Pregenerated sensors for AIM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037860Ensembl transcript IDs: ENSMUST00000147604.8, ENSMUST00000151176.2, ENSMUST00000166137.3, ENSMUST00000173023.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACTCCTGCTGCCTGGCCCTGGCATTCCCCTGTACTGGGGCATATaGTCTTTGCAAGACCAAGGGCCTCTCCTCCCATTGATGACCGGC | + |
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Preference number: 1 (lower is better) Translates to: PLLLPGPGIPLYWGI*SLQDQGPLLPLMTG Trigger: GCCGGTCATCAATGGGAGGAGAGGCCCTTGGTCTTGCAAAGATCATATGCCCCAGTACAGGGGAATGCCAGGGCCAGGCAGCAGGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR GCA 90 bp | TTAGTTCATGTTGTTGTTCCTCCTATAGCGTTGCAGACCACTTGCTaGTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: LVHVVVPPIALQTTC*LGTFSSSFIRGPVF Trigger: GAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGGTCTGCAACGCTATAGGAGGAACAACAACATGAACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGTCTCTCCGACAAGGCCCTGCTGTCACATCTGCAATCCCGCCATACTTATTGCAGACCACTTGCTaGTTGGGTACTTTCTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: QASLRQGPAVTSAIPPYLLQTTC*LGTFSS Trigger: GCTAGAGAAAGTACCCAAGCAGCAAGTGGTCTGCAA...TAAGTATGGCGGGATTGCAGATGTGACAGCAGGGCCTTGTCGGAGAGACGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGTCTCTCCGACAAGGCCCTGCTGTCACATCTGCAATCCCGCCATACTTAATCTTCTGCTACATATaGAACTGGAGACACAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: QASLRQGPAVTSAIPPYLIFCYI*NWRHSS Trigger: AGAACTGTGTCTCCAGTTGCATATGTAGCAGAAGAT...TAAGTATGGCGGGATTGCAGATGTGACAGCAGGGCCTTGTCGGAGAGACGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR GCA 90 bp | CGCCATACTTATACCCTCAGTGTCTATGTAGAGAAGAATGATATCTCAAACCTTCACATCCACTCCTGCTaGCTGGCCCTGGCATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RHTYTLSVYVEKNDISNLHIHSC*LALAFP Trigger: GGGGAATGCCAGGGCCAGGCAGCAGGAGTGGATGTG...AAGGTTTGAGATATCATTCTTCTCTACATAGACACTGAGGGTATAAGTATGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR CAA 90 bp | CCTGTGTTCCATCCAATAGATGACTGTGAGCATCTGCTTCTGTACTaGTCAGTCACTGGCAGAGCCTCACAAGAGAGAGCTATATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PVFHPIDDCEHLLLY*SVTGRASQERAISG Trigger: TCCTGATATAGCTCTCTCTTGTGAGGCTCTGCCAGTGACTGACAAGTACAGAAGCAGATGCTCACAGTCATCTATTGGATGGAACACAGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCATCTGCTTCTGTACTTGTCAGTCACTGGCAGAGCCTCACAAGAGAGAGAGTGTCTGGGTTTGGTaGTTGTATATAGGATGGATC | + |
|
Preference number: 2 (lower is better) Translates to: VSICFCTCQSLAEPHKRESVWVW*LYIGWI Trigger: GATCCATCCTATATACAACCACCAAACCCAGACACT...CTCTCTCTTGTGAGGCTCTGCCAGTGACTGACAAGTACAGAAGCAGATGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCATAGTGTCTGGGTTTGGTaGTTGTATATAGGATGGATC | + |
|
Preference number: 2 (lower is better) Translates to: TCCLGTFSSSFIRGPVFHSVWVW*LYIGWI Trigger: GATCCATCCTATATACAACCACCAAACCCAGACACT...ATGGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGAATTTCACATCACATACCCCAATATCACTGATTTCTTAGTACTATCATACTCCACTCCTGCTGCCTaGCCCTGGCATTCCCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: REFHITYPNITDFLVLSYSTPAA*PWHSPV Trigger: TACAGGGGAATGCCAGGGCCAGGCAGCAGGAGTGGA...GTATGATAGTACTAAGAAATCAGTGATATTGGGGTATGTGATGTGAAATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGGATGAGGTTGTAAAATaGTATCCTCAGGTAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: AEPHKRELYQDPVSKILLDEVVK*YPQVVQ Trigger: CTGAACTACCTGAGGATAGCATTTTACAACCTCATC...CAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGAATTTCACATCACATACCCCAATATCACTGATTTCTTAGTACTATCATACCTGTACTGGGGCATATaGTCTTTGCAAGACCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: REFHITYPNITDFLVLSYLYWGI*SLQDQG Trigger: CCCTTGGTCTTGCAAAGATCATATGCCCCAGTACAG...GTATGATAGTACTAAGAAATCAGTGATATTGGGGTATGTGATGTGAAATTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAGGGGCCCTGTGTTCCATCCAATAGATGACTGTGAGCATCTGCTTCTGATATGCAATAGTGTCTaGGTTTGGTGGTTGTATATA | + |
