Pregenerated sensors for AIF1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001864Ensembl transcript IDs: ENSMUST00000001920.13, ENSMUST00000148056.4
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTaGGGCTCGGGATTCCCAGCCTCATTAAGTCAGGTAACATGTGCT | + |
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Preference number: 1 (lower is better) Translates to: ALLYKEGRAAGSRGA*GSGFPASLSQVTCA Trigger: AGCACATGTTACCTGACTTAATGAGGCTGGGAATCCCGAGCCTCAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| 3UTR GCA 90 bp | GTATCAGGCTGGGAAATGCTGCTCTCTACCCTTTCCTTTGACCAATaGAGCCTAGAGCGGGTCTCCAGTCCACACTCTCTGATAGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: VSGWEMLLSTLSFDQ*SLERVSSPHSLIAP Trigger: GGGGGCTATCAGAGAGTGTGGACTGGAGACCCGCTCTAGGCTGCATTGGTCAAAGGAAAGGGTAGAGAGCAGCATTTCCCAGCCTGATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 90 bp | GGACAAGGGCAAGAACAAAAGGGAATCAGTTGTGTGTCTAGCCACTaGGTAGCCGCTGCTAGAAGGTCCAGCGGCACTGGAAGCATGTCC | + |
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Preference number: 1 (lower is better) Translates to: GQGQEQKGISCVSSH*VAAARRSSGTGSMS Trigger: GGACATGCTTCCAGTGCCGCTGGACCTTCTAGCAGCGGCTACTCAGTGGCTAGACACACAACTGATTCCCTTTTGTTCTTGCCCTTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR GCA 90 bp | TTGAGACCAGAGGACGAACTGGAGCTAACCATTCCATGCCCTGTTTaGTTCACTCTCTCTCTCTCTCACTGCTGTGGGAACAGCACCCTG | + |
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Preference number: 1 (lower is better) Translates to: LRPEDELELTIPCPV*FTLSLSHCCGNSTL Trigger: CAGGGTGCTGTTCCCACAGCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATGGTTAGCTCCAGTTCGTCCTCTGGTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CCA 90 bp | CATTCCATGCCCTGTTTGCTTCACTCTCTCTCTCTCTCACTGCTGTaGGAACAGCACCCTGGGTATTGGACTGTGGAACAAGAGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: HSMPCLLHSLSLSLL*EQHPGYWTVEQEPQ Trigger: CTGTGGCTCTTGTTCCACAGTCCAATACCCAGGGTGCTGTTCCCACAGCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR GCA 90 bp | CTAACCATTCCATGCCCTGTTTGCTTCACTCTCTCTCTCTCTCACTaGTGTGGGAACAGCACCCTGGGTATTGGACTGTGGAACAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: LTIPCPVCFTLSLSH*CGNSTLGIGLWNKS Trigger: GCTCTTGTTCCACAGTCCAATACCCAGGGTGCTGTTCCCACAGCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATGGTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CCA 90 bp | ACCCAAGGTGTTCCGTGGAGACCACACCTTCCTCAAGTATCAGGCTaGGAAATGCTGCTCTCTACCCTTTCCTTTGACCAATGCAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: TQGVPWRPHLPQVSG*EMLLSTLSFDQCSL Trigger: TAGGCTGCATTGGTCAAAGGAAAGGGTAGAGAGCAGCATTTCCCAGCCTGATACTTGAGGAAGGTGTGGTCTCCACGGAACACCTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CCA 90 bp | TCTCTCTCTCACTGCTGTGGGAACAGCACCCTGGGTATTGGACTGTaGAACAAGAGCCACAGGAAAAGCACATTAGCTCAACGCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SLSHCCGNSTLGIGL*NKSHRKSTLAQRFP Trigger: AGGGAAGCGTTGAGCTAATGTGCTTTTCCTGTGGCTCTTGTTCCACAGTCCAATACCCAGGGTGCTGTTCCCACAGCAGTGAGAGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CCA 90 bp | CACTCTCTCTCTCTCTCACTGCTGTGGGAACAGCACCCTGGGTATTaGACTGTGGAACAAGAGCCACAGGAAAAGCACATTAGCTCAACG | + |
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Preference number: 1 (lower is better) Translates to: HSLSLSLLWEQHPGY*TVEQEPQEKHISST Trigger: CGTTGAGCTAATGTGCTTTTCCTGTGGCTCTTGTTCCACAGTCCAATACCCAGGGTGCTGTTCCCACAGCAGTGAGAGAGAGAGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 90 bp | CACTGTGCAATCAGACAGCCTGTTCTCTGTTTGAGGTTCAACACTTaGCTCCACTTCTACCCTGGTGCCCTCAGCATCCACCCTGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: HCAIRQPVLCLRFNT*LHFYPGALSIHPES Trigger: ACTTTCAGGGTGGATGCTGAGGGCACCAGGGTAGAAGTGGAGTCAAGTGTTGAACCTCAAACAGAGAACAGGCTGTCTGATTGCACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CCA 90 bp | AAACATGGGAACGAGGTTTGCAGCCTCCCTGCCCTCTCCAGTTTTTaGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: KHGNEVCSLPALSSF*FDVSPFVQRGQSSR Trigger: CCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGGAGAGGGCAGGGAGGCTGCAAACCTCGTTCCCATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR GCA 90 bp | TCTTCCCATAGATTGATCTTCAGACCACTGCCTCTTTCTGTGCTCTaGAGAGGTCAGTGGCACACTCCTTTATGGAGGTGGTGTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: SSHRLIFRPLPLSVL*RGQWHTPLWRWCVS Trigger: GCTTACACACCACCTCCATAAAGGAGTGTGCCACTGACCTCTGCAGAGCACAGAAAGAGGCAGTGGTCTGAAGATCAATCTATGGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 90 bp | AGTACCCAAAGGTTGTTCTTTCCTCCCCACCTTGCGTCATGTCGCTaGGAATGGACAAGGGCAAGAACAAAAGGGAATCAGTTGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: STQRLFFPPHLASCR*EWTRARTKGNQLCV Trigger: GACACACAACTGATTCCCTTTTGTTCTTGCCCTTGTCCATTCTCAGCGACATGACGCAAGGTGGGGAGGAAAGAACAACCTTTGGGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR GCA 90 bp | CCCTGTCTTTTCCACTTAAGGTTTTACAGAGGCTCCTCTGACACTTaGCAAATTATGAGCCCAGCTGGAATCCCTGGGACTACATGGTAC | + |
