Pregenerated sensors for AICDA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040627Ensembl transcript IDs: ENSMUST00000043301.14, ENSMUST00000160685.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGAGAGTTGGGACTCGGGGGCAATTTCTGCCGCATTCTGTCTCTaGGCCCTTGCAGAGCTTCCACCGTGTTGGGCCAGAGAATCCGGA | + |
|
Preference number: 1 (lower is better) Translates to: KESWDSGAISAAFCL*ALAELPPCWARESG Trigger: TCCGGATTCTCTGGCCCAACACGGTGGAAGCTCTGCAAGGGCGCAGAGACAGAATGCGGCAGAAATTGCCCCCGAGTCCCAACTCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR TCA 90 bp | TTTACAATCCTCCTGCCTCAGCTTCCTGAATGCTGGAACTATAGGTaGATGCCACTTTCCCTATTTTGCCACCCTCTTACACAGTTAACA | + |
|
Preference number: 1 (lower is better) Translates to: FTILLPQLPECWNYR*MPLSLFCHPLTQLT Trigger: TGTTAACTGTGTAAGAGGGTGGCAAAATAGGGAAAGTGGCATTCACCTATAGTTCCAGCATTCAGGAAGCTGAGGCAGGAGGATTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 90 bp | ATTTCGTTGGGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTTaGATTTTTCCCTTGTTAAGTATGATTTACCAGAACCCAATTCTG | + |
|
Preference number: 1 (lower is better) Translates to: ISLGKASFPCHGLAS*IFPLLSMIYQNPIL Trigger: CAGAATTGGGTTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAACGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 90 bp | ATCTGCATTTTAAGATCCTTTATTGAAATCACCCAGAGGCGATCGTaGATTCTTCAAATCCCACCCCAAGCCCTTTCACATACAAATGTG | + |
|
Preference number: 1 (lower is better) Translates to: ICILRSFIEITQRRS*ILQIPPQALSHTNV Trigger: CACATTTGTATGTGAAAGGGCTTGGGGTGGGATTTGAAGAATGCACGATCGCCTCTGGGTGATTTCAATAAAGGATCTTAAAATGCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 90 bp | TCTATGTTGGTTTCCTACATTTCGTTGGGCAAAGCGTCATTTCCTTaGCACGGTCTTGCGTCTTGCATTTTTCCCTTGTTAAGTATGATT | + |
|
Preference number: 1 (lower is better) Translates to: SMLVSYISLGKASFP*HGLASCIFPLLSMI Trigger: AATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAACGAAATGTAGGAAACCAACATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR TCA 90 bp | TTACTGATGTTTAAGGGACGCGATCTGAAAATTGGGTTGAACCCTTaGACTCTTCTTCTTGATAAGACTGTGAGTAAACTAATGACATTA | + |
|
Preference number: 1 (lower is better) Translates to: LLMFKGRDLKIGLNP*TLLLDKTVSKLMTL Trigger: TAATGTCATTAGTTTACTCACAGTCTTATCAAGAAGAAGAGTTCAAGGGTTCAACCCAATTTTCAGATCGCGTCCCTTAAACATCAGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CAA 90 bp | CAGGCTCCTTTAAGTCTTGTTCCCAAGGTCGCAAGGAAAGGAGAGTaGGGACTCGGGGGCAATTTCTGCCGCATTCTGTCTCTGCGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QAPLSLVPKVARKGE*GLGGNFCRILSLRP Trigger: AGGGCGCAGAGACAGAATGCGGCAGAAATTGCCCCCGAGTCCCAACTCTCCTTTCCTTGCGACCTTGGGAACAAGACTTAAAGGAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR GCA 90 bp | GTTGGGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTTGCATTTTTCCCTTGCTCAGTTACATCATTaGTCTGGCGGTCCTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VGQSVISLPRSCVLHFSLAQLHH*SGGPVQ Trigger: CTGCACAGGACCGCCAGAGCAATGATGTAACTGAGC...AAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTTTTGAGAGAATGGCTTGTGATTGCTCAGACAGAGACTGTAGGACAGCCCGCTCAGTTACATCATTaGTCTGGCGGTCCTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: MLLREWLVIAQTETVGQPAQLHH*SGGPVQ Trigger: CTGCACAGGACCGCCAGAGCAATGATGTAACTGAGC...GGGCTGTCCTACAGTCTCTGTCTGAGCAATCACAAGCCATTCTCTCAAAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTCGCAAGGAAAGGAGAGTTGGGACTCGGGGGCAATTTCTGCCGCATTCTGTATATACTTTGGATCTaGGCGCTTTGCTCCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KVARKGELGLGGNFCRILYILWI*ALCSFL Trigger: GAGAAAGGAGCAAAGCGCCCAGATCCAAAGTATATA...CAGAATGCGGCAGAAATTGCCCCCGAGTCCCAACTCTCCTTTCCTTGCGACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR TCA 90 bp | GTTGGGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTTGCATTTTTCCCTTAAACACGACGGACAGTaGAAACATACAGCATGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: VGQSVISLPRSCVLHFSLKHDGQ*KHTACA Trigger: GGCACATGCTGTATGTTTTCACTGTCCGTCGTGTTT...AAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CCA 90 bp | CTATTTTGCCACCCTCTTACACAGTTAACAATTTGGGGGAGCAGCATCACACACCAAGGAAAGGAGAGTTaGGACTCGGGGGCAATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LFCHPLTQLTIWGSSITHQGKES*DSGAIS Trigger: AGAAATTGCCCCCGAGTCCCAACTCTCCTTTCCTTG...GTGTGTGATGCTGCTCCCCCAAATTGTTAACTGTGTAAGAGGGTGGCAAAATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCGATCGTGCATTCTTCAAATCCCACCCCAAGCCCTTTCACATACAAATGTAGAATGGCTTGTGATTaGTCAGACAGAGACTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: EAIVHSSNPTPSPFTYKCRMACD*SDRDCR Trigger: CCTACAGTCTCTGTCTGAGCAATCACAAGCCATTCT...ACATTTGTATGTGAAAGGGCTTGGGGTGGGATTTGAAGAATGCACGATCGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTGGGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTTGCATTTTTCCCTTCATACAGCATGTGCCTaGGTATTAATGCTTTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VGQSVISLPRSCVLHFSLHTACA*VLMLLR Trigger: TCTCAAAAGCATTAATACTCAGGCACATGCTGTATG...AAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CCA 90 bp | CGACGGACAGTGAAAACATACAGCATGTGCCTGAGTATTAATGCTTTTGAGAGATCACGACCCAAAGTCTaGAAGTTCTGCTGTTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RRTVKTYSMCLSINAFERSRPKV*KFCCSP Trigger: TGGGGAACAGCAGAACTTCCAGACTTTGGGTCGTGA...TCTCTCAAAAGCATTAATACTCAGGCACATGCTGTATGTTTTCACTGTCCGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTTTGGATCTGGGCGCTTTGCTCCTTTCTCTACAGCAAGGCACCAGTTAGTTTTTAAGATCCTTTATTaGAATCACCCAGAGGCGATC | + |
|
