Pregenerated sensors for AIG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019806Ensembl transcript IDs: ENSMUST00000019942.6, ENSMUST00000105534.10, ENSMUST00000162610.8
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACTTATAGGTGATAGCCAGAATGATGGACTATGTCCGTGGCGATaGCCAGATCTCTCTGAAAGCCCCATATGTCCGATTCAGATCACC | + |
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Preference number: 1 (lower is better) Translates to: SLIGDSQNDGLCPWR*PDLSESPICPIQIT Trigger: GGTGATCTGAATCGGACATATGGGGCTTTCAGAGAGATCTGGGCATCGCCACGGACATAGTCCATCATTCTGGCTATCACCTATAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR TCA 90 bp | GAGTTTGACAGATCAAACAGAGGGATCCAAGCACACTCAGAGTTTTaGCTAAACAGATACTATTACTATACTGCGCATCTGAAGCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: EFDRSNRGIQAHSEF*LNRYYYYTAHLKQA Trigger: GGCTTGCTTCAGATGCGCAGTATAGTAATAGTATCTGTTTAGTCAAAACTCTGAGTGTGCTTGGATCCCTCTGTTTGATCTGTCAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCTATGTCCGTGGCGATaGCCAGATCTCTCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VSEEAHTKPVCFRDCCGNLCPWR*PDLSES Trigger: GCTTTCAGAGAGATCTGGGCATCGCCACGGACATAG...GTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR CAA 90 bp | TCCTCTCTCAGGGTCAGGGAGCCAGGGTTGATGCAATGTTCTCCTTaGAAGTTCTGTCTCCACACTAATGGTGTTCAGGGCCCAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: SSLRVREPGLMQCSP*KFCLHTNGVQGPKT Trigger: AGTCTTTGGGCCCTGAACACCATTAGTGTGGAGACAGAACTTCAAAGGAGAACATTGCATCAACCCTGGCTCCCTGACCCTGAGAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTGATGGACTATGTCCGTaGCGATGCCCAGATCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRDGLCP*RCPDLS Trigger: AGAGAGATCTGGGCATCGCCACGGACATAGTCCATC...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR-3UTR TCA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTATGCCCAGATCTCTCTaGAAGCCCCATATGTCCGAT | + |
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Preference number: 2 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRMPRSL*KPHMSD Trigger: ATCGGACATATGGGGCTTTCAGAGAGATCTGGGCAT...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR-3UTR GCA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCCTGGTCCTCAGTCGGTaGTCAGCATTAGTGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: HTQNQSASVTVAATTLLVLVLSR*SALVDH Trigger: GTGATCCACTAATGCTGAGCACCGACTGAGGACCAG...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR CAA 90 bp | ATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTaGACAGATCAAACAGAGGGATCCAAGCACACTCAGAGTTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: IGWFLLTVTIACGKS*TDQTEGSKHTQSFD Trigger: GTCAAAACTCTGAGTGTGCTTGGATCCCTCTGTTTGATCTGTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR GCA 72 bp | GGTGATAGCCAGAATGATGGACTATGTCCGTGGCGATaGCCAGATCTCTCTGAAAGCCCCATATGTCCGATT | + |
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Preference number: 3 (lower is better) Translates to: GDSQNDGLCPWR*PDLSESPICPI Trigger: AATCGGACATATGGGGCTTTCAGAGAGATCTGGGCATCGCCACGGACATAGTCCATCATTCTGGCTATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR GCA 72 bp | TCCGTGACTGTTGCGGCAACCACTTTATTAGTCAAGTaGACTGAGGTCCTGCACAATGACTGGTCCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SVTVAATTLLVK*TEVLHNDWSSV Trigger: GACTGAGGACCAGTCATTGTGCAGGACCTCAGTGCACTTGACTAATAAAGTGGTTGCCGCAACAGTCACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR GCA 72 bp | CACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTaGTTCCGTGACTGTTGCGGCAACCACTTTATTAGT | + |
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Preference number: 3 (lower is better) Translates to: HAVSEEAHTKPV*FRDCCGNHFIS Trigger: ACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR TCA 72 bp | CGAATCCTCCTGGGTCTACATCGTATACTAGTGTCATaGCTCCAGCCTCCTTTAAGACTGACTATGAATGCC | + |
