RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AIRE (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000731

Ensembl transcript IDs: ENSMUST00000019257.15, ENSMUST00000105395.9, ENSMUST00000105396.9, ENSMUST00000128241.8, ENSMUST00000130972.8, ENSMUST00000131028.8, ENSMUST00000140636.8, ENSMUST00000143735.8, ENSMUST00000145975.8, ENSMUST00000148469.8, ENSMUST00000154374.2, ENSMUST00000155021.8, ENSMUST00000156417.8

Found 719 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGCAGCGGAGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAAC +
Preference number: 1 (lower is better)
Translates to: LQRRLVPGRAAAVGK*QRQWKAAAQCAHRN
Trigger: GTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCCGCTGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CCA 90 bp CTGGCGTGGGAGTCGAGTCTGCAGAGCAGGATTTGCAGCGGAGATTaGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGT +
Preference number: 1 (lower is better)
Translates to: LAWESSLQSRICSGD*SPAGRRPSGSGSAS
Trigger: ACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGACTCGACTCCCACGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CCA 90 bp CCGCAACACCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTTaGTGCTGGACCCTGCAGGGGCAACATGGGCGGCAACCCAGCCCG +
Preference number: 1 (lower is better)
Translates to: PQHLGAIATHTASRA*CWTLQGQHGRQPSP
Trigger: CGGGCTGGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp CAACACCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTTGGTaGTGGACCCTGCAGGGGCAACATGGGCGGCAACCCAGCCCGTGT +
Preference number: 1 (lower is better)
Translates to: QHLGAIATHTASRAW*WTLQGQHGRQPSPC
Trigger: ACACGGGCTGGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp GGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTaGACACCGCAACACCTCGGTGCCATCGCCACACACACTGCATCG +
Preference number: 1 (lower is better)
Translates to: GRREVAAPVEGSGTV*TPQHLGAIATHTAS
Trigger: CGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CCA 90 bp GTCGTGACTAGCAGAGTCGTCCCCTACCTTGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGGTACAGCTTCGCCCGGTGTGCCTGG +
Preference number: 1 (lower is better)
Translates to: VVTSRVVPYLGKPRC*TGPRGGYSFARCAW
Trigger: CCAGGCACACCGGGCGAAGCTGTACCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAGGTAGGGGACGACTCTGCTAGTCACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR GCA 90 bp CTGGACCCTGCAGGGGCAACATGGGCGGCAACCCAGCCCGTGTCCTaGTCACCCCACCAGCCCGGGTTAACTGGGAAACCTCAGGGTTTC +
Preference number: 1 (lower is better)
Translates to: LDPAGATWAATQPVS*SPHQPGLTGKPQGF
Trigger: GAAACCCTGAGGTTTCCCAGTTAACCCGGGCTGGTGGGGTGAGCAGGACACGGGCTGGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp CACAGTGTGCACACCGCAACACCTCGGTGCCATCGCCACACACACTaGATCGCGCGCTTGGTGCTGGACCCTGCAGGGGCAACATGGGCG +
Preference number: 1 (lower is better)
Translates to: HSVHTATPRCHRHTH*IARLVLDPAGATWA
Trigger: CGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp GCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACCTCGGTaGCATCGCCACACACACTGCATCGCGCGCTTGGTGCTGGACCCT +
Preference number: 1 (lower is better)
Translates to: ASGRQRHSVHTATPR*HRHTHCIARLVLDP
Trigger: AGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp GCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACCTCGGTaGCATCGCCACACACACTGCATCGCGCGCTTGGTGCTGGACCTG +
Preference number: 1 (lower is better)
Translates to: ASGRQRHSVHTATPR*HRHTHCIARLVLDL
Trigger: CAGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATaGGGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTT +
Preference number: 1 (lower is better)
Translates to: GPNQPRPLRTECLIR*GWVGREPMLCCPPL
Trigger: AAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR GCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTaGCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGCTGTGC +
Preference number: 1 (lower is better)
Translates to: LPALGPNQPRPLRTE*LIRWGWVGREPMLC
Trigger: GCACAGCATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR GCA 90 bp GGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGG +
Preference number: 1 (lower is better)
Translates to: GGVSASGRDMLWMAH*RMPSNECSLRRDSR
Trigger: CCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR GCA 90 bp CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGCCTGCCTGCCTGCCTaGCTGCCTGCCTGCCTGCTTGCCTGTCTTACTTCCCTCCTTCCC +
Preference number: 1 (lower is better)
Translates to: LSVCLSVCLSACLPA*LPACLLACLTSLLP
Trigger: GGGAAGGAGGGAAGTAAGACAGGCAAGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACAGACAGACAGACAGACAGACAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp CTGTCTGTCTGTCTGTCTGTCTGTCTGCCTGCCTGCCTGCCTGCCTaGCTGCCTGCCTGCTTGCCTGTCTTACTTCCCTCCTTCCCTTCT +
Preference number: 1 (lower is better)
Translates to: LSVCLSVCLPACLPA*LPACLPVLLPSFPS
Trigger: AGAAGGGAAGGAGGGAAGTAAGACAGGCAAGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACAGACAGACAGACAGACAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 90 bp CAGGAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGG +
Preference number: 1 (lower is better)
Translates to: QEEKGGVSASGRDML*MAHCRMPSNECSLR
Trigger: CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR CCA 90 bp AAACACCTGCTGGATAAGGATCCCTTCCACGGCCCCTCGGGTTCCTaGAACATCCCCAGAGGCCACGGTCACAGCTCTCTGGACAGAAGC +
Preference number: 1 (lower is better)
Translates to: KHLLDKDPFHGPSGS*NIPRGHGHSSLDRS
Trigger: GCTTCTGTCCAGAGAGCTGTGACCGTGGCCTCTGGGGATGTTCCAGGAACCCGAGGGGCCGTGGAAGGGATCCTTATCCAGCAGGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp GTCATCAGGAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCAT +
Preference number: 1 (lower is better)
Translates to: VIRKRRVVSRPAGVT*SGWPTAGCRQMSAH
Trigger: ATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR TCA 90 bp TCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGAACAGGGTCGTaGCTAGCAGAGTCGTCCCCTACCTTGGCAAGCCCAGGTGCTGGA +
Preference number: 1 (lower is better)
Translates to: SLRRDSRSSLCRTGS*LAESSPTLASPGAG
Trigger: TCCAGCACCTGGGCTTGCCAAGGTAGGGGACGACTCTGCTAGTCACGACCCTGTTCTACATAGGGACGACCTGGAGTCCCTCCTCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CCA 90 bp CACTGCTGGCCCACTTTCTGCTCATCTCTACCAGGTATAGTGACCTaGGCTCCCTTGGCTCGGACCACTGGCTTTAGGCTGCTACCACTC +
Preference number: 1 (lower is better)
Translates to: HCWPTFCSSLPGIVT*APLARTTGFRLLPL
Trigger: GAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCACTATACCTGGTAGAGATGAGCAGAAAGTGGGCCAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp CGTGACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGAACAGGG +
Preference number: 1 (lower is better)
Translates to: RDMLWMAHCRMPSNE*SLRRDSRSSLCRTG
Trigger: CCCTGTTCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR TCA 90 bp CCAGAGGCCACGGTCACAGCTCTCTGGACAGAAGCTGCCATGGTCTaGATTCCGTTTCCAAGAGGAAGGTGCTGTGACTCCAAGTTGCCA +
Preference number: 1 (lower is better)
Translates to: PEATVTALWTEAAMV*IPFPRGRCCDSKLP
Trigger: TGGCAACTTGGAGTCACAGCACCTTCCTCTTGGAAACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGAGCTGTGACCGTGGCCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 90 bp TCCAAGCTGCTTTCCACGGACCAGTCCATCCTGGGAGTCCAGCTCTaGTCCTACCAAATGTGGGACTCCAGAAGAGCTTTGGAGGAGGGA +
Preference number: 1 (lower is better)
Translates to: SKLLSTDQSILGVQL*SYQMWDSRRALEEG
Trigger: TCCCTCCTCCAAAGCTCTTCTGGAGTCCCACATTTGGTAGGATCAGAGCTGGACTCCCAGGATGGACTGGTCCGTGGAAAGCAGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 90 bp CATCCCCAGAGGCCACGGTCACAGCTCTCTGGACAGAAGCTGCCATaGTCTGAATTCCGTTTCCAAGAGGAAGGTGCTGTGACTCCAAGT +
Preference number: 1 (lower is better)
Translates to: HPQRPRSQLSGQKLP*SEFRFQEEGAVTPS
Trigger: ACTTGGAGTCACAGCACCTTCCTCTTGGAAACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGAGCTGTGACCGTGGCCTCTGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 90 bp CAGAAAGCGGCCTTTCCAAGCTGCTTTCCACGGACCAGTCCATCCTaGGAGTCCAGCTCTGATCCTACCAAATGTGGGACTCCAGAAGAG +
Preference number: 1 (lower is better)
Translates to: QKAAFPSCFPRTSPS*ESSSDPTKCGTPEE
Trigger: CTCTTCTGGAGTCCCACATTTGGTAGGATCAGAGCTGGACTCCCAGGATGGACTGGTCCGTGGAAAGCAGCTTGGAAAGGCCGCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 90 bp TGGCTGCAAACCCTTTTACCCACTGAGCCATCTCAAAGGCCCAGCTaGAGAGTTCCCTTGGTGCTCTCCCCTACAGTCCCTGTGTTACTA +
Preference number: 1 (lower is better)
Translates to: WLQTLLPTEPSQRPS*RVPLVLSPTVPVLL
Trigger: TAGTAACACAGGGACTGTAGGGGAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAGTGGGTAAAAGGGTTTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 90 bp ATCCAACTCAGGTCTTCCATCTTGGCTGCAAACCCTTTTACCCACTaGGCCATCTCAAAGGCCCAGCTGGAGAGTTCCCTTGGTGCTCTC +
Preference number: 1 (lower is better)
Translates to: IQLRSSILAANPFTH*AISKAQLESSLGAL
Trigger: GAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAGTGGGTAAAAGGGTTTGCAGCCAAGATGGAAGACCTGAGTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp CCACTGGCTTTAGGCTGCTACCACTCCGGGCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACTTGTTGGGTGTATAAAACTCTCCCC +
Preference number: 1 (lower is better)
Translates to: PLALGCYHSGPCSSN*HWGLRTCWVYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAGCAGCCTAAAGCCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 90 bp AGAAGCTGCCATGGTCTGAATTCCGTTTCCAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGGCTTCTTAGGGGGCTTAGTCTTCAG +
Preference number: 1 (lower is better)
Translates to: RSCHGLNSVSKRKVL*LQVAIWLLRGLSLQ
Trigger: CTGAAGACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTTGGAAACGGAATTCAGACCATGGCAGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 90 bp GCTTTAGGCTGCTACCACTCCGGGCCTTGTTCTTCAAATTGCCACTaGGGTCTTCGAACTTGTTGGGTGTATAAAACTCTCCCCCAACCT +
Preference number: 1 (lower is better)
Translates to: ALGCYHSGPCSSNCH*GLRTCWVYKTLPQP
Trigger: AGGTTGGGGGAGAGTTTTATACACCCAACAAGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAGCAGCCTAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 90 bp GAGATCAGAGGACCACTTGCAGACCGAGTCACTCTTTCCACCATGTaGGTTTTGGGAATCCAACTCAGGTCTTCCATCTTGGCTGCAAAC +
Preference number: 1 (lower is better)
Translates to: EIRGPLADRVTLSTM*VLGIQLRSSILAAN
Trigger: GTTTGCAGCCAAGATGGAAGACCTGAGTTGGATTCCCAAAACTCACATGGTGGAAAGAGTGACTCGGTCTGCAAGTGGTCCTCTGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 90 bp TACCCACTGAGCCATCTCAAAGGCCCAGCTGGAGAGTTCCCTTGGTaGTCTCCCCTACAGTCCCTGTGTTACTATTATATGAACAAGTGT +
Preference number: 1 (lower is better)
Translates to: YPLSHLKGPAGEFPW*SPLQSLCYYYMNKC
Trigger: ACACTTGTTCATATAATAGTAACACAGGGACTGTAGGGGAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 90 bp TTTTACCCACTGAGCCATCTCAAAGGCCCAGCTGGAGAGTTCCCTTaGTGCTCTCCCCTACAGTCCCTGTGTTACTATTATATGAACAAG +
Preference number: 1 (lower is better)
Translates to: FYPLSHLKGPAGEFP*CSPLQSLCYYYMNK
Trigger: CTTGTTCATATAATAGTAACACAGGGACTGTAGGGGAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAGTGGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 90 bp GAGGACCACTTGCAGACCGAGTCACTCTTTCCACCATGTGAGTTTTaGGAATCCAACTCAGGTCTTCCATCTTGGCTGCAAACCCTTTTA +
Preference number: 1 (lower is better)
Translates to: EDHLQTESLFPPCEF*ESNSGLPSWLQTLL
Trigger: TAAAAGGGTTTGCAGCCAAGATGGAAGACCTGAGTTGGATTCCCAAAACTCACATGGTGGAAAGAGTGACTCGGTCTGCAAGTGGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp CGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACACCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 2 (lower is better)
Translates to: RPGGGRREVAAPVEGSGTPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...TGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CAA 90 bp CCTGGCGTGGGAGTCGAGTCTGCAGAGCAGGATTTGCAGCGGAGATaGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: PGVGVESAEQDLQRR*VPGRAAAVGKWQRQ
Trigger: CTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGACTCGACTCCCACGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR GCA 90 bp CGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTAGAGGAGCTGCAGGGTaGGGGGCCAGCAGGTTCACA +
Preference number: 2 (lower is better)
Translates to: RAAAVGKWQRQWKAAAQCRGAAG*GASRFT
Trigger: TGTGAACCTGCTGGCCCCGCACCCTGCAGCTCCTCT...ACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR CCA 90 bp CGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 2 (lower is better)
Translates to: RPGGGRREVAAPVEGSGTVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...TGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR CCA 90 bp ATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: IGPRPGGGRREVAAPVEGGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...GCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CAA 90 bp ACCGCAACACCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTaGGTGCTGGACCCTGCAGGGGCAACATGGGCGGCAACCCAGCCC +
Preference number: 2 (lower is better)
Translates to: TATPRCHRHTHCIAR*VLDPAGATWAATQP
Trigger: GGGCTGGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTTGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR TCA 90 bp GGAGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGACAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: GDWSPAGRRPSGSGSASGQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...TCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR GCA 90 bp CGGAGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 2 (lower is better)
