Pregenerated sensors for AIMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029610Ensembl transcript IDs: ENSMUST00000031613.11, ENSMUST00000100483.3
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACCGCTGCACATTGGTGGGTGCTGCCCCACTGCTGCCCCCAGTCTaGTGGAGCACAGACCACAGCACCACATCTGCCACAGTGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: HRCTLVGAAPLLPPV*WSTDHSTTSATVSS Trigger: TGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGCAGACTGGGGGCAGCAGTGGGGCAGCACCCACCAATGTGCAGCGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS TCA 90 bp | CCCCAGTCTGCTGGAGCACAGACCACAGCACCACATCTGCCACAGTaGGCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: PQSAGAQTTAPHLPQ*AHFQPATGSSPKRS Trigger: ACTCCGCTTTGGGGAGGAGCCCGTGGCTGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGCAGACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 90 bp | GTAGCGTTCACAGAGCAGCCTGTGCAGCACAAGCAGGGACAGTGGTaGGGAGGCTGGGTTTGCGTTGATCACAATGTCTTTCAGCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: VAFTEQPVQHKQGQW*GGWVCVDHNVFQRP Trigger: GGGGCGCTGAAAGACATTGTGATCAACGCAAACCCAGCCTCCCCACCACTGTCCCTGCTTGTGCTGCACAGGCTGCTCTGTGAACGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 90 bp | CCTGTAGCGTTCACAGAGCAGCCTGTGCAGCACAAGCAGGGACAGTaGTGGGGAGGCTGGGTTTGCGTTGATCACAATGTCTTTCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PVAFTEQPVQHKQGQ*WGGWVCVDHNVFQR Trigger: GCGCTGAAAGACATTGTGATCAACGCAAACCCAGCCTCCCCACCACTGTCCCTGCTTGTGCTGCACAGGCTGCTCTGTGAACGCTACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS GCA 90 bp | CAGCCTGTGCAGCACAAGCAGGGACAGTGGTGGGGAGGCTGGGTTTaGGTTGATCACAATGTCTTTCAGCGCCCCATAGTCCTTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QPVQHKQGQWWGGWV*VDHNVFQRPIVLSK Trigger: CTTGGAAAGGACTATGGGGCGCTGAAAGACATTGTGATCAACGCAAACCCAGCCTCCCCACCACTGTCCCTGCTTGTGCTGCACAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 90 bp | ACAGAGCAGCCTGTGCAGCACAAGCAGGGACAGTGGTGGGGAGGCTaGGTTTGCGTTGATCACAATGTCTTTCAGCGCCCCATAGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TEQPVQHKQGQWWGG*VCVDHNVFQRPIVL Trigger: AAGGACTATGGGGCGCTGAAAGACATTGTGATCAACGCAAACCCAGCCTCCCCACCACTGTCCCTGCTTGTGCTGCACAGGCTGCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS TCA 90 bp | ATCTGTGTCTTGGGCACATTCTTCCAAATCAGAGTGAAGCCCAGCTaGTACTCGTGGCGGGACTGCTTCCTAGCCTGCTCCCCGAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: ICVLGTFFQIRVKPS*YSWRDCFLACSPKH Trigger: GTGCTTCGGGGAGCAGGCTAGGAAGCAGTCCCGCCACGAGTATCAGCTGGGCTTCACTCTGATTTGGAAGAATGTGCCCAAGACACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS TCA 90 bp | GAGCGGAACACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAAGCTaGAACATGGCGATATCCACCCAGCTATCGATGAGGGTGAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: ERNTAAFSLLLPSRS*NMAISTQLSMRVRV Trigger: CACCCTCACCCTCATCGATAGCTGGGTGGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS GCA 90 bp | GCGATATCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTATaGTTCTGGCCAAACAGAGAGAACAGGAAACGTGCGATGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: AISTQLSMRVRVTAL*FWPNRENRKRAMFP Trigger: AGGGAACATCGCACGTTTCCTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCACCCTCACCCTCATCGATAGCTGGGTGGATATCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 90 bp | TCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTATGCTTCTaGCCAAACAGAGAGAACAGGAAACGTGCGATGTTCCCTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: STQLSMRVRVTALCF*PNRENRKRAMFPSP Trigger: AGGAGAAGGGAACATCGCACGTTTCCTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCACCCTCACCCTCATCGATAGCTGGGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS GCA 90 bp | TCATACAAGCGTTTTAAAATATCATCTTGGCGAGATTCAAGGGCTTaGAAAGAAGGCTCGGATGTTTCCTGCACGTGGCCCGCGTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: SYKRFKISSWRDSRA*KEGSDVSCTWPASV Trigger: CACCGACGCGGGCCACGTGCAGGAAACATCCGAGCCTTCTTTGCAAGCCCTTGAATCTCGCCAAGATGATATTTTAAAACGCTTGTATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031613.11 |
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| CDS TCA 90 bp | TCAGCTTGCAGGATGTTGGTTACGTCCAAGTCTGCATCTGGGGTGTaGATCATCTTTGAAAGGCCATCGACTGCTGCCTTCAACTCATAC | + |
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Preference number: 5 (lower is better) Translates to: SACRMLVTSKSASGV*IIFERPSTAAFNSY Trigger: GTATGAGTTGAAGGCAGCAGTCGATGGCCTTTCAAAGATGATTCACACCCCAGATGCAGACTTGGACGTAACCAACATCCTGCAAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS GCA 90 bp | GGTGACAGCATTATGCTTCTGGCCAAACAGAGAGAACAGGAAACGTaGGATGTTCCCTTCTCCTTCAATGGGGCACATGGTTTGTACACT | + |
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Preference number: 5 (lower is better) Translates to: GDSIMLLAKQREQET*DVPFSFNGAHGLYT Trigger: AGTGTACAAACCATGTGCCCCATTGAAGGAGAAGGGAACATCGCACGTTTCCTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 90 bp | TTCCAAGCACGGAATTCAAGTCCAATGTGTTTGTGGCTAAAGTTGTaGGCTCATCAGCTTGCAGGATGTTGGTTACGTCCAAGTCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: FQARNSSPMCLWLKL*AHQLAGCWLRPSLH Trigger: ATGCAGACTTGGACGTAACCAACATCCTGCAAGCTGATGAGCCCACAACTTTAGCCACAAACACATTGGACTTGAATTCCGTGCTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 90 bp | TCGACTGCTGCCTTCAACTCATACAAGCGTTTTAAAATATCATCTTaGCGAGATTCAAGGGCTTGCAAAGAAGGCTCGGATGTTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: STAAFNSYKRFKISS*RDSRACKEGSDVSC Trigger: GCAGGAAACATCCGAGCCTTCTTTGCAAGCCCTTGAATCTCGCCAAGATGATATTTTAAAACGCTTGTATGAGTTGAAGGCAGCAGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031613.11 |
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| CDS CCA 90 bp | TCGACTGCTGCCTTCAACTCATACAAGCGTTTTAAAATATCATCTTaGCGAGATTCAAGGGCTTGCAAAGAAGGCTCGGATGTTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: STAAFNSYKRFKISS*RDSRACKEGSDVSW Trigger: CCAGGAAACATCCGAGCCTTCTTTGCAAGCCCTTGAATCTCGCCAAGATGATATTTTAAAACGCTTGTATGAGTTGAAGGCAGCAGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100483.3 |
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| CDS GCA 72 bp | GATTCAAGGGCTTGCAAAGAAGGCTCGGATGTTTCCTaGACGTGGCCCGCGTCGGTGGCGGGGCTGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: DSRACKEGSDVS*TWPASVAGLVV Trigger: GACCACCAGCCCCGCCACCGACGCGGGCCACGTGCAGGAAACATCCGAGCCTTCTTTGCAAGCCCTTGAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031613.11 |
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| CDS TCA 72 bp | GCTGGAGCACAGACCACAGCACCACATCTGCCACAGTaGGCTCATTTCCAACCAGCCACGGGCTCCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: AGAQTTAPHLPQ*AHFQPATGSSP Trigger: TGGGGAGGAGCCCGTGGCTGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 72 bp | CCTGTGCAGCACAAGCAGGGACAGTGGTGGGGAGGCTaGGTTTGCGTTGATCACAATGTCTTTCAGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PVQHKQGQWWGG*VCVDHNVFQRP Trigger: GGGGCGCTGAAAGACATTGTGATCAACGCAAACCCAGCCTCCCCACCACTGTCCCTGCTTGTGCTGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 72 bp | TTCACAGAGCAGCCTGTGCAGCACAAGCAGGGACAGTaGTGGGGAGGCTGGGTTTGCGTTGATCACAATGTC | + |
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Preference number: 6 (lower is better) Translates to: FTEQPVQHKQGQ*WGGWVCVDHNV Trigger: GACATTGTGATCAACGCAAACCCAGCCTCCCCACCACTGTCCCTGCTTGTGCTGCACAGGCTGCTCTGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS TCA 72 bp | TTGGGCACATTCTTCCAAATCAGAGTGAAGCCCAGCTaGTACTCGTGGCGGGACTGCTTCCTAGCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LGTFFQIRVKPS*YSWRDCFLACS Trigger: GGAGCAGGCTAGGAAGCAGTCCCGCCACGAGTATCAGCTGGGCTTCACTCTGATTTGGAAGAATGTGCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 72 bp | ACAGAGCAGCCTGTGCAGCACAAGCAGGGACAGTGGTaGGGAGGCTGGGTTTGCGTTGATCACAATGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TEQPVQHKQGQW*GGWVCVDHNVF Trigger: AAAGACATTGTGATCAACGCAAACCCAGCCTCCCCACCACTGTCCCTGCTTGTGCTGCACAGGCTGCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CAA 72 bp | TGGCGGGACTGCTTCCTAGCCTGCTCCCCGAAGCACTaGACAAGATTCTCGGGCACATTCTTGACAGACGAA | + |
