Pregenerated sensors for AJAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039546Ensembl transcript IDs: ENSMUST00000105646.3, ENSMUST00000149177.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGTTCGGTTTCCGTTGAATGTGGACTTGTACTCCCCGGTCGAGTaGAGCGTCTCGTCGGCATACACGGGCACAGAGGCCCTGACACAC | + |
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Preference number: 1 (lower is better) Translates to: DVRFPLNVDLYSPVE*SVSSAYTGTEALTH Trigger: GTGTGTCAGGGCCTCTGTGCCCGTGTATGCCGACGAGACGCTGCACTCGACCGGGGAGTACAAGTCCACATTCAACGGAAACCGAACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR CCA 90 bp | GTGCGAGTCCCAGGCGTCGGGAGCTGTCTCCTGTCCTTCTCTGCATaGCATTCTCTGCCGTCTCCAGTCCGCTTCTTGCGTGTCTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: VRVPGVGSCLLSFSA*HSLPSPVRFLRVFF Trigger: AAAGAAGACACGCAAGAAGCGGACTGGAGACGGCAGAGAATGCCATGCAGAGAAGGACAGGAGACAGCTCCCGACGCCTGGGACTCGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 90 bp | GATCCCCACCCCTGTCCTCTGTTAAGATCTCTCCACGTGGTTCGCTaGGCTCGGCTCCTGCCGAGCTTCCGGGTCATTACATGGCACATA | + |
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Preference number: 1 (lower is better) Translates to: DPHPCPLLRSLHVVR*ARLLPSFRVITWHI Trigger: TATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAGCCGAGCCCAGCGAACCACGTGGAGAGATCTTAACAGAGGACAGGGGTGGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 90 bp | GTGGTTCGCTGGGCTCGGCTCCTGCCGAGCTTCCGGGTCATTACATaGCACATAGTGGTATTATTGGCACAGGTTCAGAATCGTGGTGCG | + |
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Preference number: 1 (lower is better) Translates to: VVRWARLLPSFRVIT*HIVVLLAQVQNRGA Trigger: CGCACCACGATTCTGAACCTGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAGCCGAGCCCAGCGAACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 90 bp | TGCTTGTATGACACAAATGTTCGAGAATCTGCCACCCACCCAACCTaGTTCTCAGGCTCACTCGTTGGCAGTCGGCTGCGTGAGCGCGTG | + |
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Preference number: 1 (lower is better) Translates to: CLYDTNVRESATHPT*FSGSLVGSRLRERV Trigger: CACGCGCTCACGCAGCCGACTGCCAACGAGTGAGCCTGAGAACCAGGTTGGGTGGGTGGCAGATTCTCGAACATTTGTGTCATACAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR TCA 90 bp | AGCAATTTTACAAAAATAGATTTGGCCTTGGGTGTCCTGCTCAGCTaGGTTCCCGCGGGCAAACAGAAGCAGCGGGTGCGGGACCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SNFTKIDLALGVLLS*VPAGKQKQRVRDPP Trigger: GGGAGGGTCCCGCACCCGCTGCTTCTGTTTGCCCGCGGGAACTCAGCTGAGCAGGACACCCAAGGCCAAATCTATTTTTGTAAAATTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR TCA 90 bp | TGTCTGACGGATGGAAGTTGTCACGTAAGGGCTCGTCCTCTGGGTTaGGGCTGTCTCCCTGGACGACCTGCAGAACGGCTTCTCCAATAT | + |
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Preference number: 1 (lower is better) Translates to: CLTDGSCHVRARPLG*GCLPGRPAERLLQY Trigger: ATATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACGTGACAACTTCCATCCGTCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 90 bp | TACATGGCACATAGTGGTATTATTGGCACAGGTTCAGAATCGTGGTaGGAGTCCCAGGCGTCGGGAGCTGTCTCCTGTCCTTCTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: YMAHSGIIGTGSESW*ESQASGAVSCPSLH Trigger: ATGCAGAGAAGGACAGGAGACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAATACCACTATGTGCCATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 90 bp | CATTACATGGCACATAGTGGTATTATTGGCACAGGTTCAGAATCGTaGTGCGAGTCCCAGGCGTCGGGAGCTGTCTCCTGTCCTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HYMAHSGIIGTGSES*CESQASGAVSCPSL Trigger: CAGAGAAGGACAGGAGACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAATACCACTATGTGCCATGTAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 90 bp | GTGATAAAGCCACACATGAGTACCGTTCGGCAAGTGTCTGACGGATaGAAGTTGTCACGTAAGGGCTCGTCCTCTGGGTTGAGGCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: VIKPHMSTVRQVSDG*KLSRKGSSSGLRLS Trigger: AGACAGCCTCAACCCAGAGGACGAGCCCTTACGTGACAACTTCCATCCGTCAGACACTTGCCGAACGGTACTCATGTGTGGCTTTATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 90 bp | AAGTTGTCACGTAAGGGCTCGTCCTCTGGGTTGAGGCTGTCTCCCTaGACGACCTGCAGAACGGCTTCTCCAATATATGCATATAAATGC | + |
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Preference number: 1 (lower is better) Translates to: KLSRKGSSSGLRLSP*TTCRTASPIYAYKC Trigger: GCATTTATATGCATATATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACGTGACAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 90 bp | CGTAAGGGCTCGTCCTCTGGGTTGAGGCTGTCTCCCTGGACGACCTaGAGAACGGCTTCTCCAATATATGCATATAAATGCTTGTATGTT | + |
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Preference number: 1 (lower is better) Translates to: RKGSSSGLRLSPWTT*RTASPIYAYKCLYV Trigger: AACATACAAGCATTTATATGCATATATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR TCA 90 bp | TATGTGCGGGTGCGGGTGCGGGTGCATGTGTGTGTGTGCTGCGTGTaGTGTGATTTGCCAAAGTACAAAACACAGGTTTATTTCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: YVRVRVRVHVCVCCV*CDLPKYKTQVYFCS Trigger: TGAACAGAAATAAACCTGTGTTTTGTACTTTGGCAAATCACATCACACGCAGCACACACACACATGCACCCGCACCCGCACCCGCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 90 bp | GCATATAAATGCTTGTATGTTTGTATGTGCGGGTGCGGGTGCGGGTaGATGTGTGTGTGTGCTGCGTGTGATGTGATTTGCCAAAGTACA | + |