Preference number: 2 (lower is better) Translates to: YFGSGRFAPFSTARHQLVFKILY*NHPEAI Trigger: GATCGCCTCTGGGTGATTTCAATAAAGGATCTTAAA...AACTAACTGGTGCCTTGCTGTAGAGAAAGGAGCAAAGCGCCCAGATCCAAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCCCTTTCACATACAAATGTGAAAAACACGACGGACAGTGAAAACATACAGTCACGACCCAAAGTCTaGAAGTTCTGCTGTTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: QALSHTNVKNTTDSENIQSRPKV*KFCCSP Trigger: TGGGGAACAGCAGAACTTCCAGACTTTGGGTCGTGA...CTGTATGTTTTCACTGTCCGTCGTGTTTTTCACATTTGTATGTGAAAGGGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR CAA 90 bp | CATTTCGTTGGGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTaGCATTTTTCCCTTGTTAAGTATGATTTACCAGAACCCAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: HFVGQSVISLPRSCV*HFSLVKYDLPEPNS Trigger: AGAATTGGGTTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAACGAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CAA 90 bp | GTCTATGTTGGTTTCCTACATTTCGTTGGGCAAAGCGTCATTTCCTaGCCACGGTCTTGCGTCTTGCATTTTTCCCTTGTTAAGTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: VYVGFLHFVGQSVIS*PRSCVLHFSLVKYD Trigger: ATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAACGAAATGTAGGAAACCAACATAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCACCCCAAGCCCTTTCACATACAAATGTGAAAAACACGACGGACAGTGAACATACAGCATGTGCCTaGGTATTAATGCTTTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: IPPQALSHTNVKNTTDSEHTACA*VLMLLR Trigger: TCTCAAAAGCATTAATACTCAGGCACATGCTGTATG...TTCACTGTCCGTCGTGTTTTTCACATTTGTATGTGAAAGGGCTTGGGGTGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR CAA 90 bp | AAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTTGCATTTTTCCCTaGTTAAGTATGATTTACCAGAACCCAATTCTGGCTGTGTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KASFPCHGLASCIFP*LSMIYQNPILAVLF Trigger: AAACAACACAGCCAGAATTGGGTTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR GCA 90 bp | CGACGGACAGTGAAAACATACAGCATGTGCCTGAGTATTAATGCTTTTGAGAGAGTGGTCGTCTCCATATaGTTTTCCATGCTGTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RRTVKTYSMCLSINAFERVVVSI*FSMLLK Trigger: TTTCAACAGCATGGAAAAGCATATGGAGACGACCAC...TCTCTCAAAAGCATTAATACTCAGGCACATGCTGTATGTTTTCACTGTCCGTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCGTGTATACAGGATTTCTTGTGGGCCTTTTAATTGCATTATAATGGCGACTTTGCTTCTTGAGGCGTaGACTCATTTTCAGAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: GRVYRISCGPFNCIIMATLLLEA*THFQSD Trigger: ATCACTCTGAAAATGAGTTCACGCCTCAAGAAGCAA...AGTCGCCATTATAATGCAATTAAAAGGCCCACAAGAAATCCTGTATACACGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR GCA 90 bp | ATATTTTTCTCATTAGCAAAGATCGTTGTTAGGGAGACCAGACATAAAGAGGGACCACTTTCCCTATTTTaGCACCCTCTTACACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: IFFSLAKIVVRETRHKEGPLSLF*HPLTQL Trigger: TAACTGTGTAAGAGGGTGGCAAAATAGGGAAAGTGG...TCCCTCTTTATGTCTGGTCTCCCTAACAACGATCTTTGCTAATGAGAAAAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTTCCCTTGTTAAGTATGATTTACCAGAACCCAATTCTGGCTGTGTTGTTATGCTTTTGAGAGAATaGCTTGTGATTGCTCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: HFSLVKYDLPEPNSGCVVMLLRE*LVIAQT Trigger: TGTCTGAGCAATCACAAGCCATTCTCTCAAAAGCAT...AACAACACAGCCAGAATTGGGTTCTGGTAAATCATACTTAACAAGGGAAAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 72 bp | GGGGGCAATTTCTGCCGCATTCTGTCTCTGCGCCCTTaGAGAGCTTCCACCGTGTTGGGCCAGAGAATCCGG | + |