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Preference number: 2 (lower is better) Translates to: FIRGPVFHPIDDCEHLLLICNSV*VWWLYI Trigger: TATATACAACCACCAAACCCAGACACTATTGCATAT...CAGAAGCAGATGCTCACAGTCATCTATTGGATGGAACACAGGGCCCCTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR GCA 90 bp | CGCCATACTTATACCCTCAGTGTCTATGTAGAGAAGAATGATATCTCAAACCTTGATGAGGTTGTAAAATaGTATCCTCAGGTAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: RHTYTLSVYVEKNDISNLDEVVK*YPQVVQ Trigger: CTGAACTACCTGAGGATAGCATTTTACAACCTCATC...AAGGTTTGAGATATCATTCTTCTCTACATAGACACTGAGGGTATAAGTATGGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR GCA 90 bp | CGCCATACTTATACCCTCAGTGTCTATGTAGAGAAGAATGATATCTCAAACCTTATCTTCTGCTACATATaGAACTGGAGACACAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RHTYTLSVYVEKNDISNLIFCYI*NWRHSS Trigger: AGAACTGTGTCTCCAGTTGCATATGTAGCAGAAGAT...AAGGTTTGAGATATCATTCTTCTCTACATAGACACTGAGGGTATAAGTATGGCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR CCA 90 bp | CGCCATACTTATACCCTCAGTGTCTATGTAGAGAAGAATGATATCTCAAACCTTATATGCAATAGTGTCTaGGTTTGGTGGTTGTATATA | + |
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Preference number: 2 (lower is better) Translates to: RHTYTLSVYVEKNDISNLICNSV*VWWLYI Trigger: TATATACAACCACCAAACCCAGACACTATTGCATAT...AAGGTTTGAGATATCATTCTTCTCTACATAGACACTGAGGGTATAAGTATGGCG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR GCA 72 bp | ACAGGCGTCTCTCCGACAAGGCCCTGCTGTCACATCTaGAATCCCGCCATACTTATACCCTCAGTGTCTATG | + |
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Preference number: 3 (lower is better) Translates to: TGVSPTRPCCHI*NPAILIPSVSM Trigger: CATAGACACTGAGGGTATAAGTATGGCGGGATTGCAGATGTGACAGCAGGGCCTTGTCGGAGAGACGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGCGTCTCTCCGACAAGGCCCTGCTGTCACATCTGCAATCCCGCCATACTTAGGATGGATCCCCAGGTaGGGCAGTCTTAATAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: QASLRQGPAVTSAIPPYLGWIPR*GSLNNL Trigger: TAAGTTATTAAGACTGCCCAACCTGGGGATCCATCC...TAAGTATGGCGGGATTGCAGATGTGACAGCAGGGCCTTGTCGGAGAGACGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR GCA 72 bp | GTTGTTGTTCCTCCTATAGCGTTGCAGACCACTTGCTaGTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: VVVPPIALQTTC*LGTFSSSFIRG Trigger: GCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGGTCTGCAACGCTATAGGAGGAACAACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR CCA 72 bp | AATCTTGCTGGCATATGCAATAGTGTCTGGGTTTGGTaGTTGTATATAGGATGGATCCCCAGGTTGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: NLAGICNSVWVW*LYIGWIPRLGS Trigger: ACTGCCCAACCTGGGGATCCATCCTATATACAACCACCAAACCCAGACACTATTGCATATGCCAGCAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR CCA 72 bp | CATCTTCTGCTACATATGCAACTGGAGACACAGTTCTaGGGGGTACTGGTTAGTTCATGTTGTTGTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HLLLHMQLETQF*GVLVSSCCCSS Trigger: GGAGGAACAACAACATGAACTAACCAGTACCCCCCAGAACTGTGTCTCCAGTTGCATATGTAGCAGAAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR GCA 72 bp | CATGTTGTTGTTCCTCCTATAGCGTTGCAGACCACTTaGTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: HVVVPPIALQTT*CLGTFSSSFIR Trigger: CCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGGTCTGCAACGCTATAGGAGGAACAACAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR GCA 72 bp | ATATCAGGATCCTGTCAGCAAAATCTTGCTGGCATATaGAATAGTGTCTGGGTTTGGTGGTTGTATATAGGA | + |
