Pregenerated sensors for AIPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040554Ensembl transcript IDs: ENSMUST00000048207.10, ENSMUST00000059082.4
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCTGTTTGTCCGCCAGGCGGCTCTCCAGCAGCCGCAGTTCCCTaGGCACCGCCTTGCGCATGGATGGCTCCAACTCCAGCACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: PPVCPPGGSPAAAVP*APPCAWMAPTPALS Trigger: AGAAAGTGCTGGAGTTGGAGCCATCCATGCGCAAGGCGGTGCTCAGGGAACTGCGGCTGCTGGAGAGCCGCCTGGCGGACAAACAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR GCA 90 bp | ACTGGTAGCCTCCTGGTAGCCAAGAACACCTCCCCTGGGGTACCCTaGAGCAAGAGGAGCAGCGTGCCTACCGATACCCAGTCCATAGCC | + |
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Preference number: 1 (lower is better) Translates to: TGSLLVAKNTSPGVP*SKRSSVPTDTQSIA Trigger: GGCTATGGACTGGGTATCGGTAGGCACGCTGCTCCTCTTGCTGCAGGGTACCCCAGGGGAGGTGTTCTTGGCTACCAGGAGGCTACCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR GCA 90 bp | GTCCGCCTTGGCCTCCTCAGCGTTCCACACCTCTGCGTGAGCACGTaGGCGCATATAGTAGGCCTTCACGATCCCTGCGTGGAGAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: VRLGLLSVPHLCVST*AHIVGLHDPCVEKC Trigger: ACACTTCTCCACGCAGGGATCGTGAAGGCCTACTATATGCGCGCACGTGCTCACGCAGAGGTGTGGAACGCTGAGGAGGCCAAGGCGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR GCA 90 bp | CACTTTCTCCAGGTCCGCCTTGGCCTCCTCAGCGTTCCACACCTCTaGGTGAGCACGTGCGCGCATATAGTAGGCCTTCACGATCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: HFLQVRLGLLSVPHL*VSTCAHIVGLHDPC Trigger: GCAGGGATCGTGAAGGCCTACTATATGCGCGCACGTGCTCACGCAGAGGTGTGGAACGCTGAGGAGGCCAAGGCGGACCTGGAGAAAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 90 bp | CCTCCCAGGGCTTCTCCTTGGTCTGAAGGTTCCTCAGGCACACAATaGCCTCCTGGTACTTGGTGGCGGCCTGATCATAGCGTCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PPRASPWSEGSSGTQ*PPGTWWRPDHSVPA Trigger: AGCTGGGACGCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGAACCTTCAGACCAAGGAGAAGCCCTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR GCA 90 bp | CTCTGCGTGAGCACGTGCGCGCATATAGTAGGCCTTCACGATCCCTaGGTGGAGAAGTGTACAGCACCCACCCAGCAAGTCCCAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: LCVSTCAHIVGLHDP*VEKCTAPTQQVPES Trigger: GCTTTCTGGGACTTGCTGGGTGGGTGCTGTACACTTCTCCACGCAGGGATCGTGAAGGCCTACTATATGCGCGCACGTGCTCACGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 90 bp | CCTTGGTCTGAAGGTTCCTCAGGCACACAATGGCCTCCTGGTACTTaGTGGCGGCCTGATCATAGCGTCCCAGCTTGTAGAGCCTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: PWSEGSSGTQWPPGT*WRPDHSVPACRACC Trigger: GCAACAGGCTCTACAAGCTGGGACGCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGAACCTTCAGACCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR TCA 90 bp | AGGGATGCCCAATCTATGCTTGCTGCACGGGTAGCCCACGGGCTGTaGGAATGCAGAGAAGTCACTGGTAGCCTCCTGGTAGCCAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: RDAQSMLAARVAHGL*ECREVTGSLLVAKN Trigger: GTTCTTGGCTACCAGGAGGCTACCAGTGACTTCTCTGCATTCTCACAGCCCGTGGGCTACCCGTGCAGCAAGCATAGATTGGGCATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR TCA 90 bp | ACCGAGGACGCAAGCTTTGTCACCATCAGACCCTGTCCTCACACCTaGCCAGTCTGGGTGACTGAGGCTCAGTGCTTTAAGGGTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: TEDASFVTIRPCPHT*PVWVTEAQCFKGGG Trigger: ACCTCCACCCTTAAAGCACTGAGCCTCAGTCACCCAGACTGGTCAGGTGTGAGGACAGGGTCTGATGGTGACAAAGCTTGCGTCCTCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 90 bp | TGGTCTGAAGGTTCCTCAGGCACACAATGGCCTCCTGGTACTTGGTaGCGGCCTGATCATAGCGTCCCAGCTTGTAGAGCCTGTTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: WSEGSSGTQWPPGTW*RPDHSVPACRACCL Trigger: AAGGCAACAGGCTCTACAAGCTGGGACGCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGAACCTTCAGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR GCA 90 bp | CTTTTAAGTTGGCACTGGAGAGAAGGTTCTGCCGCTGTGAGCACTTaGTGCTCTTCCAGAGGACCTGAGTTTGGTTCCCAACGCTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: LLSWHWREGSAAVST*CSSRGPEFGSQRSG Trigger: ACCTGAGCGTTGGGAACCAAACTCAGGTCCTCTGGAAGAGCAGCAAGTGCTCACAGCGGCAGAACCTTCTCTCCAGTGCCAACTTAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR GCA 90 bp | CTTCATATTTTTCCCTGGATTGCTGGCCTCCTTTCAAAGCCTGGCTaGTCCTCCCAAATGGCTCATGGAACTACACAGCCATATGCACAC | + |
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Preference number: 1 (lower is better) Translates to: LHIFPWIAGLLSKPG*SSQMAHGTTQPYAH Trigger: GTGTGCATATGGCTGTGTAGTTCCATGAGCCATTTGGGAGGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGGAAAAATATGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 90 bp | TCGACTTCATATTTTTCCCTGGATTGCTGGCCTCCTTTCAAAGCCTaGCTGCTCCTCCCAAATGGCTCATGGAACTACACAGCCATATGC | + |
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Preference number: 1 (lower is better) Translates to: STSYFSLDCWPPFKA*LLLPNGSWNYTAIC Trigger: GCATATGGCTGTGTAGTTCCATGAGCCATTTGGGAGGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGGAAAAATATGAAGTCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 90 bp | TACTGCCAGAGACCTGCTGAAAAGTGTCGACTTCATATTTTTCCCTaGATTGCTGGCCTCCTTTCAAAGCCTGGCTGCTCCTCCCAAATG | + |