|
Preference number: 3 (lower is better) Translates to: GGNFCRILSLRP*RASTVLGQRIR Trigger: CCGGATTCTCTGGCCCAACACGGTGGAAGCTCTGCAAGGGCGCAGAGACAGAATGCGGCAGAAATTGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 72 bp | TGGGACTCGGGGGCAATTTCTGCCGCATTCTGTCTCTaGGCCCTTGCAGAGCTTCCACCGTGTTGGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WDSGAISAAFCL*ALAELPPCWAR Trigger: TCTGGCCCAACACGGTGGAAGCTCTGCAAGGGCGCAGAGACAGAATGCGGCAGAAATTGCCCCCGAGTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 72 bp | GCAAGGAAAGGAGAGTTGGGACTCGGGGGCAATTTCTaGCGCATTCTGTCTCTGCGCCCTTGCAGAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ARKGELGLGGNF*RILSLRPCRAS Trigger: GGAAGCTCTGCAAGGGCGCAGAGACAGAATGCGGCAGAAATTGCCCCCGAGTCCCAACTCTCCTTTCCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 72 bp | CTGGAAGTTCTGCTGTTCCCCAGTAGATGGCGATGTTaGACAGCAAGCTCAGTTACATCATTGCTCTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LEVLLFPSRWRC*TASSVTSLLWR Trigger: CCGCCAGAGCAATGATGTAACTGAGCTTGCTGTGCAACATCGCCATCTACTGGGGAACAGCAGAACTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCACCCCAAGCCCTTTCACATACAAATGTGAAAAACACGACGGACAGTGAAAGCTCAGTTACATCATaGCTCTGGCGGTCCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IPPQALSHTNVKNTTDSESSVTS*LWRSCA Trigger: TGCACAGGACCGCCAGAGCAATGATGTAACTGAGCT...TTCACTGTCCGTCGTGTTTTTCACATTTGTATGTGAAAGGGCTTGGGGTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR TCA 72 bp | CTCCTGCCTCAGCTTCCTGAATGCTGGAACTATAGGTaGATGCCACTTTCCCTATTTTGCCACCCTCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LLPQLPECWNYR*MPLSLFCHPLT Trigger: TGTAAGAGGGTGGCAAAATAGGGAAAGTGGCATTCACCTATAGTTCCAGCATTCAGGAAGCTGAGGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CCA 72 bp | ACCCAAAGTCTGGAAGTTCTGCTGTTCCCCAGTAGATaGCGATGTTGCACAGCAAGCTCAGTTACATCATTG | + |
|
Preference number: 3 (lower is better) Translates to: TQSLEVLLFPSR*RCCTASSVTSL Trigger: CAATGATGTAACTGAGCTTGCTGTGCAACATCGCCATCTACTGGGGAACAGCAGAACTTCCAGACTTTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR CCA 72 bp | GCGGTTCCTGGCTATGATAACTATATACTTTGGATCTaGGCGCTTTGCTCCTTTCTCTACAGCAAGGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: AVPGYDNYILWI*ALCSFLYSKAP Trigger: TGGTGCCTTGCTGTAGAGAAAGGAGCAAAGCGCCCAGATCCAAAGTATATAGTTATCATAGCCAGGAACCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CCA 72 bp | CAAACTGGGAGTCTATGTTGGTTTCCTACATTTCGTTaGGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: QTGSLCWFPTFR*AKRHFLATVLR Trigger: ACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAACGAAATGTAGGAAACCAACATAGACTCCCAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CAA 90 bp | CGACCCAAAGTCTGGAAGTTCTGCTGTTCCCCAGTAGATGGCGATGTTGCACAGCATGTAGTTGAAGGGTaGTTTTTCTATCCAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RPKVWKFCCSPVDGDVAQHVVEG*FFYPVS Trigger: AGAGACTGGATAGAAAAACAACCCTTCAACTACATG...CTGTGCAACATCGCCATCTACTGGGGAACAGCAGAACTTCCAGACTTTGGGTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR CCA 72 bp | CGAGTAGCGGTTCCTGGCTATGATAACTATATACTTTaGATCTGGGCGCTTTGCTCCTTTCTCTACAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RVAVPGYDNYIL*IWALCSFLYSK Trigger: CTTGCTGTAGAGAAAGGAGCAAAGCGCCCAGATCCAAAGTATATAGTTATCATAGCCAGGAACCGCTACTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 72 bp | TTACAGCTCAGACTGGCCTCAAATTTACAATCCTCCTaGCTCAGCTTCCTGAATGCTGGAACTATAGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LQLRLASNLQSS*LSFLNAGTIGE Trigger: TTCACCTATAGTTCCAGCATTCAGGAAGCTGAGGCAGGAGGATTGTAAATTTGAGGCCAGTCTGAGCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 72 bp | GTTTCCTACATTTCGTTGGGCAAAGCGTCATTTCCTTaGCACGGTCTTGCGTCTTGCATTTTTCCCTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VSYISLGKASFP*HGLASCIFPLL Trigger: TAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCCAACGAAATGTAGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR TCA 72 bp | TATGATTTACCAGAACCCAATTCTGGCTGTGTTGTTTaGAATAGGGTCTCACCTTACAGCTCAGACTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: YDLPEPNSGCVV*NRVSPYSSDWP Trigger: AGGCCAGTCTGAGCTGTAAGGTGAGACCCTATTTCAAACAACACAGCCAGAATTGGGTTCTGGTAAATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR GCA 72 bp | TTAAGATCCTTTATTGAAATCACCCAGAGGCGATCGTaGATTCTTCAAATCCCACCCCAAGCCCTTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LRSFIEITQRRS*ILQIPPQALSH Trigger: ATGTGAAAGGGCTTGGGGTGGGATTTGAAGAATGCACGATCGCCTCTGGGTGATTTCAATAAAGGATCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR GCA 72 bp | GGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTTaGATTTTTCCCTTGTTAAGTATGATTTACCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GKASFPCHGLAS*IFPLLSMIYQN Trigger: GTTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCACGGTCTTGCGTCTTGCATTTTTCCCTTGTTAAGTATGATTTACCAGAATACACAGTTAACAATTaGGGGGAGCAGCATCACACA | + |
|
Preference number: 3 (lower is better) Translates to: LPRSCVLHFSLVKYDLPEYTVNN*GEQHHT Trigger: TGTGTGATGCTGCTCCCCCAAATTGTTAACTGTGTA...TTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CAA 90 bp | ATATTTTTCTCATTAGCAAAGATCGTTGTTAGGGAGACCAGACATAAAGAGGGAGCCACTTTCCCTATTTaGCCACCCTCTTACACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: IFFSLAKIVVRETRHKEGATFPI*PPSYTV Trigger: AACTGTGTAAGAGGGTGGCAAAATAGGGAAAGTGGC...TCCCTCTTTATGTCTGGTCTCCCTAACAACGATCTTTGCTAATGAGAAAAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCCCTTTCACATACAAATGTGAAAAACACGACGGACAGTGAAAACATACAGCATGTAGTTGAAGGGTaGTTTTTCTATCCAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QALSHTNVKNTTDSENIQHVVEG*FFYPVS Trigger: AGAGACTGGATAGAAAAACAACCCTTCAACTACATG...CTGTATGTTTTCACTGTCCGTCGTGTTTTTCACATTTGTATGTGAAAGGGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATTTTTCTCATTAGCAAAGATCGTTGTTAGGGAGACCAGACATAAAGAGGGACCAATTCTGGCTGTGTaGTTTGAAATAGGGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IFFSLAKIVVRETRHKEGPILAV*FEIGSH