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Preference number: 3 (lower is better) Translates to: RILLGLHRILVS*LQPPLRLTMNA Trigger: GGCATTCATAGTCAGTCTTAAAGGAGGCTGGAGTCATGACACTAGTATACGATGTAGACCCAGGAGGATTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTTGACGTCAGGGAGCCAGGGTaGATGCAATGTTCTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LDWLVFINSHDCMWEEFDVREPG*MQCSPL Trigger: CAAAGGAGAACATTGCATCAACCCTGGCTCCCTGAC...GTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAATCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR TCA 72 bp | CTGAATAGATTAAAACTGGGGTCATTTAGCATTGGCTaGCATGTTGAGTCACGCAGTCTCCGAAGAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: LNRLKLGSFSIG*HVESRSLRRST Trigger: TGTGCTTCTTCGGAGACTGCGTGACTCAACATGTCAGCCAATGCTAAATGACCCCAGTTTTAATCTATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR TCA 72 bp | CCTTTAAGACTGACTATGAATGCCTCCACCCACACCTaGCCCTCCAATTTTATCATATTCCTCAACAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: PLRLTMNASTHT*PSNFIIFLNKK Trigger: TTTCTTGTTGAGGAATATGATAAAATTGGAGGGTCAGGTGTGGGTGGAGGCATTCATAGTCAGTCTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR TCA 72 bp | AGATCAAACAGAGGGATCCAAGCACACTCAGAGTTTTaGCTAAACAGATACTATTACTATACTGCGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: RSNRGIQAHSEF*LNRYYYYTAHL Trigger: CAGATGCGCAGTATAGTAATAGTATCTGTTTAGTCAAAACTCTGAGTGTGCTTGGATCCCTCTGTTTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR GCA 72 bp | CTCAGAGTTTTGACTAAACAGATACTATTACTATACTaGGCATCTGAAGCAAGCCTGATACTATCACCACAG | + |
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Preference number: 3 (lower is better) Translates to: LRVLTKQILLLY*ASEASLILSPQ Trigger: CTGTGGTGATAGTATCAGGCTTGCTTCAGATGCGCAGTATAGTAATAGTATCTGTTTAGTCAAAACTCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR CCA 72 bp | GATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTaGGAAGAGTTTGACAGATCAAACAGAGGGATCCAA | + |
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Preference number: 3 (lower is better) Translates to: DWLVFINSHDCM*EEFDRSNRGIQ Trigger: TTGGATCCCTCTGTTTGATCTGTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR CCA 90 bp | CTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTTCTCCTTGTCGTTCTTGCTCCTaGTTCCCGCTGCCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LMVFRAQRLPGQLLPASPCRSCS*FPLPLV Trigger: GACCAGAGGCAGCGGGAACCAGGAGCAAGAACGACA...AGGAGAAGCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR TCA 90 bp | CTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTTCTCCTCACATGCCGGTGACATaGTGTATCCAGCACACCCAT | + |
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Preference number: 4 (lower is better) Translates to: LMVFRAQRLPGQLLPASPHMPVT*CIQHTH Trigger: ATGGGTGTGCTGGATACATCATGTCACCGGCATGTG...AGGAGAAGCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR TCA 90 bp | CTCCACACTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTTGACCCAAAGAAGATaGTCCTGGCTCCTGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LHTNGVQGPKTSRAAPPCLTQRR*SWLLSQ Trigger: TTGGCTCAGGAGCCAGGATCATCTTCTTTGGGTCAA...GCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAGTGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR GCA 90 bp | CTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTTCTCCTCGATGGCCTTGTAGTTaGACAGGATGGAGCAATAGG | + |
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Preference number: 4 (lower is better) Translates to: LMVFRAQRLPGQLLPASPRWPCS*TGWSNR Trigger: CCTATTGCTCCATCCTGTGCAACTACAAGGCCATCG...AGGAGAAGCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR GCA 90 bp | CATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGCAGTCAGCACACAGATaGCGAAGAACACGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HVESRSLRRSTHKTSLLPQSAHR*RRTRPG Trigger: TCCAGGCCGTGTTCTTCGGCATCTGTGTGCTGACTG...CGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR GCA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTCTGAGCTGTCGTTCTTaGTCCTGGTTCCCGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRLSCRS*SWFPLP Trigger: AGGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAG...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR GCA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTTGGCGGCGAGTCCACTaGTCCTGCTGGGATACTGAT | + |