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Preference number: 1 (lower is better) Translates to: AYKCLYVCMCGCGCG*MCVCAACDVICQST Trigger: TGTACTTTGGCAAATCACATCACACGCAGCACACACACACATGCACCCGCACCCGCACCCGCACATACAAACATACAAGCATTTATATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 90 bp | GAGATTTCAAACCATTTCTCAGACACAAAGGCCACAGGGATGAGATaGCTATCCGCAGAGGATGTTCGGTTTCCGTTGAATGTGGACTTG | + |
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Preference number: 1 (lower is better) Translates to: EISNHFSDTKATGMR*LSAEDVRFPLNVDL Trigger: CAAGTCCACATTCAACGGAAACCGAACATCCTCTGCGGATAGGCATCTCATCCCTGTGGCCTTTGTGTCTGAGAAATGGTTTGAAATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR GCA 90 bp | ATATATGCATATAAATGCTTGTATGTTTGTATGTGCGGGTGCGGGTaGGGGTGCATGTGTGTGTGTGCTGCGTGTGATGTGATTTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: IYAYKCLYVCMCGCG*GCMCVCAACDVICQ Trigger: TTGGCAAATCACATCACACGCAGCACACACACACATGCACCCGCACCCGCACCCGCACATACAAACATACAAGCATTTATATGCATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 90 bp | TCTCCAATATATGCATATAAATGCTTGTATGTTTGTATGTGCGGGTaGGGGTGCGGGTGCATGTGTGTGTGTGCTGCGTGTGATGTGATT | + |
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Preference number: 1 (lower is better) Translates to: SPIYAYKCLYVCMCG*GCGCMCVCAACDVI Trigger: AATCACATCACACGCAGCACACACACACATGCACCCGCACCCGCACCCGCACATACAAACATACAAGCATTTATATGCATATATTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGAGTTCCCGCGGGCAAACAGAAGCAGCGGGTGCGGGACCCTCCCCTTACATGAAACAGACACATaGCGTCTGCCCCGCCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SAEFPRANRSSGCGTLPLHETDT*RLPRPQ Trigger: CTGGGGGCGGGGCAGACGCCATGTGTCTGTTTCATG...TAAGGGGAGGGTCCCGCACCCGCTGCTTCTGTTTGCCCGCGGGAACTCAGCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CAA 90 bp | AGATGCCTATCCGCAGAGGATGTTCGGTTTCCGTTGAATGTGGACTaGTACTCCCCGGTCGAGTGCAGCGTCTCGTCGGCATACACGGGC | + |
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Preference number: 2 (lower is better) Translates to: RCLSAEDVRFPLNVD*YSPVECSVSSAYTG Trigger: GCCCGTGTATGCCGACGAGACGCTGCACTCGACCGGGGAGTACAAGTCCACATTCAACGGAAACCGAACATCCTCTGCGGATAGGCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR CAA 90 bp | GCCACAGGGATGAGATGCCTATCCGCAGAGGATGTTCGGTTTCCGTaGAATGTGGACTTGTACTCCCCGGTCGAGTGCAGCGTCTCGTCG | + |
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Preference number: 2 (lower is better) Translates to: ATGMRCLSAEDVRFP*NVDLYSPVECSVSS Trigger: CGACGAGACGCTGCACTCGACCGGGGAGTACAAGTCCACATTCAACGGAAACCGAACATCCTCTGCGGATAGGCATCTCATCCCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR CAA 90 bp | CTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATaGGCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LLPSFRVITWHIVVL*AQVQNRGASPRRRE Trigger: CTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CAA 90 bp | AAGCCACACATGAGTACCGTTCGGCAAGTGTCTGACGGATGGAAGTaGTCACGTAAGGGCTCGTCCTCTGGGTTGAGGCTGTCTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KPHMSTVRQVSDGWK*SRKGSSSGLRLSPW Trigger: CCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACGTGACAACTTCCATCCGTCAGACACTTGCCGAACGGTACTCATGTGTGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR TCA 90 bp | GACACAAAGGCCACAGGGATGAGATGCCTATCCGCAGAGGATGTTCGGTTTCCGGCCCTGACACACTCGTaGGAACACTGCAGTGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: DTKATGMRCLSAEDVRFPALTHS*EHCSVS Trigger: TGAGACACTGCAGTGTTCTCACGAGTGTGTCAGGGC...CGGAAACCGAACATCCTCTGCGGATAGGCATCTCATCCCTGTGGCCTTTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCTGGGTTGAGGCTGTCTCCCTGGACGACCTGCAGAACGGCTTCTCCAATCTCCAGTCCGCTTCTTaGGTGTCTTCTTTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VLWVEAVSLDDLQNGFSNLQSAS*VSSFCS Trigger: AGAGCAGAAAGAAGACACGCAAGAAGCGGACTGGAG...ATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR GCA 90 bp | ATTATTGGCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAGCTGTCTGCGTGTCTTCTTTCTaGTCTCCGGAGAAAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: IIGTGSESWCESQASGAVCVSSF*SPEKTL Trigger: CAGAGTTTTCTCCGGAGAGCAGAAAGAAGACACGCA...GACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCTATGCTTGTATGACACAAATGTTCGAGAATCTGCCACCCACCCAACCTTCGTTGGCAGTCGGCTaGGTGAGCGCGTGTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SVYACMTQMFENLPPTQPSLAVG*VSACGC Trigger: ACAGCCACACGCGCTCACGCAGCCGACTGCCAACGA...AGGTTGGGTGGGTGGCAGATTCTCGAACATTTGTGTCATACAAGCATAGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGGAGGTAAAAAGCCTTCGGCCAGTCAGCAGGAGATTTCAAACCATTTCTCAACTCTCCTCCTGCTaGTTCATCTTCCGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PQEVKSLRPVSRRFQTISQLSSC*FIFRWW Trigger: CCACCAGCGGAAGATGAATCAGCAGGAGGAGAGTTG...AGAAATGGTTTGAAATCTCCTGCTGACTGGCCGAAGGCTTTTTACCTCCTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATTGGCACAGTCTCCTGTCCTTCTCTaGATGGCATTCTCTGCCGTC | + |