Translates to: RRLVPGRAAAVGKWQRQWMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...CCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR CCA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR TCA 90 bp CACTGCATCGCGCGCTTGGTGCTGGACCCTGCAGGGGCAACATGGGCGGCAACCGCTGGAGACGCTCTTTaGGGCCAGAGTTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: HCIARLVLDPAGATWAATAGDAL*GQSCWW
Trigger: CCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGC...GGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CCA 90 bp GCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACCTCGGTGCCATCGCTCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 2 (lower is better)
Translates to: ASGRQRHSVHTATPRCHRSGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...GCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR CCA 90 bp GGAGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGACTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 2 (lower is better)
Translates to: GDWSPAGRRPSGSGSASGLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...TCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CAA 90 bp ACCGCAACACCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTaGGTGCTGGACCTGGCCGCCCCTCATTCCCAGCACTCAGTAGAG +
Preference number: 2 (lower is better)
Translates to: TATPRCHRHTHCIAR*VLDLAAPHSQHSVE
Trigger: CTCTACTGAGTGCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
3UTR-3UTR GCA 90 bp CCTGGAGGCAGCAGGAGCATCTCCAGAGGCCACTGGGGATCTCCTGCAGAGGTGGAGCCAATGCTGTGCTaGCCACCCCTTCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: PGGSRSISRGHWGSPAEVEPMLC*PPLPGP
Trigger: TGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTC...CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGATGCTCCTGCTGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR GCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAAGGGAGCCAATGCTGTaGTGCCCACCCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQREPML*CPPLPG
Trigger: CCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCT...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 2 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp TGCCATCGCCACACACACTGCATCGCGCGCTTGGTGCTGGACCCTGCAGGGGCACTGCCCACCCCTTCCTaGGCCACCTGTCATCAGGAA +
Preference number: 2 (lower is better)
Translates to: CHRHTHCIARLVLDPAGALPTPS*ATCHQE
Trigger: TTCCTGATGACAGGTGGCCCAGGAAGGGGTGGGCAG...TGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGAGCCAATGCTGTGCTaGCCACCCCTTCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGEPMLC*PPLPGP
Trigger: TGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTC...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGATCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 2 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGSGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACCTGCCCACCCCTTCCTaGGCCACCTGTCATCAGGAA +
Preference number: 2 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHLPTPS*ATCHQE
Trigger: TTCCTGATGACAGGTGGCCCAGGAAGGGGTGGGCAG...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGAGGGAGCCAATGCTGTaGTGCCCACCCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LISPGLSEQSASSDGAGWREPML*CPPLPG
Trigger: CCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCT...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp GCAGGAGCATCTCCAGAGGCCACTGGGGATCTCCTGCAGAGGTGGGGACAGGCAGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: AGASPEATGDLLQRWGQAGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...TGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGATGCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCGAGTGCCTCATCCGATaGGGCTGGGTGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGECLIR*GWVGRE
Trigger: CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTC...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 2 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 2 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR CAA 90 bp TCTTCAGGTGGGAGCCTGGGCTGGAGACGCTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAGGCTCCTCCAGTGCTTTTCTCTTGG +
Preference number: 2 (lower is better)
Translates to: SSGGSLGWRRSLRPE*LVGWLEAPPVLFSW
Trigger: CCAAGAGAAAAGCACTGGAGGAGCCTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCCCAGGCTCCCACCTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCAGGGAGCCAATGCTGTaGTGCCCACCCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGREPML*CPPLPG
Trigger: CCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCT...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGAAGATCAGGGCCATCTaGAAGCTGAGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEKIRAI*KLSPAG
Trigger: GCCTGCTGGACTCAGCTTGCAGATGGCCCTGATCTT...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 2 (lower is better)
Translates to: SAQASQNRVPHPMGLGGELWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp GCGGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTGCACACTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 2 (lower is better)
Translates to: AAVGKWQRQWKAAAQCAHSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...GTGTGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAGAGTGCCTCATCCGATaGGGCTGGGTGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PALGPNQPRPLRTECLIRECLIR*GWVGRE
Trigger: CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTC...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 2 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGAGCCAATGCTGTGCTaGCCACCCCTTCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: LLVLISPGLSEQSASSDGEPMLC*PPLPGP
Trigger: TGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTC...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACAGGGAGCCAATGCTGTaGTGCCCACCCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDREPML*CPPLPG
Trigger: CCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCT...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAAGGGAGCCAATGCTGTaGTGCCCACCCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PALGPNQPRPLRTECLIRREPML*CPPLPG
Trigger: CCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCT...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCTGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: QNLPALGPNQPRPLRTECWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAAAGATCAGGGCCATCTaGAAGCTGAGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGKIRAI*KLSPAG
Trigger: GCCTGCTGGACTCAGCTTGCAGATGGCCCTGATCTT...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CTTGGTGCTGGACCTGGCCGCCCCTCATTCCCAGCACTCAGTAGAGGGCACAGTAAGATCAGGGCCATCTaGAAGCTGAGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: LGAGPGRPSFPALSRGHSKIRAI*KLSPAG
Trigger: GCCTGCTGGACTCAGCTTGCAGATGGCCCTGATCTT...ACTGTGCCCTCTACTGAGTGCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
3UTR-3UTR GCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGACCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 2 (lower is better)
Translates to: PALGPNQPRPLRTECLIRPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 2 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR CAA 90 bp CCCACTTTCTGCTCATCTCTACCAGGTATAGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTTAGGCTGCTACCACTCCGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: PTFCSSLPGIVTWAP*ARTTGFRLLPLRAL
Trigger: CAAGGCCCGGAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCACTATACCTGGTAGAGATGAGCAGAAAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR TCA 90 bp AAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTCAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: KRRVVSRPAGVTCSGWPTQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...AGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATTGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: QLLVLISPGLSEQSASSDWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 2 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGTCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 2 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRSGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR CAA 90 bp CAAGGGGCTTTCTCCCTTTCCGGGACTGGTTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGCTATGCAGGCGGCTGTACCGCTCCA +
Preference number: 2 (lower is better)
Translates to: QGAFSLSGTGLGPHL*GSRPGCYAGGCTAP
Trigger: TGGAGCGGTACAGCCGCCTGCATAGCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAGAAAGCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 2 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGACCGCAACACCTCGGTaGCATCGCCACACACACTGC +
Preference number: 2 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRTATPR*HRHTHC
Trigger: GCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGAGTGCCTCATCCGATaGGGCTGGGTGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: FQDMGWPCISTKIRAICKECLIR*GWVGRE
Trigger: CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGAGCCAATGCTGTGCTaGCCACCCCTTCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: FQDMGWPCISTKIRAICKEPMLC*PPLPGP
Trigger: TGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGTGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: FQDMGWPCISTKIRAICKWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGATGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAAAGATCAGGGCCATCTaGAAGCTGAGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: PALGPNQPRPLRTECLIRKIRAI*KLSPAG
Trigger: GCCTGCTGGACTCAGCTTGCAGATGGCCCTGATCTT...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGCTCATCCGATGGGGCTaGGTGGGGAGGGAGCCAATG +
Preference number: 2 (lower is better)
Translates to: FQDMGWPCISTKIRAICKLIRWG*VGREPM
Trigger: CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAG...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR CAA 90 bp CCCTTGGCTCGGACCACTGGCTTTAGGCTGCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTGGGGTCTTCGAACTTGTTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: PLARTTGFRLLPLRA*FFKLPLGSSNLLGV
Trigger: TACACCCAACAAGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAAGGGAGCCAATGCTGTaGTGCCCACCCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQREPML*CPPLPG
Trigger: CCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCT...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 2 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAACTCATCCGATGGGGCTaGGTGGGGAGGGAGCCAATG +
Preference number: 2 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQLIRWG*VGREPM
Trigger: CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAG...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGCTGCCCACCCCTTCCTaGGCCACCTGTCATCAGGAA +
Preference number: 2 (lower is better)
Translates to: FQDMGWPCISTKIRAICKLPTPS*ATCHQE
Trigger: TTCCTGATGACAGGTGGCCCAGGAAGGGGTGGGCAG...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGTGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 2 (lower is better)
Translates to: QNLPALGPNQPRPLRTECMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCTCATCCGATGGGGCTaGGTGGGGAGGGAGCCAATG +
Preference number: 2 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLLIRWG*VGREPM
Trigger: CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAG...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATGAGTGCCTCATCCGATaGGGCTGGGTGGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHECLIR*GWVGRE
Trigger: CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTC...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGACTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 2 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTCATCCGATGGGGCTaGGTGGGGAGGGAGCCAATG +
Preference number: 2 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHLIRWG*VGREPM
Trigger: CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAG...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 2 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp CACTTCTTGGATCTTCCTGACTCAAACACCTGCTGGATAAGGATCCCTTCCACGGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 2 (lower is better)
Translates to: HFLDLPDSNTCWIRIPSTVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGGGAGCCAATGCTGTaGTGCCCACCCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQREPML*CPPLPG
Trigger: CCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCT...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAATGGGGAGGGAGCCAATaGTGTGCTGCCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQWGGSQ*CAAHPF
Trigger: GAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCA...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGAAGATCAGGGCCATCTaGAAGCTGAGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLKIRAI*KLSPAG