Trigger: GTGAGACCCTATTTCAAACAACACAGCCAGAATTGG...TCCCTCTTTATGTCTGGTCTCCCTAACAACGATCTTTGCTAATGAGAAAAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR TCA 72 bp | CTTCGTAGTCCTCATCTGCATTTTAAGATCCTTTATTaGAATCACCCAGAGGCGATCGTGCATTCTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRSPHLHFKILY*NHPEAIVHSSN Trigger: ATTTGAAGAATGCACGATCGCCTCTGGGTGATTTCAATAAAGGATCTTAAAATGCAGATGAGGACTACGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR TCA 72 bp | TTTAAGGGACGCGATCTGAAAATTGGGTTGAACCCTTaGACTCTTCTTCTTGATAAGACTGTGAGTAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: FKGRDLKIGLNP*TLLLDKTVSKL Trigger: TAGTTTACTCACAGTCTTATCAAGAAGAAGAGTTCAAGGGTTCAACCCAATTTTCAGATCGCGTCCCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CAA 72 bp | CGGGGGCAATTTCTGCCGCATTCTGTCTCTGCGCCCTaGCAGAGCTTCCACCGTGTTGGGCCAGAGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGQFLPHSVSAP*QSFHRVGPENP Trigger: CGGATTCTCTGGCCCAACACGGTGGAAGCTCTGCAAGGGCGCAGAGACAGAATGCGGCAGAAATTGCCCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR GCA 90 bp | TTCACGACCCAAAGTCTGGAAGTTCTGCTGTTCCCCAGTAGATGGCGATGTTGCCCTCAGGCTCAGCCTTaGGGTCTTCACAGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTTQSLEVLLFPSRWRCCPQAQP*GLHRSR Trigger: TCTACTTCTGTGAAGACCGCAAGGCTGAGCCTGAGG...GCAACATCGCCATCTACTGGGGAACAGCAGAACTTCCAGACTTTGGGTCGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CAA 72 bp | TTAAGTCTTGTTCCCAAGGTCGCAAGGAAAGGAGAGTaGGGACTCGGGGGCAATTTCTGCCGCATTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVPKVARKGE*GLGGNFCRILS Trigger: AGACAGAATGCGGCAGAAATTGCCCCCGAGTCCCAACTCTCCTTTCCTTGCGACCTTGGGAACAAGACTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR GCA 90 bp | GGCTATGATAACTATATACTTTGGATCTGGGCGCTTTGCTCCTTTCTCTACAGCGGCAGCCAGACTTGTTaGGAAGGTGGCCGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYDNYILWIWALCSFLYSGSQTC*EGGRSP Trigger: TGGACTTCGGCCACCTTCGCAACAAGTCTGGCTGCC...GCTGTAGAGAAAGGAGCAAAGCGCCCAGATCCAAAGTATATAGTTATCATAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR GCA 90 bp | CATTTTTCCCTTGTTAAGTATGATTTACCAGAACCCAATTCTGGCTGTGTTGTTTGGACCCCAGCGCGGTaGAGTCTCCGCAGCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFSLVKYDLPEPNSGCVVWTPAR*SLRSPS Trigger: TGAGGGGCTGCGGAGACTGCACCGCGCTGGGGTCCA...AACAACACAGCCAGAATTGGGTTCTGGTAAATCATACTTAACAAGGGAAAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR TCA 90 bp | GAGGCGATCGTGCATTCTTCAAATCCCACCCCAAGCCCTTTCACATACAAATGTGCCCTTCCCAGGCTTTaGAAGTTCTTTCACGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAIVHSSNPTPSPFTYKCALPRL*KFFHDF Trigger: AAAATCGTGAAAGAACTTTCAAAGCCTGGGAAGGGC...ACATTTGTATGTGAAAGGGCTTGGGGTGGGATTTGAAGAATGCACGATCGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTTTCTCATTAGCAAAGATCGTTGTTAGGGAGACCAGACATAAAGAGGGAGACTTGTTGCGAAGGTaGCCGAAGTCCAGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IFFSLAKIVVRETRHKEGDLLRR*PKSSEQ Trigger: CTGCTCACTGGACTTCGGCCACCTTCGCAACAAGTC...TCCCTCTTTATGTCTGGTCTCCCTAACAACGATCTTTGCTAATGAGAAAAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR CCA 90 bp | CGACGGACAGTGAAAACATACAGCATGTGCCTGAGTATTAATGCTTTTGAGAGAAACAACAATTCCACGTaGCAGCCAGACTTGTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRTVKTYSMCLSINAFERNNNST*QPDLLR Trigger: TCGCAACAAGTCTGGCTGCCACGTGGAATTGTTGTT...TCTCTCAAAAGCATTAATACTCAGGCACATGCTGTATGTTTTCACTGTCCGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CAA 72 bp | GGGCAAAGCGTCATTTCCTTGCCACGGTCTTGCGTCTaGCATTTTTCCCTTGTTAAGTATGATTTACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQSVISLPRSCV*HFSLVKYDLPE Trigger: TTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAATGACGCTTTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CAA 72 bp | TTTCCTTGCCACGGTCTTGCGTCTTGCATTTTTCCCTaGTTAAGTATGATTTACCAGAACCCAATTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPCHGLASCIFP*LSMIYQNPILA Trigger: AGCCAGAATTGGGTTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR TCA 90 bp | ATATTTTTCTCATTAGCAAAGATCGTTGTTAGGGAGACCAGACATAAAGAGGGAGCCCTTCCCAGGCTTTaGAAGTTCTTTCACGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFFSLAKIVVRETRHKEGALPRL*KFFHDF Trigger: AAAATCGTGAAAGAACTTTCAAAGCCTGGGAAGGGC...TCCCTCTTTATGTCTGGTCTCCCTAACAACGATCTTTGCTAATGAGAAAAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| 3UTR CAA 72 bp | TTAAGTATGATTTACCAGAACCCAATTCTGGCTGTGTaGTTTGAAATAGGGTCTCACCTTACAGCTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSMIYQNPILAV*FEIGSHLTAQT Trigger: AGTCTGAGCTGTAAGGTGAGACCCTATTTCAAACAACACAGCCAGAATTGGGTTCTGGTAAATCATACTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS CCA 90 bp | AGCCAGACTTGTTGCGAAGGTGGCCGAAGTCCAGTGAGCAGGAGGTaGCACTATCTCTCCTCTTCACCACGTAGCAGAGGTAGGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQTCCEGGRSPVSRR*HYLSSSPRSRGRSH Trigger: ATGAGACCTACCTCTGCTACGTGGTGAAGAGGAGAGATAGTGCCACCTCCTGCTCACTGGACTTCGGCCACCTTCGCAACAAGTCTGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS GCA 90 bp | AGATGTAGCGTAGGAACAACAATTCCACGTGGCAGCCAGACTTGTTaGGAAGGTGGCCGAAGTCCAGTGAGCAGGAGGTGGCACTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCSVGTTIPRGSQTC*EGGRSPVSRRWHYL Trigger: GAGATAGTGCCACCTCCTGCTCACTGGACTTCGGCCACCTTCGCAACAAGTCTGGCTGCCACGTGGAATTGTTGTTCCTACGCTACATCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS GCA 90 bp | GAAATGCATCTCGCAAGTCATCGACTTCGTACAAGGGCAAAAGGATaGGCCGAAGTTGTCTGGTTAGCCGGACAGAATTTTCATGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EMHLASHRLRTRAKG*AEVVWLAGQNFHVA Trigger: GGCTACATGAAAATTCTGTCCGGCTAACCAGACAACTTCGGCGCATCCTTTTGCCCTTGTACGAAGTCGATGACTTGCGAGATGCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| CDS-3UTR CAA 90 bp | CGACGGACAGTGAAAACATACAGCATGTGCCTGAGTATTAATGCTTTTGAGAGAGTCTCATGCCGTCCCTaGGCCCAGCGGACATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRTVKTYSMCLSINAFERVSCRP*AQRTFL