Pregenerated sensors for AK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026817Ensembl transcript IDs: ENSMUST00000068271.5, ENSMUST00000113277.8, ENSMUST00000113278.9, ENSMUST00000156578.8, ENSMUST00000195721.6
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGCCAGACCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATaGAGCTCACTCTGTAGCGTGCTGGCCTCGTATACAGGGCCATGG | + |
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Preference number: 1 (lower is better) Translates to: HARPQSGTENLPSPG*SSLCSVLASYTGPW Trigger: CCATGGCCCTGTATACGAGGCCAGCACGCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR GCA 90 bp | CTTTGCCCTTTGCCCATGCCAGACCCCAGTCAGGCACAGAAAACCTaGCCAGCCCGGGATGCAGCTCACTCTGTAGCGTGCTGGCCTCGT | + |
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Preference number: 1 (lower is better) Translates to: LCPLPMPDPSQAQKT*PARDAAHSVACWPR Trigger: ACGAGGCCAGCACGCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATGGGCAAAGGGCAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR CCA 90 bp | CAGAGCAGCCTGCCAACCCAGGGACCCCTAGGCTTTGACACAGCCTaGCTAAGGAAGGGCCTAGGATCCCAGCAGAGCCAGAGGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: QSSLPTQGPLGFDTA*LRKGLGSQQSQRET Trigger: TGTCTCCCTCTGGCTCTGCTGGGATCCTAGGCCCTTCCTTAGCCAGGCTGTGTCAAAGCCTAGGGGTCCCTGGGTTGGCAGGCTGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR CCA 90 bp | AAACAGAAAGGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTaGGACAGCCATGGCTGCTGGCTTACAGGCTATCTGGGCTTACAG | + |
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Preference number: 1 (lower is better) Translates to: KQKGVSTVTPRGRCP*DSHGCWLTGYLGLQ Trigger: CTGTAAGCCCAGATAGCCTGTAAGCCAGCAGCCATGGCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCCTTTCTGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR GCA 90 bp | GTAGCGTGCTGGCCTCGTATACAGGGCCATGGGCTTGATTCCCAGTaGCCCCAAAACCAGGAGTGGTGGAGGTCCACACACACACCTGTA | + |
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Preference number: 1 (lower is better) Translates to: VACWPRIQGHGLDSQ*PQNQEWWRSTHTPV Trigger: TACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCCATGGCCCTGTATACGAGGCCAGCACGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR CCA 90 bp | CAGCTCTTCTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTaGTCCTTGATCCCACATCCTTGTCTATGGCAGCTCACACTCCTT | + |
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Preference number: 1 (lower is better) Translates to: QLFLASLGVLSGSQA*SLIPHPCLWQLTLL Trigger: AAGGAGTGTGAGCTGCCATAGACAAGGATGTGGGATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAGAAGAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR TCA 90 bp | TCTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTaGTCCCACATCCTTGTCTATGGCAGCTCACACTCCTTAATCTGC | + |
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Preference number: 1 (lower is better) Translates to: SWHPWVSSPGPRPGP*SHILVYGSSHSLIC Trigger: GCAGATTAAGGAGTGTGAGCTGCCATAGACAAGGATGTGGGATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR CCA 90 bp | CAGGGCCATGGGCTTGATTCCCAGTGCCCCCAAAACCAGGAGTGGTaGAGGTCCACACACACACCTGTAATCTCAGCACACAGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: QGHGLDSQCPQNQEW*RSTHTPVISAHRKT Trigger: TGTCTTCCTGTGTGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCCATGGCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR CCA 90 bp | GGCCACGCTGGGGCCTCCGGCTGTGGCAGCATGAATCACCATAACTaGAAGCAAAGGAAAGGAGCAATCCTAACCCTCCTTGGCAATTTC | + |
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Preference number: 1 (lower is better) Translates to: GHAGASGCGSMNHHN*KQRKGAILTLLGNF Trigger: GAAATTGCCAAGGAGGGTTAGGATTGCTCCTTTCCTTTGCTTCCAGTTATGGTGATTCATGCTGCCACAGCCGGAGGCCCCAGCGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR CCA 90 bp | ATACAGGGCCATGGGCTTGATTCCCAGTGCCCCCAAAACCAGGAGTaGTGGAGGTCCACACACACACCTGTAATCTCAGCACACAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: IQGHGLDSQCPQNQE*WRSTHTPVISAHRK Trigger: CTTCCTGTGTGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCCATGGCCCTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTGATCCCACAATGGGCCGGCCACGCTaGGGCCTCCGGCTGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LGIPGCPLRVPGLVLDPTMGRPR*GLRLWQ Trigger: CTGCCACAGCCGGAGGCCCCAGCGTGGCCGGCCCAT...TGTGGGATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAATGGGCCGGCCACGCTGGGGCCTCCGGCTGTGGCAGCATGAATCACCAAAGGGTGGGGCGGGCTaGGAGCTGGCCAAGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: GRMGRPRWGLRLWQHESPKGGAG*ELAKGS Trigger: GGATCCCTTGGCCAGCTCCCAGCCCGCCCCACCCTT...TGGTGATTCATGCTGCCACAGCCGGAGGCCCCAGCGTGGCCGGCCCATTCTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGACAGCTGGGCTGAGGCACAGGGAAGAATGGGCCGGCCACGCTGGGGCAAGGGTGGGGCGGGCTaGGAGCTGGCCAAGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: RQDSWAEAQGRMGRPRWGKGGAG*ELAKGS Trigger: GGATCCCTTGGCCAGCTCCCAGCCCGCCCCACCCTT...GCCCCAGCGTGGCCGGCCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTGATCCCACACTCCTTGGCACCCAGTaGCCACGTGGCCCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LGIPGCPLRVPGLVLDPTLLGTQ*PRGPSW Trigger: CCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAG...TGTGGGATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCGGGTCCCAGGCCTGGTCCTTGATCCCACATCCTTGTCTATGGCAGCTCACATGGGCCGGCCACGCTaGGGCCTCCGGCTGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRVPGLVLDPTSLSMAAHMGRPR*GLRLWQ Trigger: CTGCCACAGCCGGAGGCCCCAGCGTGGCCGGCCCAT...GTGAGCTGCCATAGACAAGGATGTGGGATCAAGGACCAGGCCTGGGACCCGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | CTTTGCCCATGCCAGACCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGTGGAGGTGCTGGGCTTaGGCCAGGCTGCCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LCPCQTPVRHRKPAQPGMWRCWA*ARLPGV Trigger: GACCCCAGGCAGCCTGGCTCAAGCCCAGCACCTCCA...CATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATGGGCAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | GTATGCCCATTGCACAGCTCCTTGGCACCCAGTGACCACGTGGCCCCAGCTGGTTGGAGGTGCTGGGCTTaGGCCAGGCTGCCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: VCPLHSSLAPSDHVAPAGWRCWA*ARLPGV Trigger: GACCCCAGGCAGCCTGGCTCAAGCCCAGCACCTCCA...ACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR CAA 90 bp | CTGACCCCAGCTTCCCACCTAGCTGTATGCCCATTGCACAGCTCCTaGGCACCCAGTGACCACGTGGCCCCAGCTGGTGAGCCCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: LTPASHLAVCPLHSS*APSDHVAPAGEPMA Trigger: GGCCATGGGCTCACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATACAGCTAGGTGGGAAGCTGGGGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | CCACCCCTGACCCCAGCTTCCCACCTAGCTGTATGCCCATTGCACAGCTCCTTGAAGGGTGGGGCGGGCTaGGAGCTGGCCAAGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: PPLTPASHLAVCPLHSSLKGGAG*ELAKGS Trigger: GGATCCCTTGGCCAGCTCCCAGCCCGCCCCACCCTT...CAAGGAGCTGTGCAATGGGCATACAGCTAGGTGGGAAGCTGGGGTCAGGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGAAGGCCACCCCTGACCCCAGCTTCCCACCTAGCTGTATGCCCATTGCACTCCTTGGCACCCAGTaGCCACGTGGCCCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FRKATPDPSFPPSCMPIALLGTQ*PRGPSW Trigger: CCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAG...TGCAATGGGCATACAGCTAGGTGGGAAGCTGGGGTCAGGGGTGGCCTTCCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | GTATGCCCATTGCACAGCTCCTTGGCACCCAGTGACCACGTGGCCCCAGCTGGTGGCTTCCTGTGTCTGTaGACAGCCCGGCAGGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VCPLHSSLAPSDHVAPAGGFLCL*TARQGG Trigger: TCCACCCTGCCGGGCTGTGCACAGACACAGGAAGCC...ACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | AGACAAGACAGCTGGGCTGAGGCACAGGGAAGAATGGGCCGGCCACGCTGGGGCCCGGCTGTGGCAGCATaGATCACCATAACTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RQDSWAEAQGRMGRPRWGPAVAA*ITITGS Trigger: GCTTCCAGTTATGGTGATTCATGCTGCCACAGCCGG...GCCCCAGCGTGGCCGGCCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | GTATGCCCATTGCACAGCTCCTTGGCACCCAGTGACCACGTGGCCCCAGCTGGTTGGCCCTTTGCCCTTTaGCCATGCCAGACCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VCPLHSSLAPSDHVAPAGWPFAL*PCQTPV Trigger: GACTGGGGTCTGGCATGGGCAAAGGGCAAAGGGCCA...ACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | GTATGCCCATTGCACAGCTCCTTGGCACCCAGTGACCACGTGGCCCCAGCTGGTACAAGACAGCTGGGCTaGGGCACAGGGAAGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: VCPLHSSLAPSDHVAPAGTRQLG*GTGKNG Trigger: CCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGT...ACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | GTATGCCCATTGCACAGCTCCTTGGCACCCAGTGACCACGTGGCCCCAGCTGGTACAGGGCCATGGGCTTaGTTCCCAGTGCCCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VCPLHSSLAPSDHVAPAGTGPWA*FPVPPK Trigger: TTTTGGGGGCACTGGGAATCAAGCCCATGGCCCTGT...ACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGCAGCTCACTCTGTAGCCCGGCTGTGGCAGCATaGATCACCATAACTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: PQSGTENLPSPGCSSLCSPAVAA*ITITGS Trigger: GCTTCCAGTTATGGTGATTCATGCTGCCACAGCCGG...GCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | CCACCCCTGACCCCAGCTTCCCACCTAGCTGTATGCCCATTGCACAGCTCCTTGGGGCTTGATTCCCAGTaGCCCCAAAACCAGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PPLTPASHLAVCPLHSSLGLDSQ*PQNQEW Trigger: CCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCC...CAAGGAGCTGTGCAATGGGCATACAGCTAGGTGGGAAGCTGGGGTCAGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAAAACCAGCCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTTGGAGGTGCTGGGCTTaGGCCAGGCTGCCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: FKTSQRMARPGRSIPREPWRCWA*ARLPGV Trigger: GACCCCAGGCAGCCTGGCTCAAGCCCAGCACCTCCA...AGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGGCTGGTTTTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | CTATGGCAGCTCACACTCCTTAATCTGCATGCTCTTGTCTTAACGCCGAGGATAATGGGCCGGCCACGCTaGGGCCTCCGGCTGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LWQLTLLNLHALVLTPRIMGRPR*GLRLWQ Trigger: CTGCCACAGCCGGAGGCCCCAGCGTGGCCGGCCCAT...TATCCTCGGCGTTAAGACAAGAGCATGCAGATTAAGGAGTGTGAGCTGCCATAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTTCTTCAGGAAGGAGCCCATGGCCCTTTaGCCTTTGCCCATGCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: PKDGKAWQVYTKGAFFRKEPMAL*PLPMPD Trigger: GTCTGGCATGGGCAAAGGGCAAAGGGCCATGGGCTC...CTTCCTGAAGAAGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTGATCTGGGACAGGATAACATaGCTTCCTGTGTCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LFLASLGVLSGSQAWSLIWDRIT*LPVSVH Trigger: GTGCACAGACACAGGAAGCCATGTTATCCTGTCCCA...GATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTTCTTCAGGAAGCAGCTGGTGAGCCCATaGCCCTTTGCCCTTTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PKDGKAWQVYTKGAFFRKQLVSP*PFALCP Trigger: TGGGCAAAGGGCAAAGGGCCATGGGCTCACCAGCTG...CTTCCTGAAGAAGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | TCCACACACACACCTGTAATCTCAGCACACAGGAAGACAAGTGGAGGCAGAAGGGGCTTCCTGTGTCTGTaGACAGCCCGGCAGGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: STHTPVISAHRKTSGGRRGFLCL*TARQGG Trigger: TCCACCCTGCCGGGCTGTGCACAGACACAGGAAGCC...CCTTCTGCCTCCACTTGTCTTCCTGTGTGCTGAGATTACAGGTGTGTGTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTTCTTCAGGAAGGGGCTTGATTCCCAGTaGCCCCAAAACCAGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PKDGKAWQVYTKGAFFRKGLDSQ*PQNQEW Trigger: CCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCC...CTTCCTGAAGAAGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTTCTTCAGGAAGTTTGCCCTTTGCCCATaGCAGACCCCAGTCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PKDGKAWQVYTKGAFFRKFALCP*QTPVRH Trigger: GTGCCTGACTGGGGTCTGGCATGGGCAAAGGGCAAA...CTTCCTGAAGAAGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGACAGCTGGGCTGAGGCACAGGGAAGAATGGGCCGGCCACGCTGGGGCATGAATCACCATAACTaGAAGCAAAGGAAAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RQDSWAEAQGRMGRPRWGMNHHN*KQRKGA Trigger: TGCTCCTTTCCTTTGCTTCCAGTTATGGTGATTCAT...GCCCCAGCGTGGCCGGCCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCCAAAACCAGGAGTGGTGGAGGTCCACACACACACCTGTAATCTCAGCAGGCTTTGACACAGCCTaGCTAAGGAAGGGCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: CPQNQEWWRSTHTPVISAGFDTA*LRKGLG Trigger: TCCTAGGCCCTTCCTTAGCCAGGCTGTGTCAAAGCC...TGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGAAGGCCACCCCTGACCCCAGCTTCCCACCTAGCTGTATGCCCATTGCAACTCCAGAGAGACAATaGCTTAGGGCCAAAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: FRKATPDPSFPPSCMPIATPERQ*LRAKAT Trigger: TGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGT...TGCAATGGGCATACAGCTAGGTGGGAAGCTGGGGTCAGGGGTGGCCTTCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAAACTCACTCCAGAGAGACAATGGCTTAGGGCCAAAGCCACACAACGAGGCACAAGACAGCTGGGCTaGGGCACAGGGAAGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: RKLTPERQWLRAKATQRGTRQLG*GTGKNG Trigger: CCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGT...GCCTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAGTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR GCA 90 bp | CTATGGCAGCTCACACTCCTTAATCTGCATGCTCTTGTCTTAACGCCGAGGATAGGCTTCCTGTGTCTGTaGACAGCCCGGCAGGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LWQLTLLNLHALVLTPRIGFLCL*TARQGG Trigger: TCCACCCTGCCGGGCTGTGCACAGACACAGGAAGCC...TATCCTCGGCGTTAAGACAAGAGCATGCAGATTAAGGAGTGTGAGCTGCCATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGGACATAGCGTGACAGGACAAGCTTTAAAACCAGCCAAAGGATGGCAAGGCACAGGGCCATGGGCTTaGTTCCCAGTGCCCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGHSVTGQALKPAKGWQGTGPWA*FPVPPK Trigger: TTTTGGGGGCACTGGGAATCAAGCCCATGGCCCTGT...GCCTTGCCATCCTTTGGCTGGTTTTAAAGCTTGTCCTGTCACGCTATGTCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAACCAGCCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTGGCTTTGACACAGCCTaGCTAAGGAAGGGCCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FKTSQRMARPGRSIPREPGFDTA*LRKGLG Trigger: TCCTAGGCCCTTCCTTAGCCAGGCTGTGTCAAAGCC...AGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGGCTGGTTTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAGAAAACTCACTCCAGAGAGACAATGGCTTAGGGCCAAAGCCACACAACGAGGGGACCCCTAGGCTTTaGCACAGCCTGGCTAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KENSLQRDNGLGPKPHNEGTPRL*HSLAKE Trigger: TTCCTTAGCCAGGCTGTGTCAAAGCCTAGGGGTCCC...CTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAGTTTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGACATAGCGTGACAGGACAAGCTTTAAAACCAGCCAAAGGATGGCAAGGCTGGGACAGGATAACATaGCTTCCTGTGTCTGTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGHSVTGQALKPAKGWQGWDRIT*LPVSVH Trigger: GTGCACAGACACAGGAAGCCATGTTATCCTGTCCCA...GCCTTGCCATCCTTTGGCTGGTTTTAAAGCTTGTCCTGTCACGCTATGTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTATTTTAAAGGACAGCTTAAATAGGCAATGCAGAAGGAAAGGTGGCCCCACTGAGCCCATGGCCCTTTaGCCTTTGCCCATGCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FILKDSLNRQCRRKGGPTEPMAL*PLPMPD Trigger: GTCTGGCATGGGCAAAGGGCAAAGGGCCATGGGCTC...AGTGGGGCCACCTTTCCTTCTGCATTGCCTATTTAAGCTGTCCTTTAAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGCAGAAGAGAGATGCCAGCTCTTCTTGGCATCCCTGGGTGTCCTCTCCGATGAATCACCATAACTaGAAGCAAAGGAAAGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KEQKRDASSSWHPWVSSPMNHHN*KQRKGA Trigger: TGCTCCTTTCCTTTGCTTCCAGTTATGGTGATTCAT...CGGAGAGGACACCCAGGGATGCCAAGAAGAGCTGGCATCTCTCTTCTGCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTTTAAAGGACAGCTTAAATAGGCAATGCAGAAGGAAAGGTGGCCCCACTGGGACCCCTAGGCTTTaGCACAGCCTGGCTAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: FILKDSLNRQCRRKGGPTGTPRL*HSLAKE Trigger: TTCCTTAGCCAGGCTGTGTCAAAGCCTAGGGGTCCC...AGTGGGGCCACCTTTCCTTCTGCATTGCCTATTTAAGCTGTCCTTTAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR CCA 90 bp | CTATGGCAGCTCACACTCCTTAATCTGCATGCTCTTGTCTTAACGCCGAGGATAATGAATCACCATAACTaGAAGCAAAGGAAAGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LWQLTLLNLHALVLTPRIMNHHN*KQRKGA Trigger: TGCTCCTTTCCTTTGCTTCCAGTTATGGTGATTCAT...TATCCTCGGCGTTAAGACAAGAGCATGCAGATTAAGGAGTGTGAGCTGCCATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | GGAGACAAGACAGCTGGGCTGAGGCACAGGGAAGAATaGGCCGGCCACGCTGGGGCCTCCGGCTGTGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GDKTAGLRHREE*AGHAGASGCGS Trigger: GCTGCCACAGCCGGAGGCCCCAGCGTGGCCGGCCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGTCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR TCA 72 bp | TCCCAGCAGAGCCAGAGGGAGACAAGACAGCTGGGCTaGGGCACAGGGAAGAATGGGCCGGCCACGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQQSQRETRQLG*GTGKNGPATLG Trigger: CCCCAGCGTGGCCGGCCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGTCTCCCTCTGGCTCTGCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR GCA 72 bp | GACCACGTGGCCCCAGCTGGTGAGCCCATGGCCCTTTaGCCTTTGCCCATGCCAGACCCCAGTCAGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: DHVAPAGEPMAL*PLPMPDPSQAQ Trigger: CTGTGCCTGACTGGGGTCTGGCATGGGCAAAGGGCAAAGGGCCATGGGCTCACCAGCTGGGGCCACGTGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | GCCCATTGCACAGCTCCTTGGCACCCAGTGACCACGTaGCCCCAGCTGGTGAGCCCATGGCCCTTTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AHCTAPWHPVTT*PQLVSPWPFAL Trigger: AAGGGCAAAGGGCCATGGGCTCACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | GGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTaGGACAGCCATGGCTGCTGGCTTACAGGCTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVSTVTPRGRCP*DSHGCWLTGYL Trigger: CAGATAGCCTGTAAGCCAGCAGCCATGGCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGAAAGGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTGGGACAGCATGGCCCTTTGCCCTTaGCCCATGCCAGACCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KQKGVSTVTPRGRCPWDSMALCP*PMPDPS Trigger: ACTGGGGTCTGGCATGGGCAAAGGGCAAAGGGCCAT...GCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCCTTTCTGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR TCA 72 bp | CCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTaGTCCCACATCCTTGTCTATGGCAGCTCACACTCC | + |
|
Preference number: 3 (lower is better) Translates to: PWVSSPGPRPGP*SHILVYGSSHS Trigger: GGAGTGTGAGCTGCCATAGACAAGGATGTGGGATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR GCA 72 bp | ACCTGCCCAGCCCGGGATGCAGCTCACTCTGTAGCGTaGTGGCCTCGTATACAGGGCCATGGGCTTGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TCPARDAAHSVA*WPRIQGHGLDS Trigger: GGAATCAAGCCCATGGCCCTGTATACGAGGCCAGCACGCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR GCA 72 bp | TTGCCCATGCCAGACCCCAGTCAGGCACAGAAAACCTaGCCAGCCCGGGATGCAGCTCACTCTGTAGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPMPDPSQAQKT*PARDAAHSVAC Trigger: GCACGCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATGGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR GCA 72 bp | AGGCCACCCCTGACCCCAGCTTCCCACCTAGCTGTATaGCCATTGCACAGCTCCTTGGCACCCAGTGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: RPPLTPASHLAV*PLHSSLAPSDH Trigger: GTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATACAGCTAGGTGGGAAGCTGGGGTCAGGGGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | CTGCCAACCCAGGGACCCCTAGGCTTTGACACAGCCTaGCTAAGGAAGGGCCTAGGATCCCAGCAGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPTQGPLGFDTA*LRKGLGSQQSQ Trigger: CTGGCTCTGCTGGGATCCTAGGCCCTTCCTTAGCCAGGCTGTGTCAAAGCCTAGGGGTCCCTGGGTTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | TGCCCAGCCCGGGATGCAGCTCACTCTGTAGCGTGCTaGCCTCGTATACAGGGCCATGGGCTTGATTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CPARDAAHSVAC*PRIQGHGLDSQ Trigger: CTGGGAATCAAGCCCATGGCCCTGTATACGAGGCCAGCACGCTACAGAGTGAGCTGCATCCCGGGCTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | CCCAGGGGCAGGTGTCCCTGGGACAGCCATGGCTGCTaGCTTACAGGCTATCTGGGCTTACAGGGGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PRGRCPWDSHGC*LTGYLGLQGKS Trigger: TGACTTCCCCTGTAAGCCCAGATAGCCTGTAAGCCAGCAGCCATGGCTGTCCCAGGGACACCTGCCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGAAAGGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTGGGACAGCCTAGCTGTATGCCCATaGCACAGCTCCTTGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: KQKGVSTVTPRGRCPWDSLAVCP*HSSLAP Trigger: GGGTGCCAAGGAGCTGTGCAATGGGCATACAGCTAG...GCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCCTTTCTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGAAAGGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTGGGACAGCAGATGCCAGCTCTTCTaGGCATCCCTGGGTGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KQKGVSTVTPRGRCPWDSRCQLF*ASLGVL Trigger: GAGGACACCCAGGGATGCCAAGAAGAGCTGGCATCT...GCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCCTTTCTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR GCA 72 bp | CCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATaGAGCTCACTCTGTAGCGTGCTGGCCTCGTATACA | + |
|
Preference number: 3 (lower is better) Translates to: PQSGTENLPSPG*SSLCSVLASYT Trigger: TGTATACGAGGCCAGCACGCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | TTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTaGTCCTTGATCCCACATCCTTGTCTATGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LASLGVLSGSQA*SLIPHPCLWQL Trigger: GAGCTGCCATAGACAAGGATGTGGGATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR GCA 72 bp | TGGCCTCGTATACAGGGCCATGGGCTTGATTCCCAGTaGCCCCAAAACCAGGAGTGGTGGAGGTCCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: WPRIQGHGLDSQ*PQNQEWWRSTH Trigger: GTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCCATGGCCCTGTATACGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | GGGCTTGATTCCCAGTGCCCCCAAAACCAGGAGTGGTaGAGGTCCACACACACACCTGTAATCTCAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GLDSQCPQNQEW*RSTHTPVISAH