Trigger: GCCTGCTGGACTCAGCTTGCAGATGGCCCTGATCTT...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR TCA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGACTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR GCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGAGCCAATGCTGTGCTaGCCACCCCTTCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKEPMLC*PPLPGP
Trigger: TGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTC...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATAAGATCAGGGCCATCTaGAAGCTGAGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHKIRAI*KLSPAG
Trigger: GCCTGCTGGACTCAGCTTGCAGATGGCCCTGATCTT...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAACTCATCCGATGGGGCTaGGTGGGGAGGGAGCCAATG +
Preference number: 2 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKLIRWG*VGREPM
Trigger: CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAG...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR CAA 90 bp CTTTTACCCACTGAGCCATCTCAAAGGCCCAGCTGGAGAGTTCCCTaGGTGCTCTCCCCTACAGTCCCTGTGTTACTATTATATGAACAA +
Preference number: 2 (lower is better)
Translates to: LLPTEPSQRPSWRVP*VLSPTVPVLLLYEQ
Trigger: TTGTTCATATAATAGTAACACAGGGACTGTAGGGGAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAGTGGGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 2 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR TCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAACAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR GCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAAAGATCAGGGCCATCTaGAAGCTGAGTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKKIRAI*KLSPAG
Trigger: GCCTGCTGGACTCAGCTTGCAGATGGCCCTGATCTT...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR-3UTR TCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAACAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGT +
Preference number: 2 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKQMSAH*GGTPGR
Trigger: ACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTG...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR TCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAACAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR CCA 72 bp AGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTGCA +
Preference number: 3 (lower is better)
Translates to: RLVPGRAAAVGK*QRQWKAAAQCA
Trigger: TGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CCA 72 bp ATCGCGCGCTTGGTGCTGGACCCTGCAGGGGCAACATaGGCGGCAACCCAGCCCGTGTCCTGCTCACCCCAC +
Preference number: 3 (lower is better)
Translates to: IARLVLDPAGAT*AATQPVSCSPH
Trigger: GTGGGGTGAGCAGGACACGGGCTGGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp GGTGCCATCGCCACACACACTGCATCGCGCGCTTGGTaGTGGACCCTGCAGGGGCAACATGGGCGGCAACCC +
Preference number: 3 (lower is better)
Translates to: GAIATHTASRAW*WTLQGQHGRQP
Trigger: GGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp GCCATCGCCACACACACTGCATCGCGCGCTTGGTGCTaGACCCTGCAGGGGCAACATGGGCGGCAACCCAGC +
Preference number: 3 (lower is better)
Translates to: AIATHTASRAWC*TLQGQHGRQPS
Trigger: GCTGGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp CACACCGCAACACCTCGGTGCCATCGCCACACACACTaGATCGCGCGCTTGGTGCTGGACCCTGCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: HTATPRCHRHTH*IARLVLDPAGA
Trigger: TGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp GGTGCCATCGCCACACACACTGCATCGCGCGCTTGGTaGTGGACCTGGCCGCCCCTCATTCCCAGCACTCAG +
Preference number: 3 (lower is better)
Translates to: GAIATHTASRAW*WTWPPLIPSTQ
Trigger: CTGAGTGCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
3UTR CCA 72 bp GGGTGGCTCGAGGCTCCTCCAGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTACCGCGGCCTTGGGAC +
Preference number: 3 (lower is better)
Translates to: GWLEAPPVLFSW*GVWVAVPRPWD
Trigger: GTCCCAAGGCCGCGGTACTGCCACCCAGACCCCCCACCAAGAGAAAAGCACTGGAGGAGCCTCGAGCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CAA 90 bp CCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTTGGTGCTGGACCCTGCAGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 3 (lower is better)
Translates to: PRCHRHTHCIARLVLDPAVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...TGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp GAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTaGACACCGCAACACCTCGGTGCCATCGCCACACAC +
Preference number: 3 (lower is better)
Translates to: EVAAPVEGSGTV*TPQHLGAIATH
Trigger: GTGTGTGGCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR GCA 72 bp ACTAGCAGAGTCGTCCCCTACCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGTGGGTACAGCTTCGCC +
Preference number: 3 (lower is better)
Translates to: TSRVVPYLGKPR*WTGPRGGYSFA
Trigger: GGCGAAGCTGTACCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAGGTAGGGGACGACTCTGCTAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CCA 72 bp TCTGCAGGTAGCTCCGGGGGCCTGGACACCTCAGGCTaGGACAGGTTCTGTTGGACTCTGCCCTGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: SAGSSGGLDTSG*DRFCWTLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAGCCTGAGGTGTCCAGGCCCCCGGAGCTACCTGCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR CAA 90 bp CGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: REVAAPVEGSGTVCTPQHGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...GTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 72 bp AGTCTTCAGGTGGGAGCCTGGGCTGGAGACGCTCTTTaGGGCCAGAGTTGCTGGTGGGGTGGCTCGAGGCTC +
Preference number: 3 (lower is better)
Translates to: SLQVGAWAGDAL*GQSCWWGGSRL
Trigger: GAGCCTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCCCAGGCTCCCACCTGAAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 72 bp CCAGGTGGAAGGCCCGGGGACAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGCACACGGCACACTCAT +
Preference number: 3 (lower is better)
Translates to: PGGRPGDSRHNR*AHLRRGTRHTH
Trigger: ATGAGTGTGCCGTGTGCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCTGTCCCCGGGCCTTCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp ACCTCAGGCTGGGACAGGTTCTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTCCAGAGGCCACTGGGG +
Preference number: 3 (lower is better)
Translates to: TSGWDRFCWTLP*RQQEHLQRPLG
Trigger: CCCCAGTGGCCTCTGGAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAGCCTGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR GCA 72 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTaGCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCA +
Preference number: 3 (lower is better)
Translates to: LGPNQPRPLRTE*LIRWGWVGREP
Trigger: TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR GCA 72 bp TGGACACCTCAGGCTGGGACAGGTTCTGTTGGACTCTaGCCTGGAGGCAGCAGGAGCATCTCCAGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: WTPQAGTGSVGL*PGGSRSISRGH
Trigger: GTGGCCTCTGGAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAGCCTGAGGTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR GCA 72 bp TGTCTGTCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTaGCTGCTTGCCTGTCTTACTTCCCTCCTTCCCTTC +
Preference number: 3 (lower is better)
Translates to: CLSACLPACLPA*LLACLTSLLPF
Trigger: GAAGGGAAGGAGGGAAGTAAGACAGGCAAGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp TGTCTGTCTGTCTGCCTGCCTGCCTGCCTGCCTGCCTaGCTGCCTGCTTGCCTGTCTTACTTCCCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: CLSVCLPACLPA*LPACLSYFPPS
Trigger: GGAAGGAGGGAAGTAAGACAGGCAAGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGACAGACAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp GAGGGGAGCAGGGGTCAGAAAGCGGCCTTTCCAAGCTaGTTTCCACGGACCAGTCCATCCTGGGAGTCCAGC +
Preference number: 3 (lower is better)
Translates to: EGSRGQKAAFPS*FPRTSPSWESS
Trigger: GCTGGACTCCCAGGATGGACTGGTCCGTGGAAAGCAGCTTGGAAAGGCCGCTTTCTGACCCCTGCTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp AAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATGCCGTCAAATGAGTGC +
Preference number: 3 (lower is better)
Translates to: KGGVSASGRDML*MAHCRMPSNEC
Trigger: GCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CAA 90 bp CGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACTCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: REVAAPVEGSGTVCTPQHSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...GTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR-3UTR CAA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCTCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CAA 90 bp CGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 3 (lower is better)
Translates to: REVAAPVEGSGTVCTPQHLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...GTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp TCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAGTGCTCATTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: SASGRDMLWMAH*RMPSNECSLRR
Trigger: CCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR GCA 72 bp AAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCAGGATGCCGTCAAATG +
Preference number: 3 (lower is better)
Translates to: KRRVVSRPAGVT*SGWPTAGCRQM
Trigger: CATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR CCA 72 bp GTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGTCAAATGAGTGCTCAT +
Preference number: 3 (lower is better)
Translates to: VVSRPAGVTCSG*PTAGCRQMSAH
Trigger: ATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR CCA 72 bp TGGCACACGGCACACTCATCCTCGTTCTGGTTAACCTaGGGCTCACTGGGGAGGGATGGAAGGGGAGGAACC +
Preference number: 3 (lower is better)
Translates to: WHTAHSSSFWLT*GSLGRDGRGGT
Trigger: GGTTCCTCCCCTTCCATCCCTCCCCAGTGAGCCCCAGGTTAACCAGAACGAGGATGAGTGTGCCGTGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp CCTGGGCTCCCTTGGCTCGGACCACTGGCTTTAGGCTaGTACCACTCCGGGCCTTGTTCTTCAAATTGCCAC +
Preference number: 3 (lower is better)
Translates to: PGLPWLGPLALG*YHSGPCSSNCH
Trigger: GTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CAA 90 bp AAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTTCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: KRRVVSRPAGVTCSGWPTSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...AGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR TCA 72 bp CATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCT +
Preference number: 3 (lower is better)
Translates to: HALDGPLQDAVK*VLIEEGLQVVP
Trigger: AGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR TCA 72 bp AGGGACTCCAGGTCGTCCCTATGTAGAACAGGGTCGTaGCTAGCAGAGTCGTCCCCTACCTTGGCAAGCCCA +
Preference number: 3 (lower is better)
Translates to: RDSRSSLCRTGS*LAESSPTLASP
Trigger: TGGGCTTGCCAAGGTAGGGGACGACTCTGCTAGTCACGACCCTGTTCTACATAGGGACGACCTGGAGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
3UTR CCA 72 bp TTGCCATCTGGCTTCTTAGGGGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACGCTCTTTGAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: LPSGFLGGLVFR*EPGLETLFEAR
Trigger: TCTGGCCTCAAAGAGCGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCCCCCTAAGAAGCCAGATGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCCAGGTCGTCCCTATGT +
Preference number: 3 (lower is better)
Translates to: LWMAHCRMPSNE*SLRRDSRSSLC
Trigger: ACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR GCA 72 bp CCCAGAGGCCACGGTCACAGCTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTTTCCAAGAGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: PRGHGHSSLDRS*HGLNSVSKRKV
Trigger: CACCTTCCTCTTGGAAACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGAGCTGTGACCGTGGCCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp TTGGGACCAGCAAGGGGCTTTCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTTGGGAAGCCGTCCAGG +
Preference number: 3 (lower is better)
Translates to: LGPARGFLPFRD*FRSTSFGKPSR
Trigger: CCTGGACGGCTTCCCAAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAGAAAGCCCCTTGCTGGTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp ACCCTTTTACCCACTGAGCCATCTCAAAGGCCCAGCTaGAGAGTTCCCTTGGTGCTCTCCCCTACAGTCCCT +
Preference number: 3 (lower is better)
Translates to: TLLPTEPSQRPS*RVPLVLSPTVP
Trigger: AGGGACTGTAGGGGAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAGTGGGTAAAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CAA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 3 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 72 bp TGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGTCCCTATGTAGAACAG +
Preference number: 3 (lower is better)
Translates to: WPTAGCRQMSAH*GGTPGRPYVEQ
Trigger: CTGTTCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR TCA 72 bp CAGGGTTTCAAGTCGCGTGAGTGGGACTGTAAATTCTaGGTTCTGGATGTCCCGAGGGGAGCAGGGGTCAGA +
Preference number: 3 (lower is better)
Translates to: QGFKSREWDCKF*VLDVPRGAGVR
Trigger: TCTGACCCCTGCTCCCCTCGGGACATCCAGAACTCAGAATTTACAGTCCCACTCACGCGACTTGAAACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp AGGCCACGGTCACAGCTCTCTGGACAGAAGCTGCCATaGTCTGAATTCCGTTTCCAAGAGGAAGGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: RPRSQLSGQKLP*SEFRFQEEGAV
Trigger: CACAGCACCTTCCTCTTGGAAACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGAGCTGTGACCGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp GCCTTTCCAAGCTGCTTTCCACGGACCAGTCCATCCTaGGAGTCCAGCTCTGATCCTACCAAATGTGGGACT +