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Preference number: 6 (lower is better) Translates to: WRDCFLACSPKH*TRFSGTFLTDE Trigger: TTCGTCTGTCAAGAATGTGCCCGAGAATCTTGTCAAGTGCTTCGGGGAGCAGGCTAGGAAGCAGTCCCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CAA 72 bp | TCCCCGAAGCACTTGACAAGATTCTCGGGCACATTCTaGACAGACGAATGTGTGTGCACAGTGGACAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SPKHLTRFSGTF*TDECVCTVDRT Trigger: GGTCCTGTCCACTGTGCACACACATTCGTCTGTCAAGAATGTGCCCGAGAATCTTGTCAAGTGCTTCGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS TCA 72 bp | ACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAAGCTaGAACATGGCGATATCCACCCAGCTATCGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: TAAFSLLLPSRS*NMAISTQLSMR Trigger: CCTCATCGATAGCTGGGTGGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 72 bp | CTATCGATGAGGGTGAGGGTGACAGCATTATGCTTCTaGCCAAACAGAGAGAACAGGAAACGTGCGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSMRVRVTALCF*PNRENRKRAMF Trigger: GAACATCGCACGTTTCCTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCACCCTCACCCTCATCGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS GCA 72 bp | CGTTTTAAAATATCATCTTGGCGAGATTCAAGGGCTTaGAAAGAAGGCTCGGATGTTTCCTGCACGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RFKISSWRDSRA*KEGSDVSCTWP Trigger: GGGCCACGTGCAGGAAACATCCGAGCCTTCTTTGCAAGCCCTTGAATCTCGCCAAGATGATATTTTAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031613.11 |
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| CDS CAA 90 bp | CCTTTCCAAGCACGGAATTCAAGTCCAATGTGTTTGTGGCTAAAGTaGTGGGCTCATCAGCTTGCAGGATGTTGGTTACGTCCAAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PFQARNSSPMCLWLK*WAHQLAGCWLRPSL Trigger: CAGACTTGGACGTAACCAACATCCTGCAAGCTGATGAGCCCACAACTTTAGCCACAAACACATTGGACTTGAATTCCGTGCTTGGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CAA 90 bp | GGATGTTGGTTACGTCCAAGTCTGCATCTGGGGTGTGAATCATCTTaGAAAGGCCATCGACTGCTGCCTTCAACTCATACAAGCGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: GCWLRPSLHLGCESS*KGHRLLPSTHTSVL Trigger: TAAAACGCTTGTATGAGTTGAAGGCAGCAGTCGATGGCCTTTCAAAGATGATTCACACCCCAGATGCAGACTTGGACGTAACCAACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS TCA 72 bp | TACGTCCAAGTCTGCATCTGGGGTGTGAATCATCTTTaGAAGGCCATCGACTGCTGCCTTCAACTCATACAA | + |
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Preference number: 6 (lower is better) Translates to: YVQVCIWGVNHL*KAIDCCLQLIQ Trigger: TTGTATGAGTTGAAGGCAGCAGTCGATGGCCTTTCAAAGATGATTCACACCCCAGATGCAGACTTGGACGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CCA 72 bp | CGGAATTCAAGTCCAATGTGTTTGTGGCTAAAGTTGTaGGCTCATCAGCTTGCAGGATGTTGGTTACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RNSSPMCLWLKL*AHQLAGCWLRP Trigger: TGGACGTAACCAACATCCTGCAAGCTGATGAGCCCACAACTTTAGCCACAAACACATTGGACTTGAATTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS CAA 72 bp | TTACGTCCAAGTCTGCATCTGGGGTGTGAATCATCTTaGAAAGGCCATCGACTGCTGCCTTCAACTCATACA | + |
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Preference number: 6 (lower is better) Translates to: LRPSLHLGCESS*KGHRLLPSTHT Trigger: TGTATGAGTTGAAGGCAGCAGTCGATGGCCTTTCAAAGATGATTCACACCCCAGATGCAGACTTGGACGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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| CDS GCA 72 bp | CGTTTTAAAATATCATCTTGGCGAGATTCAAGGGCTTaGAAAGAAGGCTCGGATGTTTCCTGGTACATCGGC | + |
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Preference number: 6 (lower is better) Translates to: RFKISSWRDSRA*KEGSDVSWYIG Trigger: GCCGATGTACCAGGAAACATCCGAGCCTTCTTTGCAAGCCCTTGAATCTCGCCAAGATGATATTTTAAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100483.3 |
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| CDS CCA 72 bp | GCCTTCAACTCATACAAGCGTTTTAAAATATCATCTTaGCGAGATTCAAGGGCTTGCAAAGAAGGCTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: AFNSYKRFKISS*RDSRACKEGSD Trigger: ATCCGAGCCTTCTTTGCAAGCCCTTGAATCTCGCCAAGATGATATTTTAAAACGCTTGTATGAGTTGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031613.11 ENSMUST00000100483.3 |
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