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Preference number: 1 (lower is better) Translates to: PCLFHLRFYRGSSDT*QIMSPAGIPGTTWY Trigger: GTACCATGTAGTCCCAGGGATTCCAGCTGGGCTCATAATTTGGCAAGTGTCAGAGGAGCCTCTGTAAAACCTTAAGTGGAAAAGACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR GCA 90 bp | GGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTTaGTGCATGAATTCTTGGAAATGGTCTCTGAAGACCAGTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GSRLRFPTRVRHLIL*CMNSWKWSLKTSQE Trigger: TTCCTGACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR GCA 90 bp | TCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTTGCTaGATGAATTCTTGGAAATGGTCTCTGAAGACCAGTCAGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SRLRFPTRVRHLILC*MNSWKWSLKTSQEA Trigger: AGCTTCCTGACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 90 bp | CACACAATAATGGCACTCACCCAAATCTACCTTACAAACATCTTTTaGGTCACAGGGCAAAGCCATACTTGGCAATCCCCAAACTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: HTIMALTQIYLTNIF*VTGQSHTWQSPNCW Trigger: CCAGCAGTTTGGGGATTGCCAAGTATGGCTTTGCCCTGTGACTCAAAAGATGTTTGTAAGGTAGATTTGGGTGAGTGCCATTATTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CCA 90 bp | TTCCCCACTCGGGTAAGACATTTGATACTTTGCTGCATGAATTCTTaGAAATGGTCTCTGAAGACCAGTCAGGAAGCTGTAAGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: FPTRVRHLILCCMNS*KWSLKTSQEAVRKT Trigger: TGTCTTCCTTACAGCTTCCTGACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CCA 90 bp | ACTCGGGTAAGACATTTGATACTTTGCTGCATGAATTCTTGGAAATaGTCTCTGAAGACCAGTCAGGAAGCTGTAAGGAAGACAATCTGC | + |
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Preference number: 1 (lower is better) Translates to: TRVRHLILCCMNSWK*SLKTSQEAVRKTIC Trigger: GCAGATTGTCTTCCTTACAGCTTCCTGACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTTGCTGCAGGCAGGGGCAGGGATaGCAGCCCGGAAGGTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: AGSRLRFPTRVRHLILCCRQGQG*QPGRSG Trigger: CCCGGACCTTCCGGGCTGCCATCCCTGCCCCTGCCT...GCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGAGGCAGGGGCAGGGATaGCAGCCCGGAAGGTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: GLMLALLYKEGRAAGSRGRQGQG*QPGRSG Trigger: CCCGGACCTTCCGGGCTGCCATCCCTGCCCCTGCCT...CCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| 3UTR-3UTR GCA 90 bp | AATCTCACTGCCAACCTGGAGGCCCTCAGGAGGGTGAGTCCTGACCCAAGGTGTCTGGAGCTCTGTGCCTaGTCTGGATCTTCCGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NLTANLEALRRVSPDPRCLELCA*SGSSES Trigger: GCTCTCGGAAGATCCAGAGCAGGCACAGAGCTCCAG...ACACCTTGGGTCAGGACTCACCCTCCTGAGGGCCTCCAGGTTGGCAGTGAGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR TCA 90 bp | AATCTCACTGCCAACCTGGAGGCCCTCAGGAGGGTGAGTCCTGACCCAAGGTGTCACTCGATAAATAACTaGGGGAGTGAAGGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: NLTANLEALRRVSPDPRCHSINN*GSEGRG Trigger: TCCCCTCCCTTCACTCCCTCAGTTATTTATCGAGTG...ACACCTTGGGTCAGGACTCACCCTCCTGAGGGCCTCCAGGTTGGCAGTGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR GCA 90 bp | AATCTCACTGCCAACCTGGAGGCCCTCAGGAGGGTGAGTCCTGACCCAAGGTGTCAGGCTGGGAAATGCTaGTCTCTACCCTTTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: NLTANLEALRRVSPDPRCQAGKC*SLPFPL Trigger: CAAAGGAAAGGGTAGAGAGCAGCATTTCCCAGCCTG...ACACCTTGGGTCAGGACTCACCCTCCTGAGGGCCTCCAGGTTGGCAGTGAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTGCTCTGCAGAGGTCAGTGGCACACTCCTTTATGGAGGTGGTGTGTAAGGACACTAGGGAGCCCTaGAGCTCTGTGCCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FCALQRSVAHSFMEVVCKDTREP*SSVPAL Trigger: CAGAGCAGGCACAGAGCTCCAGGGCTCCCTAGTGTC...CTTACACACCACCTCCATAAAGGAGTGTGCCACTGACCTCTGCAGAGCACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CAA 90 bp | ATGGGAACGAGGTTTGCAGCCTCCCTGCCCTCTCCAGTTTTTGGTTaGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: MGTRFAASLPSPVFG*MLALLYKEGRAAGS Trigger: GCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGGAGAGGGCAGGGAGGCTGCAAACCTCGTTCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGGAGACCTAACACAATaGGTCAAGATGGCAGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: GLMLALLYKEGRAAGSRGGDLTQ*VKMAER Trigger: GCGCTCTGCCATCTTGACTCATTGTGTTAGGTCTCC...CCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTGCTCTGCAGAGGTCAGTGGCACACTCCTTTATGGAGGTGGTGTGTAAGCTCTCTCTCTCTCACTaGTGTGGGAACAGCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: FCALQRSVAHSFMEVVCKLSLSH*CGNSTL Trigger: CAGGGTGCTGTTCCCACAGCAGTGAGAGAGAGAGAG...CTTACACACCACCTCCATAAAGGAGTGTGCCACTGACCTCTGCAGAGCACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTAACCATTCCATGCCCTGTTTGCTTCACTCTCTCTCTCTCTCACTGCTGATTACACTGTCCCTCTaGGCTGTCTGTAAAGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: GANHSMPCLLHSLSLSLLITLSL*AVCKGA Trigger: CGCTCCTTTACAGACAGCTCAGAGGGACAGTGTAAT...CAGCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATGGTTAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTTGCTGCTTGAGGTTCAACACTTaGCTCCACTTCTACCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: AGSRLRFPTRVRHLILCCLRFNT*LHFYPG Trigger: ACCAGGGTAGAAGTGGAGTCAAGTGTTGAACCTCAA...GCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCATACTTGGCAATCCCCAAACTGCTGGTTACACCAGTTACATTTGGTCTCATGGGAACGAGGTTTaGAGCCTCCCTGCCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KAILGNPQTAGYTSYIWSHGNEV*SLPALS Trigger: GGAGAGGGCAGGGAGGCTGCAAACCTCGTTCCCATG...AGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGTTTTTGGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGGGAGACCTAACACAATaGGTCAAGATGGCAGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: PVFGLMLALLYKEGRAAGGDLTQ*VKMAER Trigger: GCGCTCTGCCATCTTGACTCATTGTGTTAGGTCTCC...CCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCATACTTGGCAATCCCCAAACTGCTGGTTACACCAGTTACATTTGGTCTACTCCCTCACACCACTaGCCTCACCTCTGCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: KAILGNPQTAGYTSYIWSTPSHH*PHLCLQ Trigger: TTGGAGGCAGAGGTGAGGTCAGTGGTGTGAGGGAGT...AGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CAA 90 bp | CCATGTTACCTCCATCTAATCCCCAAGCTCCAGGACTTGAGGGATTaGAAAAGGGAGCTAGGAGTTGGACATAGCACACATGGAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: PCYLHLIPKLQDLRD*KRELGVGHSTHGDK Trigger: TTTGTCTCCATGTGTGCTATGTCCAACTCCTAGCTCCCTTTTCAAATCCCTCAAGTCCTGGAGCTTGGGGATTAGATGGAGGTAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CAA 90 bp | AGGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTaGCTGCATGAATTCTTGGAAATGGTCTCTGAAGACCAGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RVKAEVPHSGKTFDT*LHEFLEMVSEDQSG Trigger: TCCTGACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CAA 90 bp | ACACAAGCAGGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTaGATACTTTGCTGCATGAATTCTTGGAAATGGTCTCTGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: TQAGSRLRFPTRVRH*ILCCMNSWKWSLKT Trigger: GGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCCTGCTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR CCA 90 bp | AAACTTCAACTAGACTGTGCATTTGAAGCAGCTCCTAGGGCTGAAAATCAGCCAGGCCCTCTTCAAACATaGGAACGAGGTTTGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: KLQLDCAFEAAPRAENQPGPLQT*ERGLQP Trigger: AGGCTGCAAACCTCGTTCCCATGTTTGAAGAGGGCC...TGGCTGATTTTCAGCCCTAGGAGCTGCTTCAAATGCACAGTCTAGTTGAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR GCA 90 bp | AAACTTCAACTAGACTGTGCATTTGAAGCAGCTCCTAGGGCTGAAAATCAGCCATCTAGCAAGGGACAGTaGCATTACACTGTCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KLQLDCAFEAAPRAENQPSSKGQ*HYTVPL Trigger: CAGAGGGACAGTGTAATGGCACTGTCCCTTGCTAGA...TGGCTGATTTTCAGCCCTAGGAGCTGCTTCAAATGCACAGTCTAGTTGAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CAA 90 bp | GTTCCCCACTCGGGTAAGACATTTGATACTTTGCTGCATGAATTCTaGGAAATGGTCTCTGAAGACCAGTCAGGAAGCTGTAAGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VPHSGKTFDTLLHEF*EMVSEDQSGSCKED Trigger: GTCTTCCTTACAGCTTCCTGACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CAA 90 bp | AGCCATACTTGGCAATCCCCAAACTGCTGGTTACACCAGTTACATTaGGTCTTTTTCAGAAATAAGGCAGCCGATGTCCCAAGAAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SHTWQSPNCWLHQLH*VFFRNKAADVPRKL Trigger: TAGCTTTCTTGGGACATCGGCTGCCTTATTTCTGAAAAAGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR CAA 90 bp | AATCTACCTTACAAACATCTTTTGAGTCACAGGGCAAAGCCATACTaGGCAATCCCCAAACTGCTGGTTACACCAGTTACATTTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: NLPYKHLLSHRAKPY*AIPKLLVTPVTFGL Trigger: AAGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTTGCCCTGTGACTCAAAAGATGTTTGTAAGGTAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR-3UTR CCA 90 bp | CAATCCCCAAACTGCTGGTTACACCAGTTACATTTGGTCTTTTTCAGAAATAAGATGAATTCTTGGAAATaGTCTCTGAAGACCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: QSPNCWLHQLHLVFFRNKMNSWK*SLKTSQ Trigger: CTGACTGGTCTTCAGAGACCATTTCCAAGAATTCAT...CTTATTTCTGAAAAAGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 72 bp | CACTGCCAACCTGGAGGCCCTCAGGAGGGTGAGTCCTaGCCCAAGGTGTTCCGTGGAGACCACACCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HCQPGGPQEGES*PKVFRGDHTFL Trigger: GAGGAAGGTGTGGTCTCCACGGAACACCTTGGGTCAGGACTCACCCTCCTGAGGGCCTCCAGGTTGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 72 bp | GAAATCTCACTGCCAACCTGGAGGCCCTCAGGAGGGTaGGTCCTGACCCAAGGTGTTCCGTGGAGACCACAC | + |
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Preference number: 3 (lower is better) Translates to: EISLPTWRPSGG*VLTQGVPWRPH Trigger: GTGTGGTCTCCACGGAACACCTTGGGTCAGGACTCACCCTCCTGAGGGCCTCCAGGTTGGCAGTGAGATTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 72 bp | AGTCCACTGGGGCATAACCCAGGAGACCTAACACAATaGGTCAAGATGGCAGAGCGCAGAGGGAGAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SPLGHNPGDLTQ*VKMAERRGRGR Trigger: CCTGCCTCTCCCTCTGCGCTCTGCCATCTTGACTCATTGTGTTAGGTCTCCTGGGTTATGCCCCAGTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| 3UTR GCA 72 bp | ACCACTGACCTCACCTCTGCCTCCAAACCCCTCTACTaGTCTAGCAAGGGACAGTGCCATTACACTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: TTDLTSASKPLY*SSKGQCHYTVP Trigger: AGGGACAGTGTAATGGCACTGTCCCTTGCTAGAGCAGTAGAGGGGTTTGGAGGCAGAGGTGAGGTCAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| 3UTR TCA 72 bp | GCTCTAGCAAGGGACAGTGCCATTACACTGTCCCTCTaGGCTGTCTGTAAAGGAGCGGTTCCTTCTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ALARDSAITLSL*AVCKGAVPSGS Trigger: GGAACCAGAAGGAACCGCTCCTTTACAGACAGCTCAGAGGGACAGTGTAATGGCACTGTCCCTTGCTAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR TCA 72 bp | ATCAGGCTGGGAAATGCTGCTCTCTACCCTTTCCTTTaGCCAATGCAGCCTAGAGCGGGTCTCCAGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: IRLGNAALYPFL*PMQPRAGLQST Trigger: TGTGGACTGGAGACCCGCTCTAGGCTGCATTGGTCAAAGGAAAGGGTAGAGAGCAGCATTTCCCAGCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR GCA 72 bp | TGGGAAATGCTGCTCTCTACCCTTTCCTTTGACCAATaGAGCCTAGAGCGGGTCTCCAGTCCACACTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WEMLLSTLSFDQ*SLERVSSPHSL Trigger: CAGAGAGTGTGGACTGGAGACCCGCTCTAGGCTGCATTGGTCAAAGGAAAGGGTAGAGAGCAGCATTTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTAGGCTTGGTGCTTACTGAAATCTCACTGCCAACCTGGAGGCCCTCAGGACCCAAGCTCCAGGACTaGAGGGATTTGAAAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLGLVLTEISLPTWRPSGPKLQD*RDLKRE Trigger: CTCCCTTTTCAAATCCCTCAAGTCCTGGAGCTTGGG...TCCTGAGGGCCTCCAGGTTGGCAGTGAGATTTCAGTAAGCACCAAGCCTAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR TCA 72 bp | CAAGAACAAAAGGGAATCAGTTGTGTGTCTAGCCACTaGGTAGCCGCTGCTAGAAGGTCCAGCGGCACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QEQKGISCVSSH*VAAARRSSGTG Trigger: TCCAGTGCCGCTGGACCTTCTAGCAGCGGCTACTCAGTGGCTAGACACACAACTGATTCCCTTTTGTTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR TCA 72 bp | AGGAAGACAATCTGCAAAGCTAGGCTTGGTGCTTACTaGAATCTCACTGCCAACCTGGAGGCCCTCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RKTICKARLGAY*NLTANLEALRR Trigger: CCTCCTGAGGGCCTCCAGGTTGGCAGTGAGATTTCAGTAAGCACCAAGCCTAGCTTTGCAGATTGTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR TCA 72 bp | TGGCACACTCCTTTATGGAGGTGGTGTGTAAGCTCATaGGTTGTGGACCCACTGAGCCGGCTGATTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WHTPLWRWCVSS*VVDPLSRLILP Trigger: AGGAAGAATCAGCCGGCTCAGTGGGTCCACAACTCATGAGCTTACACACCACCTCCATAAAGGAGTGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR GCA 72 bp | GAGGACGAACTGGAGCTAACCATTCCATGCCCTGTTTaGTTCACTCTCTCTCTCTCTCACTGCTGTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EDELELTIPCPV*FTLSLSHCCGN Trigger: GTTCCCACAGCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATGGTTAGCTCCAGTTCGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | AATCTCACTGCCAACCTGGAGGCCCTCAGGAGGGTGAGTCCTGACCCAAGGTGTTCTCCAGTTTTTGGTTaGATGTTAGCCCTTTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: NLTANLEALRRVSPDPRCSPVFG*MLALLY Trigger: GTACAAAAGGGCTAACATCAAACCAAAAACTGGAGA...ACACCTTGGGTCAGGACTCACCCTCCTGAGGGCCTCCAGGTTGGCAGTGAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTCAACTAGACTGTGCATTTGAAGCAGCTCCTAGGGCTGAAAATCAGCCAACATGGGAACGAGGTTaGCAGCCTCCCTGCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KLQLDCAFEAAPRAENQPTWERG*QPPCPL Trigger: GAGAGGGCAGGGAGGCTGCAAACCTCGTTCCCATGT...TGGCTGATTTTCAGCCCTAGGAGCTGCTTCAAATGCACAGTCTAGTTGAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR TCA 72 bp | ATCAGACAGCCTGTTCTCTGTTTGAGGTTCAACACTTaGCTCCACTTCTACCCTGGTGCCCTCAGCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: IRQPVLCLRFNT*LHFYPGALSIH Trigger: GTGGATGCTGAGGGCACCAGGGTAGAAGTGGAGTCAAGTGTTGAACCTCAAACAGAGAACAGGCTGTCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR GCA 72 bp | TTGAGACCAGAGGACGAACTGGAGCTAACCATTCCATaGCCTGTTTGCTTCACTCTCTCTCTCTCTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRPEDELELTIP*PVCFTLSLSHC Trigger: GCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATGGTTAGCTCCAGTTCGTCCTCTGGTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR GCA 72 bp | AGATTGATCTTCAGACCACTGCCTCTTTCTGTGCTCTaGAGAGGTCAGTGGCACACTCCTTTATGGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLIFRPLPLSVL*RGQWHTPLWRW Trigger: CCACCTCCATAAAGGAGTGTGCCACTGACCTCTGCAGAGCACAGAAAGAGGCAGTGGTCTGAAGATCAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAGTAAATGGTTCCAGAACACAAGCAGGGTCAAGGCTGAGGTTCCCCACTTTGATGTTAGCCCTTTaGTACAAAGAGGGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PRVNGSRTQAGSRLRFPTLMLAL*YKEGRA Trigger: TGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAA...AGTGGGGAACCTCAGCCTTGACCCTGCTTGTGTTCTGGAACCATTTACTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTTGCTGCTCTGCAAAGCTAGGCTaGGTGCTTACTGAAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AGSRLRFPTRVRHLILCCSAKLG*VLTEIS Trigger: TGAGATTTCAGTAAGCACCAAGCCTAGCTTTGCAGA...GCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR TCA 72 bp | AGGTTGTTCTTTCCTCCCCACCTTGCGTCATGTCGCTaGGAATGGACAAGGGCAAGAACAAAAGGGAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLFFPPHLASCR*EWTRARTKGNQ Trigger: CTGATTCCCTTTTGTTCTTGCCCTTGTCCATTCTCAGCGACATGACGCAAGGTGGGGAGGAAAGAACAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGTGCTCTGCAGAGGTCAGTGGCACACTCCTTTATGGAGGTGGTGTGTAAGACTCGGGTAAGACATTaGATACTTTGCTGCATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FCALQRSVAHSFMEVVCKTRVRH*ILCCMN Trigger: ATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGT...CTTACACACCACCTCCATAAAGGAGTGTGCCACTGACCTCTGCAGAGCACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTAACCATTCCATGCCCTGTTTGCTTCACTCTCTCTCTCTCTCACTGCTGTCATTGAGCAGGTGCTaGATAAATATGTGTGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: GANHSMPCLLHSLSLSLLSLSRC*INMCDE Trigger: CTCATCACACATATTTATCAAGCACCTGCTCAATGA...CAGCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATGGTTAGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCCATACTTGGCAATCCCCAAACTGCTGGTTACACCAGTTACATTTGGTCTCATTCCATGCCCTGTTaGCTTCACTCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KAILGNPQTAGYTSYIWSHSMPC*LHSLSL Trigger: GAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATG...AGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTGCGTCATGTCGCTGAGAATGGACAAGGGCAAGAACAAAAGGGAATCAGTTCTTCCGAGAGCAGCTaGCAGCCTGAATTTAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: TLRHVAENGQGQEQKGISSSESS*QPEFNL Trigger: TAAATTAAATTCAGGCTGCAAGCTGCTCTCGGAAGA...ACTGATTCCCTTTTGTTCTTGCCCTTGTCCATTCTCAGCGACATGACGCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR TCA 72 bp | ATGGCACTCACCCAAATCTACCTTACAAACATCTTTTaGGTCACAGGGCAAAGCCATACTTGGCAATCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MALTQIYLTNIF*VTGQSHTWQSP Trigger: TGGGGATTGCCAAGTATGGCTTTGCCCTGTGACTCAAAAGATGTTTGTAAGGTAGATTTGGGTGAGTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR GCA 72 bp | CTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTTaGTGCATGAATTCTTGGAAATGGTCTCTGAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LRFPTRVRHLIL*CMNSWKWSLKT Trigger: GGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR GCA 72 bp | GTCACAGGGCAAAGCCATACTTGGCAATCCCCAAACTaGTGGTTACACCAGTTACATTTGGTCTTTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VTGQSHTWQSPN*WLHQLHLVFFR Trigger: TCTGAAAAAGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTTGCCCTGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CCA 