Preference number: 3 (lower is better)
Translates to: AFPSCFPRTSPS*ESSSDPTKCGT
Trigger: AGTCCCACATTTGGTAGGATCAGAGCTGGACTCCCAGGATGGACTGGTCCGTGGAAAGCAGCTTGGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CAA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGTCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
3UTR-3UTR CAA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 3 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 72 bp ACGGTCACAGCTCTCTGGACAGAAGCTGCCATGGTCTaGATTCCGTTTCCAAGAGGAAGGTGCTGTGACTCC +
Preference number: 3 (lower is better)
Translates to: TVTALWTEAAMV*IPFPRGRCCDS
Trigger: GGAGTCACAGCACCTTCCTCTTGGAAACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGAGCTGTGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp ATGCACTTCTTGGATCTTCCTGACTCAAACACCTGCTaGATAAGGATCCCTTCCACGGCCCCTCGGGTTCCT +
Preference number: 3 (lower is better)
Translates to: MHFLDLPDSNTC*IRIPSTAPRVP
Trigger: AGGAACCCGAGGGGCCGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAGTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR-3UTR CAA 90 bp GAGTTTTGGGAATCCAACTCAGGTCTTCCATCTTGGCTGCAAACCCTTTTACCCCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: EFWESNSGLPSWLQTLLPLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...GGGTAAAAGGGTTTGCAGCCAAGATGGAAGACCTGAGTTGGATTCCCAAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 72 bp GGTGCTCTCCCCTACAGTCCCTGTGTTACTATTATATaGACAAGTGTCTCTTGGCAGAGCCCTCCCCTGACC +
Preference number: 3 (lower is better)
Translates to: GALPYSPCVTII*TSVSWQSPPLT
Trigger: GGTCAGGGGAGGGCTCTGCCAAGAGACACTTGTTCATATAATAGTAACACAGGGACTGTAGGGGAGAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp CTGAGCCATCTCAAAGGCCCAGCTGGAGAGTTCCCTTaGTGCTCTCCCCTACAGTCCCTGTGTTACTATTAT +
Preference number: 3 (lower is better)
Translates to: LSHLKGPAGEFP*CSPLQSLCYYY
Trigger: ATAATAGTAACACAGGGACTGTAGGGGAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR TCA 72 bp CATGGTCTGAATTCCGTTTCCAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGGCTTCTTAGGGGGCTT +
Preference number: 3 (lower is better)
Translates to: HGLNSVSKRKVL*LQVAIWLLRGL
Trigger: AAGCCCCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTTGGAAACGGAATTCAGACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp GTTGTCCTGCTTCATGATGGGGGAGGGTGTATCATCTaGATAACCAAGCTAAGCCTGTCTGTCTGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: VVLLHDGGGCII*ITKLSLSVCLS
Trigger: AGACAGACAGACAGACAGGCTTAGCTTGGTTATCCAGATGATACACCCTCCCCCATCATGAAGCAGGACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp TTAGGCTGCTACCACTCCGGGCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACTTGTTGGGTGTATAAA +
Preference number: 3 (lower is better)
Translates to: LGCYHSGPCSSN*HWGLRTCWVYK
Trigger: TTTATACACCCAACAAGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAGCAGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp AGTTTTGGGAATCCAACTCAGGTCTTCCATCTTGGCTaGAAACCCTTTTACCCACTGAGCCATCTCAAAGGC +
Preference number: 3 (lower is better)
Translates to: SFGNPTQVFHLG*KPFYPLSHLKG
Trigger: GCCTTTGAGATGGCTCAGTGGGTAAAAGGGTTTGCAGCCAAGATGGAAGACCTGAGTTGGATTCCCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp TGCTACCACTCCGGGCCTTGTTCTTCAAATTGCCACTaGGGTCTTCGAACTTGTTGGGTGTATAAAACTCTC +
Preference number: 3 (lower is better)
Translates to: CYHSGPCSSNCH*GLRTCWVYKTL
Trigger: GAGAGTTTTATACACCCAACAAGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR CCA 72 bp TTGCAGACCGAGTCACTCTTTCCACCATGTGAGTTTTaGGAATCCAACTCAGGTCTTCCATCTTGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: LQTESLFPPCEF*ESNSGLPSWLQ
Trigger: TTGCAGCCAAGATGGAAGACCTGAGTTGGATTCCCAAAACTCACATGGTGGAAAGAGTGACTCGGTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
3UTR GCA 72 bp ACTTGTTGGGTGTATAAAACTCTCCCCCAACCTGAATaGACTTCTTGGATCTTCCTGACTCAAACACCTGCT +
Preference number: 3 (lower is better)
Translates to: TCWVYKTLPQPE*TSWIFLTQTPA
Trigger: AGCAGGTGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTTTTATACACCCAACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR GCA 90 bp ATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IGPRPGGGRREVAAPVEGGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...GCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
3UTR CAA 72 bp CCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTaGGTGCTGGACCTGGCCGCCCCTCATTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PRCHRHTHCIAR*VLDLAAPHSQH
Trigger: GTGCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR GCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCCACCGCGATCTCGGTaGGGTGCAGCCTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSPPRSR*GAASAD
Trigger: GTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGG...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGRELGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGRERAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGCTTGGTGCTGGACCTaGCCGCCCCTCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRAWCWT*PPLIPS
Trigger: GCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAGC...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGCTTGGTGCTGGACCTaGCCGCCCCTCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSAWCWT*PPLIPS
Trigger: GCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAGC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTAAGTGGCAGCGCCAGTaGAAGGCAGCGGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPKWQRQ*KAAAQC
Trigger: ACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTT...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPAAVGK*QRQWKA
Trigger: TGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGC...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEAAVGK*QRQWKA
Trigger: TGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGC...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GCTGGACCCTGCAGGGGCAACATGGGCGGCAACCCAGCCCGTGTCCTGCTCACCCTCCTGAGGAGGGCTTaGGACCACTCCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AGPCRGNMGGNPARVLLTLLRRA*DHSLAG
Trigger: TCCAGCCAAGGAGTGGTCCCAAGCCCTCCTCAGGAG...GGTGAGCAGGACACGGGCTGGGTTGCCGCCCATGTTGCCCCTGCAGGGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTTGCTCATCTCTACCCTaGGCTCCCTTGGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPCSSLP*APLART
Trigger: GGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCA...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGAGAGGAGCTGCAGGGTaGGGGGCCAGCAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRRGAAG*GASRFT
Trigger: TGTGAACCTGCTGGCCCCGCACCCTGCAGCTCCTCT...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTGAAAGGCACTGTCTATaGCCACCGCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPERHCL*PPRSRC
Trigger: GCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTC...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGTCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGRESGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGGCTGGAGACGCTCTTTaGGGCCAGAGTTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREAGDAL*GQSCWW
Trigger: CCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGC...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCSRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSSRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGAGGAGCTGCAGGGTaGGGGGCCAGCAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPRGAAG*GASRFT
Trigger: TGTGAACCTGCTGGCCCCGCACCCTGCAGCTCCTCT...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGACTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGRESGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACCTCGGTGCCATCGCTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ASGRQRHSVHTATPRCHRSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...GCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGAAGTGGCAGCGCCAGTaGAAGGCAGCGGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRKWQRQ*KAAAQC
Trigger: ACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTT...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVAAVGK*QRQWKA
Trigger: TGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGC...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGESRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPSRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGCCACCGCGATCTCGGTaGGGTGCAGCCTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVPPRSR*GAASAD
Trigger: GTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGG...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACCTCGGTGCCATCGCTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: ASGRQRHSVHTATPRCHRWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...GCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131028.8
ENSMUST00000143735.8
CDS-3UTR GCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGAGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGACCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: GDWSPAGRRPSGSGSASGPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...TCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR GCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCCTCCAGCAGAGGAGCTaGAGGGTGCGGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGLQQRS*RVRGQQ
Trigger: CTGCTGGCCCCGCACCCTGCAGCTCCTCTGCTGGAG...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGACCGCAACACCTCGGTaGCATCGCCACACACACTGC +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGETATPR*HRHTHC
Trigger: GCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAACCGCAACACCTCGGTaGCATCGCCACACACACTGC +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQTATPR*HRHTHC
Trigger: GCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp AGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SGRDMLWMAHCRMPSNECLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...GCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGAGGCCACTGGGGATCTCCTGCAGAGGTGGGGACAGGCAAGCCAGGTGGAAGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: PEATGDLLQRWGQASQVEGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...TTCCACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGGCCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCTTGGTGCTGGACCTaGCCGCCCCTCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVAWCWT*PPLIPS
Trigger: GCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAGC...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGCTTGGTGCTGGACCTaGCCGCCCCTCATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWAWCWT*PPLIPS
Trigger: GCTGGGAATGAGGGGCGGCCAGGTCCAGCACCAAGC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAAGTGGCAGCGCCAGTaGAAGGCAGCGGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPKWQRQ*KAAAQC
Trigger: ACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTT...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGAAVGK*QRQWKA
Trigger: TGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGC...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCTACCCTGGGCTCCCTTaGCTCGGACCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCYPGLP*LGPLAL
Trigger: TAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTA...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140636.8
ENSMUST00000148469.8
CDS-3UTR CCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGTACCCTGGGCTCCCTTaGCTCGGACCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRYPGLP*LGPLAL
Trigger: TAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTA...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGCTCATCTCTACCCTaGGCTCCCTTGGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQCSSLP*APLART
Trigger: GGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCA...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCTGGAGACGCTCTTTaGGGCCAGAGTTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGAGDAL*GQSCWW
Trigger: CCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGC...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGCTCCAGCAGAGGAGCTaGAGGGTGCGGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWLQQRS*RVRGQQ
Trigger: CTGCTGGCCCCGCACCCTGCAGCTCCTCTGCTGGAG...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGAAAGGCACTGTCTATaGCCACCGCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEERHCL*PPRSRC
Trigger: GCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTC...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGAAAGGCACTGTCTATaGCCACCGCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQERHCL*PPRSRC
Trigger: GCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTC...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SGRDMLWMAHCRMPSNECAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...GCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGAGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGACCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: GDWSPAGRRPSGSGSASGPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...TCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLIDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWAAVGK*QRQWKA