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Preference number: 1 (lower is better) Translates to: YCQRPAEKCRLHIFP*IAGLLSKPGCSSQM Trigger: CATTTGGGAGGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGGAAAAATATGAAGTCGACACTTTTCAGCAGGTCTCTGGCAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 90 bp | ATACCCAAGCCCAGGAAAGAGTGGAACCCCATTTGTAAGCAACACTaGTACATGATACAAGTGGCTGTGATAGAGACTTGTGTGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: IPKPRKEWNPICKQH*YMIQVAVIETCVET Trigger: TGTCTCCACACAAGTCTCTATCACAGCCACTTGTATCATGTACCAGTGTTGCTTACAAATGGGGTTCCACTCTTTCCTGGGCTTGGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR TCA 90 bp | TCATGTAAATGTTGTTTATTGATTTTTCAGAGGTTCCAGTCATCCTaGGCACAGAGCACAGACCTCATTTGTTTGCAGAGCTCAGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SCKCCLLIFQRFQSS*AQSTDLICLQSSEW Trigger: CCACTCTGAGCTCTGCAAACAAATGAGGTCTGTGCTCTGTGCTCAGGATGACTGGAACCTCTGAAAAATCAATAAACAACATTTACATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTTTGTCCGCCAGGCGGCTCTCCAGCAGCCGCAGTTCCCTGAGCACCGCCCCCAGGGCTTCTCCTTaGTCTGAAGGTTCCTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SCLSARRLSSSRSSLSTAPRASP*SEGSSG Trigger: GCCTGAGGAACCTTCAGACCAAGGAGAAGCCCTGGG...GGCGGTGCTCAGGGAACTGCGGCTGCTGGAGAGCCGCCTGGCGGACAAACAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTTTGTCCGCCAGGCGGCTCTCCAGCAGCCGCAGTTCCCTGAGCACCGCCGTAGCCCACGGGCTGTaGGAATGCAGAGAAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: SCLSARRLSSSRSSLSTAVAHGL*ECREVT Trigger: AGTGACTTCTCTGCATTCTCACAGCCCGTGGGCTAC...GGCGGTGCTCAGGGAACTGCGGCTGCTGGAGAGCCGCCTGGCGGACAAACAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAGGCTGTGAGGCAGGAGGATCACCAGTTCCGAGTGAGCCTGGACTAGATCTACCCCCTCACCCCTaGCAGGGCTGCACCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TGGCEAGGSPVPSEPGLDLPPHP*QGCTWV Trigger: CACCCAGGTGCAGCCCTGGCAGGGGTGAGGGGGTAG...ATCTAGTCCAGGCTCACTCGGAACTGGTGATCCTCCTGCCTCACAGCCTCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | CCACCCAGCAAGTCCCAGAAAGCCCCGGCATTCGGCCACCCAGCCTCCGTTTCTTGGCCTCCTGGTACTTaGTGGCGGCCTGATCATAGC | + |
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Preference number: 2 (lower is better) Translates to: PPSKSQKAPAFGHPASVSWPPGT*WRPDHS Trigger: GCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCA...AGAAACGGAGGCTGGGTGGCCGAATGCCGGGGCTTTCTGGGACTTGCTGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCAGGGCTTCCTCCTTTCAAAGCCTaGCTGCTCCTCCCAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: SSVPTDTQSIAPALAPGLPPFKA*LLLPNG Trigger: GCCATTTGGGAGGAGCAGCCAGGCTTTGAAAGGAGG...AAGCCCTGGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCGCAGTTCCCTGAGCACCGCCTTGCGCATGGATGGCTCCAACTCCAGCACTTGCCCTTTGTTAATTTaGGGTTTGGGGGAGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SRSSLSTALRMDGSNSSTCPLLI*GLGEGL Trigger: AAGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCA...AGTGCTGGAGTTGGAGCCATCCATGCGCAAGGCGGTGCTCAGGGAACTGCGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCAGGGCTTCAGACCTCATTTGTTTaGAGAGCTCAGAGTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: SSVPTDTQSIAPALAPGLQTSFV*RAQSGC Trigger: ACATCCACTCTGAGCTCTGCAAACAAATGAGGTCTG...AAGCCCTGGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR CCA 90 bp | CGCCGGCCTCAGTCAGAAGCAGACACCTCCCTCCATAAAATATCACCCACCCAGCCATGCCTCATGGGGTaGGGAAGGTCTACTAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RRPQSEADTSLHKISPTQPCLMG*GRSTKG Trigger: GCCCTTAGTAGACCTTCCCCACCCCATGAGGCATGG...CTGGGTGGGTGATATTTTATGGAGGGAGGTGTCTGCTTCTGACTGAGGCCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAGGCTGTGAGGCAGGAGGATCACCAGTTCCGAGTGAGCCTGGACTAGATCTGTTGCCTTCTCCATaGAGAAGAGGTACCGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TGGCEAGGSPVPSEPGLDLLPSP*RRGTAC Trigger: GCAGGCGGTACCTCTTCTTCATGGAGAAGGCAACAG...ATCTAGTCCAGGCTCACTCGGAACTGGTGATCCTCCTGCCTCACAGCCTCCAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCGCAGTTCCCTGAGCACCGCCTTGCGCATGGATGGCTCCAACTCCAGCACTGCTTGTAGAGCCTGTTaGCTTCTCCATGAAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SRSSLSTALRMDGSNSSTACRAC*LLHEEE Trigger: CTCTTCTTCATGGAGAAGGCAACAGGCTCTACAAGC...AGTGCTGGAGTTGGAGCCATCCATGCGCAAGGCGGTGCTCAGGGAACTGCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTTGCCTGGGGCCTGGCTaGCCTGTCTCTCTAACCCCC | + |
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Preference number: 2 (lower is better) Translates to: RNGSCPVPFVNLRFGGGACLGPG*PVSLTP Trigger: GGGGGTTAGAGAGACAGGGCAGCCAGGCCCCAGGCA...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | CGCCGGCCTCAGTCAGAAGCAGACACCTCCCTCCATAAAATATCACCCACCCAGTCCTCAGGCACACAATaGCCTCCTGGTACTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RRPQSEADTSLHKISPTQSSGTQ*PPGTWW Trigger: CCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGA...CTGGGTGGGTGATATTTTATGGAGGGAGGTGTCTGCTTCTGACTGAGGCCGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTTCCCCTGGGGTACCCTaGAGCAAGAGGAGCAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: RNGSCPVPFVNLRFGGGASPGVP*SKRSSV Trigger: CACGCTGCTCCTCTTGCTGCAGGGTACCCCAGGGGA...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | CCACCCAGCAAGTCCCAGAAAGCCCCGGCATTCGGCCACCCAGCCTCCGTTTCTTATCACCCACCCAGATaGACATACAATGCAGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: PPSKSQKAPAFGHPASVSYHPPR*TYNAVV Trigger: TACAACTGCATTGTATGTGCATCTGGGTGGGTGATA...AGAAACGGAGGCTGGGTGGCCGAATGCCGGGGCTTTCTGGGACTTGCTGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGATTGCTGGCCTCCTTTCAAAGCCTGGCTGCTCCTCCCAAATGGCTCATAGCTTCCATGCCTCATaGGGTGGGGAAGGTCTACTA | + |