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Preference number: 2 (lower is better) Translates to: LLPSFRVITWHIVVLLAQSPVLL*MAFSAV Trigger: GACGGCAGAGAATGCCATGCAGAGAAGGACAGGAGA...CTGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR TCA 72 bp | ACTCGTGAGAACACTGCAGTGTCTCATTATAGGCGGTaGAGATGTCCACACTGCTGGGCACCCGGGCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: TRENTAVSHYRR*RCPHCWAPGPG Trigger: CCCCGGCCCGGGTGCCCAGCAGTGTGGACATCTTCACCGCCTATAATGAGACACTGCAGTGTTCTCACGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR GCA 72 bp | AGTCCCAGGCGTCGGGAGCTGTCTCCTGTCCTTCTCTaGATGGCATTCTCTGCCGTCTCCAGTCCGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: SPRRRELSPVLL*MAFSAVSSPLL Trigger: AAGAAGCGGACTGGAGACGGCAGAGAATGCCATGCAGAGAAGGACAGGAGACAGCTCCCGACGCCTGGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 72 bp | TTTCCGTTGAATGTGGACTTGTACTCCCCGGTCGAGTaGAGCGTCTCGTCGGCATACACGGGCACAGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: FPLNVDLYSPVE*SVSSAYTGTEA Trigger: GGCCTCTGTGCCCGTGTATGCCGACGAGACGCTGCACTCGACCGGGGAGTACAAGTCCACATTCAACGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| 3UTR TCA 72 bp | ACAAAAATAGATTTGGCCTTGGGTGTCCTGCTCAGCTaGGTTCCCGCGGGCAAACAGAAGCAGCGGGTGCGG | + |
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Preference number: 3 (lower is better) Translates to: TKIDLALGVLLS*VPAGKQKQRVR Trigger: CCGCACCCGCTGCTTCTGTTTGCCCGCGGGAACTCAGCTGAGCAGGACACCCAAGGCCAAATCTATTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 72 bp | CGTAAGGGCTCGTCCTCTGGGTTGAGGCTGTCTCCCTaGACGACCTGCAGAACGGCTTCTCCAATATATGCA | + |
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Preference number: 3 (lower is better) Translates to: RKGSSSGLRLSP*TTCRTASPIYA Trigger: TGCATATATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 72 bp | GACACAAATGTTCGAGAATCTGCCACCCACCCAACCTaGTTCTCAGGCTCACTCGTTGGCAGTCGGCTGCGT | + |
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Preference number: 3 (lower is better) Translates to: DTNVRESATHPT*FSGSLVGSRLR Trigger: ACGCAGCCGACTGCCAACGAGTGAGCCTGAGAACCAGGTTGGGTGGGTGGCAGATTCTCGAACATTTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 72 bp | GGAGCTGTCTCCTGTCCTTCTCTGCATGGCATTCTCTaGCGTCTCCAGTCCGCTTCTTGCGTGTCTTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: GAVSCPSLHGIL*RLQSASCVSSF Trigger: GAAAGAAGACACGCAAGAAGCGGACTGGAGACGGCAGAGAATGCCATGCAGAGAAGGACAGGAGACAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 72 bp | GCACATAGTGGTATTATTGGCACAGGTTCAGAATCGTaGTGCGAGTCCCAGGCGTCGGGAGCTGTCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: AHSGIIGTGSES*CESQASGAVSC Trigger: ACAGGAGACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAATACCACTATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CCA 72 bp | CCACACATGAGTACCGTTCGGCAAGTGTCTGACGGATaGAAGTTGTCACGTAAGGGCTCGTCCTCTGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: PHMSTVRQVSDG*KLSRKGSSSGL Trigger: CAACCCAGAGGACGAGCCCTTACGTGACAACTTCCATCCGTCAGACACTTGCCGAACGGTACTCATGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR GCA 72 bp | TCGTCCTCTGGGTTGAGGCTGTCTCCCTGGACGACCTaGAGAACGGCTTCTCCAATATATGCATATAAATGC | + |
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Preference number: 3 (lower is better) Translates to: SSSGLRLSPWTT*RTASPIYAYKC Trigger: GCATTTATATGCATATATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR TCA 72 bp | GTGCGGGTGCGGGTGCATGTGTGTGTGTGCTGCGTGTaGTGTGATTTGCCAAAGTACAAAACACAGGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: VRVRVHVCVCCV*CDLPKYKTQVY Trigger: ATAAACCTGTGTTTTGTACTTTGGCAAATCACATCACACGCAGCACACACACACATGCACCCGCACCCGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTCGGCTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATTGTTTTGTTGTTTTGTTaGTACAAGTTCACCAACGGA | + |
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Preference number: 3 (lower is better) Translates to: GSAPAELPGHYMAHSGIIVLLFC*YKFTNG Trigger: TCCGTTGGTGAACTTGTACAAACAAAACAACAAAAC...AATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAGCCGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR TCA 72 bp | GGTGCGGGTGCATGTGTGTGTGTGCTGCGTGTGATGTaGTTTGCCAAAGTACAAAACACAGGTTTATTTCTG | + |
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Preference number: 3 (lower is better) Translates to: GAGACVCVLRVM*FAKVQNTGLFL Trigger: CAGAAATAAACCTGTGTTTTGTACTTTGGCAAATCACATCACACGCAGCACACACACACATGCACCCGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGTCTATGCTTGTATGACACAAATGTTCGAGAATCTGCCACCCACCCAACCTCACATAGTGGTATTATaGGCACAGGTTCAGAATCGT | + |