Trigger: GTGTGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | CATGGGCTTGATTCCCAGTGCCCCCAAAACCAGGAGTaGTGGAGGTCCACACACACACCTGTAATCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HGLDSQCPQNQE*WRSTHTPVISA Trigger: TGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCACTGGGAATCAAGCCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGACATAGCGTGACAGGACAAGCTTTAAAACCAGCCAAAGGATGGCAAGGCCCATTGCACAGCTCCTaGGCACCCAGTGACCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGHSVTGQALKPAKGWQGPLHSS*APSDHV Trigger: CACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGG...GCCTTGCCATCCTTTGGCTGGTTTTAAAGCTTGTCCTGTCACGCTATGTCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR TCA 72 bp | AAGTCACTAGGGATGGAGACGGGGCCCCAGGACAAGTaGGTACCAACAGAGGCTTCCTGTGTAATGAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: KSLGMETGPQDK*VPTEASCVMRP Trigger: TGGTCTCATTACACAGGAAGCCTCTGTTGGTACTCACTTGTCCTGGGGCCCCGTCTCCATCCCTAGTGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR CCA 72 bp | GGGGCCTCCGGCTGTGGCAGCATGAATCACCATAACTaGAAGCAAAGGAAAGGAGCAATCCTAACCCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GASGCGSMNHHN*KQRKGAILTLL Trigger: AAGGAGGGTTAGGATTGCTCCTTTCCTTTGCTTCCAGTTATGGTGATTCATGCTGCCACAGCCGGAGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| 3UTR-3UTR CAA 90 bp | CTATGGCAGCTCACACTCCTTAATCTGCATGCTCTTGTCTTAACGCCGAGGATACCATTGCACAGCTCCTaGGCACCCAGTGACCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LWQLTLLNLHALVLTPRIPLHSS*APSDHV Trigger: CACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGG...TATCCTCGGCGTTAAGACAAGAGCATGCAGATTAAGGAGTGTGAGCTGCCATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| 3UTR GCA 72 bp | CATTTATTTATTTTAAAGGACAGCTTAAATAGGCAATaGAGAAGGAAAGGTGGCCCCACTGGTAGTAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: HLFILKDSLNRQ*RRKGGPTGSKQ Trigger: CTGTTTACTACCAGTGGGGCCACCTTTCCTTCTGCATTGCCTATTTAAGCTGTCCTTTAAAATAAATAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCATGCCAGACCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGCAGGGAGTCGTTGGGTCATaGTCTCGGCGCCTGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPCQTPVRHRKPAQPGMQGVVGS*SRRLRP Trigger: TGGACGCAGGCGCCGAGACCATGACCCAACGACTCC...CTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | AGACAAGACAGCTGGGCTGAGGCACAGGGAAGAATGGGCCGGCCACGCTGGGGCTCTTCTCGCACTGGGTaGCCTTTCCTGAGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQDSWAEAQGRMGRPRWGSSRTG*PFLSQV Trigger: GACCTGGCTCAGGAAAGGGCACCCAGTGCGAGAAGA...GCCCCAGCGTGGCCGGCCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR CCA 90 bp | GTATGCCCATTGCACAGCTCCTTGGCACCCAGTGACCACGTGGCCCCAGCTGGTGGAGTCGTTGGGTCATaGTCTCGGCGCCTGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCPLHSSLAPSDHVAPAGGVVGS*SRRLRP Trigger: TGGACGCAGGCGCCGAGACCATGACCCAACGACTCC...ACCAGCTGGGGCCACGTGGTCACTGGGTGCCAAGGAGCTGTGCAATGGGCATAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGCCCATGCCAGACCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGCATGGTCTCGGCGCCTaGGTCCACATACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCPCQTPVRHRKPAQPGMHGLGA*VHIQQQ Trigger: CTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATG...CATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATGGGCAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTGATCCATGGTCTCGGCGCCTaGGTCCACATACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLASLGVLSGSQAWSLIHGLGA*VHIQQQ Trigger: CTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATG...GATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAGAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGCCCATGCCAGACCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGTCTTCTCGCACTGGGTaGCCTTTCCTGAGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCPCQTPVRHRKPAQPGMSSRTG*PFLSQV Trigger: GACCTGGCTCAGGAAAGGGCACCCAGTGCGAGAAGA...CATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATGGGCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | AAACAGAAAGGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTGGGACAGCTCCAGAGCTGACTTCTaGCCGAAGCAGGTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQKGVSTVTPRGRCPWDSSRADF*PKQVPS Trigger: ACTGGGGACCTGCTTCGGGCAGAAGTCAGCTCTGGA...GCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCCTTTCTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAATGGGCCGGCCACGCTGGGGCCTCCGGCTGTGGCAGCATGAATCACCACTGCCTCCCTCTTCTTaGGGTTCACTAGACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRMGRPRWGLRLWQHESPLPPSS*GSLDTQ Trigger: CTGTGTGTCTAGTGAACCCCAAGAAGAGGGAGGCAG...TGGTGATTCATGCTGCCACAGCCGGAGGCCCCAGCGTGGCCGGCCCATTCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068271.5 |
||