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Preference number: 4 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRWRRVH*SCWDTD Trigger: ATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCA...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | CTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTTCTCCTCCGAAGAACACGGCCTaGATAACCAGATCAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: LMVFRAQRLPGQLLPASPPKNTA*ITRSMK Trigger: CTTCATTGATCTGGTTATCCAGGCCGTGTTCTTCGG...AGGAGAAGCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR CCA 90 bp | CTCCACACTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCATGGTTCAGCCACCCTaGGATAAAGTTGTCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LHTNGVQGPKTSRAAPPCMVQPP*DKVVKQ Trigger: TTGCTTGACAACTTTATCCCAGGGTGGCTGAACCAT...GCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAGTGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR GCA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCCGAGTCCACTGCTCCTaGTGGGATACTGATGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HTQNQSASVTVAATTLLVRVHCS*WDTDGG Trigger: CCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCG...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR TCA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTCTCCTGCTGGGATACTaGTGGTGGGATGTTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRLLLGY*WWDVLI Trigger: GATGAGAACATCCCACCATCAGTATCCCAGCAGGAG...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR GCA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCTCAGGAACTTCCAGCTaGCTCCGTAGGTCTGATGCG | + |
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Preference number: 4 (lower is better) Translates to: HTQNQSASVTVAATTLLVSGTSS*LRRSDA Trigger: CGCATCAGACCTACGGAGGCAGCTGGAAGTTCCTGA...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR GCA 90 bp | TATATAAAAGTTGTCCTCTCTCAGGGTCAGGGAGCCAGGGTTGATGCAATGTTCCTGAGCTGTCGTTCTTaGTCCTGGTTCCCGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: YIKVVLSQGQGARVDAMFLSCRS*SWFPLP Trigger: AGGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAG...GAACATTGCATCAACCCTGGCTCCCTGACCCTGAGAGAGGACAACTTTTATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| 3UTR CAA 72 bp | AGGGTCAGGGAGCCAGGGTTGATGCAATGTTCTCCTTaGAAGTTCTGTCTCCACACTAATGGTGTTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RVREPGLMQCSP*KFCLHTNGVQG Trigger: GCCCTGAACACCATTAGTGTGGAGACAGAACTTCAAAGGAGAACATTGCATCAACCCTGGCTCCCTGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR TCA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCCACATGCCGGTGACATaGTGTATCCAGCACACCCAT | + |
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Preference number: 4 (lower is better) Translates to: HTQNQSASVTVAATTLLVHMPVT*CIQHTH Trigger: ATGGGTGTGCTGGATACATCATGTCACCGGCATGTG...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR GCA 90 bp | TTTTGCAGGTATCTGTATATAAAAGTTGTCCTCTCTCAGGGTCAGGGAGCCAGGTCAGGAACTTCCAGCTaGCTCCGTAGGTCTGATGCG | + |
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Preference number: 4 (lower is better) Translates to: FCRYLYIKVVLSQGQGARSGTSS*LRRSDA Trigger: CGCATCAGACCTACGGAGGCAGCTGGAAGTTCCTGA...CCTGGCTCCCTGACCCTGAGAGAGGACAACTTTTATATACAGATACCTGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR TCA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCGATGATCCTGGCTCCTaGGCCAATATGTTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HTQNQSASVTVAATTLLVDDPGS*ANMFQE Trigger: TTCCTGGAACATATTGGCTCAGGAGCCAGGATCATC...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR TCA 90 bp | CATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGGAAGATTGGGTGTCTTaGCAAGAAGGAGCCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: HVESRSLRRSTHKTSLLPEDWVS*QEGAFV Trigger: AACAAAGGCTCCTTCTTGTCAAGACACCCAATCTTC...CGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR GCA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCCGATGGCCTTGTAGTTaGACAGGATGGAGCAATAGG | + |
