAAAAATGGCTTTCTTCT...GGAGCCCATGAAAGATGATATCACTGGGGAGCCCCTGATCCGCAGGTCAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152762.2 |
||
| 3UTR TCA 72 bp | GATCAGCAGCGAGTCTTGGATGCTGAACTCAATGACTaGATCGAGCTTCTCTTTCCTCTTCTCCATGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DQQRVLDAELND*IELLFPLLHEV Trigger: GACCTCATGGAGAAGAGGAAAGAGAAGCTCGATTCAGTCATTGAGTTCAGCATCCAAGACTCGCTGCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152762.2 |
||
| 3UTR CCA 72 bp | AATGAAGGCAAGGTTTTAAGACTAGGGAGTGCTGAGTaGCTGAAGGCTTTGTCACTAGAGCAAGCAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NEGKVLRLGSAE*LKALSLEQATL Trigger: CAGAGTTGCTTGCTCTAGTGACAAAGCCTTCAGCCACTCAGCACTCCCTAGTCTTAAAACCTTGCCTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| 3UTR CCA 72 bp | CTCCTAGGCCTTGTTCAGTTATCTAAAAGGGTCCCGTaGATGAATGAAGGCAAGGTTTTAAGACTAGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLGLVQLSKRVP*MNEGKVLRLGS Trigger: ACTCCCTAGTCTTAAAACCTTGCCTTCATTCATCCACGGGACCCTTTTAGATAACTGAACAAGGCCTAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR GCA 90 bp | AGGCCCAGCCTGACTGCTGTGCTCTGGGCCTGGGGATCCATGAGGTTCTTATGTTTCAGCCAGTTTGGGTaGCTGCGTCCCCTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSLTAVLWAWGSMRFLCFSQFG*LRPLAS Trigger: GCTGGCAAGGGGACGCAGGCACCCAAACTGGCTGAA...ACATAAGAACCTCATGGATCCCCAGGCCCAGAGCACAGCAGTCAGGCTGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAGCCTGACTGCTGTGCTCTGGGCCTGGGGATCCATGAGGTTCTTATGTACGATGTCAGGGGTCTaGGACGCATCGATGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSLTAVLWAWGSMRFLCTMSGV*DASMAQ Trigger: CTGCGCCATCGATGCGTCCCAGACCCCTGACATCGT...ACATAAGAACCTCATGGATCCCCAGGCCCAGAGCACAGCAGTCAGGCTGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR GCA 90 bp | TCATCTGACCTGCGGATCAGGGGCTCCCCAGTGATATCATCTTTCATGGGCTCCTTCAGCCAGTTTGGGTaGCTGCGTCCCCTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDLRIRGSPVISSFMGSFSQFG*LRPLAS Trigger: GCTGGCAAGGGGACGCAGGCACCCAAACTGGCTGAA...GGAGCCCATGAAAGATGATATCACTGGGGAGCCCCTGATCCGCAGGTCAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152762.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCACCTTCCTAACCATCACCACCCACTCCTTTCACAGACTGGAAGGAGATTCAGCCAGTTTGGGTaGCTGCGTCCCCTTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHLPNHHHPLLSQTGRRFSQFG*LRPLAS Trigger: GCTGGCAAGGGGACGCAGGCACCCAAACTGGCTGAA...TCTCCTTCCAGTCTGTGAAAGGAGTGGGTGGTGATGGTTAGGAAGGTGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR CCA 90 bp | CACCTTCCTAACCATCACCACCCACTCCTTTCACAGACTGGAAGGAGAGAGAGCACGATGTCAGGGGTCTaGGACGCATCGATGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLPNHHHPLLSQTGRRESTMSGV*DASMAQ Trigger: CTGCGCCATCGATGCGTCCCAGACCCCTGACATCGT...GCTCTCTCTCCTTCCAGTCTGTGAAAGGAGTGGGTGGTGATGGTTAGGAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR TCA 90 bp | AATTATAACACTGCCACTGTTCCAATCTTCTCTCGAGGAGCCCCTCCCCACCTCCGGCCACTCTTGGGGTaGATCAGCCTCCCAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NYNTATVPIFSRGAPPHLRPLLG*ISLPVI Trigger: GATCACTGGGAGGCTGATTCACCCCAAGAGTGGCCG...GAGGTGGGGAGGGGCTCCTCGAGAGAAGATTGGAACAGTGGCAGTGTTATAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR TCA 90 bp | CTAACCATCACCACCCACTCCTTTCACAGACTGGAAGGAGAGAGAGCCTTTAGACGGCCACTCTTGGGGTaGATCAGCCTCCCAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LTITTHSFHRLEGERAFRRPLLG*ISLPVI Trigger: GATCACTGGGAGGCTGATTCACCCCAAGAGTGGCCG...TCTAAAGGCTCTCTCTCCTTCCAGTCTGTGAAAGGAGTGGGTGGTGATGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCACCTTCCTAACCATCACCACCCACTCCTTTCACAGACTGGAAGGAGATTTCTCGTTGTCATCTaGCCTGCGGATCAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLHLPNHHHPLLSQTGRRFLVVI*PADQGL Trigger: GAGCCCCTGATCCGCAGGTCAGATGACAACGAGAAA...TCTCCTTCCAGTCTGTGAAAGGAGTGGGTGGTGATGGTTAGGAAGGTGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR TCA 90 bp | CACCTTCCTAACCATCACCACCCACTCCTTTCACAGACTGGAAGGAGAGAGAGCTCAGGGGCTCCCCAGTaGTATCATCTTTCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLPNHHHPLLSQTGRRESSGAPQ*YHLSWA Trigger: AGCCCATGAAAGATGATATCACTGGGGAGCCCCTGA...GCTCTCTCTCCTTCCAGTCTGTGAAAGGAGTGGGTGGTGATGGTTAGGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR GCA 90 bp | CTTCCCTGTAGAGGACTGAAGCCGGGGCTTTACAGAGCCAGGCACACACACGCCGAAGAAAGCCATTTTTaGACGAAGGAGTCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPCRGLKPGLYRARHTHAEESHF*TKESPN Trigger: ATTTGGAGACTCCTTCGTGCAAAAATGGCTTTCTTC...GGCGTGTGTGTGCCTGGCTCTGTAAAGCCCCGGCTTCAGTCCTCTACAGGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR CCA 90 bp | ACCTTCCTAACCATCACCACCCACTCCTTTCACAGACTGGAAGGAGAGAGAGCCCCAGGTCTTTACATGTaGCTTTGGAGAAGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLTITTHSFHRLEGERAPGLYM*LWRRLP Trigger: TGGCAGCCTTCTCCAAAGCCACATGTAAAGACCTGG...GGCTCTCTCTCCTTCCAGTCTGTGAAAGGAGTGGGTGGTGATGGTTAGGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR TCA 90 bp | CTAGGCCTTGTTCAGTTATCTAAAAGGGTCCCGTGGATGAATGAAGGCAAGGTTTCAGGGGCTCCCCAGTaGTATCATCTTTCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLVQLSKRVPWMNEGKVSGAPQ*YHLSWA Trigger: AGCCCATGAAAGATGATATCACTGGGGAGCCCCTGA...AACCTTGCCTTCATTCATCCACGGGACCCTTTTAGATAACTGAACAAGGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR GCA 90 bp | AAGATAACCTTGCTTTCTGAGAAAGGAAGTTCCCTCCACCTTCCTAACCATCACGAAGAAAGCCATTTTTaGACGAAGGAGTCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KITLLSEKGSSLHLPNHHEESHF*TKESPN Trigger: ATTTGGAGACTCCTTCGTGCAAAAATGGCTTTCTTC...GTGATGGTTAGGAAGGTGGAGGGAACTTCCTTTCTCAGAAAGCAAGGTTATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR CAA 90 bp | TCTTCCATCCGCGCAGGTCAGTCTTCTCGCTTTATGGAGTGGGGAGCCCCCGGCTTCAAGGCTTTCTCGTaGTCATCTGACCTGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SSIRAGQSSRFMEWGAPGFKAFS*SSDLRI Trigger: GATCCGCAGGTCAGATGACAACGAGAAAGCCTTGAA...GCCGGGGGCTCCCCACTCCATAAAGCGAGAAGACTGACCTGCGCGGATGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR CAA 90 bp | TCACAGTGTTGTCGGGCAATCCCAGTCCCAGGAGGTGAGGGGGACAATCCTTGGAGAAGAAAGCCATTTTaGCACGAAGGAGTCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQCCRAIPVPGGEGDNPWRRKPF*HEGVSK Trigger: TTTGGAGACTCCTTCGTGCAAAAATGGCTTTCTTCT...CCAAGGATTGTCCCCCTCACCTCCTGGGACTGGGATTGCCCGACAACACTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102604.11 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCACCTTCCTAACCATCACCACCCACTCCTTTCACAGACTGGAAGGAGAAGAAGAAAGCCATTTTaGCACGAAGGAGTCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLHLPNHHHPLLSQTGRRRRKPF*HEGVSK Trigger: TTTGGAGACTCCTTCGTGCAAAAATGGCTTTCTTCT...TCTCCTTCCAGTCTGTGAAAGGAGTGGGTGGTGATGGTTAGGAAGGTGGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||
| CDS-3UTR CAA 90 bp | AAGATAACCTTGCTTTCTGAGAAAGGAAGTTCCCTCCACCTTCCTAACCATCACTTCAAGGCTTTCTCGTaGTCATCTGACCTGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: KITLLSEKGSSLHLPNHHFKAFS*SSDLRI Trigger: GATCCGCAGGTCAGATGACAACGAGAAAGCCTTGAA...GTGATGGTTAGGAAGGTGGAGGGAACTTCCTTTCTCAGAAAGCAAGGTTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030583.13 |
||