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Preference number: 2 (lower is better) Translates to: PWIAGLLSKPGCSSQMAHSFHAS*GGEGLL Trigger: TAGTAGACCTTCCCCACCCCATGAGGCATGGAAGCT...ATGAGCCATTTGGGAGGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTCCGTTTCTTCCCAAATCCTGTGACCAATTTCACTTTCAGAACTCCACTTCCCCTGGGGTACCCTaGAGCAAGAGGAGCAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: QPPFLPKSCDQFHFQNSTSPGVP*SKRSSV Trigger: CACGCTGCTCCTCTTGCTGCAGGGTACCCCAGGGGA...AGTGGAGTTCTGAAAGTGAAATTGGTCACAGGATTTGGGAAGAAACGGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCAGGGCTTAAAATACTTTTAAGTTaGCACTGGAGAGAAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SSVPTDTQSIAPALAPGLKILLS*HWREGS Trigger: AGAACCTTCTCTCCAGTGCCAACTTAAAAGTATTTT...AAGCCCTGGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR GCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTGTGACTGAGGCTCAGTaGTTTAAGGGTGGAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RNGSCPVPFVNLRFGGGAVTEAQ*FKGGGA Trigger: AGCACCTCCACCCTTAAAGCACTGAGCCTCAGTCAC...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTCCGTTTCTTCCCAAATCCTGTGACCAATTTCACTTTCAGAACTCCACTCCTCCTGGTACTTGGTaGCGGCCTGATCATAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: QPPFLPKSCDQFHFQNSTPPGTW*RPDHSV Trigger: GACGCTATGATCAGGCCGCCACCAAGTACCAGGAGG...AGTGGAGTTCTGAAAGTGAAATTGGTCACAGGATTTGGGAAGAAACGGAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTTGCCCTTTGTTAATTTaGGGTTTGGGGGAGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: RNGSCPVPFVNLRFGGGACPLLI*GLGEGL Trigger: AAGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCA...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAGGCTGTGAGGCAGGAGGATCACCAGTTCCGAGTGAGCCTGGACTAGATGGCTTTGATTTTCCATaGGCATCTATGACTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: TGGCEAGGSPVPSEPGLDGFDFP*ASMTLI Trigger: GATCAAAGTCATAGATGCCCATGGAAAATCAAAGCC...ATCTAGTCCAGGCTCACTCGGAACTGGTGATCCTCCTGCCTCACAGCCTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTTTGCAGAGCTCAGAGTaGATGTTAACCACCAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: RNGSCPVPFVNLRFGGGALQSSE*MLTTSV Trigger: CACGCTGGTGGTTAACATCCACTCTGAGCTCTGCAA...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR TCA 90 bp | TGGAACCCCATTTGTAAGCAACACTGGTACATGATACAAGTGGCTGTGATAGAGGTAGCCCACGGGCTGTaGGAATGCAGAGAAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: WNPICKQHWYMIQVAVIEVAHGL*ECREVT Trigger: AGTGACTTCTCTGCATTCTCACAGCCCGTGGGCTAC...CTCTATCACAGCCACTTGTATCATGTACCAGTGTTGCTTACAAATGGGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTCTCCCAAATGGCTCATaGAACTACACAGCCATATGC | + |
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Preference number: 2 (lower is better) Translates to: RNGSCPVPFVNLRFGGGALPNGS*NYTAIC Trigger: GCATATGGCTGTGTAGTTCCATGAGCCATTTGGGAG...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATGAAGTGACAAAAGCCGCTGTGAGCACTTaGTGCTCTTCCAGAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: RVTKVNDIQRGSIDEVTKAAVST*CSSRGP Trigger: AGGTCCTCTGGAAGAGCAGCAAGTGCTCACAGCGGC...TTTTGTCACTTCATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTGGCTTTGATTTTCCATaGGCATCTATGACTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: WLAGVPRVTKVNDIQRGSGFDFP*ASMTLI Trigger: GATCAAAGTCATAGATGCCCATGGAAAATCAAAGCC...AGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGCCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTGTGACATCAAAGACCTaGTTAATTGAACCAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: RNGSCPVPFVNLRFGGGAVTSKT*LIEPGM Trigger: CATCCCTGGTTCAATTAACCAGGTCTTTGATGTCAC...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCTCCGTTTCTTCCCAAATCCTGTGACCAATTTCACTTTCAGAACTCCACTTCATATTTTTCCCTaGATTGCTGGCCTCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PSLRFFPNPVTNFTFRTPLHIFP*IAGLLS Trigger: TGAAAGGAGGCCAGCAATCCAGGGAAAAATATGAAG...TGGAGTTCTGAAAGTGAAATTGGTCACAGGATTTGGGAAGAAACGGAGGCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATATTTGTAAGCAACACTaGTACATGATACAAGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AGVPRVTKVNDIQRGSIDICKQH*YMIQVA Trigger: AGCCACTTGTATCATGTACCAGTGTTGCTTACAAAT...ATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATGAAGTGACAAAACTTTTAAGTTGGCACTaGAGAGAAGGTTCTGCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: RVTKVNDIQRGSIDEVTKLLSWH*REGSAA Trigger: AGCGGCAGAACCTTCTCTCCAGTGCCAACTTAAAAG...TTTTGTCACTTCATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATGAAGTGACAAAAGTACCTGTACACATATaGCAGACACACAGACACGAA | + |
|
Preference number: 2 (lower is better) Translates to: RVTKVNDIQRGSIDEVTKVPVHI*QTHRHE Trigger: TTCGTGTCTGTGTGTCTGCCATATGTGTACAGGTAC...TTTTGTCACTTCATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| 3UTR TCA 72 bp | TGTCCGCCAGGCGGCTCTCCAGCAGCCGCAGTTCCCTaGGCACCGCCTTGCGCATGGATGGCTCCAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CPPGGSPAAAVP*APPCAWMAPTP Trigger: TGGAGTTGGAGCCATCCATGCGCAAGGCGGTGCTCAGGGAACTGCGGCTGCTGGAGAGCCGCCTGGCGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR GCA 72 bp | CTCCTGGTAGCCAAGAACACCTCCCCTGGGGTACCCTaGAGCAAGAGGAGCAGCGTGCCTACCGATACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLVAKNTSPGVP*SKRSSVPTDTQ Trigger: CTGGGTATCGGTAGGCACGCTGCTCCTCTTGCTGCAGGGTACCCCAGGGGAGGTGTTCTTGGCTACCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR GCA 72 bp | GGCCTCCTCAGCGTTCCACACCTCTGCGTGAGCACGTaGGCGCATATAGTAGGCCTTCACGATCCCTGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: GLLSVPHLCVST*AHIVGLHDPCV Trigger: CACGCAGGGATCGTGAAGGCCTACTATATGCGCGCACGTGCTCACGCAGAGGTGTGGAACGCTGAGGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 72 bp | GGTTCCTCAGGCACACAATGGCCTCCTGGTACTTGGTaGCGGCCTGATCATAGCGTCCCAGCTTGTAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GSSGTQWPPGTW*RPDHSVPACRA Trigger: GGCTCTACAAGCTGGGACGCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR CCA 72 bp | CCCCTGGATGAAGACAAGCTTCCATGCCTCATGGGGTaGGGAAGGTCTACTAAGGGCTCCCAAGGTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PLDEDKLPCLMG*GRSTKGSQGAW Trigger: CCAGGCACCTTGGGAGCCCTTAGTAGACCTTCCCCACCCCATGAGGCATGGAAGCTTGTCTTCATCCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 72 bp | GAAGGTTCCTCAGGCACACAATGGCCTCCTGGTACTTaGTGGCGGCCTGATCATAGCGTCCCAGCTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: EGSSGTQWPPGT*WRPDHSVPACR Trigger: TCTACAAGCTGGGACGCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGAACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR CCA 72 bp | GCTTCTCCTTGGTCTGAAGGTTCCTCAGGCACACAATaGCCTCCTGGTACTTGGTGGCGGCCTGATCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASPWSEGSSGTQ*PPGTWWRPDHS Trigger: GCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGAACCTTCAGACCAAGGAGAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAGGCTGTGAGGCAGGAGGATCACCAGTTCCGAGTGAGCCTGGACTAGATGTGCCCTTTGTTAATTaGAGGTTTGGGGGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGGCEAGGSPVPSEPGLDVPFVN*RFGGGA Trigger: AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCAC...ATCTAGTCCAGGCTCACTCGGAACTGGTGATCCTCCTGCCTCACAGCCTCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR GCA 72 bp | TTTCCCTGGATTGCTGGCCTCCTTTCAAAGCCTGGCTaGTCCTCCCAAATGGCTCATGGAACTACACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FPWIAGLLSKPG*SSQMAHGTTQP Trigger: TGGCTGTGTAGTTCCATGAGCCATTTGGGAGGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR CCA 72 bp | CACATACAATGCAGTTGTAGGCTTGTGGGAACCCCCTaGATGAAGACAAGCTTCCATGCCTCATGGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HIQCSCRLVGTP*MKTSFHASWGG Trigger: CCCACCCCATGAGGCATGGAAGCTTGTCTTCATCCAGGGGGTTCCCACAAGCCTACAACTGCATTGTATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATCCTCCCCTGGCCTCCTaGGGTACCTGTACACATATG | + |
|
Preference number: 3 (lower is better) Translates to: AGVPRVTKVNDIQRGSIDPPLAS*GTCTHM Trigger: CATATGTGTACAGGTACCCAAGGAGGCCAGGGGAGG...ATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| 3UTR-3UTR CAA 90 bp | CGCCGGCCTCAGTCAGAAGCAGACACCTCCCTCCATAAAATATCACCCACCCAGTTGAGGATCAGGGTGTaGATCATCTTCTCCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRPQSEADTSLHKISPTQLRIRV*IIFSSF Trigger: GAAGCTGGAGAAGATGATCAACACCCTGATCCTCAA...CTGGGTGGGTGATATTTTATGGAGGGAGGTGTCTGCTTCTGACTGAGGCCGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR CCA 72 bp | CAGAGCACAGACCTCATTTGTTTGCAGAGCTCAGAGTaGATGTTAACCACCAGCGTGGTGGAAGGGAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QSTDLICLQSSE*MLTTSVVEGKY Trigger: GTACTTCCCTTCCACCACGCTGGTGGTTAACATCCACTCTGAGCTCTGCAAACAAATGAGGTCTGTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| 3UTR-3UTR CAA 90 bp | AATTCTAGGTTTATACCATCACAAGTCCTCCCCTGGCCTCCTTGGGTACCTGTAGTGCCCTTTGTTAATTaGAGGTTTGGGGGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSRFIPSQVLPWPPWVPVVPFVN*RFGGGA Trigger: AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCAC...TACAGGTACCCAAGGAGGCCAGGGGAGGACTTGTGATGGTATAAACCTAGAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| 3UTR TCA 72 bp | TTCGGCCACCCAGCCTCCGTTTCTTCCCAAATCCTGTaGCCAATTTCACTTTCAGAACTCCACTGTTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FGHPASVSSQIL*PISLSELHCCS Trigger: GGAACAACAGTGGAGTTCTGAAAGTGAAATTGGTCACAGGATTTGGGAAGAAACGGAGGCTGGGTGGCCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR GCA 72 bp | CAGACACCTCCCTCCATAAAATATCACCCACCCAGATaGACATACAATGCAGTTGTAGGCTTGTGGGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: QTPPSIKYHPPR*TYNAVVGLWEP Trigger: GGGTTCCCACAAGCCTACAACTGCATTGTATGTGCATCTGGGTGGGTGATATTTTATGGAGGGAGGTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR CCA 72 bp | AGACCTGCTGAAAAGTGTCGACTTCATATTTTTCCCTaGATTGCTGGCCTCCTTTCAAAGCCTGGCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RPAEKCRLHIFP*IAGLLSKPGCS Trigger: GGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGGAAAAATATGAAGTCGACACTTTTCAGCAGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR-3UTR CAA 90 bp | GCGCATATAGTAGGCCTTCACGATCCCTGCGTGGAGAAGTGTACAGCACCCACCTGTGCATCTATTTATTaGTGTCAGAAATCAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AHIVGLHDPCVEKCTAPTCASIY*CQKSTP Trigger: TGGGGTTGATTTCTGACACAAATAAATAGATGCACA...GGTGGGTGCTGTACACTTCTCCACGCAGGGATCGTGAAGGCCTACTATATGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACCCCATTTGTAAGCAACACTGGTACATGATACAAGTGGCTGTGATAGAGCCAGAGGACCTGAGTTaGGTTCCCAACGCTCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: WNPICKQHWYMIQVAVIEPEDLS*VPNAQV Trigger: TACCTGAGCGTTGGGAACCAAACTCAGGTCCTCTGG...CTCTATCACAGCCACTTGTATCATGTACCAGTGTTGCTTACAAATGGGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR GCA 72 bp | AAAAATACTTTTAAGTTGGCACTGGAGAGAAGGTTCTaGCGCTGTGAGCACTTGCTGCTCTTCCAGAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: KNTFKLALERRF*RCEHLLLFQRT Trigger: GGTCCTCTGGAAGAGCAGCAAGTGCTCACAGCGGCAGAACCTTCTCTCCAGTGCCAACTTAAAAGTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR GCA 72 bp | CTCCATAAAATATCACCCACCCAGATGCACATACAATaGAGTTGTAGGCTTGTGGGAACCCCCTGGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LHKISPTQMHIQ*SCRLVGTPWMK Trigger: CTTCATCCAGGGGGTTCCCACAAGCCTACAACTGCATTGTATGTGCATCTGGGTGGGTGATATTTTATGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| 3UTR CCA 72 bp | CCTTTCAAAGCCTGGCTGCTCCTCCCAAATGGCTCATaGAACTACACAGCCATATGCACACTTGAAAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: PFKAWLLLPNGS*NYTAICTLEKH Trigger: ATGTTTTTCAAGTGTGCATATGGCTGTGTAGTTCCATGAGCCATTTGGGAGGAGCAGCCAGGCTTTGAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR TCA 72 bp | TATGCGCTTAAAAGTGACATCAAAGACCTGGTTAATTaGACCAGGGATGCCCAATCTATGCTTGCTGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: YALKSDIKDLVN*TRDAQSMLAAR Trigger: CCGTGCAGCAAGCATAGATTGGGCATCCCTGGTTCAATTAACCAGGTCTTTGATGTCACTTTTAAGCGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR CCA 72 bp | CCCAGGAAAGAGTGGAACCCCATTTGTAAGCAACACTaGTACATGATACAAGTGGCTGTGATAGAGACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PRKEWNPICKQH*YMIQVAVIETC Trigger: ACAAGTCTCTATCACAGCCACTTGTATCATGTACCAGTGTTGCTTACAAATGGGGTTCCACTCTTTCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR-3UTR CAA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTTGTGCATCTATTTATTaGTGTCAGAAATCAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RNGSCPVPFVNLRFGGGACASIY*CQKSTP Trigger: TGGGGTTGATTTCTGACACAAATAAATAGATGCACA...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| 3UTR TCA 72 bp | TGTTGTTTATTGATTTTTCAGAGGTTCCAGTCATCCTaGGCACAGAGCACAGACCTCATTTGTTTGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CCLLIFQRFQSS*AQSTDLICLQS Trigger: GCTCTGCAAACAAATGAGGTCTGTGCTCTGTGCTCAGGATGACTGGAACCTCTGAAAAATCAATAAACAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR GCA 72 bp | TTGTTCTTAGCGTTAGCCAAGCACCTTCTCAAATACTaGCAGAGACCTGCTGAAAAGTGTCGACTTCATATT | + |