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Preference number: 4 (lower is better) Translates to: HTQNQSASVTVAATTLLVRWPCS*TGWSNR Trigger: CCTATTGCTCCATCCTGTGCAACTACAAGGCCATCG...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | AGATTAATGTCTGGTTCTCCAAGCTGTGGCCTGAATAGATTAAAACTGGGGTCATGTCGTTCTTGCTCCTaGTTCCCGCTGCCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RLMSGSPSCGLNRLKLGSCRSCS*FPLPLV Trigger: GACCAGAGGCAGCGGGAACCAGGAGCAAGAACGACA...TGACCCCAGTTTTAATCTATTCAGGCCACAGCTTGGAGAACCAGACATTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | CATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGATGGTTCAGCCACCCTaGGATAAAGTTGTCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: HVESRSLRRSTHKTSLLPMVQPP*DKVVKQ Trigger: TTGCTTGACAACTTTATCCCAGGGTGGCTGAACCAT...CGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | TCCACACTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTGGAAATTCATTAGGATaGTTGTTGACCCAAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: STLMVFRAQRLPGQLLPAGNSLG*LLTQRR Trigger: TCTTCTTTGGGTCAACAACCATCCTAATGAATTTCC...AGCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAGTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR TCA 90 bp | GTGGATCACAGTTCACTTATAGGTGATAGCCAGAATGATGGACTATGTCCGTGGTTGACCCAAAGAAGATaGTCCTGGCTCCTGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLIGDSQNDGLCPWLTQRR*SWLLSQ Trigger: TTGGCTCAGGAGCCAGGATCATCTTCTTTGGGTCAA...CCACGGACATAGTCCATCATTCTGGCTATCACCTATAAGTGAACTGTGATCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | GTGGATCACAGTTCACTTATAGGTGATAGCCAGAATGATGGACTATGTCCGTGGGTTGTGTGCATTCCATaGTTCAGCCACCCTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLIGDSQNDGLCPWVVCIP*FSHPGI Trigger: TATCCCAGGGTGGCTGAACCATGGAATGCACACAAC...CCACGGACATAGTCCATCATTCTGGCTATCACCTATAAGTGAACTGTGATCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | TATATAAAAGTTGTCCTCTCTCAGGGTCAGGGAGCCAGGGTTGATGCAATGTTCGTTGTGTGCATTCCATaGTTCAGCCACCCTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: YIKVVLSQGQGARVDAMFVVCIP*FSHPGI Trigger: TATCCCAGGGTGGCTGAACCATGGAATGCACACAAC...GAACATTGCATCAACCCTGGCTCCCTGACCCTGAGAGAGGACAACTTTTATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR TCA 90 bp | AGATTAATGTCTGGTTCTCCAAGCTGTGGCCTGAATAGATTAAAACTGGGGTCAACACCCACATGCCGGTaGCATGATGTATCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: RLMSGSPSCGLNRLKLGSTPTCR*HDVSST Trigger: TGTGCTGGATACATCATGTCACCGGCATGTGGGTGT...TGACCCCAGTTTTAATCTATTCAGGCCACAGCTTGGAGAACCAGACATTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR GCA 90 bp | TTGGATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTTGACCGAGTCCACTGCTCCTaGTGGGATACTGATGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LDWLVFINSHDCMWEEFDRVHCS*WDTDGG Trigger: CCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCG...GTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAATCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR GCA 90 bp | TTGGATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTTGACTGGCGGCGAGTCCACTaGTCCTGCTGGGATACTGAT | + |
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Preference number: 4 (lower is better) Translates to: LDWLVFINSHDCMWEEFDWRRVH*SCWDTD Trigger: ATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCA...GTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAATCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR CCA 90 bp | CATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGGTTGTCAAGCAATCTTaGGTATATCATCTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HVESRSLRRSTHKTSLLPVVKQS*VYHLSV Trigger: GACAGAGAGATGATATACCCAAGATTGCTTGACAAC...CGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
||