| CDS-3UTR GCA 90 bp | CTCCGGGTCCCAGGCCTGGTCCTTGATCCCACATCCTTGTCTATGGCAGCTCACTCTTCTCGCACTGGGTaGCCTTTCCTGAGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVPGLVLDPTSLSMAAHSSRTG*PFLSQV Trigger: GACCTGGCTCAGGAAAGGGCACCCAGTGCGAGAAGA...GTGAGCTGCCATAGACAAGGATGTGGGATCAAGGACCAGGCCTGGGACCCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | AGACAAGACAGCTGGGCTGAGGCACAGGGAAGAATGGGCCGGCCACGCTGGGGCGGGAGTCAAGATAGGTaGAGACCTCAGAGAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RQDSWAEAQGRMGRPRWGGSQDR*RPQRRQ Trigger: CTGTCTTCTCTGAGGTCTGCACCTATCTTGACTCCC...GCCCCAGCGTGGCCGGCCCATTCTTCCCTGTGCCTCAGCCCAGCTGTCTTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | AAACAGAAAGGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTGGGACAGCCGCCCACCACAAAGATaGTCTTGGCCTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQKGVSTVTPRGRCPWDSRPPQR*SWPSSA Trigger: AGCTGAAGAAGGCCAAGATCATCTTTGTGGTGGGCG...GCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCCTTTCTGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | TTTAAAACCAGCCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTCTGGGTGCCCTTTCCTaGGCCAGGTCCGCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKTSQRMARPGRSIPREPLGALS*ARSAHH Trigger: GTGGTGGGCGGACCTGGCTCAGGAAAGGGCACCCAG...AGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGGCTGGTTTTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | TTGGGACATAGCGTGACAGGACAAGCTTTAAAACCAGCCAAAGGATGGCAAGGCCTGGGTGCCCTTTCCTaGGCCAGGTCCGCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGHSVTGQALKPAKGWQGLGALS*ARSAHH Trigger: GTGGTGGGCGGACCTGGCTCAGGAAAGGGCACCCAG...GCCTTGCCATCCTTTGGCTGGTTTTAAAGCTTGTCCTGTCACGCTATGTCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTGATCGGGAGTCAAGATAGGTaGAGACCTCAGAGAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLASLGVLSGSQAWSLIGSQDR*RPQRRQ Trigger: CTGTCTTCTCTGAGGTCTGCACCTATCTTGACTCCC...GATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGCATCCCTGGGTGTCCTCTCCGGGTCCCAGGCCTGGTCCTTGATCCCACATGTCATAGAAGGAGATaGCAGGTTCTGTGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGIPGCPLRVPGLVLDPTCHRRR*QVLWHC Trigger: ACAATGCCACAGAACCTGTCATCTCCTTCTATGACA...TGTGGGATCAAGGACCAGGCCTGGGACCCGGAGAGGACACCCAGGGATGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR CCA 90 bp | TCCACACACACACCTGTAATCTCAGCACACAGGAAGACAAGTGGAGGCAGAAGGGGAGTCGTTGGGTCATaGTCTCGGCGCCTGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STHTPVISAHRKTSGGRRGVVGS*SRRLRP Trigger: TGGACGCAGGCGCCGAGACCATGACCCAACGACTCC...CCTTCTGCCTCCACTTGTCTTCCTGTGTGCTGAGATTACAGGTGTGTGTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGCAGCTCACTCTGTAGCTGTCATAGAAGGAGATaGCAGGTTCTGTGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQSGTENLPSPGCSSLCSCHRRR*QVLWHC Trigger: ACAATGCCACAGAACCTGTCATCTCCTTCTATGACA...GCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAAGGCCACCCCTGACCCCAGCTTCCCACCTAGCTGTATGCCCATTGCATCTCTCCAGTCTTTCTaGCTCCCTCTTCTTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRKATPDPSFPPSCMPIASLQSF*LPLLGV Trigger: AACCCCAAGAAGAGGGAGGCAGAAAGACTGGAGAGA...TGCAATGGGCATACAGCTAGGTGGGAAGCTGGGGTCAGGGGTGGCCTTCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068271.5 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGCAGCTCACTCTGTAGCCGATCAGGAAGCCATTaGAAGAATCCACTTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PQSGTENLPSPGCSSLCSRSGSH*KNPLWL Trigger: TAGCCAAAGTGGATTCTTCCAATGGCTTCCTGATCG...GCTACAGAGTGAGCTGCATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCCATGCCAGACCCCAGTCAGGCACAGAAAACCTGCCCAGCCCGGGATGCGATCAGGAAGCCATTaGAAGAATCCACTTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCPCQTPVRHRKPAQPGMRSGSH*KNPLWL Trigger: TAGCCAAAGTGGATTCTTCCAATGGCTTCCTGATCG...CATCCCGGGCTGGGCAGGTTTTCTGTGCCTGACTGGGGTCTGGCATGGGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | CTCACTCCAGAGAGACAATGGCTTAGGGCCAAAGCCACACAACGAGGCTATGAGCGCCCACCACAAAGATaGTCTTGGCCTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPERQWLRAKATQRGYERPPQR*SWPSSA Trigger: AGCTGAAGAAGGCCAAGATCATCTTTGTGGTGGGCG...CTCATAGCCTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | CTATGGCAGCTCACACTCCTTAATCTGCATGCTCTTGTCTTAACGCCGAGGATACATGGTCTCGGCGCCTaGGTCCACATACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWQLTLLNLHALVLTPRIHGLGA*VHIQQQ Trigger: CTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATG...TATCCTCGGCGTTAAGACAAGAGCATGCAGATTAAGGAGTGTGAGCTGCCATAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCCCAAAACCAGGAGTGGTGGAGGTCCACACACACACCTGTAATCTCAGCAGGGAGTCAAGATAGGTaGAGACCTCAGAGAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPQNQEWWRSTHTPVISAGSQDR*RPQRRQ Trigger: CTGTCTTCTCTGAGGTCTGCACCTATCTTGACTCCC...TGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | TTTAAAACCAGCCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTTCTCCAGCCGCTTCTTaGTGGTCTCCTCGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKTSQRMARPGRSIPREPSPAAS*WSPRCH Trigger: ATGACAACGAGGAGACCATCAAGAAGCGGCTGGAGA...AGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGGCTGGTTTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | TCCACACACACACCTGTAATCTCAGCACACAGGAAGACAAGTGGAGGCAGAAGGTCTCCAGCCGCTTCTTaGTGGTCTCCTCGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STHTPVISAHRKTSGGRRSPAAS*WSPRCH Trigger: ATGACAACGAGGAGACCATCAAGAAGCGGCTGGAGA...CCTTCTGCCTCCACTTGTCTTCCTGTGTGCTGAGATTACAGGTGTGTGTGTGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCCCAAAACCAGGAGTGGTGGAGGTCCACACACACACCTGTAATCTCAGCATGTCATAGAAGGAGATaGCAGGTTCTGTGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPQNQEWWRSTHTPVISACHRRR*QVLWHC Trigger: ACAATGCCACAGAACCTGTCATCTCCTTCTATGACA...TGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR TCA 90 bp | AAAGAAAACTCACTCCAGAGAGACAATGGCTTAGGGCCAAAGCCACACAACGAGCGCCCACCACAAAGATaGTCTTGGCCTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KENSLQRDNGLGPKPHNERPPQR*SWPSSA Trigger: AGCTGAAGAAGGCCAAGATCATCTTTGTGGTGGGCG...CTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAGTTTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR TCA 90 bp | CTATGGCAGCTCACACTCCTTAATCTGCATGCTCTTGTCTTAACGCCGAGGATATCTCCAGCCGCTTCTTaGTGGTCTCCTCGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWQLTLLNLHALVLTPRISPAAS*WSPRCH Trigger: ATGACAACGAGGAGACCATCAAGAAGCGGCTGGAGA...TATCCTCGGCGTTAAGACAAGAGCATGCAGATTAAGGAGTGTGAGCTGCCATAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CCA 90 bp | AAAGAAAACTCACTCCAGAGAGACAATGGCTTAGGGCCAAAGCCACACAACGAGCGATCAGGAAGCCATTaGAAGAATCCACTTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KENSLQRDNGLGPKPHNERSGSH*KNPLWL Trigger: TAGCCAAAGTGGATTCTTCCAATGGCTTCCTGATCG...CTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAGTTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTAAAGGACAGCTTAAATAGGCAATGCAGAAGGAAAGGTGGCCCCACTCATACAGCAGCAGTGTaGGCTGTCCAATCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FILKDSLNRQCRRKGGPTHTAAV*AVQSSV Trigger: AACAGAAGATTGGACAGCCCACACTGCTGCTGTATG...AGTGGGGCCACCTTTCCTTCTGCATTGCCTATTTAAGCTGTCCTTTAAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS CCA 90 bp | CCACGCGGCCACTGGTCTCCCCTCGCTTCAGGAGTCGTTGGGTCATaGTCTCGGCGCCTGCGTCCACATACAGCAGCAGTGTGGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRGHWSPLASGVVGS*SRRLRPHTAAVWAV Trigger: GACAGCCCACACTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATGACCCAACGACTCCTGAAGCGAGGGGAGACCAGTGGCCGCGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS CCA 90 bp | TTGTCATCCACGCGGCCACTGGTCTCCCCTCGCTTCAGGAGTCGTTaGGTCATGGTCTCGGCGCCTGCGTCCACATACAGCAGCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSTRPLVSPRFRSR*VMVSAPASTYSSSV Trigger: CACACTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATGACCCAACGACTCCTGAAGCGAGGGGAGACCAGTGGCCGCGTGGATGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | AAACAGAAAGGAGTGAGCACCGTCACCCCCAGGGGCAGGTGTCCCTGGGACAGCATAGCCGACAGCTTCTaGCCCCTCTCCGATCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KQKGVSTVTPRGRCPWDSIADSF*PLSDPE Trigger: CTCTGGATCGGAGAGGGGCAAGAAGCTGTCGGCTAT...GCTGTCCCAGGGACACCTGCCCCTGGGGGTGACGGTGCTCACTCCTTTCTGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | AGCCTGCCAACCCAGGGACCCCTAGGCTTTGACACAGCCTGGCTAAGGAAGGGCGTCTCCAGCCGCTTCTaGATGGTCTCCTCGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPTQGPLGFDTAWLRKGVSSRF*MVSSLS Trigger: TGACAACGAGGAGACCATCAAGAAGCGGCTGGAGAC...GCCCTTCCTTAGCCAGGCTGTGTCAAAGCCTAGGGGTCCCTGGGTTGGCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | CTCCGGGTCCCAGGCCTGGTCCTTGATCCCACATCCTTGTCTATGGCAGCTCACGTCTCCAGCCGCTTCTaGATGGTCTCCTCGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRVPGLVLDPTSLSMAAHVSSRF*MVSSLS Trigger: TGACAACGAGGAGACCATCAAGAAGCGGCTGGAGAC...GTGAGCTGCCATAGACAAGGATGTGGGATCAAGGACCAGGCCTGGGACCCGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | CCAAAGGATGGCAAGGCCTGGCAGGTCTATACCAAGGGAGCCTTCTTCAGGAAGTTGATGGTCTCCTCGTaGTCATCCACGCGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PKDGKAWQVYTKGAFFRKLMVSS*SSTRPL Trigger: CAGTGGCCGCGTGGATGACAACGAGGAGACCATCAA...CTTCCTGAAGAAGGCTCCCTTGGTATAGACCTGCCAGGCCTTGCCATCCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | CTCACTCCAGAGAGACAATGGCTTAGGGCCAAAGCCACACAACGAGGCTATGAGATAGCCGACAGCTTCTaGCCCCTCTCCGATCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTPERQWLRAKATQRGYEIADSF*PLSDPE Trigger: CTCTGGATCGGAGAGGGGCAAGAAGCTGTCGGCTAT...CTCATAGCCTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | TCCGGCTGTGGCAGCATGAATCACCATAACTGGAAGCAAAGGAAAGGAGCAATCTTGATGGTCTCCTCGTaGTCATCCACGCGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGCGSMNHHNWKQRKGAILMVSS*SSTRPL Trigger: CAGTGGCCGCGTGGATGACAACGAGGAGACCATCAA...GATTGCTCCTTTCCTTTGCTTCCAGTTATGGTGATTCATGCTGCCACAGCCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | AAAGAAAACTCACTCCAGAGAGACAATGGCTTAGGGCCAAAGCCACACAACGAGATAGCCGACAGCTTCTaGCCCCTCTCCGATCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KENSLQRDNGLGPKPHNEIADSF*PLSDPE Trigger: CTCTGGATCGGAGAGGGGCAAGAAGCTGTCGGCTAT...CTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAGTTTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | TGCCCCCAAAACCAGGAGTGGTGGAGGTCCACACACACACCTGTAATCTCAGCATCGATCAGGAAGCCATaGGAAGAATCCACTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPQNQEWWRSTHTPVISASIRKP*EESTLA Trigger: AGCCAAAGTGGATTCTTCCAATGGCTTCCTGATCGA...TGCTGAGATTACAGGTGTGTGTGTGGACCTCCACCACTCCTGGTTTTGGGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | AAAGAGCAGAAGAGAGATGCCAGCTCTTCTTGGCATCCCTGGGTGTCCTCTCCGTTGGAAGAATCCACTTaGGCTAACATAGCATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KEQKRDASSSWHPWVSSPLEEST*ANIASR Trigger: CCGAGATGCTATGTTAGCCAAAGTGGATTCTTCCAA...CGGAGAGGACACCCAGGGATGCCAAGAAGAGCTGGCATCTCTCTTCTGCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | TCCACACACACACCTGTAATCTCAGCACACAGGAAGACAAGTGGAGGCAGAAGGTCGATCAGGAAGCCATaGGAAGAATCCACTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STHTPVISAHRKTSGGRRSIRKP*EESTLA Trigger: AGCCAAAGTGGATTCTTCCAATGGCTTCCTGATCGA...CCTTCTGCCTCCACTTGTCTTCCTGTGTGCTGAGATTACAGGTGTGTGTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS-3UTR CAA 90 bp | TCCACACACACACCTGTAATCTCAGCACACAGGAAGACAAGTGGAGGCAGAAGGTTGGAAGAATCCACTTaGGCTAACATAGCATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: STHTPVISAHRKTSGGRRLEEST*ANIASR Trigger: CCGAGATGCTATGTTAGCCAAAGTGGATTCTTCCAA...CCTTCTGCCTCCACTTGTCTTCCTGTGTGCTGAGATTACAGGTGTGTGTGTGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | CTATGGCAGCTCACACTCCTTAATCTGCATGCTCTTGTCTTAACGCCGAGGATATCGATCAGGAAGCCATaGGAAGAATCCACTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWQLTLLNLHALVLTPRISIRKP*EESTLA Trigger: AGCCAAAGTGGATTCTTCCAATGGCTTCCTGATCGA...TATCCTCGGCGTTAAGACAAGAGCATGCAGATTAAGGAGTGTGAGCTGCCATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | TTTATTTTAAAGGACAGCTTAAATAGGCAATGCAGAAGGAAAGGTGGCCCCACTTTGATGGTCTCCTCGTaGTCATCCACGCGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FILKDSLNRQCRRKGGPTLMVSS*SSTRPL Trigger: CAGTGGCCGCGTGGATGACAACGAGGAGACCATCAA...AGTGGGGCCACCTTTCCTTCTGCATTGCCTATTTAAGCTGTCCTTTAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS-3UTR CAA 90 bp | TTTATTTTAAAGGACAGCTTAAATAGGCAATGCAGAAGGAAAGGTGGCCCCACTGTCTCCAGCCGCTTCTaGATGGTCTCCTCGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FILKDSLNRQCRRKGGPTVSSRF*MVSSLS Trigger: TGACAACGAGGAGACCATCAAGAAGCGGCTGGAGAC...AGTGGGGCCACCTTTCCTTCTGCATTGCCTATTTAAGCTGTCCTTTAAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS CCA 72 bp | ACGCGGCCACTGGTCTCCCCTCGCTTCAGGAGTCGTTaGGTCATGGTCTCGGCGCCTGCGTCCACATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRPLVSPRFRSR*VMVSAPASTYS Trigger: GCTGTATGTGGACGCAGGCGCCGAGACCATGACCCAACGACTCCTGAAGCGAGGGGAGACCAGTGGCCGCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS CAA 72 bp | CACGCGGCCACTGGTCTCCCCTCGCTTCAGGAGTCGTaGGGTCATGGTCTCGGCGCCTGCGTCCACATACAG | + |
|
Preference number: 6 (lower is better) Translates to: HAATGLPSLQES*GHGLGACVHIQ Trigger: CTGTATGTGGACGCAGGCGCCGAGACCATGACCCAACGACTCCTGAAGCGAGGGGAGACCAGTGGCCGCGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS CAA 90 bp | GTTGTCATCCACGCGGCCACTGGTCTCCCCTCGCTTCAGGAGTCGTaGGGTCATGGTCTCGGCGCCTGCGTCCACATACAGCAGCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VVIHAATGLPSLQES*GHGLGACVHIQQQC Trigger: ACACTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATGACCCAACGACTCCTGAAGCGAGGGGAGACCAGTGGCCGCGTGGATGACAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS CCA 72 bp | CACTGGTCTCCCCTCGCTTCAGGAGTCGTTGGGTCATaGTCTCGGCGCCTGCGTCCACATACAGCAGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HWSPLASGVVGS*SRRLRPHTAAV Trigger: CACTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATGACCCAACGACTCCTGAAGCGAGGGGAGACCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS GCA 72 bp | CAGCTTCTTGCCCCTCTCCGATCCAGAGCTGACTTCTaGCCGAAGCAGGTCCCCAGTAGACAGGTGGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: QLLAPLRSRADF*PKQVPSRQVGV Trigger: TACACCCACCTGTCTACTGGGGACCTGCTTCGGGCAGAAGTCAGCTCTGGATCGGAGAGGGGCAAGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 ENSMUST00000156578.8 ENSMUST00000195721.6 |
||
| CDS GCA 72 bp | TCGCTTCAGGAGTCGTTGGGTCATGGTCTCGGCGCCTaGGTCCACATACAGCAGCAGTGTGGGCTGTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SLQESLGHGLGA*VHIQQQCGLSN Trigger: ATTGGACAGCCCACACTGCTGCTGTATGTGGACGCAGGCGCCGAGACCATGACCCAACGACTCCTGAAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
||
| CDS CAA 90 bp | TCCAGTGGCACTAGCTCTCCCTTCTCCATGATAGCCGACAGCTTCTaGCCCCTCTCCGATCCAGAGCTGACTTCTGCCCGAAGCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGTSSPFSMIADSF*PLSDPELTSARSRS Trigger: GGACCTGCTTCGGGCAGAAGTCAGCTCTGGATCGGAGAGGGGCAAGAAGCTGTCGGCTATCATGGAGAAGGGAGAGCTAGTGCCACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 ENSMUST00000156578.8 ENSMUST00000195721.6 |
||
| CDS CAA 72 bp | ACTAGCTCTCCCTTCTCCATGATAGCCGACAGCTTCTaGCCCCTCTCCGATCCAGAGCTGACTTCTGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TSSPFSMIADSF*PLSDPELTSAR Trigger: TCGGGCAGAAGTCAGCTCTGGATCGGAGAGGGGCAAGAAGCTGTCGGCTATCATGGAGAAGGGAGAGCTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 ENSMUST00000156578.8 ENSMUST00000195721.6 |
||
| CDS TCA 72 bp | CCTCAGAGAAGACAGTGTCCACCGTGCCTTCGGCATTaGCCTTGCGCACAATGCCACGCTTGTCATAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PQRRQCPPCLRH*PCAQCHACHRR Trigger: CCTTCTATGACAAGCGTGGCATTGTGCGCAAGGTCAATGCCGAAGGCACGGTGGACACTGTCTTCTCTGAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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| CDS TCA 72 bp | TTTCTGTACAATCTTCTCGCACTGGGTGCCCTTTCCTaGGCCAGGTCCGCCCACCACAAAGATGATCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FLYNLLALGALS*ARSAHHKDDLG Trigger: GCCAAGATCATCTTTGTGGTGGGCGGACCTGGCTCAGGAAAGGGCACCCAGTGCGAGAAGATTGTACAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 ENSMUST00000156578.8 |
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| CDS GCA 72 bp | TGTAGCCATATTTCTGTACAATCTTCTCGCACTGGGTaGCCTTTCCTGAGCCAGGTCCGCCCACCACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: CSHISVQSSRTG*PFLSQVRPPQR Trigger: TCTTTGTGGTGGGCGGACCTGGCTCAGGAAAGGGCACCCAGTGCGAGAAGATTGTACAGAAATATGGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 ENSMUST00000156578.8 |
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| CDS TCA 72 bp | CCTTGCGCACAATGCCACGCTTGTCATAGAAGGAGATaGCAGGTTCTGTGGCATTGTAATAAGTCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PCAQCHACHRRR*QVLWHCNKSPA Trigger: GGCTGGAGACTTATTACAATGCCACAGAACCTGTCATCTCCTTCTATGACAAGCGTGGCATTGTGCGCAAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068271.5 ENSMUST00000113277.8 ENSMUST00000113278.9 |
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