|
Preference number: 3 (lower is better) Translates to: LFLALAKHLLKY*QRPAEKCRLHI Trigger: AATATGAAGTCGACACTTTTCAGCAGGTCTCTGGCAGTATTTGAGAAGGTGCTTGGCTAACGCTAAGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CCA 72 bp | AATACGGATATGCGCTTAAAAGTGACATCAAAGACCTaGTTAATTGAACCAGGGATGCCCAATCTATGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NTDMRLKVTSKT*LIEPGMPNLCL Trigger: CAAGCATAGATTGGGCATCCCTGGTTCAATTAACCAGGTCTTTGATGTCACTTTTAAGCGCATATCCGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS-3UTR CCA 90 bp | AGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCAGGGCTTGCACATGCCAGCTTGTaGGGTCCTTGCCCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPTDTQSIAPALAPGLAHASL*GPCPQP Trigger: TGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGC...AAGCCCTGGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS-3UTR CCA 90 bp | CAAGAGGAGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCTGGCCTCCTGGTACTTaGTGGCGGCCTGATCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEEQRAYRYPVHSPSPRPWPPGT*WRPDHS Trigger: GCTATGATCAGGCCGCCACCAAGTACCAGGAGGCCA...GGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCTCCTCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR TCA 90 bp | CAAGAGGAGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCCTGTTGCCTTCTCCATaGAGAAGAGGTACCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEEQRAYRYPVHSPSPRPLLPSP*RRGTAC Trigger: GCAGGCGGTACCTCTTCTTCATGGAGAAGGCAACAG...GGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCTCCTCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR GCA 90 bp | AGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCAGGGCTTGCCCAGCGTGTGGTATaGAAACATGTTGGCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPTDTQSIAPALAPGLAQRVV*KHVGQP Trigger: GGGTTGGCCAACATGTTTGCATACCACACGCTGGGC...AAGCCCTGGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATGCTCCGGCAGCGCTaGCGCTCCTCCTCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLAGVPRVTKVNDIQRGSMLRQR*RSSSCL Trigger: CAAACAGGAGGAGGAGCGGCAGCGCTGCCGGAGCAT...AGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGCCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR CCA 90 bp | CCTGGTACTTGGTGGCGGCCTGATCATAGCGTCCCAGCTTGTAGAGCCTGTTGCATGATGCTCATGGGCTaGCCCACCTGCTTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGTWWRPDHSVPACRACCMMLMG*PTCLLS Trigger: TGACAGCAAGCAGGTGGGCCAGCCCATGAGCATCAT...GCAACAGGCTCTACAAGCTGGGACGCTATGATCAGGCCGCCACCAAGTACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS-3UTR CCA 90 bp | TGGCTGGCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTGCACCGCCTTGCGCATaGATGGCTCCAACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLAGVPRVTKVNDIQRGSAPPCA*MAPTPA Trigger: TGCTGGAGTTGGAGCCATCCATGCGCAAGGCGGTGC...AGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGCCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR GCA 90 bp | GCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATAGCTTGTGGGGTCCTTaGCCTCAGCCACCTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGVPRVTKVNDIQRGSIDSLWGP*PQPPAA Trigger: TGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCT...ATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR CCA 90 bp | CCTGGTACTTGGTGGCGGCCTGATCATAGCGTCCCAGCTTGTAGAGCCTGTTGCGAAGACAAGAGGCTGTaGCTCTTTCTGCAGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGTWWRPDHSVPACRACCEDKRL*LFLQLI Trigger: GATGAGCTGCAGAAAGAGCCACAGCCTCTTGTCTTC...GCAACAGGCTCTACAAGCTGGGACGCTATGATCAGGCCGCCACCAAGTACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CAA 72 bp | AGAACTCCACTGTTGTTCCCACCGAGGACGCAAGCTTaGTCACCATCAGACCCTGTCCTCACACCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTPLLFPPRTQA*SPSDPVLTPDQ Trigger: CTGGTCAGGTGTGAGGACAGGGTCTGATGGTGACAAAGCTTGCGTCCTCGGTGGGAACAACAGTGGAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| CDS-3UTR GCA 90 bp | AATTCTAGGTTTATACCATCACAAGTCCTCCCCTGGCCTCCTTGGGTACCTGTATTGCCCTCAGCCACCTaGCGCAGACTGCGGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSRFIPSQVLPWPPWVPVLPSAT*RRLRDN Trigger: GTTGTCCCGCAGTCTGCGGCAGGTGGCTGAGGGCAA...TACAGGTACCCAAGGAGGCCAGGGGAGGACTTGTGATGGTATAAACCTAGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| CDS-3UTR CCA 90 bp | ATCTATGCTTGCTGCACGGGTAGCCCACGGGCTGTGAGAATGCAGAGAAGTCACGGTATGCAAACATGTTaGCCAACCCGCACGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYACCTGSPRAVRMQRSHGMQTC*PTRTCA Trigger: TGCACACGTGCGGGTTGGCCAACATGTTTGCATACC...GTGACTTCTCTGCATTCTCACAGCCCGTGGGCTACCCGTGCAGCAAGCATAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCCGTTTCTTCCCAAATCCTGTGACCAATTTCACTTTCAGAACTCCACTTTGCCCTCAGCCACCTaGCGCAGACTGCGGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPPFLPKSCDQFHFQNSTLPSAT*RRLRDN Trigger: GTTGTCCCGCAGTCTGCGGCAGGTGGCTGAGGGCAA...AGTGGAGTTCTGAAAGTGAAATTGGTCACAGGATTTGGGAAGAAACGGAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| CDS-3UTR GCA 90 bp | GCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATGGCTGTGGCTCTTTCTaGAGCTCATCCAGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGVPRVTKVNDIQRGSIDGCGSF*SSSRSS Trigger: CGAGGACCTGGATGAGCTGCAGAAAGAGCCACAGCC...ATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATCCCAGGGCTTCTCCTTaGTCTGAAGGTTCCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGVPRVTKVNDIQRGSIDPRASP*SEGSSG Trigger: GCCTGAGGAACCTTCAGACCAAGGAGAAGCCCTGGG...ATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| CDS-3UTR GCA 90 bp | CCTGCATCCTCTCTTCATTATTCAGGTTCCACGTCTCCCTCTGGTACTCATTTGGGCTGTGGCTCTTTCTaGAGCTCATCCAGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PASSLHYSGSTSPSGTHLGCGSF*SSSRSS Trigger: CGAGGACCTGGATGAGCTGCAGAAAGAGCCACAGCC...CAAATGAGTACCAGAGGGAGACGTGGAACCTGAATAATGAAGAGAGGATGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