| CDS-3UTR TCA 90 bp | TTGGATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTTGACCTCCTGCTGGGATACTaGTGGTGGGATGTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LDWLVFINSHDCMWEEFDLLLGY*WWDVLI Trigger: GATGAGAACATCCCACCATCAGTATCCCAGCAGGAG...GTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAATCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR CCA 90 bp | AGATTAATGTCTGGTTCTCCAAGCTGTGGCCTGAATAGATTAAAACTGGGGTCACCGAAGAACACGGCCTaGATAACCAGATCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLMSGSPSCGLNRLKLGSPKNTA*ITRSMK Trigger: CTTCATTGATCTGGTTATCCAGGCCGTGTTCTTCGG...TGACCCCAGTTTTAATCTATTCAGGCCACAGCTTGGAGAACCAGACATTAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTGGAAATTCATTAGGATaGTTGTTGACCCAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRGNSLG*LLTQRR Trigger: TCTTCTTTGGGTCAACAACCATCCTAATGAATTTCC...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS-3UTR CCA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCGATTTTGGACAGGTTTaGCACAGCTTAGAGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: HTQNQSASVTVAATTLLVDFGQV*HSLEKI Trigger: AATCTTCTCTAAGCTGTGCCAAACCTGTCCAAAATC...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
||
| CDS-3UTR TCA 90 bp | TTGGATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTTGACGATGATCCTGGCTCCTaGGCCAATATGTTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDWLVFINSHDCMWEEFDDDPGS*ANMFQE Trigger: TTCCTGGAACATATTGGCTCAGGAGCCAGGATCATC...GTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAATCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATCACAGTTCACTTATAGGTGATAGCCAGAATGATGGACTATGTCCGTGGTCCCACCTTCCAGCATaGATGTATCTTTACATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VDHSSLIGDSQNDGLCPWSHLPA*MYLYID Trigger: ATCTATGTAAAGATACATTCATGCTGGAAGGTGGGA...CCACGGACATAGTCCATCATTCTGGCTATCACCTATAAGTGAACTGTGATCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
||
| CDS-3UTR CCA 90 bp | AGATTAATGTCTGGTTCTCCAAGCTGTGGCCTGAATAGATTAAAACTGGGGTCATGTCATAGGCATAGATaGTCCAGAACACCGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLMSGSPSCGLNRLKLGSCHRHR*SRTPQQ Trigger: TTGTTGCGGTGTTCTGGACCATCTATGCCTATGACA...TGACCCCAGTTTTAATCTATTCAGGCCACAGCTTGGAGAACCAGACATTAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| 3UTR CAA 72 bp | TTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTaGACAGATCAAACAGAGGGATCCAAGCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLTVTIACGKS*TDQTEGSKHTQ Trigger: CTGAGTGTGCTTGGATCCCTCTGTTTGATCTGTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
||
| CDS-3UTR CCA 90 bp | AGATTAATGTCTGGTTCTCCAAGCTGTGGCCTGAATAGATTAAAACTGGGGTCATCTTTACATAGATTTTaGACAGGTTTGGCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLMSGSPSCGLNRLKLGSSLHRF*TGLAQL Trigger: AAGCTGTGCCAAACCTGTCCAAAATCTATGTAAAGA...TGACCCCAGTTTTAATCTATTCAGGCCACAGCTTGGAGAACCAGACATTAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
||
| 3UTR CAA 72 bp | CAGATCAAACAGAGGGATCCAAGCACACTCAGAGTTTaGACTAAACAGATACTATTACTATACTGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QIKQRDPSTLRV*TKQILLLYCAS Trigger: AGATGCGCAGTATAGTAATAGTATCTGTTTAGTCAAAACTCTGAGTGTGCTTGGATCCCTCTGTTTGATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR CCA 90 bp | TTGGATTGGTTGGTTTTTATTAACAGTCACGATTGCATGTGGGAAGAGTTTGACGTTGTCAAGCAATCTTaGGTATATCATCTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDWLVFINSHDCMWEEFDVVKQS*VYHLSV Trigger: GACAGAGAGATGATATACCCAAGATTGCTTGACAAC...GTCAAACTCTTCCCACATGCAATCGTGACTGTTAATAAAAACCAACCAATCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
||
| CDS-3UTR CAA 90 bp | TCCACACTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTCCTGAGCTGTCGTTCTaGCTCCTGGTTCCCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: STLMVFRAQRLPGQLLPAPELSF*LLVPAA Trigger: GGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAGG...AGCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAGTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS GCA 90 bp | AGCGTCCAGTCCCGGAGAGAGATGAGCTTCCTGAGCTGTCGTTCTTaGTCCTGGTTCCCGCTGCCTCTGGTCAGAAGACTAGAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVQSRREMSFLSCRS*SWFPLPLVRRLERS Trigger: TGACCTCTCTAGTCTTCTGACCAGAGGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAGGAAGCTCATCTCTCTCCGGGACTGGACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