72 bp | GGCAATCCCCAAACTGCTGGTTACACCAGTTACATTTaGTCTTTTTCAGAAATAAGGCAGCCGATGTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GNPQTAGYTSYI*SFSEIRQPMSQ Trigger: TTGGGACATCGGCTGCCTTATTTCTGAAAAAGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR GCA 72 bp | AGGTTCCCCACTCGGGTAAGACATTTGATACTTTGCTaGATGAATTCTTGGAAATGGTCTCTGAAGACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RFPTRVRHLILC*MNSWKWSLKTS Trigger: ACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CCA 72 bp | ACAGGGCAAAGCCATACTTGGCAATCCCCAAACTGCTaGTTACACCAGTTACATTTGGTCTTTTTCAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGQSHTWQSPNC*LHQLHLVFFRN Trigger: ATTTCTGAAAAAGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTTGCCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CCA 72 bp | AGACATTTGATACTTTGCTGCATGAATTCTTGGAAATaGTCTCTGAAGACCAGTCAGGAAGCTGTAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RHLILCCMNSWK*SLKTSQEAVRK Trigger: CTTCCTTACAGCTTCCTGACTGGTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS-3UTR CCA 90 bp | GTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGAGGGTCTCGCTCTGGAGGTaGGCCAGCTGGCTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPFVQRGQSSREQRGLRVSLWR*ASWLRA Trigger: AGCCCGAAGCCAGCTGGCCCACCTCCAGAGCGAGAC...CCTCAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
||
| CDS-3UTR TCA 90 bp | GTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGAGGTCTCCTGCCGGGCTTTaGGCAAACCGAACGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSPFVQRGQSSREQRGLRSPAGL*ANRTPS Trigger: GGAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGA...CCTCAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
||
| CDS-3UTR TCA 90 bp | GATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGAGGAGATGGTGTCACTaGCACCCCCTGTCACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DVSPFVQRGQSSREQRGLRRWCH*HPLSPP Trigger: CGGAGGTGACAGGGGGTGTCAGTGACACCATCTCCT...CAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
||
| CDS-3UTR GCA 90 bp | GTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGAGGCAGCTGGCTTCGGGCTaGTCTCGTTGGCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSPFVQRGQSSREQRGLRQLASG*SRWLFL Trigger: AAGGAAAAGCCAACGAGAGCAGCCCGAAGCCAGCTG...CCTCAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGGCTTGGTGCTTACTGAAATCTCACTGCCAACCTGGAGGCCCTCAGGAAGGAGATGGTGTCACTaGCACCCCCTGTCACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLGLVLTEISLPTWRPSGRRWCH*HPLSPP Trigger: CGGAGGTGACAGGGGGTGTCAGTGACACCATCTCCT...TCCTGAGGGCCTCCAGGTTGGCAGTGAGATTTCAGTAAGCACCAAGCCTAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS-3UTR GCA 90 bp | AATCTCACTGCCAACCTGGAGGCCCTCAGGAGGGTGAGTCCTGACCCAAGGTGTGGACAGCCGACCGCTTaGCCAGCATCATATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: NLTANLEALRRVSPDPRCGQPTA*PASYSQ Trigger: TTGTGAATATGATGCTGGGCAAGCGGTCGGCTGTCC...ACACCTTGGGTCAGGACTCACCCTCCTGAGGGCCTCCAGGTTGGCAGTGAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCCCTCTCCAGTTTTTGGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCGTCTCGCTCTGGAGGTaGGCCAGCTGGCTTCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSPVFGLMLALLYKEGVSLWR*ASWLRA Trigger: AGCCCGAAGCCAGCTGGCCCACCTCCAGAGCGAGAC...GCCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGGAGAGGGCAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS-3UTR TCA 90 bp | GTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGAGGAAGACATCAGATCTTTaGAGGCTGCGAGCTTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSPFVQRGQSSREQRGLRKTSDL*RLRAFP Trigger: CGGAAAAGCTCGCAGCCTTCAAAGATCTGATGTCTT...CCTCAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148056.4 |
||
| CDS-3UTR GCA 90 bp | GCAGGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTTGCTGCCAGCTGGCTTCGGGCTaGTCTCGTTGGCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSRLRFPTRVRHLILCCQLASG*SRWLFL Trigger: AAGGAAAAGCCAACGAGAGCAGCCCGAAGCCAGCTG...GCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS-3UTR CCA 90 bp | GTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGAGGTCATCACTGTACTTCTaGTCACAGAGGAACTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPFVQRGQSSREQRGLRSSLYF*SQRNSR Trigger: TCGGGAGTTCCTCTGTGACCAGAAGTACAGTGATGA...CCTCAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGCCCTCTCCAGTTTTTGGTTTGATGTTAGCCCTTTTGTACAAAGAGGGGGCGATGTCTCGCTCTaGAGGTGGGCCAGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPALSSFWFDVSPFVQRGGDVSL*RWASWL Trigger: AAGCCAGCTGGCCCACCTCCAGAGCGAGACATCGCC...CCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGGAGAGGGCAGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS-3UTR TCA 90 bp | CCAGTTTTTGGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGTCTCCTGCCGGGCTTTaGGCAAACCGAACGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVFGLMLALLYKEGRAAGSPAGL*ANRTPS Trigger: GGAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGA...CCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