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Preference number: 3 (lower is better) Translates to: ISGSCQQNLAGI*NSVWVWWLYIG Trigger: TCCTATATACAACCACCAAACCCAGACACTATTGCATATGCCAGCAAGATTTTGCTGACAGGATCCTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR TCA 90 bp | CAGGCGTCTCTCCGACAAGGCCCTGCTGTCACATCTGCAATCCCGCCATACTTATCTTGTCTTCCTTCCTaGGTCTCACACTCAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QASLRQGPAVTSAIPPYLSCLPS*VSHSKG Trigger: TCCCTTTGAGTGTGAGACTCAGGAAGGAAGACAAGA...TAAGTATGGCGGGATTGCAGATGTGACAGCAGGGCCTTGTCGGAGAGACGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGCATTGTCACTGCGGGTaGCAGAGGCAGCAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: AEPHKRELYQDPVSKILLHCHCG*QRQQSS Trigger: ACTGCTCTGCTGCCTCTGCCACCCGCAGTGACAATG...CAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | ACTTGCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCATCATTGTCACTGCGGGTaGCAGAGGCAGCAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TCCLGTFSSSFIRGPVFHHCHCG*QRQQSS Trigger: ACTGCTCTGCTGCCTCTGCCACCCGCAGTGACAATG...ATGGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR TCA 90 bp | CCACTTGCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCTCTTGTCTTCCTTCCTaGGTCTCACACTCAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PLAAWVLSLAPLLGALCSSCLPS*VSHSKG Trigger: TCCCTTTGAGTGTGAGACTCAGGAAGGAAGACAAGA...GGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR GCA 90 bp | GCAGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGCTGCCACGTCGAGTGTaGTCCTGGCAATCTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: AEPHKRELYQDPVSKILLLPRRV*SWQSET Trigger: AGTTTCAGATTGCCAGGAGCACACTCGACGTGGCAG...CAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR GCA 90 bp | CCACTTGCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCGATGGCTTCCTGTTCTaGCACCATCTGTTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLAAWVLSLAPLLGALCSDGFLF*HHLFLL Trigger: CAGAAGAAACAGATGGTGGCAGAACAGGAAGCCATC...GGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR CAA 72 bp | GTTGTTCCTCCTATAGCGTTGCAGACCACTTGCTGCTaGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VVPPIALQTTCC*GTFSSSFIRGP Trigger: AGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGGTCTGCAACGCTATAGGAGGAACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR TCA 90 bp | CCACTTGCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCTCTGTAAATCTTCTCTaGTGGCTTCCTGTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAAWVLSLAPLLGALCSSVNLL*WLPVLP Trigger: TGGCAGAACAGGAAGCCATCAGAGAAGATTTACAGA...GGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR CAA 72 bp | CTTGCTGGCATATGCAATAGTGTCTGGGTTTGGTGGTaGTATATAGGATGGATCCCCAGGTTGGGCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LAGICNSVWVWW*YIGWIPRLGSL Trigger: AAGACTGCCCAACCTGGGGATCCATCCTATATACAACCACCAAACCCAGACACTATTGCATATGCCAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| 3UTR CAA 72 bp | CATCCAATAGATGACTGTGAGCATCTGCTTCTGTACTaGTCAGTCACTGGCAGAGCCTCACAAGAGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: HPIDDCEHLLLY*SVTGRASQERA Trigger: AGCTCTCTCTTGTGAGGCTCTGCCAGTGACTGACAAGTACAGAAGCAGATGCTCACAGTCATCTATTGGATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR TCA 90 bp | GCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCATCCAAGTGGCCACTGTTGCATaGAATATCTCTTGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AAWVLSLAPLLGALCSIQVATVA*NISCLP Trigger: AGGAAGACAAGAGATATTTCATGCAACAGTGGCCAC...TTGGATGGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR GCA 90 bp | GCAGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGGATGGCTTCCTGTTCTaGCACCATCTGTTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AEPHKRELYQDPVSKILLDGFLF*HHLFLL Trigger: CAGAAGAAACAGATGGTGGCAGAACAGGAAGCCATC...CAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGGCACTTTGTTTTGCTTaGGTTTCCCAGCACCAACAC | + |
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Preference number: 4 (lower is better) Translates to: AEPHKRELYQDPVSKILLALCFA*VSQHQH Trigger: GTGTTGGTGCTGGGAAACCCAAGCAAAACAAAGTGC...CAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | AGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGGCGCACTTTGTTTTGCTTaGGTTTCCCAGCACCAACAC | + |
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Preference number: 4 (lower is better) Translates to: RASQERAISGSCQQNLAGALCFA*VSQHQH Trigger: GTGTTGGTGCTGGGAAACCCAAGCAAAACAAAGTGC...GCCAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | GTGAGCATCTGCTTCTGTACTTGTCAGTCACTGGCAGAGCCTCACAAGAGAGAGAAAAATCTGTCTCCGTaGCCACTGTTGCATGAAATA | + |
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Preference number: 4 (lower is better) Translates to: VSICFCTCQSLAEPHKREKNLSP*PLLHEI Trigger: TATTTCATGCAACAGTGGCCACGGAGACAGATTTTT...CTCTCTCTTGTGAGGCTCTGCCAGTGACTGACAAGTACAGAAGCAGATGCTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | CCACTTGCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCCACAATTGTTCCACATaGCTGAATCTTCAGTTTACT | + |
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Preference number: 4 (lower is better) Translates to: PLAAWVLSLAPLLGALCSHNCST*LNLQFT Trigger: AGTAAACTGAAGATTCAGCCATGTGGAACAATTGTG...GGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGCAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | GCTGCTTGGGTACTTTCTCTAGCTCCTTTATTAGGGGCCCTGTGTTCCATCCAATCCTCTGTTATCTTCTaGACTTTAAACAGCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: AAWVLSLAPLLGALCSIQSSVIF*TLNSPF Trigger: GAATGGGCTGTTTAAAGTCCAGAAGATAACAGAGGA...TTGGATGGAACACAGGGCCCCTAATAAAGGAGCTAGAGAAAGTACCCAAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR TCA 90 bp | TGGTGGTTGTATATAGGATGGATCCCCAGGTTGGGCAGTCTTAATAACTTAATTTCTGTAAATCTTCTCTaGTGGCTTCCTGTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: WWLYIGWIPRLGSLNNLISVNLL*WLPVLP Trigger: TGGCAGAACAGGAAGCCATCAGAGAAGATTTACAGA...AATTAAGTTATTAAGACTGCCCAACCTGGGGATCCATCCTATATACAACCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR GCA 90 bp | AGGGAATTTCACATCACATACCCCAATATCACTGATTTCTTAGTACTATCATACCTGCCACGTCGAGTGTaGTCCTGGCAATCTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: REFHITYPNITDFLVLSYLPRRV*SWQSET Trigger: AGTTTCAGATTGCCAGGAGCACACTCGACGTGGCAG...GTATGATAGTACTAAGAAATCAGTGATATTGGGGTATGTGATGTGAAATTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | TGGTGGTTGTATATAGGATGGATCCCCAGGTTGGGCAGTCTTAATAACTTAATTAAAAATCTGTCTCCGTaGCCACTGTTGCATGAAATA | + |