||
| CDS-3UTR CAA 90 bp | CTAATGGTGTTCAGGGCCCAAAGACTTCCAGGGCAGCTCCTCCCTGCTTCTCCTAATAGGATAGCAGGATaGCTACCCGCAGCACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LMVFRAQRLPGQLLPASPNRIAG*LPAAPG Trigger: GCCAGGTGCTGCGGGTAGCAATCCTGCTATCCTATT...AGGAGAAGCAGGGAGGAGCTGCCCTGGAAGTCTTTGGGCCCTGAACACCATTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162610.8 |
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| CDS-3UTR CAA 90 bp | CATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGCCTGAGCTGTCGTTCTaGCTCCTGGTTCCCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HVESRSLRRSTHKTSLLPPELSF*LLVPAA Trigger: GGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAGG...CGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS CCA 90 bp | GTATCCAGCACACCCATAATATATAGCCCACGGAGAAGGTGCATATaGCGGCGAGTCCACTGCTCCTGCTGGGATACTGATGGTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSSTPIIYSPRRRCI*RRVHCSCWDTDGGM Trigger: CATCCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTATGGGTGTGCTGGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019942.6 ENSMUST00000162610.8 |
||
| CDS GCA 90 bp | CATGATGTATCCAGCACACCCATAATATATAGCCCACGGAGAAGGTaGATATGGCGGCGAGTCCACTGCTCCTGCTGGGATACTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HDVSSTPIIYSPRRR*IWRRVHCSCWDTDG Trigger: ACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTATGGGTGTGCTGGATACATCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019942.6 ENSMUST00000162610.8 |
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| CDS-3UTR CAA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTAATAGGATAGCAGGATaGCTACCCGCAGCACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRNRIAG*LPAAPG Trigger: GCCAGGTGCTGCGGGTAGCAATCCTGCTATCCTATT...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
||
| CDS TCA 90 bp | GAGAAGGTGCATATGGCGGCGAGTCCACTGCTCCTGCTGGGATACTaGTGGTGGGATGTTCTCATCTCGATCAATATAAAGGGCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: EKVHMAASPLLLLGY*WWDVLISINIKGKT Trigger: GGTTTTGCCCTTTATATTGATCGAGATGAGAACATCCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS GCA 90 bp | ATAATATATAGCCCACGGAGAAGGTGCATATGGCGGCGAGTCCACTaGTCCTGCTGGGATACTGATGGTGGGATGTTCTCATCTCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: IIYSPRRRCIWRRVH*SCWDTDGGMFSSRS Trigger: TGATCGAGATGAGAACATCCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACGACAAGAAGGAGCCTTaGTTCTCTGTGTATCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSEEAHTKPVCFRDCCGNDKKEP*FSVYPR Trigger: TCTGGGATACACAGAGAACAAAGGCTCCTTCTTGTC...GTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS TCA 90 bp | CTCCTGAGCCAATATGTTCCAGGAAAGGGTACACCCACATGCCGGTaGCATGATGTATCCAGCACACCCATAATATATAGCCCACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLSQYVPGKGTPTCR*HDVSSTPIIYSPRR Trigger: TCTCCGTGGGCTATATATTATGGGTGTGCTGGATACATCATGTCACCGGCATGTGGGTGTACCCTTTCCTGGAACATATTGGCTCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019942.6 ENSMUST00000162610.8 |
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| CDS CCA 90 bp | TTCTTCTTCTATACCATAATATATAGCCCACGGAGAAGGTGCATATaGCGGCGAGTCCACTGCTCCTGCTGGGATACTGATGGTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: FFFYTIIYSPRRRCI*RRVHCSCWDTDGGM Trigger: CATCCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTATGGTATAGAAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105534.10 |