Trigger: CAAAAATGTCCGCTGGGCCAAGGGACGGCATGAGAC...TCTCTCAAAAGCATTAATACTCAGGCACATGCTGTATGTTTTCACTGTCCGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS TCA 90 bp | AGCAGAGGTAGGTCTCATGCCGTCCCTTGGCCCAGCGGACATTTTTaGAATGGTAAAGAAACTTCTTTTGCTTCATCAGAAGGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRGRSHAVPWPSGHF*NGKETSFASSEGCP Trigger: TGGACAGCCTTCTGATGAAGCAAAAGAAGTTTCTTTACCATTTCAAAAATGTCCGCTGGGCCAAGGGACGGCATGAGACCTACCTCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR CAA 90 bp | CTATCCAGTCTCTTCAGAGAAATTTCATCACGTGTGACATTCCAGGAGGTTGCTAGCCCTTCCCAGGCTTaGAAAGTTCTTTCACGATTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSLFREISSRVTFQEVASPSQA*KVLSRF Trigger: AAATCGTGAAAGAACTTTCAAAGCCTGGGAAGGGCT...AGCAACCTCCTGGAATGTCACACGTGATGAAATTTCTCTGAAGAGACTGGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCACGGTCTTGCGTCTTGCATTTTTCCCTTGTTAAGTATGATTTACCAGAAAGCCCTTCCCAGGCTTaGAAAGTTCTTTCACGATTT | + |
|
Preference number: 5 (lower is better) Translates to: LPRSCVLHFSLVKYDLPESPSQA*KVLSRF Trigger: AAATCGTGAAAGAACTTTCAAAGCCTGGGAAGGGCT...TTCTGGTAAATCATACTTAACAAGGGAAAAATGCAAGACGCAAGACCGTGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS-3UTR CAA 90 bp | CGACGGACAGTGAAAACATACAGCATGTGCCTGAGTATTAATGCTTTTGAGAGAGTAAAGAAACTTCTTTaGCTTCATCAGAAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRTVKTYSMCLSINAFERVKKLL*LHQKAV Trigger: GACAGCCTTCTGATGAAGCAAAAGAAGTTTCTTTAC...TCTCTCAAAAGCATTAATACTCAGGCACATGCTGTATGTTTTCACTGTCCGTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS GCA 72 bp | GTAGGAACAACAATTCCACGTGGCAGCCAGACTTGTTaGGAAGGTGGCCGAAGTCCAGTGAGCAGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VGTTIPRGSQTC*EGGRSPVSRRW Trigger: CCACCTCCTGCTCACTGGACTTCGGCCACCTTCGCAACAAGTCTGGCTGCCACGTGGAATTGTTGTTCCTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS CAA 72 bp | CGTAGGAACAACAATTCCACGTGGCAGCCAGACTTGTaGCGAAGGTGGCCGAAGTCCAGTGAGCAGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRNNNSTWQPDL*RRWPKSSEQEV Trigger: CACCTCCTGCTCACTGGACTTCGGCCACCTTCGCAACAAGTCTGGCTGCCACGTGGAATTGTTGTTCCTACG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS CCA 72 bp | AACAATTCCACGTGGCAGCCAGACTTGTTGCGAAGGTaGCCGAAGTCCAGTGAGCAGGAGGTGGCACTATCT | + |
|
Preference number: 6 (lower is better) Translates to: NNSTWQPDLLRR*PKSSEQEVALS Trigger: AGATAGTGCCACCTCCTGCTCACTGGACTTCGGCCACCTTCGCAACAAGTCTGGCTGCCACGTGGAATTGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043301.14 |
||
| CDS CCA 72 bp | CTTCGTACAAGGGCAAAAGGATGCGCCGAAGTTGTCTaGTTAGCCGGACAGAATTTTCATGTAGCCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRTRAKGCAEVV*LAGQNFHVALP Trigger: GGGAAGGGCTACATGAAAATTCTGTCCGGCTAACCAGACAACTTCGGCGCATCCTTTTGCCCTTGTACGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043301.14 ENSMUST00000160685.2 |
||