Trigger: TGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGC...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAGCGGCCGTCGGGAAGTaGCAGCGCCAGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRAAVGK*QRQWKA
Trigger: TGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGC...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TGCCATCGCCACACACACTGCATCGCGCGCTTGGTGCTGGACCCTGCAGGGGCATCCTGGGACTTGATCTaGAGAGGTCTCCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CHRHTHCIARLVLDPAGASWDLI*RGLLRR
Trigger: CCTCCTCAGGAGACCTCTCCAGATCAAGTCCCAGGA...TGCCCCTGCAGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR CCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGATGCTCATCTCTACCCTaGGCTCCCTTGGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGCSSLP*APLART
Trigger: GGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCA...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGCTGGAGACGCTCTTTaGGGCCAGAGTTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWAGDAL*GQSCWW
Trigger: CCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWSRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGCAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGCCACCGCGATCTCGGTaGGGTGCAGCCTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWPPRSR*GAASAD
Trigger: GTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGG...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCCACCGCGATCTCGGTaGGGTGCAGCCTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAPPRSR*GAASAD
Trigger: GTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAACTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTGCTGGCCCACTTTCTaGTCATCTCTACCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGECWPTF*SSLPWA
Trigger: AGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCA...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCTGGCCCACTTTCTaGTCATCTCTACCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHCWPTF*SSLPWA
Trigger: AGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCA...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140636.8
ENSMUST00000148469.8
CDS-3UTR CCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGAAAGGCACTGTCTATaGCCACCGCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGERHCL*PPRSRC
Trigger: GCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTC...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GCAGGAGCATCTCCAGAGGCCACTGGGGATCTCCTGCAGAGGTGGGGACAGGCAGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: AGASPEATGDLLQRWGQAGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...TGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGATGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGTACCCTGGGCTCCCTTaGCTCGGACCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMYPGLP*LGPLAL
Trigger: TAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTA...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGTGCTCATCTCTACCCTaGGCTCCCTTGGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVCSSLP*APLART
Trigger: GGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCA...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCCATCAGAGCTGGCTTTaGGCTCCCTGGATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSHQSWL*APWMGP
Trigger: GGGGCCCATCCAGGGAGCTCAAAGCCAGCTCTGATG...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR TCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCTGGAGAGGTCTCCTaGGGAGGGCTTGGGACCACT +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGSGEVS*GGLGTT
Trigger: AGTGGTCCCAAGCCCTCCTCAGGAGACCTCTCCAGA...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR GCA 90 bp AGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SGRDMLWMAHCRMPSNECWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...GCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TCGGTGCCATCGCCACACACACTGCATCGCGCGCTTGGTGCTGGACCTGGCCGCTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: SVPSPHTLHRALGAGPGRSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...GCGGCCAGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR GCA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp AGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGRDMLWMAHCRMPSNECGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...GCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGAGAGGAGCTGCAGGGTaGGGGGCCAGCAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWRGAAG*GASRFT
Trigger: TGTGAACCTGCTGGCCCCGCACCCTGCAGCTCCTCT...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCACCGCAACACCTCGGTaGCATCGCCACACACACTGC +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGTATPR*HRHTHC
Trigger: GCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MAHCRMPSNECSLRRDSRAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...CCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLIAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: KRRVVSRPAGVTCSGWPTVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...AGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: EKGGVSASGRDMLWMAHCDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...GCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGSGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGTACCCTGGGCTCCCTTaGCTCGGACCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWYPGLP*LGPLAL
Trigger: TAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTA...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGASRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGACAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGQMSAH*GGTPGR
Trigger: ACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTG...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAACCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGACCGCAACACCTCGGTaGCATCGCCACACACACTGC +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWTATPR*HRHTHC
Trigger: GCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCACCGCAACACCTCGGTaGCATCGCCACACACACTGC +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECTATPR*HRHTHC
Trigger: GCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGRELPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLIGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCACTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGELQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGEDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGACAGGCAAGCCAGGTaGAAGGCCCGGGGACAGCCG +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKDRQAR*KARGQP
Trigger: CGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCTGTC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGADLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTAAGTGGCAGCGCCAGTaGAAGGCAGCGGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAKWQRQ*KAAAQC
Trigger: ACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTT...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGELLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: SAQASQNRVPHPMGLGGENSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: RPLRTECLIRWGWVGREPNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGCAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVQMSAH*GGTPGR
Trigger: ACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTG...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWQMSAH*GGTPGR
Trigger: ACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTG...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGACCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATACCGCAACACCTCGGTaGCATCGCCACACACACTGC +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDTATPR*HRHTHC
Trigger: GCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGT...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000105395.9
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAACTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PRPLRTECLIRWGWVGREGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCCCTGGATGGGCCCCTaGTTTTCTCTGAAGCTGACC +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGPWMGP*FSLKLT
Trigger: GGTCAGCTTCAGAGAAAACCAGGGGCCCATCCAGGG...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCCCTGGATGGGCCCCTaGTTTTCTCTGAAGCTGACC +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAPWMGP*FSLKLT
Trigger: GGTCAGCTTCAGAGAAAACCAGGGGCCCATCCAGGG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATACCCTGGGCTCCCTTaGCTCGGACCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRYPGLP*LGPLAL
Trigger: TAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTA...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGACTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGCATCAGAGCTGGCTTTaGGCTCCCTGGATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKHQSWL*APWMGP
Trigger: GGGGCCCATCCAGGGAGCTCAAAGCCAGCTCTGATG...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCTCCAGCAGAGGAGCTaGAGGGTGCGGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGLQQRS*RVRGQQ
Trigger: CTGCTGGCCCCGCACCCTGCAGCTCCTCTGCTGGAG...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLILWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCTGGATGGCCCACTaGAGGATGCCGTCAAATGAG +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECLWMAH*RMPSNE
Trigger: CTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCTGCTGGCCCACTTTCTaGTCATCTCTACCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLICWPTF*SSLPWA
Trigger: AGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCA...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTGCTGGCCCACTTTCTaGTCATCTCTACCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGCWPTF*SSLPWA
Trigger: AGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGAAAGGCACTGTCTATaGCCACCGCGATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDERHCL*PPRSRC
Trigger: GCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTC...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLIVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SGRDMLWMAHCRMPSNECLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...GCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLIGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGTCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKSGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
3UTR CAA 72 bp TGCTCATCTCTACCAGGTATAGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTTAGGCTGCTACCACTC +
Preference number: 4 (lower is better)
Translates to: CSSLPGIVTWAP*ARTTGFRLLPL
Trigger: GAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCACTATACCTGGTAGAGATGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR TCA 90 bp ATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: MAHCRMPSNECSLRRDSRKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...CCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp AGCGGGCGTGACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGRDMLWMAHCRMPSNECLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...GCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGACAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRQMSAH*GGTPGR
Trigger: ACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTG...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAQMSAH*GGTPGR
Trigger: ACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGCAAATGAGTGCTCATTaGGGAGGGACTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWQMSAH*GGTPGR
Trigger: ACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTG...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCCAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGCAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCCACCGCGATCTCGGTaGGGTGCAGCCTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGPPRSR*GAASAD
Trigger: GTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGG...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: PLRTECLIRWGWVGREPMPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCTTGGCAAGCCCAGGTaGTGGACGGGGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLLGKPR*WTGPRG
Trigger: ACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCCAAG...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: LISPGLSEQSASSDGAGWLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGCAGTACCGCGGCCTTaGGACCAGCAAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQAVPRP*DQQGAF
Trigger: GAAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGC...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAACCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGAACCCCACACTGCTaGCCCACTTTCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDGTPHC*PTFCSS
Trigger: AGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCC...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGAGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQSRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLIPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCAGAGGAGCTGCAGGGTaGGGGGCCAGCAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGRGAAG*GASRFT