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Preference number: 4 (lower is better) Translates to: WWLYIGWIPRLGSLNNLIKNLSP*PLLHEI Trigger: TATTTCATGCAACAGTGGCCACGGAGACAGATTTTT...AATTAAGTTATTAAGACTGCCCAACCTGGGGATCCATCCTATATACAACCACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CCA 90 bp | AGGGAATTTCACATCACATACCCCAATATCACTGATTTCTTAGTACTATCATACTCCTCTGTTATCTTCTaGACTTTAAACAGCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: REFHITYPNITDFLVLSYSSVIF*TLNSPF Trigger: GAATGGGCTGTTTAAAGTCCAGAAGATAACAGAGGA...GTATGATAGTACTAAGAAATCAGTGATATTGGGGTATGTGATGTGAAATTCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 90 bp | AAAATATTAATGGCCTTGGTCACTGCAGACGCCGCACCTGCACTTTaGATCAGGTGGTCAGCTAACTCTGTCCTATCTGCCACGTCGAGT | + |
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Preference number: 5 (lower is better) Translates to: KILMALVTADAAPAL*IRWSANSVLSATSS Trigger: ACTCGACGTGGCAGATAGGACAGAGTTAGCTGACCACCTGATTCAAAGTGCAGGTGCGGCGTCTGCAGTGACCAAGGCCATTAATATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000147604.8 ENSMUST00000151176.2 ENSMUST00000166137.3 ENSMUST00000173023.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGTGTTCCTTAAAGTCATaGTCACTGCGGGTGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: AEPHKRELYQDPVSKILLCSLKS*SLRVAE Trigger: CTCTGCCACCCGCAGTGACAATGACTTTAAGGAACA...CAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CAA 90 bp | GTGAGCATCTGCTTCTGTACTTGTCAGTCACTGGCAGAGCCTCACAAGAGAGAGAACGTGAGTCTAATCTaGTCTCCTTCCTCGCACTTT | + |
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Preference number: 5 (lower is better) Translates to: VSICFCTCQSLAEPHKRENVSLI*SPSSHF Trigger: AAAGTGCGAGGAAGGAGACAAGATTAGACTCACGTT...CTCTCTCTTGTGAGGCTCTGCCAGTGACTGACAAGTACAGAAGCAGATGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CAA 90 bp | AGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGGCAAAATATTAATGGCCTaGGTCACTGCAGACGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: RASQERAISGSCQQNLAGKILMA*VTADAA Trigger: TGCGGCGTCTGCAGTGACCAAGGCCATTAATATTTT...GCCAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CAA 90 bp | TTTATTAGGGGCCCTGTGTTCCATCCAATAGATGACTGTGAGCATCTGCTTCTGTGTTCCTTAAAGTCATaGTCACTGCGGGTGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: FIRGPVFHPIDDCEHLLLCSLKS*SLRVAE Trigger: CTCTGCCACCCGCAGTGACAATGACTTTAAGGAACA...CAGAAGCAGATGCTCACAGTCATCTATTGGATGGAACACAGGGCCCCTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 90 bp | TCATTGTCACTGCGGGTGGCAGAGGCAGCAGAGCAGTTTTCAGCTTaGCTTCTATTTTCTACCTTCTGTGTTCCTCTCTTCTTTGTATTG | + |
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Preference number: 5 (lower is better) Translates to: SLSLRVAEAAEQFSA*LLFSTFCVPLFFVL Trigger: CAATACAAAGAAGAGAGGAACACAGAAGGTAGAAAATAGAAGTCAAGCTGAAAACTGCTCTGCTGCCTCTGCCACCCGCAGTGACAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CAA 90 bp | AGAGCCTCACAAGAGAGAGCTATATCAGGATCCTGTCAGCAAAATCTTGCTGGCCCTCTCTTCTTTGTATaGGTCATGAGTTTACGTTCA | + |
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Preference number: 5 (lower is better) Translates to: RASQERAISGSCQQNLAGPLFFV*VMSLRS Trigger: TGAACGTAAACTCATGACCAATACAAAGAAGAGAGG...GCCAGCAAGATTTTGCTGACAGGATCCTGATATAGCTCTCTCTTGTGAGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CAA 90 bp | ACATACCCCAATATCACTGATTTCTTAGTACTATCATACCCACCCTCCTCCACCAACGTGAGTCTAATCTaGTCTCCTTCCTCGCACTTT | + |