||
| CDS-3UTR GCA 90 bp | GGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGCAGATCTTTGAAGGCTaGGAGCTTTTCCGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLMLALLYKEGRAAGSRGQIFEG*ELFRQV Trigger: AACCTGCCGGAAAAGCTCGCAGCCTTCAAAGATCTG...CCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148056.4 |
||
| CDS-3UTR GCA 90 bp | CCAGTTTTTGGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGGGACAGCCGACCGCTTaGCCAGCATCATATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PVFGLMLALLYKEGRAAGGQPTA*PASYSQ Trigger: TTGTGAATATGATGCTGGGCAAGCGGTCGGCTGTCC...CCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
||
| CDS-3UTR CCA 90 bp | GGAGCTAACCATTCCATGCCCTGTTTGCTTCACTCTCTCTCTCTCTCACTGCTGTCATCACTGTACTTCTaGTCACAGAGGAACTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GANHSMPCLLHSLSLSLLSSLYF*SQRNSR Trigger: TCGGGAGTTCCTCTGTGACCAGAAGTACAGTGATGA...CAGCAGTGAGAGAGAGAGAGAGTGAAGCAAACAGGGCATGGAATGGTTAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CAA 72 bp | CTCCATCTAATCCCCAAGCTCCAGGACTTGAGGGATTaGAAAAGGGAGCTAGGAGTTGGACATAGCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLIPKLQDLRD*KRELGVGHSTH Trigger: ATGTGTGCTATGTCCAACTCCTAGCTCCCTTTTCAAATCCCTCAAGTCCTGGAGCTTGGGGATTAGATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CAA 72 bp | CCATGTTACCTCCATCTAATCCCCAAGCTCCAGGACTaGAGGGATTTGAAAAGGGAGCTAGGAGTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PCYLHLIPKLQD*RDLKRELGVGH Trigger: ATGTCCAACTCCTAGCTCCCTTTTCAAATCCCTCAAGTCCTGGAGCTTGGGGATTAGATGGAGGTAACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCCCTCTCCAGTTTTTGGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCTTTCTCTTTGAAGGCTaGGAGCTTTTCCGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSPVFGLMLALLYKEGFLFEG*ELFRQV Trigger: AACCTGCCGGAAAAGCTCGCAGCCTTCAAAGAGAAA...GCCCTCTTTGTACAAAAGGGCTAACATCAAACCAAAAACTGGAGAGGGCAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CAA 72 bp | GGGTCAAGGCTGAGGTTCCCCACTCGGGTAAGACATTaGATACTTTGCTGCATGAATTCTTGGAAATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRLRFPTRVRH*ILCCMNSWKWS Trigger: AGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGCCTTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CAA 72 bp | GCTGAGGTTCCCCACTCGGGTAAGACATTTGATACTTaGCTGCATGAATTCTTGGAAATGGTCTCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AEVPHSGKTFDT*LHEFLEMVSED Trigger: GTCTTCAGAGACCATTTCCAAGAATTCATGCAGCAAAGTATCAAATGTCTTACCCGAGTGGGGAACCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| 3UTR CAA 72 bp | TACAAACATCTTTTGAGTCACAGGGCAAAGCCATACTaGGCAATCCCCAAACTGCTGGTTACACCAGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YKHLLSHRAKPY*AIPKLLVTPVT Trigger: TGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTTGCCCTGTGACTCAAAAGATGTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
||
| CDS GCA 90 bp | TGGTCACAGAGGAACTCCCGATTGATCTCCTCGAGCCTCTTCTCCTaGCGGGCTTTGAGCAAACCGAACGCCTTCCCTCCTTGGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSQRNSRLISSSLFS*RALSKPNAFPPWNL Trigger: CAGGTTCCAAGGAGGGAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGAAGAGGCTCGAGGAGATCAATCGGGAGTTCCTCTGTGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS-3UTR CAA 90 bp | GTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGAGGAGGACAGCCGACCGCTaGCCCAGCATCATATTCACA | + |
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Preference number: 5 (lower is better) Translates to: VSPFVQRGQSSREQRGLRRTADR*PSIIFT Trigger: TGTGAATATGATGCTGGGCAAGCGGTCGGCTGTCCT...CCTCAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS-3UTR CAA 90 bp | GGTTTGATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGTTCTCCTGCCGGGCTTaGAGCAAACCGAACGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GLMLALLYKEGRAAGSRGFSCRA*SKPNAF Trigger: GAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGAA...CCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS-3UTR CAA 90 bp | GATGTTAGCCCTTTTGTACAAAGAGGGCAGAGCAGCAGGGAGCAGAGGGGCCTGTTCGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC | + |
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Preference number: 5 (lower is better) Translates to: DVSPFVQRGQSSREQRGLFGLLS*AFPSNI Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCGAA...CAGGCCCCTCTGCTCCCTGCTGCTCTGCCCTCTTTGTACAAAAGGGCTAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS CCA 90 bp | AAGGCTGCGAGCTTTTCCGGCAGGTTCTCTTCATCACTGTACTTCTaGTCACAGAGGAACTCCCGATTGATCTCCTCGAGCCTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KAASFSGRFSSSLYF*SQRNSRLISSSLFS Trigger: GGAGAAGAGGCTCGAGGAGATCAATCGGGAGTTCCTCTGTGACCAGAAGTACAGTGATGAAGAGAACCTGCCGGAAAAGCTCGCAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS-3UTR CAA 90 bp | TTCTGTGCTCTGCAGAGGTCAGTGGCACACTCCTTTATGGAGGTGGTGTGTAAGAGGACAGCCGACCGCTaGCCCAGCATCATATTCACA | + |
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Preference number: 5 (lower is better) Translates to: FCALQRSVAHSFMEVVCKRTADR*PSIIFT Trigger: TGTGAATATGATGCTGGGCAAGCGGTCGGCTGTCCT...CTTACACACCACCTCCATAAAGGAGTGTGCCACTGACCTCTGCAGAGCACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| CDS-3UTR CAA 90 bp | CCAAATTATGAGCCCAGCTGGAATCCCTGGGACTACATGGTACTCACCTCTTGCTTCGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC | + |
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Preference number: 5 (lower is better) Translates to: PNYEPSWNPWDYMVLTSCFGLLS*AFPSNI Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCGAA...GCAAGAGGTGAGTACCATGTAGTCCCAGGGATTCCAGCTGGGCTCATAATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| CDS-3UTR CAA 90 bp | AAAGCCATACTTGGCAATCCCCAAACTGCTGGTTACACCAGTTACATTTGGTCTTTCTCCTGCCGGGCTTaGAGCAAACCGAACGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KAILGNPQTAGYTSYIWSFSCRA*SKPNAF Trigger: GAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGAA...AGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTGCCAAGTATGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| CDS-3UTR CAA 90 bp | CAATCCCCAAACTGCTGGTTACACCAGTTACATTTGGTCTTTTTCAGAAATAAGTCCATGTATTTCTCTTaGAAGGCTGCGAGCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: QSPNCWLHQLHLVFFRNKSMYFS*KAASFS Trigger: GGAAAAGCTCGCAGCCTTCAAAGAGAAATACATGGA...CTTATTTCTGAAAAAGACCAAATGTAACTGGTGTAACCAGCAGTTTGGGGATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001920.13 |
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| CDS GCA 72 bp | AGGAACTCCCGATTGATCTCCTCGAGCCTCTTCTCCTaGCGGGCTTTGAGCAAACCGAACGCCTTCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RNSRLISSSLFS*RALSKPNAFPP Trigger: AGGAGGGAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGAAGAGGCTCGAGGAGATCAATCGGGAGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS CAA 72 bp | CGATTGATCTCCTCGAGCCTCTTCTCCTGCCGGGCTTaGAGCAAACCGAACGCCTTCCCTCCTTGGAACCTG | + |
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Preference number: 6 (lower is better) Translates to: RLISSSLFSCRA*SKPNAFPPWNL Trigger: CAGGTTCCAAGGAGGGAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGAAGAGGCTCGAGGAGATCAATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS CAA 90 bp | AGGAACTCCCGATTGATCTCCTCGAGCCTCTTCTCCTGCCGGGCTTaGAGCAAACCGAACGCCTTCCCTCCTTGGAACCTGTTGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: RNSRLISSSLFSCRA*SKPNAFPPWNLLLS Trigger: ACTCAGCAACAGGTTCCAAGGAGGGAAGGCGTTCGGTTTGCTCAAAGCCCGGCAGGAGAAGAGGCTCGAGGAGATCAATCGGGAGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS CCA 72 bp | AGCTTTTCCGGCAGGTTCTCTTCATCACTGTACTTCTaGTCACAGAGGAACTCCCGATTGATCTCCTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: SFSGRFSSSLYF*SQRNSRLISSS Trigger: GCTCGAGGAGATCAATCGGGAGTTCCTCTGTGACCAGAAGTACAGTGATGAAGAGAACCTGCCGGAAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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| CDS TCA 72 bp | TCATATTCACAAAGTCTCGGTAGGAGATGGTGTCACTaGCACCCCCTGTCACCTCCGAGATCATCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SYSQSLGRRWCH*HPLSPPRSSSS Trigger: TGAAGAAGATGATCTCGGAGGTGACAGGGGGTGTCAGTGACACCATCTCCTACCGAGACTTTGTGAATATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001920.13 ENSMUST00000148056.4 |
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