Trigger: TGTGAACCTGCTGGCCCCGCACCCTGCAGCTCCTCT...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAATGCCGTCAAATGAGTaGTCATTGAGGAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRMPSNE*SLRRDS
Trigger: GGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAATCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGCTTAGTCTTCAGGTaGGAGCCTGGGCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQGLVFR*EPGLET
Trigger: CGTCTCCAGCCCAGGCTCCCACCTGAAGACTAAGCC...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: MAHCRMPSNECSLRRDSRLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...CCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TCCAGCAGAGGAGCTGCAGGGTGCGGGGCCAGCAGGTTCACATATGTGACAGCAGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SSRGAAGCGASRFTYVTAGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...TGCTGTCACATATGTGAACCTGCTGGCCCCGCACCCTGCAGCTCCTCTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGTGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAGGCAAGCCCAGGTGCTaGACGGGGCCCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQGKPRC*TGPRGG
Trigger: CCCACCTCTGGGCCCCGTCCAGCACCTGGGCTTGCC...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGTCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLSGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR TCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCGCTGGAGACGCTCTTTaGGGCCAGAGTTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGAGDAL*GQSCWW
Trigger: CCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGC...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLILLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: CQLLVLISPGLSEQSASSNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGSRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CACCTCAGGCTGGGACAGGTTCTGTTGGACTCTGCCCTGGAGGCAGCAGGAGCACCTAATATGCATCCTTaGAAACTTCCAAGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HLRLGQVLLDSALEAAGAPNMHP*KLPRKS
Trigger: GCTCTTTCTTGGAAGTTTTCAAGGATGCATATTAGG...TGCTCCTGCTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAGCCTGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR GCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLISLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCCAGCGGGCGTGACATaGTCTGGATGGCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHPAGVT*SGWPTA
Trigger: TGCAGTGGGCCATCCAGAGCATGTCACGCCCGCTGG...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGALPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGCCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGGATCTCCTGCAGAGGTaGGGACAGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLDLLQR*GQASQV
Trigger: CACCTGGCTTGCCTGTCCCCACCTCTGCAGGAGATC...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGAAGTGGCAGCGCCAGTaGAAGGCAGCGGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLKWQRQ*KAAAQC
Trigger: ACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTT...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGTGCTCATCTCTACCCTaGGCTCCCTTGGCTCGGACC +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLCSSLP*APLART
Trigger: GGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCA...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
3UTR CAA 72 bp ACTGAGCCATCTCAAAGGCCCAGCTGGAGAGTTCCCTaGGTGCTCTCCCCTACAGTCCCTGTGTTACTATTA +
Preference number: 4 (lower is better)
Translates to: TEPSQRPSWRVP*VLSPTVPVLLL
Trigger: TAATAGTAACACAGGGACTGTAGGGGAGAGCACCAAGGGAACTCTCCAGCTGGGCCTTTGAGATGGCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR TCA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGAAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATAGCCGTCACAACAGATaGGCTCACCTCCGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHSRHNR*AHLRRG
Trigger: GCCACGACGGAGGTGAGCTCATCTGTTGTGACGGCT...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: QNLPALGPNQPRPLRTECPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: LVLISPGLSEQSASSDGAPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCGGAGGAACCCCACACTaGTGGCCCACTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGGGTPH*WPTFCS
Trigger: TGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCC...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAACTCCAGCAGAGGAGCTaGAGGGTGCGGGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKLQQRS*RVRGQQ
Trigger: CTGCTGGCCCCGCACCCTGCAGCTCCTCTGCTGGAG...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQRAWKA*GQPSFS
Trigger: GGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCT...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGCTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGAGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACCATCAGAGCTGGCTTTaGGCTCCCTGGATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYHQSWL*APWMGP
Trigger: GGGGCCCATCCAGGGAGCTCAAAGCCAGCTCTGATG...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR GCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: QLLVLISPGLSEQSASSDPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGACCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: PALGPNQPRPLRTECLIRPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: LLVLISPGLSEQSASSDGPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: LPALGPNQPRPLRTECLIPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGCCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATTGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAATCAGGAAGAGAAGGGTaGTGTCTCGGCCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQSGREG*CLGQRA
Trigger: CGCCCGCTGGCCGAGACACCACCCTTCTCTTCCTGA...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
3UTR CAA 72 bp ATTCCGTTTCCAAGAGGAAGGTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGGGGCTTAGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: IPFPRGRCCDSK*PSGFLGGLVFR
Trigger: CCTGAAGACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTTGGAAACGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR TCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAGCTGGAGACGCTCTTTaGGGCCAGAGTTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQAGDAL*GQSCWW
Trigger: CCACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGC...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGAAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCAGGATGCCGTCAAATaGGTGCTCATTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGQDAVK*VLIEEG
Trigger: TCCCTCCTCAATGAGCACTCATTTGACGGCATCCTG...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR GCA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGATCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAACCACTGGGGATCTCCTaGAGAGGTGGGGACAGGCAA +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQPLGIS*RGGDRQ
Trigger: TTGCCTGTCCCCACCTCTGCAGGAGATCCCCAGTGG...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACGGGCGTGACATGCTCTaGATGGCCCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYGRDML*MAHCRM
Trigger: CATCCTGCAGTGGGCCATCCAGAGCATGTCACGCCC...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR TCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATAAGAGGAAGGTGCTGTaGCTCCAAGTTGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHKRKVL*LQVAIW
Trigger: CCAGATGGCAACTTGGAGTCACAGCACCTTCCTCTT...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCCTGACTCAAACACCTaGTGGATAAGGATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGPDSNT*WIRIPS
Trigger: GGAAGGGATCCTTATCCAGCAGGTGTTTGAGTCAGG...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: FQDMGWPCISTKIRAICKPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAATCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKSGTTS*SARACS
Trigger: GCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGA...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAACTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGGACTCAAACACCTGCTaGATAAGGATCCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLDSNTC*IRIPST
Trigger: CGTGGAAGGGATCCTTATCCAGCAGGTGTTTGAGTC...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAATGTTGGACTCTGCCCTaGAGGCAGCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQCWTLP*RQQEHL
Trigger: GAGATGCTCCTGCTGCCTCCAGGGCAGAGTCCAACA...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAATGGGACAGGTTCTGTTaGACTCTGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQWDRFC*TLPWRQ
Trigger: CTGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCA...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAACCCTGGATGGGCCCCTaGTTTTCTCTGAAGCTGACC +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQPWMGP*FSLKLT
Trigger: GGTCAGCTTCAGAGAAAACCAGGGGCCCATCCAGGG...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACGTGACATGCTCTGGATaGCCCACTGCAGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYVTCSG*PTAGCR
Trigger: ACGGCATCCTGCAGTGGGCCATCCAGAGCATGTCAC...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR TCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAATGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKWSARA*SSGKAL
Trigger: CAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCA...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAATCTCCAGAGGCCACTaGGGATCTCCTGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKISRGH*GSPAEV
Trigger: CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGAT...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATTCTCTGGACAGAAGCTaGCATGGTCTGAATTCCGTT +
Preference number: 4 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHSLDRS*HGLNSV
Trigger: AACGGAATTCAGACCATGGCAGCTTCTGTCCAGAGA...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR GCA 90 bp GTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCCTTGTTCTTCAAATTaGCACTGGGGTCTTCGAACT +
Preference number: 4 (lower is better)
Translates to: VTLIPGYGVALHLYKDQGPCSSN*HWGLRT
Trigger: AGTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGG...GCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGTGCTTTTCTCTTGGTaGGGGGTCTGGGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKVLFSW*GVWVAV
Trigger: TACTGCCACCCAGACCCCCCACCAAGAGAAAAGCAC...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAACTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAACTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR TCA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACCTTCTTGGATCTTCCTaGCTCAAACACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYLLGSS*LKHLLD
Trigger: ATCCAGCAGGTGTTTGAGTCAGGAAGATCCAAGAAG...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR TCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAACTCTCCCCCAACCTaGATGCACTTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQNSPPT*MHFLDL
Trigger: AAGATCCAAGAAGTGCATTCAGGTTGGGGGAGAGTT...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAACTCCCTTTCCGGGACTaGTTTAGGTCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQLPFRD*FRSTSF
Trigger: AAAAGATGTGGACCTAAACCAGTCCCGGAAAGGGAG...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAACTCCAAGTTGCCATCTaGCTTCTTAGGGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKLQVAI*LLRGLS
Trigger: ACTAAGCCCCCTAAGAAGCCAGATGGCAACTTGGAG...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACGGTCTTCGAACTTGTTaGGTGTATAAAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYGLRTC*VYKTLP
Trigger: GGGGAGAGTTTTATACACCCAACAAGTTCGAAGACC...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CCA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAACCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CCA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACCCTGAATGCACTTCTTaGATCTTCCTGACTCAAACA +
Preference number: 4 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYPECTS*IFLTQT
Trigger: TGTTTGAGTCAGGAAGATCCAAGAAGTGCATTCAGG...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CAA 90 bp GGAGATTGGTCCCCGGCCGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGATCTCCTGAGGAGGGCTaGGGACCACTCCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GDWSPAGRRPSGSGSASGSPEEG*GPLLGW
Trigger: CCAGCCAAGGAGTGGTCCCAAGCCCTCCTCAGGAGA...TCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCGGCCGGGGACCAATCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS GCA 90 bp GCCAGTGGAAGGCAGCGGCACAGTGTGCACACCGCAACACCTCGGTaGCATCGCCACACACACTGCATCGCGCGCTTGGTGCTGGACCCG +
Preference number: 5 (lower is better)
Translates to: ASGRQRHSVHTATPR*HRHTHCIARLVLDP
Trigger: CGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGTGTGCACACTGTGCCGCTGCCTTCCACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105396.9
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS CCA 90 bp CCACTGTCCCGGGTCAGGAGCCAGGACAGCAGGGCGTGGAAGGCCTaGGGGCAGCCTTCCTTCTCCTTCAGACGGAGCGTCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PLSRVRSQDSRAWKA*GQPSFSFRRSVSWN