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| CDS CCA 90 bp | TGTCAAGCAATCTTGGGTATATCATCTCTCTGTCATAGGCATAGATaGTCCAGAACACCGCAACAACAAAAACCCCGACAGGGAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQAILGISSLCHRHR*SRTPQQQKPRQGRP Trigger: TGGCCTTCCCTGTCGGGGTTTTTGTTGTTGCGGTGTTCTGGACCATCTATGCCTATGACAGAGAGATGATATACCCAAGATTGCTTGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS-3UTR CAA 90 bp | CACACACAAAACCAGTCTGCTTCCGTGACTGTTGCGGCAACCACTTTATTAGTCAGAAGATTGGGTGTCTaGACAAGAAGGAGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HTQNQSASVTVAATTLLVRRLGV*TRRSLC Trigger: ACAAAGGCTCCTTCTTGTCAAGACACCCAATCTTCT...GACTAATAAAGTGGTTGCCGCAACAGTCACGGAAGCAGACTGGTTTTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS CCA 90 bp | CATTCCATGGTTCAGCCACCCTGGGATAAAGTTGTCAAGCAATCTTaGGTATATCATCTCTCTGTCATAGGCATAGATGGTCCAGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HSMVQPPWDKVVKQS*VYHLSVIGIDGPEH Trigger: GTGTTCTGGACCATCTATGCCTATGACAGAGAGATGATATACCCAAGATTGCTTGACAACTTTATCCCAGGGTGGCTGAACCATGGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS-3UTR CAA 90 bp | ATGTTGAGTCACGCAGTCTCCGAAGAAGCACACACAAAACCAGTCTGCTTCCGTAGTTGTCAAGCAATCTaGGGTATATCATCTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MLSHAVSEEAHTKPVCFRSCQAI*GISSLC Trigger: ACAGAGAGATGATATACCCAAGATTGCTTGACAACT...ACGGAAGCAGACTGGTTTTGTGTGTGCTTCTTCGGAGACTGCGTGACTCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS CCA 90 bp | TATAAAGGGCAAAACCGTTGTGTGCATTCCATGGTTCAGCCACCCTaGGATAAAGTTGTCAAGCAATCTTGGGTATATCATCTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YKGQNRCVHSMVQPP*DKVVKQSWVYHLSV Trigger: GACAGAGAGATGATATACCCAAGATTGCTTGACAACTTTATCCCAGGGTGGCTGAACCATGGAATGCACACAACGGTTTTGCCCTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS-3UTR CAA 90 bp | AGATTAATGTCTGGTTCTCCAAGCTGTGGCCTGAATAGATTAAAACTGGGGTCAAGATTTTGGACAGGTTaGGCACAGCTTAGAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLMSGSPSCGLNRLKLGSRFWTG*AQLRED Trigger: ATCTTCTCTAAGCTGTGCCAAACCTGTCCAAAATCT...TGACCCCAGTTTTAATCTATTCAGGCCACAGCTTGGAGAACCAGACATTAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS CAA 90 bp | CAGCGTCCAGTCCCGGAGAGAGATGAGCTTCCTGAGCTGTCGTTCTaGCTCCTGGTTCCCGCTGCCTCTGGTCAGAAGACTAGAGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QRPVPERDELPELSF*LLVPAASGQKTREV Trigger: GACCTCTCTAGTCTTCTGACCAGAGGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAGGAAGCTCATCTCTCTCCGGGACTGGACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS GCA 72 bp | AGCCCACGGAGAAGGTGCATATGGCGGCGAGTCCACTaGTCCTGCTGGGATACTGATGGTGGGATGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SPRRRCIWRRVH*SCWDTDGGMFS Trigger: TGAGAACATCCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS CAA 72 bp | GTCCCGGAGAGAGATGAGCTTCCTGAGCTGTCGTTCTaGCTCCTGGTTCCCGCTGCCTCTGGTCAGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VPERDELPELSF*LLVPAASGQKT Trigger: AGTCTTCTGACCAGAGGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAGGAAGCTCATCTCTCTCCGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS GCA 72 bp | CGGAGAAGGTGCATATGGCGGCGAGTCCACTGCTCCTaGTGGGATACTGATGGTGGGATGTTCTCATCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRCIWRRVHCS*WDTDGGMFSSR Trigger: TCGAGATGAGAACATCCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS GCA 72 bp | TCCAGCACACCCATAATATATAGCCCACGGAGAAGGTaGATATGGCGGCGAGTCCACTGCTCCTGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSTPIIYSPRRR*IWRRVHCSCWD Trigger: ATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTATGGGTGTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019942.6 ENSMUST00000162610.8 |
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| CDS CCA 72 bp | AGAGAGATGAGCTTCCTGAGCTGTCGTTCTTGCTCCTaGTTCCCGCTGCCTCTGGTCAGAAGACTAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: REMSFLSCRSCS*FPLPLVRRLER Trigger: CCTCTCTAGTCTTCTGACCAGAGGCAGCGGGAACCAGGAGCAAGAACGACAGCTCAGGAAGCTCATCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS CCA 72 bp | ACACCCATAATATATAGCCCACGGAGAAGGTGCATATaGCGGCGAGTCCACTGCTCCTGCTGGGATACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TPIIYSPRRRCI*RRVHCSCWDTD Trigger: ATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTATGGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019942.6 ENSMUST00000162610.8 |