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Preference number: 5 (lower is better) Translates to: TYPNITDFLVLSYPPSSTNVSLI*SPSSHF Trigger: AAAGTGCGAGGAAGGAGACAAGATTAGACTCACGTT...GGTGGAGGAGGGTGGGTATGATAGTACTAAGAAATCAGTGATATTGGGGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 90 bp | ATCTTCTGGACTTTAAACAGCCCATTCACAATTGTTCCACATGGCTaGATCTTCAGTTTACTAATCCTGGGAGTTTCCCTGGCTCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: IFWTLNSPFTIVPHG*IFSLLILGVSLALL Trigger: TAAGAGAGCCAGGGAAACTCCCAGGATTAGTAAACTGAAGATTCAGCCATGTGGAACAATTGTGAATGGGCTGTTTAAAGTCCAGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS-3UTR CAA 90 bp | TGGTGGTTGTATATAGGATGGATCCCCAGGTTGGGCAGTCTTAATAACTTAATTCCTCTCTTCTTTGTATaGGTCATGAGTTTACGTTCA | + |
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Preference number: 5 (lower is better) Translates to: WWLYIGWIPRLGSLNNLIPLFFV*VMSLRS Trigger: TGAACGTAAACTCATGACCAATACAAAGAAGAGAGG...AATTAAGTTATTAAGACTGCCCAACCTGGGGATCCATCCTATATACAACCACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 72 bp | ATGGCCTTGGTCACTGCAGACGCCGCACCTGCACTTTaGATCAGGTGGTCAGCTAACTCTGTCCTATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: MALVTADAAPAL*IRWSANSVLSA Trigger: GGCAGATAGGACAGAGTTAGCTGACCACCTGATTCAAAGTGCAGGTGCGGCGTCTGCAGTGACCAAGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000147604.8 ENSMUST00000151176.2 ENSMUST00000166137.3 ENSMUST00000173023.2 |
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| CDS GCA 72 bp | GGTCAGCTAACTCTGTCCTATCTGCCACGTCGAGTGTaGTCCTGGCAATCTGAAACTCAGTCAAAGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GQLTLSYLPRRV*SWQSETQSKQS Trigger: ACTTTGCTTTGACTGAGTTTCAGATTGCCAGGAGCACACTCGACGTGGCAGATAGGACAGAGTTAGCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000147604.8 ENSMUST00000151176.2 ENSMUST00000166137.3 ENSMUST00000173023.2 |
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| CDS CAA 72 bp | ACTGCGGGTGGCAGAGGCAGCAGAGCAGTTTTCAGCTaGACTTCTATTTTCTACCTTCTGTGTTCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: TAGGRGSRAVFS*TSIFYLLCSSL Trigger: AAGAGAGGAACACAGAAGGTAGAAAATAGAAGTCAAGCTGAAAACTGCTCTGCTGCCTCTGCCACCCGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CAA 72 bp | GTGAGTCTAATCTTGTCTCCTTCCTCGCACTTTGTTTaGCTTGGGTTTCCCAGCACCAACACCTCCATTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSLILSPSSHFV*LGFPSTNTSIV Trigger: GACAATGGAGGTGTTGGTGCTGGGAAACCCAAGCAAAACAAAGTGCGAGGAAGGAGACAAGATTAGACTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CAA 90 bp | GATGGCTTCCTGTTCTGCCACCATCTGTTTCTTCTGAGGCTTAGCTaGAGGACAGACTTCTGTAGCAGCCTGTTCCTTAAAGTCATTGTC | + |
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Preference number: 6 (lower is better) Translates to: DGFLFCHHLFLLRLS*RTDFCSSLFLKVIV Trigger: GACAATGACTTTAAGGAACAGGCTGCTACAGAAGTCTGTCCTCAAGCTAAGCCTCAGAAGAAACAGATGGTGGCAGAACAGGAAGCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 72 bp | TGGGACTTCGTGGTTAGATTCAACATCAACCACAACTaGGGAACTGGTGACCTCCATGAAGTTACTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WDFVVRFNINHN*GTGDLHEVTVP Trigger: TGGCACAGTAACTTCATGGAGGTCACCAGTTCCTCAGTTGTGGTTGATGTTGAATCTAACCACGAAGTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS GCA 72 bp | ATTCAACTTCTGGAAAATATTAATGGCCTTGGTCACTaGAGACGCCGCACCTGCACTTTGAATCAGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: IQLLENINGLGH*RRRTCTLNQVV Trigger: GACCACCTGATTCAAAGTGCAGGTGCGGCGTCTGCAGTGACCAAGGCCATTAATATTTTCCAGAAGTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000147604.8 ENSMUST00000151176.2 ENSMUST00000166137.3 ENSMUST00000173023.2 |
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| CDS CAA 72 bp | CTGTTCTGCCACCATCTGTTTCTTCTGAGGCTTAGCTaGAGGACAGACTTCTGTAGCAGCCTGTTCCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: LFCHHLFLLRLS*RTDFCSSLFLK Trigger: TTTAAGGAACAGGCTGCTACAGAAGTCTGTCCTCAAGCTAAGCCTCAGAAGAAACAGATGGTGGCAGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CAA 90 bp | GTCATTGTCACTGCGGGTGGCAGAGGCAGCAGAGCAGTTTTCAGCTaGACTTCTATTTTCTACCTTCTGTGTTCCTCTCTTCTTTGTATT | + |
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Preference number: 6 (lower is better) Translates to: VIVTAGGRGSRAVFS*TSIFYLLCSSLLCI Trigger: AATACAAAGAAGAGAGGAACACAGAAGGTAGAAAATAGAAGTCAAGCTGAAAACTGCTCTGCTGCCTCTGCCACCCGCAGTGACAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CAA 90 bp | TCAAAGAACGTGAGTCTAATCTTGTCTCCTTCCTCGCACTTTGTTTaGCTTGGGTTTCCCAGCACCAACACCTCCATTGTCCCTGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SKNVSLILSPSSHFV*LGFPSTNTSIVPVL Trigger: TAAAACAGGGACAATGGAGGTGTTGGTGCTGGGAAACCCAAGCAAAACAAAGTGCGAGGAAGGAGACAAGATTAGACTCACGTTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CCA 72 bp | CCTGGGAGTTTCCCTGGCTCTCTTAACAACGTTATTTaGGACTTCGTGGTTAGATTCAACATCAACCACAAC | + |
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Preference number: 6 (lower is better) Translates to: PGSFPGSLNNVI*DFVVRFNINHN Trigger: GTTGTGGTTGATGTTGAATCTAACCACGAAGTCCCAAATAACGTTGTTAAGAGAGCCAGGGAAACTCCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CAA 72 bp | ATCTGTCTCCGTGGCCACTGTTGCATGAAATATCTCTaGTCTTCCTTCCTGAGTCTCACACTCAAAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: ICLRGHCCMKYL*SSFLSLTLKGI Trigger: AATCCCTTTGAGTGTGAGACTCAGGAAGGAAGACAAGAGATATTTCATGCAACAGTGGCCACGGAGACAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CAA 72 bp | TTGTTTTGCTTGGGTTTCCCAGCACCAACACCTCCATaGTCCCTGTTTTATCATGTATACCATACAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: LFCLGFPAPTPP*SLFYHVYHTVL Trigger: GAGTACTGTATGGTATACATGATAAAACAGGGACAATGGAGGTGTTGGTGCTGGGAAACCCAAGCAAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS CAA 90 bp | CCTCGCACTTTGTTTTGCTTGGGTTTCCCAGCACCAACACCTCCATaGTCCCTGTTTTATCATGTATACCATACAGTACTCTATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: PRTLFCLGFPAPTPP*SLFYHVYHTVLYLF Trigger: AAAAAGATAGAGTACTGTATGGTATACATGATAAAACAGGGACAATGGAGGTGTTGGTGCTGGGAAACCCAAGCAAAACAAAGTGCGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 72 bp | ACTTTAAACAGCCCATTCACAATTGTTCCACATGGCTaGATCTTCAGTTTACTAATCCTGGGAGTTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TLNSPFTIVPHG*IFSLLILGVSL Trigger: CAGGGAAACTCCCAGGATTAGTAAACTGAAGATTCAGCCATGTGGAACAATTGTGAATGGGCTGTTTAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 72 bp | CTACCTTCTGTGTTCCTCTCTTCTTTGTATTGGTCATaGGTTTACGTTCAGCTTCTTTCTTTTTCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LPSVFLSSLYWS*VYVQLLSFSLQ Trigger: TTGAAGAGAAAAAGAAAGAAGCTGAACGTAAACTCATGACCAATACAAAGAAGAGAGGAACACAGAAGGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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| CDS TCA 72 bp | GGTGACCTCCATGAAGTTACTGTGCCAAAGGTAGTTTaGTATTTTAATTGTCCTCTTTGGGATAAATTTATC | + |
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Preference number: 6 (lower is better) Translates to: GDLHEVTVPKVV*YFNCPLWDKFI Trigger: GATAAATTTATCCCAAAGAGGACAATTAAAATATCAAACTACCTTTGGCACAGTAACTTCATGGAGGTCACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147604.8 ENSMUST00000166137.3 |
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