Trigger: GTTCCAGGAGACGCTCCGTCTGAAGGAGAAGGAAGGCTGCCCCCAGGCCTTCCACGCCCTGCTGTCCTGGCTCCTGACCCGGGACAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTAGCGTCTCCTGGAACTaGTCCTCAGGGACCACGTCG +
Preference number: 5 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPSVSWN*SSGTTS
Trigger: CGACGTGGTCCCTGAGGACAAGTTCCAGGAGACGCT...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GAAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: EEKGGVSASGRDMLWMAHGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...GTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAAGCCAGGTGGAAGGCCCGGGGACAGCCGTCACAACAGATGAGCTCACCTCCGGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: QARWKARGQPSQQMSSPPGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...CGGAGGTGAGCTCATCTGTTGTGACGGCTGTCCCCGGGCCTTCCACCTGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CAA 90 bp CGGGCGGCGGCCGTCGGGAAGTGGCAGCGCCAGTGGAAGGCAGCGGCACAGTGTTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: RAAAVGKWQRQWKAAAQCCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...ACACTGTGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCGACGGCCGCCGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CAA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000143735.8
ENSMUST00000154374.2
ENSMUST00000156417.8
CDS CCA 90 bp CGTCGTGGTCGGCTAGAGCATGCAGCAGCGGAAAGGCACTGTCTATaGCCACCGCGATCTCGGTGCGGTGCAGCCTCAGCAGACGGCGTA +
Preference number: 5 (lower is better)
Translates to: RRGRLEHAAAERHCL*PPRSRCGAASADGV
Trigger: TACGCCGTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCACGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCAGCGTCTCCTGGAACTaGTCCTCAGGGACCACGTCG +
Preference number: 5 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSSVSWN*SSGTTS
Trigger: CGACGTGGTCCCTGAGGACAAGTTCCAGGAGACGCT...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAACTACCCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQLPWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAG...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS GCA 90 bp CATGCAGCAGCGGAAAGGCACTGTCTATGGCCACCGCGATCTCGGTaGGGTGCAGCCTCAGCAGACGGCGTAGCATTCCATCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: HAAAERHCLWPPRSR*GAASADGVAFHPHL
Trigger: CAGGTGGGGATGGAATGCTACGCCGTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTCCGCTGCTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAAGCGTCTCCTGGAACTaGTCCTCAGGGACCACGTCG +
Preference number: 5 (lower is better)
Translates to: RPLRTECLIRWGWVGREPSVSWN*SSGTTS
Trigger: CGACGTGGTCCCTGAGGACAAGTTCCAGGAGACGCT...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GGCTGGGTGGGGAGGGAGCCAATGCTGTGCTGCCCACCCCTTCCTGGGCCACCTCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: GWVGREPMLCCPPLPGPPLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...AGGTGGCCCAGGAAGGGGTGGGCAGCACAGCATTGGCTCCCTCCCCACCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: PLRTECLIRWGWVGREPMVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000143735.8
ENSMUST00000154374.2
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000143735.8
ENSMUST00000154374.2
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCACTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: RPLRTECLIRWGWVGREPLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SAQASQNRVPHPMGLGGELGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGCATCAGAGCTGGCTTaGAGCTCCCTGGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGASELA*SSLDGP
Trigger: GGGCCCATCCAGGGAGCTCAAAGCCAGCTCTGATGC...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CAA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGTCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: PRPLRTECLIRWGWVGRESAEQD*QRRLVR
Trigger: CCGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCTGGAGGCAGCAGGAGCATCTCCAGAGGCCACTGGGGATCTCCTGCAGAGGTGCTCCTTGGCTGGAACTaGTCCTCAGGGACCACGTCG +
Preference number: 5 (lower is better)
Translates to: PGGSRSISRGHWGSPAEVLLGWN*SSGTTS
Trigger: CGACGTGGTCCCTGAGGACAAGTTCCAGCCAAGGAG...CACCTCTGCAGGAGATCCCCAGTGGCCTCTGGAGATGCTCCTGCTGCCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS GCA 90 bp GGCTGGAACTTGTCCTCAGGGACCACGTCGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTGTCTATGGCCACCGCGATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GWNLSSGTTSWSARA*SSGKALSMATAISV
Trigger: CACCGAGATCGCGGTGGCCATAGACAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGAGGACAAGTTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS GCA 90 bp GGGAGGGATGGAAGGGGAGGAACCCCACACTGCTGGCCCACTTTCTaGTCATCTCTACCCTGGGCTCCCTTGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GRDGRGGTPHCWPTF*SSLPWAPLARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCCCCTTCCATCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGATCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AGGCAAGCCAGGTGGAAGGCCCGGGGACAGCCGTCACAACAGATGAGCTCACCTTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: RQARWKARGQPSQQMSSPSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...AGGTGAGCTCATCTGTTGTGACGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CAA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: KRRVVSRPAGVTCSGWPTGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...AGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: KRRVVSRPAGVTCSGWPTLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...AGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGCTACCCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LISPGLSEQSASSDGAGWLPWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAG...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS GCA 90 bp TCCTGGAACTTGTCCTCAGGGACCACGTCGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTGTCTATGGCCACCGCGATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SWNLSSGTTSWSARA*SSGKALSMATAISV
Trigger: CACCGAGATCGCGGTGGCCATAGACAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGAGGACAAGTTCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS CCA 90 bp CACACTGCTGGCCCACTTTCTGCTCATCTCTACCCTGGGCTCCCTTaGCTCGGACCACTGGCTTTAGGCTGCTACCACTCCGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: HTAGPLSAHLYPGLP*LGPLALGCYHSGPC
Trigger: ACAAGGCCCGGAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp CCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGAGCGTCTCCTGGAACTaGTCCTCAGGGACCACGTCG +
Preference number: 5 (lower is better)
Translates to: PNQPRPLRTECLIRWGWVSVSWN*SSGTTS
Trigger: CGACGTGGTCCCTGAGGACAAGTTCCAGGAGACGCT...CACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LPALGPNQPRPLRTECLIGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LLVLISPGLSEQSASSDGGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: LISPGLSEQSASSDGAGWSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LISPGLSEQSASSDGAGWGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: QPRPLRTECLIRWGWVGRCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...CCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: PRPLRTECLIRWGWVGRELPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS CCA 90 bp TTCAGACGGAGCGTCTCCTGGAACTTGTCCTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGCAGCGGAAAGGCACTGTCTATGGCC +
Preference number: 5 (lower is better)
Translates to: FRRSVSWNLSSGTTS*SARACSSGKALSMA
Trigger: GGCCATAGACAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGAGGACAAGTTCCAGGAGACGCTCCGTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS CCA 90 bp TTGGGACCACTCCTTGGCTGGAACTTGTCCTCAGGGACCACGTCGTaGTCGGCTAGAGCATGCAGCAGCGGAAAGGCACTGTCTATGGCC +
Preference number: 5 (lower is better)
Translates to: LGPLLGWNLSSGTTS*SARACSSGKALSMA
Trigger: GGCCATAGACAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGAGGACAAGTTCCAGCCAAGGAGTGGTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR CAA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCATTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: RPLRTECLIRWGWVGREPLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: SAQASQNRVPHPMGLGGELGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ACACCGCAACACCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTTGGTGCTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: TPQHLGAIATHTASRAWCLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...GCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGGTGTTGCGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CAA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCATGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: RPLRTECLIRWGWVGREPCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: SAQASQNRVPHPMGLGGECCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: PGLSEQSASSDGAGWGGSALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...GCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: PRPLRTECLIRWGWVGREALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...CTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAACTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: MAHCRMPSNECSLRRDSRVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...CCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105395.9
ENSMUST00000143735.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LPALGPNQPRPLRTECLIVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...GATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000143735.8
ENSMUST00000154374.2
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGTCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: LISPGLSEQSASSDGAGWSAEQD*QRRLVP
Trigger: GGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp TCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGTCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: SAQASQNRVPHPMGLGGESNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...CTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp GGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GLSEQSASSDGAGWGGSQSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...TTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp AGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCATCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: RPLRTECLIRWGWVGREPSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...TGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp GGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGTCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: GPNQPRPLRTECLIRWGWSAEQD*QRRLVR
Trigger: CCGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...CCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCTACCCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LLVLISPGLSEQSASSDGLPWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAG...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp CTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: LWMAHCRMPSNECSLRRDSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...GTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: QNLPALGPNQPRPLRTECSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: MAHCRMPSNECSLRRDSRSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...CCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QNLPALGPNQPRPLRTECGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: CQLLVLISPGLSEQSASSGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: PLRTECLIRWGWVGREPMCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AGGCAAGCCAGGTGGAAGGCCCGGGGACAGCCGTCACAACAGATGAGCTCACCTCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: RQARWKARGQPSQQMSSPLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...AGGTGAGCTCATCTGTTGTGACGGCTGTCCCCGGGCCTTCCACCTGGCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CAA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGACTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: QNLPALGPNQPRPLRTECLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LLVLISPGLSEQSASSDGLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LVLISPGLSEQSASSDGALGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGATCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: ISPGLSEQSASSDGAGWGSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...TCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATCTACCCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: QLLVLISPGLSEQSASSDLPWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAG...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS GCA 90 bp CATCTCTACCCTGGGCTCCCTTGGCTCGGACCACTGGCTTTAGGCTaGTACCACTCCGGGCCTTGTTCTTCAAATTGCCACTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: HLYPGLPWLGPLALG*YHSGPCSSNCHWGL