||
| CDS-3UTR CCA 90 bp | TTTTTCAGAGGTTCCAGTCATCCTGAGCACAGAGCACAGACCTCATTTGTTTGCGCACATGCCAGCTTGTaGGGTCCTTGCCCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFRGSSHPEHRAQTSFVCAHASL*GPCPQP Trigger: TGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGC...GCAAACAAATGAGGTCTGTGCTCTGTGCTCAGGATGACTGGAACCTCTGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| CDS-3UTR CCA 90 bp | AATTCTAGGTTTATACCATCACAAGTCCTCCCCTGGCCTCCTTGGGTACCTGTACCTCCTGGTACTTGGTaGCGGCCTGATCATAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSRFIPSQVLPWPPWVPVPPGTW*RPDHSV Trigger: GACGCTATGATCAGGCCGCCACCAAGTACCAGGAGG...TACAGGTACCCAAGGAGGCCAGGGGAGGACTTGTGATGGTATAAACCTAGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
||
| CDS-3UTR CCA 90 bp | AGGAATGGTAGTTGTCCTGTGCCCTTTGTTAATTTGAGGTTTGGGGGAGGGGCTTCCTCAGGCACACAATaGCCTCCTGGTACTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGSCPVPFVNLRFGGGASSGTQ*PPGTWW Trigger: CCACCAAGTACCAGGAGGCCATTGTGTGCCTGAGGA...AGCCCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTGCTTGTAGAGCCTGTTaGCTTCTCCATGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLAGVPRVTKVNDIQRGSACRAC*LLHEEE Trigger: CTCTTCTTCATGGAGAAGGCAACAGGCTCTACAAGC...AGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGCCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR CAA 72 bp | CTGCTGAAAAGTGTCGACTTCATATTTTTCCCTGGATaGCTGGCCTCCTTTCAAAGCCTGGCTGCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSVDFIFFPG*LASFQSLAAPP Trigger: GGGAGGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGGAAAAATATGAAGTCGACACTTTTCAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| 3UTR CAA 72 bp | GTTCCAGTCATCCTGAGCACAGAGCACAGACCTCATTaGTTTGCAGAGCTCAGAGTGGATGTTAACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPVILSTEHRPH*FAELRVDVNHQ Trigger: CTGGTGGTTAACATCCACTCTGAGCTCTGCAAACAAATGAGGTCTGTGCTCTGTGCTCAGGATGACTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR GCA 90 bp | TGGAACCCCATTTGTAAGCAACACTGGTACATGATACAAGTGGCTGTGATAGAGGCCCAGCGTGTGGTATaGAAACATGTTGGCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: WNPICKQHWYMIQVAVIEAQRVV*KHVGQP Trigger: GGGTTGGCCAACATGTTTGCATACCACACGCTGGGC...CTCTATCACAGCCACTTGTATCATGTACCAGTGTTGCTTACAAATGGGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR CCA 90 bp | TGGAACCCCATTTGTAAGCAACACTGGTACATGATACAAGTGGCTGTGATAGAGATGATGCTCATGGGCTaGCCCACCTGCTTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WNPICKQHWYMIQVAVIEMMLMG*PTCLLS Trigger: TGACAGCAAGCAGGTGGGCCAGCCCATGAGCATCAT...CTCTATCACAGCCACTTGTATCATGTACCAGTGTTGCTTACAAATGGGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR CCA 90 bp | AATTCTAGGTTTATACCATCACAAGTCCTCCCCTGGCCTCCTTGGGTACCTGTAGAAGACAAGAGGCTGTaGCTCTTTCTGCAGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NSRFIPSQVLPWPPWVPVEDKRL*LFLQLI Trigger: GATGAGCTGCAGAAAGAGCCACAGCCTCTTGTCTTC...TACAGGTACCCAAGGAGGCCAGGGGAGGACTTGTGATGGTATAAACCTAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR CAA 72 bp | ACACTGGTACATGATACAAGTGGCTGTGATAGAGACTaGTGTGGAGACAGACAGACAGACAGACAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLVHDTSGCDRD*CGDRQTDRQRE Trigger: CTCTCTCTGTCTGTCTGTCTGTCTGTCTCCACACAAGTCTCTATCACAGCCACTTGTATCATGTACCAGTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| 3UTR CAA 72 bp | AATCCTGTGACCAATTTCACTTTCAGAACTCCACTGTaGTTCCCACCGAGGACGCAAGCTTTGTCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NPVTNFTFRTPL*FPPRTQALSPS Trigger: TGATGGTGACAAAGCTTGCGTCCTCGGTGGGAACAACAGTGGAGTTCTGAAAGTGAAATTGGTCACAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS-3UTR GCA 90 bp | TTTTTCAGAGGTTCCAGTCATCCTGAGCACAGAGCACAGACCTCATTTGTTTGCCATCACACTTCATTGTaGGGAAATGAAAGGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FFRGSSHPEHRAQTSFVCHHTSL*GNERSL Trigger: GAGTGACCTTTCATTTCCGCACAATGAAGTGTGATG...GCAAACAAATGAGGTCTGTGCTCTGTGCTCAGGATGACTGGAACCTCTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR GCA 90 bp | CAGCCTCCGTTTCTTCCCAAATCCTGTGACCAATTTCACTTTCAGAACTCCACTCATCACACTTCATTGTaGGGAAATGAAAGGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QPPFLPKSCDQFHFQNSTHHTSL*GNERSL Trigger: GAGTGACCTTTCATTTCCGCACAATGAAGTGTGATG...AGTGGAGTTCTGAAAGTGAAATTGGTCACAGGATTTGGGAAGAAACGGAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS-3UTR CAA 90 bp | CCCCAGGGCTTCAACCCGCAGCTCCCACCCAACCTAACCCAGTCTAACTCAGTGCAGCTTGTGGGGTCCTaGCCCTCAGCCACCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PQGFNPQLPPNLTQSNSVQLVGS*PSATCR Trigger: GCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTG...CACTGAGTTAGACTGGGTTAGGTTGGGTGGGAGCTGCGGGTTGAAGCCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 90 bp | AGCGTGTGGTATGCAAACATGTTGGCCAACCCGCACGTGTGCACATaGCAGCTTGTGGGGTCCTTGCCCTCAGCCACCTGCCGCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: SVWYANMLANPHVCT*QLVGSLPSATCRRL Trigger: CAGTCTGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATACCACACGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 90 bp | CACTTTCTCCAGGTCCGCCTTGGCCTCCTCAGCGTTCCACACCTCTaGGTGAGCACGTGCGCGCATATAGTAGGCCTTCACGATCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFLQVRLGLLSVPHL*VSTCAHIVGLHDPW Trigger: CCAGGGATCGTGAAGGCCTACTATATGCGCGCACGTGCTCACGCAGAGGTGTGGAACGCTGAGGAGGCCAAGGCGGACCTGGAGAAAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS CCA 90 bp | ATGCAAACATGTTGGCCAACCCGCACGTGTGCACATGCCAGCTTGTaGGGTCCTTGCCCTCAGCCACCTGCCGCAGACTGCGGGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: MQTCWPTRTCAHASL*GPCPQPPAADCGTT Trigger: TGTTGTCCCGCAGTCTGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CCA 90 bp | GCTCATCCAGGTCCTCGTAGCCCAGCGTGTGGTATGCAAACATGTTaGCCAACCCGCACGTGTGCACATGCCAGCTTGTGGGGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AHPGPRSPACGMQTC*PTRTCAHASLWGPC Trigger: GCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATACCACACGCTGGGCTACGAGGACCTGGATGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS-3UTR CAA 90 bp | CAAGAGGAGCAGCGTGCCTACCGATACCCAGTCCATAGCCCCAGCCCTCGCCCCTCCAGCTTGAACATGTaGCCGATGATGATGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QEEQRAYRYPVHSPSPRPSSLNM*PMMMLM Trigger: CATGAGCATCATCATCGGCAACATGTTCAAGCTGGA...GGGGCGAGGGCTGGGGCTATGGACTGGGTATCGGTAGGCACGCTGCTCCTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS-3UTR CAA 90 bp | CCCTGGATTGCTGGCCTCCTTTCAAAGCCTGGCTGCTCCTCCCAAATGGCTCATTGTGCACATGCCAGCTaGTGGGGTCCTTGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PWIAGLLSKPGCSSQMAHCAHAS*WGPCPQ Trigger: CTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACA...ATGAGCCATTTGGGAGGAGCAGCCAGGCTTTGAAAGGAGGCCAGCAATCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS CCA 90 bp | TGGGGCCTCCACCTGCAACAGTTCAATCAGGAAGACAAGAGGCTGTaGCTCTTTCTGCAGCTCATCCAGGTCCTCGTAGCCCAGCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGLHLQQFNQEDKRL*LFLQLIQVLVAQRV Trigger: CACACGCTGGGCTACGAGGACCTGGATGAGCTGCAGAAAGAGCCACAGCCTCTTGTCTTCCTGATTGAACTGTTGCAGGTGGAGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR CAA 90 bp | AGCCGCAGTTCCCTGAGCACCGCCTTGCGCATGGATGGCTCCAACTCCAGCACTTGCAGAATGGTCTTCTaGACACCCTCCACATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSLSTALRMDGSNSSTCRMVF*TPSTLR Trigger: CCTCAATGTGGAGGGTGTCAAGAAGACCATTCTGCA...AGTGCTGGAGTTGGAGCCATCCATGCGCAAGGCGGTGCTCAGGGAACTGCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS GCA 90 bp | CTCTTTCTGCAGCTCATCCAGGTCCTCGTAGCCCAGCGTGTGGTATaGAAACATGTTGGCCAACCCGCACGTGTGCACATGCCAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLQLIQVLVAQRVV*KHVGQPARVHMPAC Trigger: ACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATACCACACGCTGGGCTACGAGGACCTGGATGAGCTGCAGAAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CCA 90 bp | CACACCTCCAGCTTGAACATGTTGCCGATGATGATGCTCATGGGCTaGCCCACCTGCTTGCTGTCATCGATCACCGTGCGCTCGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HTSSLNMLPMMMLMG*PTCLLSSITVRSSS Trigger: TGATGACGAGCGCACGGTGATCGATGACAGCAAGCAGGTGGGCCAGCCCATGAGCATCATCATCGGCAACATGTTCAAGCTGGAGGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS-3UTR CAA 90 bp | ACTGGAGGCTGTGAGGCAGGAGGATCACCAGTTCCGAGTGAGCCTGGACTAGATTGGTATGCAAACATGTaGGCCAACCCGCACGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGGCEAGGSPVPSEPGLDWYANM*ANPHVC Trigger: GCACACGTGCGGGTTGGCCAACATGTTTGCATACCA...ATCTAGTCCAGGCTCACTCGGAACTGGTGATCCTCCTGCCTCACAGCCTCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS-3UTR CAA 90 bp | GCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTATCGATTGTGCACATGCCAGCTaGTGGGGTCCTTGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGVPRVTKVNDIQRGSIDCAHAS*WGPCPQ Trigger: CTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACA...ATCGATAGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS GCA 90 bp | AGCTTGAACATGTTGCCGATGATGATGCTCATGGGCTGGCCCACCTaGTTGCTGTCATCGATCACCGTGCGCTCGTCATCACACTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SLNMLPMMMLMGWPT*LLSSITVRSSSHFI Trigger: AATGAAGTGTGATGACGAGCGCACGGTGATCGATGACAGCAAGCAGGTGGGCCAGCCCATGAGCATCATCATCGGCAACATGTTCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 90 bp | TTCAGGTTCCACGTCTCCCTCTGGTACTCATTTGGGGCCTCCACCTaGAACAGTTCAATCAGGAAGACAAGAGGCTGTGGCTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRFHVSLWYSFGAST*NSSIRKTRGCGSFC Trigger: GCAGAAAGAGCCACAGCCTCTTGTCTTCCTGATTGAACTGTTGCAGGTGGAGGCCCCAAATGAGTACCAGAGGGAGACGTGGAACCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR CAA 90 bp | TGGCTGGCAGGAGTCCCCAGAGTCACCAAGGTCAATGACATTCAGAGAGGTTCTTGCAGAATGGTCTTCTaGACACCCTCCACATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WLAGVPRVTKVNDIQRGSCRMVF*TPSTLR Trigger: CCTCAATGTGGAGGGTGTCAAGAAGACCATTCTGCA...AGAACCTCTCTGAATGTCATTGACCTTGGTGACTCTGGGGACTCCTGCCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS CCA 90 bp | CCTCTCTTCATTATTCAGGTTCCACGTCTCCCTCTGGTACTCATTTaGGGCCTCCACCTGCAACAGTTCAATCAGGAAGACAAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLFIIQVPRLPLVLI*GLHLQQFNQEDKRL Trigger: CAGCCTCTTGTCTTCCTGATTGAACTGTTGCAGGTGGAGGCCCCAAATGAGTACCAGAGGGAGACGTGGAACCTGAATAATGAAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS CCA 90 bp | CGAATAAAAATCCTGCAACAGTTCAATCAGGAAGACAAGAGGCTGTaGCTCTTTCTGCAGCTCATCCAGGTCCTCGTAGCCCAGCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RIKILQQFNQEDKRL*LFLQLIQVLVAQRV Trigger: CACACGCTGGGCTACGAGGACCTGGATGAGCTGCAGAAAGAGCCACAGCCTCTTGTCTTCCTGATTGAACTGTTGCAGGATTTTTATTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS-3UTR CAA 90 bp | TGGAACCCCATTTGTAAGCAACACTGGTACATGATACAAGTGGCTGTGATAGAGTGGTATGCAAACATGTaGGCCAACCCGCACGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WNPICKQHWYMIQVAVIEWYANM*ANPHVC Trigger: GCACACGTGCGGGTTGGCCAACATGTTTGCATACCA...CTCTATCACAGCCACTTGTATCATGTACCAGTGTTGCTTACAAATGGGGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS-3UTR CAA 90 bp | CCTGCATCCTCTCTTCATTATTCAGGTTCCACGTCTCCCTCTGGTACTCATTTGTCCAGCTTGAACATGTaGCCGATGATGATGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PASSLHYSGSTSPSGTHLSSLNM*PMMMLM Trigger: CATGAGCATCATCATCGGCAACATGTTCAAGCTGGA...CAAATGAGTACCAGAGGGAGACGTGGAACCTGAATAATGAAGAGAGGATGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059082.4 |