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Preference number: 3 (lower is better) Translates to: SVYACMTQMFENLPPTQPHIVVL*AQVQNR Trigger: ACGATTCTGAACCTGTGCCAATAATACCACTATGTG...AGGTTGGGTGGGTGGCAGATTCTCGAACATTTGTGTCATACAAGCATAGACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR-3UTR CAA 90 bp | ACGACCTGCAGAACGGCTTCTCCAATATATGCATATAAATGCTTGTATGTTTGTTTTACAAAAATAGATTaGGCCTTGGGTGTCCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: TTCRTASPIYAYKCLYVCFTKID*ALGVLL Trigger: GAGCAGGACACCCAAGGCCAAATCTATTTTTGTAAA...ACAAACATACAAGCATTTATATGCATATATTGGAGAAGCCGTTCTGCAGGTCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | GCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAGCTGTCTCCTGTCCCGAGGGTGGCTACCTaGTCCCTGGGCCTGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AQVQNRGASPRRRELSPVPRVAT*SLGLWA Trigger: GGCCCACAGGCCCAGGGACCAGGTAGCCACCCTCGG...GACAGGAGACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTGAGTTCCCGCGGGCAAACAGAAGCAGCGGGTGCGGGACCCTCCCCTTAGGGAAGGGCTCGACCTaGTGGCAGCTGGGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SAEFPRANRSSGCGTLPLGKGST*WQLGAW Trigger: CCAAGCCCCCAGCTGCCACCAGGTCGAGCCCTTCCC...TAAGGGGAGGGTCCCGCACCCGCTGCTTCTGTTTGCCCGCGGGAACTCAGCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | AGAATCTGCCACCCACCCAACCTGGTTCTCAGGCTCACTCGTTGGCAGTCGGCTCGACCTGGTGGCAGCTaGGGGCTTGGTGAGTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RICHPPNLVLRLTRWQSARPGGS*GLGESP Trigger: GGGGGACTCACCAAGCCCCCAGCTGCCACCAGGTCG...AGCCGACTGCCAACGAGTGAGCCTGAGAACCAGGTTGGGTGGGTGGCAGATTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | GCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAGCTGTCTCCTGTCCGGTGGTGGTGGTGGTaGTGGCCACCGTTGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AQVQNRGASPRRRELSPVRWWWW*WPPLSS Trigger: GGAAGACAACGGTGGCCACCACCACCACCACCACCG...GACAGGAGACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | CTGTCTCCTGTCCTTCTCTGCATGGCATTCTCTGCCGTCTCCAGTCCGCTTCTTTGCTGGCCGCGGTGGTaGTGGTGGTGGTGGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: LSPVLLCMAFSAVSSPLLCWPRW*WWWWPP Trigger: CGGTGGCCACCACCACCACCACCACCGCGGCCAGCA...AAGAAGCGGACTGGAGACGGCAGAGAATGCCATGCAGAGAAGGACAGGAGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | ATTATTGGCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAGCTGTCAGACTCCACAGCCGCTaGGGCCTCTGTGGGCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIGTGSESWCESQASGAVRLHSR*GLCGRD Trigger: GTCACGCCCACAGAGGCCCCAGCGGCTGTGGAGTCT...GACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTCGGCTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATGGCTACCTGGTCCCTaGGCCTGTGGGCCCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WARLLPSFRVITWHIVVLWLPGP*ACGPSE Trigger: CTCGGAGGGCCCACAGGCCCAGGGACCAGGTAGCCA...TAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAGCCGAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | TCACGTAAGGGCTCGTCCTCTGGGTTGAGGCTGTCTCCCTGGACGACCTGCAGACACCAGGGAAGGTGTTaGACTCCAGGGCGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKGSSSGLRLSPWTTCRHQGRC*TPGRPH Trigger: ATGAGGACGCCCTGGAGTCCAACACCTTCCCTGGTG...TCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CAA 72 bp | GGATGGAAGTTGTCACGTAAGGGCTCGTCCTCTGGGTaGAGGCTGTCTCCCTGGACGACCTGCAGAACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWKLSRKGSSSG*RLSPWTTCRTA Trigger: AGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACGTGACAACTTCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR TCA 90 bp | AGAATCTGCCACCCACCCAACCTGGTTCTCAGGCTCACTCGTTGGCAGTCGGCTCAACTCTCCTCCTGCTaGTTCATCTTCCGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RICHPPNLVLRLTRWQSAQLSSC*FIFRWW Trigger: CCACCAGCGGAAGATGAATCAGCAGGAGGAGAGTTG...AGCCGACTGCCAACGAGTGAGCCTGAGAACCAGGTTGGGTGGGTGGCAGATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR TCA 90 bp | TGTATGACACAAATGTTCGAGAATCTGCCACCCACCCAACCTGGTTCTCAGGCTGCACCCGGGCCGGGGTaGAGTCCGTCAAGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CMTQMFENLPPTQPGSQAAPGPG*SPSSSG Trigger: GCCAGAACTTGACGGACTTCACCCCGGCCCGGGTGC...AGCCTGAGAACCAGGTTGGGTGGGTGGCAGATTCTCGAACATTTGTGTCATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR TCA 90 bp | GTCCTCTGGGTTGAGGCTGTCTCCCTGGACGACCTGCAGAACGGCTTCTCCAATGCCCTGACACACTCGTaGGAACACTGCAGTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLWVEAVSLDDLQNGFSNALTHS*EHCSVS Trigger: TGAGACACTGCAGTGTTCTCACGAGTGTGTCAGGGC...ATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGGAGACAGCCTCAACCCAGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR GCA 90 bp | CTGTCTCCTGTCCTTCTCTGCATGGCATTCTCTGCCGTCTCCAGTCCGCTTCTTGTGACCCCCTTAGTCTaGAGTGTCATGGCGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPVLLCMAFSAVSSPLLVTPLV*SVMAVA Trigger: GGCCACCGCCATGACACTGCAGACTAAGGGGGTCAC...AAGAAGCGGACTGGAGACGGCAGAGAATGCCATGCAGAGAAGGACAGGAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CAA 72 bp | TCCGCAGAGGATGTTCGGTTTCCGTTGAATGTGGACTaGTACTCCCCGGTCGAGTGCAGCGTCTCGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAEDVRFPLNVD*YSPVECSVSSA Trigger: TGCCGACGAGACGCTGCACTCGACCGGGGAGTACAAGTCCACATTCAACGGAAACCGAACATCCTCTGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCCTGTCCTTCTCTGCATGGCATTCTCTGCCGTCTCCAGTCCGCTTCTTTCCGTGTTTGCAAGATaGAGACCGTGGTGGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPVLLCMAFSAVSSPLLSVFAR*RPWWGR Trigger: TCGGCCCCACCACGGTCTCCATCTTGCAAACACGGA...AAGAAGCGGACTGGAGACGGCAGAGAATGCCATGCAGAGAAGGACAGGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | ACCAGAAATAGTGACTCTACCGGAAGTGATCCCCACCCCTGTCCTCTGTTAAGACCGCGGTGGTGGTGGTaGTGGTGGCCACCGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRNSDSTGSDPHPCPLLRPRWWW*WWPPLS Trigger: AGACAACGGTGGCCACCACCACCACCACCACCGCGG...TCTTAACAGAGGACAGGGGTGGGGATCACTTCCGGTAGAGTCACTATTTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR TCA 90 bp | ATTATTGGCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAGCTGTCGTGATGGTGATGATCTaGTGCACAGCCAGACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IIGTGSESWCESQASGAVVMVMI*CTARPE Trigger: CTCAGGTCTGGCTGTGCATCAGATCATCACCATCAC...GACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR GCA 90 bp | GCTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATTGGCACAGAGGCCCTGGTGCTCTaGAGCCCCAGCAGTCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: APAELPGHYMAHSGIIGTEALVL*SPSSHY Trigger: ATAGTGACTGCTGGGGCTGCAGAGCACCAGGGCCTC...TGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | GCTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATTGGCACAAGATGGAGACCGTGGTaGGGCCGAAACCACCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: APAELPGHYMAHSGIIGTRWRPW*GRNHQG Trigger: TCCCTGGTGGTTTCGGCCCCACCACGGTCTCCATCT...TGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATTGGCACAGGCAAGATGGAGACCGTaGTGGGGCCGAAACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSFRVITWHIVVLLAQARWRP*WGRNHQ Trigger: CTGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGC...CTGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR GCA 90 bp | ATTATTGGCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAGCTGTCAAGTCGACCGCAAGCTaGAGCATGGCTATCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: IIGTGSESWCESQASGAVKSTAS*SMAISI Trigger: GATACTGATAGCCATGCTGCAGCTTGCGGTCGACTT...GACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | AGTGGTATTATTGGCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGATTCATCTTCCGCTGGTaGCTATTCCTCCGAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGIIGTGSESWCESQASGFIFRW*LFLRVC Trigger: GCACACTCGGAGGAATAGCCACCAGCGGAAGATGAA...TCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAATACCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR TCA 90 bp | TATATATGTATATTAACCAGAAATAGTGACTCTACCGGAAGTGATCCCCACCCCGGGCCTCTGTGGGCGTaGCAGGAGCCGGAACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YICILTRNSDSTGSDPHPGPLWA*QEPELG Trigger: CCCGAGTTCCGGCTCCTGTCACGCCCACAGAGGCCC...GGGGTGGGGATCACTTCCGGTAGAGTCACTATTTCTGGTTAATATACATATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR TCA 90 bp | AGAGGATGTTCGGTTTCCGTTGAATGTGGACTTGTACTCCCCGGTCGAGTGCAGGTGATGGTGATGATCTaGTGCACAGCCAGACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGCSVSVECGLVLPGRVQVMVMI*CTARPE Trigger: CTCAGGTCTGGCTGTGCATCAGATCATCACCATCAC...CTGCACTCGACCGGGGAGTACAAGTCCACATTCAACGGAAACCGAACATCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149177.2 |
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| CDS-3UTR TCA 90 bp | TGTATGACACAAATGTTCGAGAATCTGCCACCCACCCAACCTGGTTCTCAGGCTCAAAGGCCACAGGGATaGGATGCCTATCCGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CMTQMFENLPPTQPGSQAQRPQG*DAYPQR Trigger: CCTCTGCGGATAGGCATCTCATCCCTGTGGCCTTTG...AGCCTGAGAACCAGGTTGGGTGGGTGGCAGATTCTCGAACATTTGTGTCATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | TGTATGACACAAATGTTCGAGAATCTGCCACCCACCCAACCTGGTTCTCAGGCTATCAGTATCCAGGCATaGCTTCCGAGAGAGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CMTQMFENLPPTQPGSQAISIQA*LPRERP Trigger: CGGCCGCTCTCTCGGAAGCCATGCCTGGATACTGAT...AGCCTGAGAACCAGGTTGGGTGGGTGGCAGATTCTCGAACATTTGTGTCATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CAA 72 bp | TCTGCATGGCATTCTCTGCCGTCTCCAGTCCGCTTCTaGCGTGTCTTCTTTCTGCTCTCCGGAGAAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWHSLPSPVRF*RVFFLLSGENS Trigger: AGAGTTTTCTCCGGAGAGCAGAAAGAAGACACGCAAGAAGCGGACTGGAGACGGCAGAGAATGCCATGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR GCA 90 bp | CCCTGGACGACCTGCAGAACGGCTTCTCCAATATATGCATATAAATGCTTGTATCTTAGGAGGCCCTGGTaGTCTGCAGCCCCAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PWTTCRTASPIYAYKCLYLRRPW*SAAPAV Trigger: GACTGCTGGGGCTGCAGAGCACCAGGGCCTCCTAAG...ATACAAGCATTTATATGCATATATTGGAGAAGCCGTTCTGCAGGTCGTCCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | CTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATTGGCACAGCCGCAAGCTGCAGCATaGCTATCAGTATCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPSFRVITWHIVVLLAQPQAAA*LSVSRH Trigger: ATGCCTGGATACTGATAGCCATGCTGCAGCTTGCGG...CTGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR GCA 90 bp | ACGACCTGCAGAACGGCTTCTCCAATATATGCATATAAATGCTTGTATGTTTGTTCCGTGGGCACGTTCTaGCCGGGCAGCACGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TTCRTASPIYAYKCLYVCSVGTF*PGSTGT Trigger: AGTCCCCGTGCTGCCCGGGCAGAACGTGCCCACGGA...ACAAACATACAAGCATTTATATGCATATATTGGAGAAGCCGTTCTGCAGGTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| 3UTR CAA 72 bp | AGCTTCCGGGTCATTACATGGCACATAGTGGTATTATaGGCACAGGTTCAGAATCGTGGTGCGAGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRVITWHIVVL*AQVQNRGASPR Trigger: CCTGGGACTCGCACCACGATTCTGAACCTGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CCA 90 bp | TGTTTTGTTTGTACAAGTTCACCAACGGAATCCATGAAACAGACACATGGCGTCCCCCAGCAGTCACTATaGAGGATGAGGCCGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFVCTSSPTESMKQTHGVPQQSL*RMRPSQ Trigger: CTGCGACGGCCTCATCCTCCATAGTGACTGCTGGGG...GACGCCATGTGTCTGTTTCATGGATTCCGTTGGTGAACTTGTACAAACAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR GCA 90 bp | TTGTTGTTTTGTTTGTACAAGTTCACCAACGGAATCCATGAAACAGACACATGGGTTGTCTTCCGTGTTTaGAAGATGGAGACCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFCLYKFTNGIHETDTWVVFRV*KMETVV Trigger: CACCACGGTCTCCATCTTGCAAACACGGAAGACAAC...CCATGTGTCTGTTTCATGGATTCCGTTGGTGAACTTGTACAAACAAAACAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | CCCTGGGCCTGTGGGCCCTCCGAGCACGGGGAGTCTGCATCTGTATaGGTCCGTGGGCACGTTCTGCCCGGGCAGCACGGGGACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWACGPSEHGESASV*VRGHVLPGQHGDSR Trigger: CCTGGAGTCCCCGTGCTGCCCGGGCAGAACGTGCCCACGGACCCATACAGATGCAGACTCCCCGTGCTCGGAGGGCCCACAGGCCCAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS TCA 90 bp | CAGAGGCGAGGGAAGGGCTCGACCTGGTGGCAGCTGGGGGCTTGGTaGGTCCCCCTTTGGGTCCGAGGGTGGCTACCTGGTCCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRRGKGSTWWQLGAW*VPLWVRGWLPGPWA Trigger: GGCCCAGGGACCAGGTAGCCACCCTCGGACCCAAAGGGGGACTCACCAAGCCCCCAGCTGCCACCAGGTCGAGCCCTTCCCTCGCCTCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 90 bp | GCTACCTGGTCCCTGGGCCTGTGGGCCCTCCGAGCACGGGGAGTCTaGATCTGTATGGGTCCGTGGGCACGTTCTGCCCGGGCAGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: ATWSLGLWALRARGV*ICMGPWARSARAAR Trigger: CCGTGCTGCCCGGGCAGAACGTGCCCACGGACCCATACAGATGCAGACTCCCCGTGCTCGGAGGGCCCACAGGCCCAGGGACCAGGTAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | CCCGTCTTAGGAGGCCCTGGTGCTCTGCAGCCCCAGCAGTCACTATaGAGGATGAGGCCGTCGCAGAGGCGAGGGAAGGGCTCGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVLGGPGALQPQQSL*RMRPSQRRGKGSTW Trigger: CCAGGTCGAGCCCTTCCCTCGCCTCTGCGACGGCCTCATCCTCCATAGTGACTGCTGGGGCTGCAGAGCACCAGGGCCTCCTAAGACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | GTGTCATGGCGGTGGCCGTGCTGGCCGCGGTGGTGGTGGTGGTGGTaGCCACCGTTGTCTTCCGTGTTTGCAAGATGGAGACCGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSWRWPCWPRWWWWW*PPLSSVFARWRPWW Trigger: CCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCACCACCGCGGCCAGCACGGCCACCGCCATGACAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 90 bp | GCCGCGGTGGTGGTGGTGGTGGTGGCCACCGTTGTCTTCCGTGTTTaGAAGATGGAGACCGTGGTGGGGCCGAAACCACCAGGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAVVVVVVATVVFRV*KMETVVGPKPPGKV Trigger: CACCTTCCCTGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCACCACCGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | GGGAAGTCGACCGCAAGCTGCAGCATGGCTATCAGTATCCAGGCATaGCTTCCGAGAGAGCGGCCGGGCCAGCGGATAGACATGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKSTASCSMAISIQA*LPRERPGQRIDMEL Trigger: CAGCTCCATGTCTATCCGCTGGCCCGGCCGCTCTCTCGGAAGCCATGCCTGGATACTGATAGCCATGCTGCAGCTTGCGGTCGACTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | GGCCTAGTGAGTCACAGGATGGGAAGTCGACCGCAAGCTGCAGCATaGCTATCAGTATCCAGGCATGGCTTCCGAGAGAGCGGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVSHRMGSRPQAAA*LSVSRHGFRESGRA Trigger: GGCCCGGCCGCTCTCTCGGAAGCCATGCCTGGATACTGATAGCCATGCTGCAGCTTGCGGTCGACTTCCCATCCTGTGACTCACTAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 90 bp | GGCCCAGGGCCTAGTGAGTCACAGGATGGGAAGTCGACCGCAAGCTaGAGCATGGCTATCAGTATCCAGGCATGGCTTCCGAGAGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGPSESQDGKSTAS*SMAISIQAWLPRER Trigger: CCGCTCTCTCGGAAGCCATGCCTGGATACTGATAGCCATGCTGCAGCTTGCGGTCGACTTCCCATCCTGTGACTCACTAGGCCCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | TGGTGGTGGCCACCGTTGTCTTCCGTGTTTGCAAGATGGAGACCGTaGTGGGGCCGAAACCACCAGGGAAGGTGTTGGACTCCAGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: WWWPPLSSVFARWRP*WGRNHQGRCWTPGR Trigger: ACGCCCTGGAGTCCAACACCTTCCCTGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS TCA 90 bp | CGGGCCGGGGTGAAGTCCGTCAAGTTCTGGCAACTCTCCTCCTGCTaGTTCATCTTCCGCTGGTGGCTATTCCTCCGAGTGTGCCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RAGVKSVKFWQLSSC*FIFRWWLFLRVCPL Trigger: AAGCGGGCACACTCGGAGGAATAGCCACCAGCGGAAGATGAATCAGCAGGAGGAGAGTTGCCAGAACTTGACGGACTTCACCCCGGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | TGGTGGTGGTGGTGGTGGCCACCGTTGTCTTCCGTGTTTGCAAGATaGAGACCGTGGTGGGGCCGAAACCACCAGGGAAGGTGTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWWPPLSSVFAR*RPWWGRNHQGRCWT Trigger: AGTCCAACACCTTCCCTGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 90 bp | AACTCTGTATCATGTGTGTGCCTCCTACCCCGTCTTAGGAGGCCCTaGTGCTCTGCAGCCCCAGCAGTCACTATGGAGGATGAGGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: NSVSCVCLLPRLRRP*CSAAPAVTMEDEAV Trigger: GACGGCCTCATCCTCCATAGTGACTGCTGGGGCTGCAGAGCACCAGGGCCTCCTAAGACGGGGTAGGAGGCACACACATGATACAGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 90 bp | CTGCCACCACGGAAGTCGAAATCGTTGAACTCTGTATCATGTGTGTaGCTCCTACCCCGTCTTAGGAGGCCCTGGTGCTCTGCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPRKSKSLNSVSCV*LLPRLRRPWCSAAP Trigger: TGGGGCTGCAGAGCACCAGGGCCTCCTAAGACGGGGTAGGAGGCACACACATGATACAGAGTTCAACGATTTCGACTTCCGTGGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CAA 90 bp | GCACAGGTTCAGAATCGTGGTGCGAGTCCCAGGCGTCGGGAGCTGTCTCCTGTCGATGTTCGGTTTCCGTaGAATGTGGACTTGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQVQNRGASPRRRELSPVDVRFP*NVDLYS Trigger: GGAGTACAAGTCCACATTCAACGGAAACCGAACATC...GACAGGAGACAGCTCCCGACGCCTGGGACTCGCACCACGATTCTGAACCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CAA 90 bp | ACCAGAAATAGTGACTCTACCGGAAGTGATCCCCACCCCTGTCCTCTGTTAAGACCACCAGGGAAGGTGTaGGACTCCAGGGCGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRNSDSTGSDPHPCPLLRPPGKV*DSRASS Trigger: TGAGGACGCCCTGGAGTCCAACACCTTCCCTGGTGG...TCTTAACAGAGGACAGGGGTGGGGATCACTTCCGGTAGAGTCACTATTTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
||
| CDS-3UTR CAA 90 bp | TCGCTGGGCTCGGCTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTCGGAAGTCGAAATCGTaGAACTCTGTATCATGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGSAPAELPGHYMAHSGRKSKS*NSVSCV Trigger: CACACATGATACAGAGTTCAACGATTTCGACTTCCG...ACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAGCCGAGCCCAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CAA 90 bp | GCTTCTTGCGTGTCTTCTTTCTGCTCTCCGGAGAAAACTCTGGGAGACGGGAGCTGGATGTCTTTCCCATaGCTGCTGGGACTAGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASCVSSFCSPEKTLGDGSWMSFP*LLGLVE Trigger: TTCCACTAGTCCCAGCAGCAATGGGAAAGACATCCA...GCTCCCGTCTCCCAGAGTTTTCTCCGGAGAGCAGAAAGAAGACACGCAAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS-3UTR CAA 90 bp | CTCCTGCCGAGCTTCCGGGTCATTACATGGCACATAGTGGTATTATTGGCACAGCGTTGTCTTCCGTGTTaGCAAGATGGAGACCGTGGT | + |
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Preference number: 5 (lower is better) Translates to: LLPSFRVITWHIVVLLAQRCLPC*QDGDRG Trigger: ACCACGGTCTCCATCTTGCAAACACGGAAGACAACG...CTGTGCCAATAATACCACTATGTGCCATGTAATGACCCGGAAGCTCGGCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CAA 90 bp | GAAGGGCTCGACCTGGTGGCAGCTGGGGGCTTGGTGAGTCCCCCTTaGGGTCCGAGGGTGGCTACCTGGTCCCTGGGCCTGTGGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: EGLDLVAAGGLVSPP*GPRVATWSLGLWAL Trigger: GAGGGCCCACAGGCCCAGGGACCAGGTAGCCACCCTCGGACCCAAAGGGGGACTCACCAAGCCCCCAGCTGCCACCAGGTCGAGCCCTTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CAA 90 bp | GTCGCAGAGGCGAGGGAAGGGCTCGACCTGGTGGCAGCTGGGGGCTaGGTGAGTCCCCCTTTGGGTCCGAGGGTGGCTACCTGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: VAEAREGLDLVAAGG*VSPPLGPRVATWSL Trigger: CAGGGACCAGGTAGCCACCCTCGGACCCAAAGGGGGACTCACCAAGCCCCCAGCTGCCACCAGGTCGAGCCCTTCCCTCGCCTCTGCGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 72 bp | TCCCTGGGCCTGTGGGCCCTCCGAGCACGGGGAGTCTaGATCTGTATGGGTCCGTGGGCACGTTCTGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SLGLWALRARGV*ICMGPWARSAR Trigger: CCGGGCAGAACGTGCCCACGGACCCATACAGATGCAGACTCCCCGTGCTCGGAGGGCCCACAGGCCCAGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | TTGGTGAGTCCCCCTTTGGGTCCGAGGGTGGCTACCTaGTCCCTGGGCCTGTGGGCCCTCCGAGCACGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LVSPPLGPRVAT*SLGLWALRARG Trigger: TCCCCGTGCTCGGAGGGCCCACAGGCCCAGGGACCAGGTAGCCACCCTCGGACCCAAAGGGGGACTCACCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | CGCAGAGGCGAGGGAAGGGCTCGACCTGGTGGCAGCTaGGGGCTTGGTGAGTCCCCCTTTGGGTCCGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: RRGEGRARPGGS*GLGESPFGSEG Trigger: ACCCTCGGACCCAAAGGGGGACTCACCAAGCCCCCAGCTGCCACCAGGTCGAGCCCTTCCCTCGCCTCTGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CAA 72 bp | GACCTGGTGGCAGCTGGGGGCTTGGTGAGTCCCCCTTaGGGTCCGAGGGTGGCTACCTGGTCCCTGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DLVAAGGLVSPP*GPRVATWSLGL Trigger: CAGGCCCAGGGACCAGGTAGCCACCCTCGGACCCAAAGGGGGACTCACCAAGCCCCCAGCTGCCACCAGGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS TCA 72 bp | GGGAAGGGCTCGACCTGGTGGCAGCTGGGGGCTTGGTaGGTCCCCCTTTGGGTCCGAGGGTGGCTACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GKGSTWWQLGAW*VPLWVRGWLPG Trigger: ACCAGGTAGCCACCCTCGGACCCAAAGGGGGACTCACCAAGCCCCCAGCTGCCACCAGGTCGAGCCCTTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | CTCCGAGCACGGGGAGTCTGCATCTGTATGGGTCCGTaGGCACGTTCTGCCCGGGCAGCACGGGGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LRARGVCICMGP*ARSARAARGLQ Trigger: CTGGAGTCCCCGTGCTGCCCGGGCAGAACGTGCCCACGGACCCATACAGATGCAGACTCCCCGTGCTCGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CAA 90 bp | CGGTGGCCGTGCTGGCCGCGGTGGTGGTGGTGGTGGTGGCCACCGTaGTCTTCCGTGTTTGCAAGATGGAGACCGTGGTGGGGCCGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RWPCWPRWWWWWWPP*SSVFARWRPWWGRN Trigger: GTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCACCACCGCGGCCAGCACGGCCACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | TTGGGTCCGAGGGTGGCTACCTGGTCCCTGGGCCTGTaGGCCCTCCGAGCACGGGGAGTCTGCATCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: LGPRVATWSLGL*ALRARGVCICM Trigger: CATACAGATGCAGACTCCCCGTGCTCGGAGGGCCCACAGGCCCAGGGACCAGGTAGCCACCCTCGGACCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CAA 90 bp | GGCCGCGGTGGTGGTGGTGGTGGTGGCCACCGTTGTCTTCCGTGTTaGCAAGATGGAGACCGTGGTGGGGCCGAAACCACCAGGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: GRGGGGGGGHRCLPC*QDGDRGGAETTREG Trigger: ACCTTCCCTGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCACCACCGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CAA 72 bp | TGCTGGCCGCGGTGGTGGTGGTGGTGGTGGCCACCGTaGTCTTCCGTGTTTGCAAGATGGAGACCGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CWPRWWWWWWPP*SSVFARWRPWW Trigger: CCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCACCACCGCGGCCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | ACCGCAAGCTGCAGCATGGCTATCAGTATCCAGGCATaGCTTCCGAGAGAGCGGCCGGGCCAGCGGATAGAC | + |
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Preference number: 6 (lower is better) Translates to: TASCSMAISIQA*LPRERPGQRID Trigger: GTCTATCCGCTGGCCCGGCCGCTCTCTCGGAAGCCATGCCTGGATACTGATAGCCATGCTGCAGCTTGCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CAA 72 bp | GGTGGTGGTGGTGGTGGCCACCGTTGTCTTCCGTGTTaGCAAGATGGAGACCGTGGTGGGGCCGAAACCACC | + |
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Preference number: 6 (lower is better) Translates to: GGGGGGHRCLPC*QDGDRGGAETT Trigger: GGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 72 bp | GTGGTGGTGGTGGTGGCCACCGTTGTCTTCCGTGTTTaGAAGATGGAGACCGTGGTGGGGCCGAAACCACCA | + |
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Preference number: 6 (lower is better) Translates to: VVVVVATVVFRV*KMETVVGPKPP Trigger: TGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCACCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | TGGTGGTGGCCACCGTTGTCTTCCGTGTTTGCAAGATaGAGACCGTGGTGGGGCCGAAACCACCAGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: WWWPPLSSVFAR*RPWWGRNHQGR Trigger: CCTTCCCTGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGGCCACCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | TCATGTGTGTGCCTCCTACCCCGTCTTAGGAGGCCCTaGTGCTCTGCAGCCCCAGCAGTCACTATGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SCVCLLPRLRRP*CSAAPAVTMED Trigger: ATCCTCCATAGTGACTGCTGGGGCTGCAGAGCACCAGGGCCTCCTAAGACGGGGTAGGAGGCACACACATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | CCACCGTTGTCTTCCGTGTTTGCAAGATGGAGACCGTaGTGGGGCCGAAACCACCAGGGAAGGTGTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: PPLSSVFARWRP*WGRNHQGRCWT Trigger: AGTCCAACACCTTCCCTGGTGGTTTCGGCCCCACCACGGTCTCCATCTTGCAAACACGGAAGACAACGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | GCCAGACCTGAGGTCTCCCCTAAGATCCTCGGGGGCTaGATGTCTTTCCCATTGCTGCTGGGACTAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ARPEVSPKILGG*MSFPLLLGLVE Trigger: TTCCACTAGTCCCAGCAGCAATGGGAAAGACATCCAGCCCCCGAGGATCTTAGGGGAGACCTCAGGTCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 72 bp | CCTAGTGAGTCACAGGATGGGAAGTCGACCGCAAGCTaGAGCATGGCTATCAGTATCCAGGCATGGCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: PSESQDGKSTAS*SMAISIQAWLP Trigger: CGGAAGCCATGCCTGGATACTGATAGCCATGCTGCAGCTTGCGGTCGACTTCCCATCCTGTGACTCACTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS CCA 72 bp | AGTCACAGGATGGGAAGTCGACCGCAAGCTGCAGCATaGCTATCAGTATCCAGGCATGGCTTCCGAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SHRMGSRPQAAA*LSVSRHGFRES Trigger: GCTCTCTCGGAAGCCATGCCTGGATACTGATAGCCATGCTGCAGCTTGCGGTCGACTTCCCATCCTGTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS TCA 72 bp | GTGAAGTCCGTCAAGTTCTGGCAACTCTCCTCCTGCTaGTTCATCTTCCGCTGGTGGCTATTCCTCCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VKSVKFWQLSSC*FIFRWWLFLRV Trigger: CACTCGGAGGAATAGCCACCAGCGGAAGATGAATCAGCAGGAGGAGAGTTGCCAGAACTTGACGGACTTCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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| CDS GCA 72 bp | CGGAAGTCGAAATCGTTGAACTCTGTATCATGTGTGTaGCTCCTACCCCGTCTTAGGAGGCCCTGGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RKSKSLNSVSCV*LLPRLRRPWCS Trigger: AGAGCACCAGGGCCTCCTAAGACGGGGTAGGAGGCACACACATGATACAGAGTTCAACGATTTCGACTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105646.3 |
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