Trigger: AAGACCCCAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: FQDMGWPCISTKIRAICKGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: LISPGLSEQSASSDGAGWCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGGAGGGAGCCAATGGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: PLRTECLIRWGWVGREPMALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...CATTGGCTCCCTCCCCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AAGAGAAGGGTGGTGTCTCGGCCAGCGGGCGTGACATGCTCTGGATGGCCCACTGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: KRRVVSRPAGVTCSGWPTALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...AGTGGGCCATCCAGAGCATGTCACGCCCGCTGGCCGAGACACCACCCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGTCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWSAEQD*QRRLVP
Trigger: GGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLVLISPGLSEQSASSDGSAEQD*QRRLVP
Trigger: GGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTGGGTGGGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: LISPGLSEQSASSDGAGWALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...CCACCCAGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: LGPNQPRPLRTECLIRWGLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...GCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATTCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: QLLVLISPGLSEQSASSDSAEQD*QRRLVP
Trigger: GGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGTCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRSAEQD*QRRLVR
Trigger: CCGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGGCTTGGGACCACTCCTaGGCTGGAACTTGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRAWDHS*AGTCPQ
Trigger: CTGAGGACAAGTTCCAGCCAAGGAGTGGTCCCAAGC...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS-3UTR CAA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: LLVLISPGLSEQSASSDGLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: QNLPALGPNQPRPLRTECLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: MAHCRMPSNECSLRRDSRLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...CCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCTGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: QNLPALGPNQPRPLRTECCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCTCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: LVLISPGLSEQSASSDGALPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...AGCCCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGAACCTGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: QNLPALGPNQPRPLRTECLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...GCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGCATCAGAGCTGGCTTaGAGCTCCCTGGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQASELA*SSLDGP
Trigger: GGGCCCATCCAGGGAGCTCAAAGCCAGCTCTGATGC...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CAA 90 bp CCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PALGPNQPRPLRTECLIRSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...TCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp GACATGCTCTGGATGGCCCACTGCAGGATGCCGTCAAATGAGTGCTCATTGAGGTTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: DMLWMAHCRMPSNECSLRLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...CCTCAATGAGCACTCATTTGACGGCATCCTGCAGTGGGCCATCCAGAGCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAATCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TGCCAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: CQLLVLISPGLSEQSASSALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...GGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: LLVLISPGLSEQSASSDGALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...CCCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGGGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: ALGPNQPRPLRTECLIRWALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...CCATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGGCATCAGAGCTGGCTTaGAGCTCCCTGGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLASELA*SSLDGP
Trigger: GGGCCCATCCAGGGAGCTCAAAGCCAGCTCTGATGC...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CAA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGAGCGTCTCCTGGAACTaGTCCTCAGGGACCACGTCG +
Preference number: 5 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLSVSWN*SSGTTS
Trigger: CGACGTGGTCCCTGAGGACAAGTTCCAGGAGACGCT...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: LIPGYGVALHLYKDQGHLSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...CAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp CAGCTCTTGGTCCTAATCAGCCCAGGCCTCTCAGAACAGAGTGCCTCATCCGATGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: QLLVLISPGLSEQSASSDALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...ATCGGATGAGGCACTCTGTTCTGAGAGGCCTGGGCTGATTAGGACCAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTACCCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHLPWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAG...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGATTAGGTCCACATCTTTaGGGAAGCCGTCCAGGATGC +
Preference number: 5 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRLGPHL*GSRPGC
Trigger: GCATCCTGGACGGCTTCCCAAAAGATGTGGACCTAA...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATTCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATGGCTGGAGACGCTCTTaGAGGCCAGAGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHGWRRS*RPELLV
Trigger: CACCAGCAACTCTGGCCTCAAAGAGCGTCTCCAGCC...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATGCCGTCAAATGAGTGCTCATTGAGGAGGGACTCCAGGTCGTCCCTATGTAGACTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: MPSNECSLRRDSRSSLCRLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...TCTACATAGGGACGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGACGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: TLIPGYGVALHLYKDQGHLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...ATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGGCAGTACCGCGGCCTaGGGACCAGCAAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKGSTAA*GPARGF
Trigger: AAAGCCCCTTGCTGGTCCCAAGGCCGCGGTACTGCC...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAAGGCCTTGTTCTTCAAATaGCCACTGGGGTCTTCGAAC +
Preference number: 5 (lower is better)
Translates to: FQDMGWPCISTKIRAICKALFFK*PLGSSN
Trigger: GTTCGAAGACCCCAGTGGCAATTTGAAGAACAAGGC...CTTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp ATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGATCAGGGCCATCTGCAACTACCACTCCGGGCCTaGTTCTTCAAATTGCCACTG +
Preference number: 5 (lower is better)
Translates to: IPGYGVALHLYKDQGHLQLPLRA*FFKLPL
Trigger: CAGTGGCAATTTGAAGAACAAGGCCCGGAGTGGTAG...TTGCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGTGACCTGGGCTCCCTaGGCTCGGACCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKVTWAP*ARTTGF
Trigger: AAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGTCAC...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAAGCATCAGAGCTGGCTTaGAGCTCCCTGGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKASELA*SSLDGP
Trigger: GGGCCCATCCAGGGAGCTCAAAGCCAGCTCTGATGC...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000019257.15
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS-3UTR CAA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAATCTTTGAGGCCAGAGTaGCTGGTGGGGTGGCTCGAG +
Preference number: 5 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKSLRPE*LVGWLE
Trigger: CTCGAGCCACCCCACCAGCAACTCTGGCCTCAAAGA...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAACTGGGACAGGTTCTGTaGGACTCTGCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKLGQVL*DSALEA
Trigger: TGCCTCCAGGGCAGAGTCCAACAGAACCTGTCCCAG...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAATCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQSAEQD*QRRLVP
Trigger: GGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS-3UTR CAA 90 bp TACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAAATCTGCAGAGCAGGATTaGCAGCGGAGATTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: YIEVTLIPGYGVALHLYKSAEQD*QRRLVP
Trigger: GGGGACCAATCTCCGCTGCAAATCCTGCTCTGCAGA...TTTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000019257.15
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
ENSMUST00000155021.8
CDS TCA 90 bp CCTCGTTCTGCTGTGACTAATTGGAAATCTCCTAATATGCATCCTTaGAAACTTCCAAGAAAGAGCTGGTTAACCTGGGGCTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: PRSAVTNWKSPNMHP*KLPRKSWLTWGSLG
Trigger: CCCCAGTGAGCCCCAGGTTAACCAGCTCTTTCTTGGAAGTTTTCAAGGATGCATATTAGGAGATTTCCAATTAGTCACAGCAGAACGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143735.8
CDS-3UTR CAA 90 bp GTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACAATGCTGTGACTCCAAGTaGCCATCTGGCTTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: VHRSDFNSRIWGGLASLQCCDSK*PSGFLG
Trigger: CCCTAAGAAGCCAGATGGCAACTTGGAGTCACAGCA...TTGTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS-3UTR CAA 90 bp AAGTACATAGAAGTGACTTTAATTCCAGGATATGGGGTGGCCTTGCATCTCTACTCAAATGAGTGCTCATaGAGGAGGGACTCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: KYIEVTLIPGYGVALHLYSNECS*RRDSRS
Trigger: CGACCTGGAGTCCCTCCTCAATGAGCACTCATTTGA...GTAGAGATGCAAGGCCACCCCATATCCTGGAATTAAAGTCACTTCTATGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000145975.8
CDS CAA 72 bp CCTCGGTGCCATCGCCACACACACTGCATCGCGCGCTaGGTGCTGGACCCGGGGTCTCTGCAGGTAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PRCHRHTHCIAR*VLDPGSLQVAP
Trigger: CGGAGCTACCTGCAGAGACCCCGGGTCCAGCACCAAGCGCGCGATGCAGTGTGTGTGGCGATGGCACCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105396.9
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS CCA 72 bp CTGGACCCGGGGTCTCTGCAGGTAGCTCCGGGGGCCTaGACACCTCAGGCTGGGACAGGTTCTGTTGGACTC +
Preference number: 6 (lower is better)
Translates to: LDPGSLQVAPGA*TPQAGTGSVGL
Trigger: GAGTCCAACAGAACCTGTCCCAGCCTGAGGTGTCCAGGCCCCCGGAGCTACCTGCAGAGACCCCGGGTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000105396.9
ENSMUST00000154374.2
ENSMUST00000155021.8
CDS GCA 72 bp GGAAGGGGAGGAACCCCACACTGCTGGCCCACTTTCTaGTCATCTCTACCCTGGGCTCCCTTGGCTCGGACC +
Preference number: 6 (lower is better)
Translates to: GRGGTPHCWPTF*SSLPWAPLART
Trigger: GGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS CCA 72 bp ATTGGTCCGGGGTCTCTGCAGGTAGCTCCGGGGGCCTaGACACCTCAGGCTGGGACAGGTTCTGTTGGACTC +
Preference number: 6 (lower is better)
Translates to: IGPGSLQVAPGA*TPQAGTGSVGL
Trigger: GAGTCCAACAGAACCTGTCCCAGCCTGAGGTGTCCAGGCCCCCGGAGCTACCTGCAGAGACCCCGGACCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000105395.9
ENSMUST00000140636.8
ENSMUST00000148469.8
ENSMUST00000156417.8
CDS CAA 90 bp CCACACTGCTGGCCCACTTTCTGCTCATCTCTACCCTGGGCTCCCTaGGCTCGGACCACTGGCTTTAGGCTGCTACCACTCCGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: PHCWPTFCSSLPWAP*ARTTGFRLLPLRAL
Trigger: CAAGGCCCGGAGTGGTAGCAGCCTAAAGCCAGTGGTCCGAGCCAAGGGAGCCCAGGGTAGAGATGAGCAGAAAGTGGGCCAGCAGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130972.8
ENSMUST00000140636.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000155021.8
CDS GCA 72 bp AAGGCACTGTCTATGGCCACCGCGATCTCGGTGCGGTaGAGCCTCAGCAGACGGCGTAGCATTCCATCCCCA +
Preference number: 6 (lower is better)
Translates to: KALSMATAISVR*SLSRRRSIPSP
Trigger: TGGGGATGGAATGCTACGCCGTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGGCCATAGACAGTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS GCA 72 bp GCGGAAAGGCACTGTCTATGGCCACCGCGATCTCGGTaGGGTGCAGCCTCAGCAGACGGCGTAGCATTCCAT +
Preference number: 6 (lower is better)
Translates to: AERHCLWPPRSR*GAASADGVAFH
Trigger: ATGGAATGCTACGCCGTCTGCTGAGGCTGCACCGCACCGAGATCGCGGTGGCCATAGACAGTGCCTTTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS GCA 72 bp TTGTCCTCAGGGACCACGTCGTGGTCGGCTAGAGCATaGAGCAGCGGAAAGGCACTGTCTATGGCCACCGCG +
Preference number: 6 (lower is better)
Translates to: LSSGTTSWSARA*SSGKALSMATA
Trigger: CGCGGTGGCCATAGACAGTGCCTTTCCGCTGCTGCATGCTCTAGCCGACCACGACGTGGTCCCTGAGGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000019257.15
ENSMUST00000105395.9
ENSMUST00000105396.9
ENSMUST00000128241.8
ENSMUST00000130972.8
ENSMUST00000131028.8
ENSMUST00000140636.8
ENSMUST00000143735.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
ENSMUST00000155021.8
ENSMUST00000156417.8
CDS CAA 90 bp GAGCGTCTCCTGGGACTTGATCTGGAGAGGTCTCCTGAGGAGGGCTaGGGACCACTCCTTGGCTGGAACTTGTCCTCAGGGACCACGTCG +
Preference number: 6 (lower is better)
Translates to: ERLLGLDLERSPEEG*GPLLGWNLSSGTTS
Trigger: CGACGTGGTCCCTGAGGACAAGTTCCAGCCAAGGAGTGGTCCCAAGCCCTCCTCAGGAGACCTCTCCAGATCAAGTCCCAGGAGACGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8
CDS CCA 72 bp CCGTCGTGGCACACGGCACACTCATCCTCGTTCTTCTaGTTAACCTGGGGCTCACTGGGGAGGGATGGAAGG +
Preference number: 6 (lower is better)
Translates to: PSWHTAHSSSFF*LTWGSLGRDGR
Trigger: CCTTCCATCCCTCCCCAGTGAGCCCCAGGTTAACCAGAAGAACGAGGATGAGTGTGCCGTGTGCCACGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000105395.9
ENSMUST00000128241.8
ENSMUST00000145975.8
ENSMUST00000148469.8
ENSMUST00000154374.2
CDS CAA 72 bp CTGGGACTTGATCTGGAGAGGTCTCCTGAGGAGGGCTaGGGACCACTCCTTGGCTGGAACTTGTCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LGLDLERSPEEG*GPLLGWNLSSG
Trigger: CCCTGAGGACAAGTTCCAGCCAAGGAGTGGTCCCAAGCCCTCCTCAGGAGACCTCTCCAGATCAAGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131028.8