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| CDS TCA 72 bp | CATATGGCGGCGAGTCCACTGCTCCTGCTGGGATACTaGTGGTGGGATGTTCTCATCTCGATCAATATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HMAASPLLLLGY*WWDVLISINIK Trigger: CTTTATATTGATCGAGATGAGAACATCCCACCATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS GCA 72 bp | TTCTTCTATACCATAATATATAGCCCACGGAGAAGGTaGATATGGCGGCGAGTCCACTGCTCCTGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FFYTIIYSPRRR*IWRRVHCSCWD Trigger: ATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTATGGTATAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105534.10 |
||
| CDS CCA 72 bp | TATACCATAATATATAGCCCACGGAGAAGGTGCATATaGCGGCGAGTCCACTGCTCCTGCTGGGATACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: YTIIYSPRRRCI*RRVHCSCWDTD Trigger: ATCAGTATCCCAGCAGGAGCAGTGGACTCGCCGCCATATGCACCTTCTCCGTGGGCTATATATTATGGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105534.10 |
||
| CDS TCA 72 bp | ACAGGTTTGGCACAGCTTAGAGAAGATTGGGTGTCTTaGCAAGAAGGAGCCTTTGTTCTCTGTGTATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGLAQLREDWVS*QEGAFVLCVSQ Trigger: CTGGGATACACAGAGAACAAAGGCTCCTTCTTGTCAAGACACCCAATCTTCTCTAAGCTGTGCCAAACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
||
| CDS TCA 72 bp | CAATATGTTCCAGGAAAGGGTACACCCACATGCCGGTaGCATGATGTATCCAGCACACCCATAATATATAGC | + |
|
Preference number: 6 (lower is better) Translates to: QYVPGKGTPTCR*HDVSSTPIIYS Trigger: GCTATATATTATGGGTGTGCTGGATACATCATGTCACCGGCATGTGGGTGTACCCTTTCCTGGAACATATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019942.6 ENSMUST00000162610.8 |
||
| CDS CCA 72 bp | ATCTTGGGTATATCATCTCTCTGTCATAGGCATAGATaGTCCAGAACACCGCAACAACAAAAACCCCGACAG | + |
|
Preference number: 6 (lower is better) Translates to: ILGISSLCHRHR*SRTPQQQKPRQ Trigger: CTGTCGGGGTTTTTGTTGTTGCGGTGTTCTGGACCATCTATGCCTATGACAGAGAGATGATATACCCAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
||
| CDS CAA 72 bp | GTGTGCATTCCATGGTTCAGCCACCCTGGGATAAAGTaGTCAAGCAATCTTGGGTATATCATCTCTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VCIPWFSHPGIK*SSNLGYIISLS Trigger: TGACAGAGAGATGATATACCCAAGATTGCTTGACAACTTTATCCCAGGGTGGCTGAACCATGGAATGCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
||
| CDS TCA 72 bp | GGAAATTCATTAGGATGGTTGTTGACCCAAAGAAGATaGTCCTGGCTCCTGAGCCAATATGTTCCAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GNSLGWLLTQRR*SWLLSQYVPGK Trigger: CTTTCCTGGAACATATTGGCTCAGGAGCCAGGATCATCTTCTTTGGGTCAACAACCATCCTAATGAATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019942.6 ENSMUST00000162610.8 |
||
| CDS CCA 72 bp | GTTCAGCCACCCTGGGATAAAGTTGTCAAGCAATCTTaGGTATATCATCTCTCTGTCATAGGCATAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VQPPWDKVVKQS*VYHLSVIGIDG Trigger: ACCATCTATGCCTATGACAGAGAGATGATATACCCAAGATTGCTTGACAACTTTATCCCAGGGTGGCTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
||
| CDS CCA 72 bp | CAAAACCGTTGTGTGCATTCCATGGTTCAGCCACCCTaGGATAAAGTTGTCAAGCAATCTTGGGTATATCAT | + |
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Preference number: 6 (lower is better) Translates to: QNRCVHSMVQPP*DKVVKQSWVYH Trigger: ATGATATACCCAAGATTGCTTGACAACTTTATCCCAGGGTGGCTGAACCATGGAATGCACACAACGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019942.6 ENSMUST00000105534.10 ENSMUST00000162610.8 |
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| CDS CAA 90 bp | TGGCACAGCTTAGAGAAGATTGGGTGTCTTGACAAGAAGGAGCCTTaGTTCTCTGTGTATCCCAGATATAGCTGTTTAGTACTTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: WHSLEKIGCLDKKEP*FSVYPRYSCLVLLQ Trigger: TTGGAGAAGTACTAAACAGCTATATCTGGGATACACAGAGAACAAAGGCTCCTTCTTGTCAAGACACCCAATCTTCTCTAAGCTGTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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| CDS CAA 72 bp | TTAGAGAAGATTGGGTGTCTTGACAAGAAGGAGCCTTaGTTCTCTGTGTATCCCAGATATAGCTGTTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: LEKIGCLDKKEP*FSVYPRYSCLV Trigger: TACTAAACAGCTATATCTGGGATACACAGAGAACAAAGGCTCCTTCTTGTCAAGACACCCAATCTTCTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019942.6 |
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