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| CDS-3UTR CAA 90 bp | AATTCTAGGTTTATACCATCACAAGTCCTCCCCTGGCCTCCTTGGGTACCTGTATTGAGGATCAGGGTGTaGATCATCTTCTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSRFIPSQVLPWPPWVPVLRIRV*IIFSSF Trigger: GAAGCTGGAGAAGATGATCAACACCCTGATCCTCAA...TACAGGTACCCAAGGAGGCCAGGGGAGGACTTGTGATGGTATAAACCTAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS GCA 72 bp | ACCCGCACGTGTGCACATGCCAGCTTGTGGGGTCCTTaGCCTCAGCCACCTGCCGCAGACTGCGGGACAACA | + |
|
Preference number: 6 (lower is better) Translates to: TRTCAHASLWGP*PQPPAADCGTT Trigger: TGTTGTCCCGCAGTCTGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CCA 72 bp | TGTTGGCCAACCCGCACGTGTGCACATGCCAGCTTGTaGGGTCCTTGCCCTCAGCCACCTGCCGCAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: CWPTRTCAHASL*GPCPQPPAADC Trigger: GCAGTCTGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CAA 72 bp | AACCCGCACGTGTGCACATGCCAGCTTGTGGGGTCCTaGCCCTCAGCCACCTGCCGCAGACTGCGGGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: NPHVCTCQLVGS*PSATCRRLRDN Trigger: GTTGTCCCGCAGTCTGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CAA 72 bp | ACATGTTGGCCAACCCGCACGTGTGCACATGCCAGCTaGTGGGGTCCTTGCCCTCAGCCACCTGCCGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TCWPTRTCAHAS*WGPCPQPPAAD Trigger: GTCTGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CAA 90 bp | GGTATGCAAACATGTTGGCCAACCCGCACGTGTGCACATGCCAGCTaGTGGGGTCCTTGCCCTCAGCCACCTGCCGCAGACTGCGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GMQTCWPTRTCAHAS*WGPCPQPPAADCGT Trigger: TGTCCCGCAGTCTGCGGCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 72 bp | GGCCTCCTCAGCGTTCCACACCTCTGCGTGAGCACGTaGGCGCATATAGTAGGCCTTCACGATCCCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLLSVPHLCVST*AHIVGLHDPWV Trigger: CACCCAGGGATCGTGAAGGCCTACTATATGCGCGCACGTGCTCACGCAGAGGTGTGGAACGCTGAGGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS GCA 72 bp | TATGCAAACATGTTGGCCAACCCGCACGTGTGCACATaGCAGCTTGTGGGGTCCTTGCCCTCAGCCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YANMLANPHVCT*QLVGSLPSATC Trigger: GCAGGTGGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 72 bp | GTGTGGTATGCAAACATGTTGGCCAACCCGCACGTGTaGACATGCCAGCTTGTGGGGTCCTTGCCCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VWYANMLANPHV*TCQLVGSLPSA Trigger: GGCTGAGGGCAAGGACCCCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATACCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CCA 72 bp | GGTCCTCGTAGCCCAGCGTGTGGTATGCAAACATGTTaGCCAACCCGCACGTGTGCACATGCCAGCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRSPACGMQTC*PTRTCAHASLW Trigger: CCACAAGCTGGCATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATACCACACGCTGGGCTACGAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 72 bp | CAGCTCATCCAGGTCCTCGTAGCCCAGCGTGTGGTATaGAAACATGTTGGCCAACCCGCACGTGTGCACATG | + |
|
Preference number: 6 (lower is better) Translates to: QLIQVLVAQRVV*KHVGQPARVHM Trigger: CATGTGCACACGTGCGGGTTGGCCAACATGTTTGCATACCACACGCTGGGCTACGAGGACCTGGATGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CAA 72 bp | TTGCCGATGATGATGCTCATGGGCTGGCCCACCTGCTaGCTGTCATCGATCACCGTGCGCTCGTCATCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LPMMMLMGWPTC*LSSITVRSSSH Trigger: GTGTGATGACGAGCGCACGGTGATCGATGACAGCAAGCAGGTGGGCCAGCCCATGAGCATCATCATCGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 72 bp | ATGTTGCCGATGATGATGCTCATGGGCTGGCCCACCTaGTTGCTGTCATCGATCACCGTGCGCTCGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: MLPMMMLMGWPT*LLSSITVRSSS Trigger: TGATGACGAGCGCACGGTGATCGATGACAGCAAGCAGGTGGGCCAGCCCATGAGCATCATCATCGGCAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS GCA 72 bp | TGGGCTGGCCCACCTGCTTGCTGTCATCGATCACCGTaGGCTCGTCATCACACTTCATTGTGCGGAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: WAGPPACCHRSP*ARHHTSLCGNE Trigger: TTCATTTCCGCACAATGAAGTGTGATGACGAGCGCACGGTGATCGATGACAGCAAGCAGGTGGGCCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CAA 90 bp | TTGAACATGTTGCCGATGATGATGCTCATGGGCTGGCCCACCTGCTaGCTGTCATCGATCACCGTGCGCTCGTCATCACACTTCATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LNMLPMMMLMGWPTC*LSSITVRSSSHFIV Trigger: CACAATGAAGTGTGATGACGAGCGCACGGTGATCGATGACAGCAAGCAGGTGGGCCAGCCCATGAGCATCATCATCGGCAACATGTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048207.10 ENSMUST00000059082.4 |
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| CDS CAA 90 bp | TCCTCTCTTCATTATTCAGGTTCCACGTCTCCCTCTGGTACTCATTaGGGGCCTCCACCTGCAACAGTTCAATCAGGAAGACAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLHYSGSTSPSGTH*GPPPATVQSGRQEA Trigger: AGCCTCTTGTCTTCCTGATTGAACTGTTGCAGGTGGAGGCCCCAAATGAGTACCAGAGGGAGACGTGGAACCTGAATAATGAAGAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS CCA 72 bp | ATTATTCAGGTTCCACGTCTCCCTCTGGTACTCATTTaGGGCCTCCACCTGCAACAGTTCAATCAGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: IIQVPRLPLVLI*GLHLQQFNQED Trigger: GTCTTCCTGATTGAACTGTTGCAGGTGGAGGCCCCAAATGAGTACCAGAGGGAGACGTGGAACCTGAATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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| CDS CAA 72 bp | CATTATTCAGGTTCCACGTCTCCCTCTGGTACTCATTaGGGGCCTCCACCTGCAACAGTTCAATCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HYSGSTSPSGTH*GPPPATVQSGR Trigger: TCTTCCTGATTGAACTGTTGCAGGTGGAGGCCCCAAATGAGTACCAGAGGGAGACGTGGAACCTGAATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048207.10 |
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