Pregenerated sensors for AHSA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020288Ensembl transcript IDs: ENSMUST00000020529.13, ENSMUST00000109539.8, ENSMUST00000128372.8, ENSMUST00000128559.2, ENSMUST00000147157.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTTCAGGATTTGAACTCTTCCTATCTGGGTTTTTGTAGGACCTaGGGGCACTTGCTTTGCTCCTGTCAGTACACACTCCCAAACAGT | + |
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Preference number: 1 (lower is better) Translates to: CLQDLNSSYLGFCRT*GHLLCSCQYTLPNS Trigger: ACTGTTTGGGAGTGTGTACTGACAGGAGCAAAGCAAGTGCCCTCAGGTCCTACAAAAACCCAGATAGGAAGAGTTCAAATCCTGAAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
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| 3UTR CCA 90 bp | TTAATTTACCATACAGATGTCTCATCCCTCCAATCCCGAAGTGTGTaGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGA | + |
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Preference number: 1 (lower is better) Translates to: LIYHTDVSSLQSRSV*LFGRHQGEPEKCNR Trigger: TCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACACTTCGGGATTGGAGGGATGAGACATCTGTATGGTAAATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR CCA 90 bp | AAGATCTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATaGAAGGCCCATCTTCATTTTCAGAAGATGGTTCACATATCCGGT | + |
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Preference number: 1 (lower is better) Translates to: KIFRLLKTALSKSIE*KAHLHFQKMVHISG Trigger: ACCGGATATGTGAACCATCTTCTGAAAATGAAGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR TCA 90 bp | AGCCTACCTACTTATCTCAGAGGAACACCCATGGAAGGTGAGATATaGCACCCGATTTCACTCAATGCAGCATCTAGAATATTTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: SLPTYLRGTPMEGEI*HPISLNAASRIFQT Trigger: TGTTTGAAATATTCTAGATGCTGCATTGAGTGAAATCGGGTGTCATATCTCACCTTCCATGGGTGTTCCTCTGAGATAAGTAGGTAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR TCA 90 bp | AGCAGTAAGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTaGGAAGTCCTCTTGCATCCAAAACAGTTAATTTACCATACAGAT | + |
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Preference number: 1 (lower is better) Translates to: SSKETEREPRGLSAI*EVLLHPKQLIYHTD Trigger: ATCTGTATGGTAAATTAACTGTTTTGGATGCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCTTACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR TCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTCCTCCCAGGACCCTaGAGCTGCTGTGTCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTVLPGP*SCCVPQ Trigger: CTGAGGGACACAGCAGCTTCAGGGTCCTGGGAGGAC...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR CAA 90 bp | CCCCCACTAGCACCTCAGACAATGAGACAAGAGACTCATCGATTATaGACCCAGGGACAGAGCAAGATCTTCCGTCTCCTGAAAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: PPLAPQTMRQETHRL*TQGQSKIFRLLKTA Trigger: AGCTGTTTTCAGGAGACGGAAGATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGAGGTGCTAGTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCTCAGAGGAACACCCATaGAAGGTGAGATATGACACC | + |
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Preference number: 2 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCSEEHP*KVRYDT Trigger: GGTGTCATATCTCACCTTCCATGGGTGTTCCTCTGA...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR CAA 90 bp | ACCATACAGATGTCTCATCCCTCCAATCCCGAAGTGTGTGGCTATTaGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TIQMSHPSNPEVCGY*EDIKESQRSVTECS Trigger: GCTGCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACACTTCGGGATTGGAGGGATGAGACATCTGTATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR TCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGGCCTTTCTGCTATTTaGGAAGTCCTCTTGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTGLSAI*EVLLHP Trigger: TGGATGCAAGAGGACTTCTCAAATAGCAGAAAGGCC...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTAAAGAGTACGTGCCCTCCCCTATaGTGTTTGTCAAGTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: HSMQRNSLTMAGLTTVKSTCPPL*CLSSLL Trigger: GAGCAAACTTGACAAACAGCATAGGGGAGGGCACGT...ACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTTCAGAGGAACACCCATaGAAGGTGAGATATGACACC | + |
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Preference number: 2 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFSEEHP*KVRYDT Trigger: GGTGTCATATCTCACCTTCCATGGGTGTTCCTCTGA...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGGTCACAAGGATATCTaGCAAAGGAAACCAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFGHKDI*QRKPSC Trigger: GCAGCTTGGTTTCCTTTGCCAGATATCCTTGTGACC...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTGGTCACAAGGATATCTaGCAAAGGAAACCAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LPSPENSSVKEYRMEGPSGHKDI*QRKPSC Trigger: GCAGCTTGGTTTCCTTTGCCAGATATCCTTGTGACC...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTAAAGAGTGGCCTTTCTGCTATTTaGGAAGTCCTCTTGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: HSMQRNSLTMAGLTTVKSGLSAI*EVLLHP Trigger: TGGATGCAAGAGGACTTCTCAAATAGCAGAAAGGCC...ACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCTTAATGCTGGCTGTAGCGTTACTCCACATTACCAGAGAAACCAAAATAGAGGACCTGAGGGCACTTaGTTTGCTCCTGTCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: RLNAGCSVTPHYQRNQNRGPEGT*FAPVST Trigger: TGTACTGACAGGAGCAAAGCAAGTGCCCTCAGGTCC...TCTATTTTGGTTTCTCTGGTAATGTGGAGTAACGCTACAGCCAGCATTAAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
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| 3UTR-3UTR CCA 90 bp | CGAAGTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGATCAGAGGAACACCCATaGAAGGTGAGATATGACACC | + |
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Preference number: 2 (lower is better) Translates to: RSVWLFGRHQGEPEKCNRSEEHP*KVRYDT Trigger: GGTGTCATATCTCACCTTCCATGGGTGTTCCTCTGA...TCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACACTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCCAATCCCGAAGTGTGTaGCTATTTGGAAGACATCAA | + |
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Preference number: 2 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCQSRSV*LFGRHQ Trigger: TTGATGTCTTCCAAATAGCCACACACTTCGGGATTG...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTTTTAATATGGCTTTCTaGGAGAAGCAGGGCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTFNMAF*EKQGSD Trigger: GTCAGAGCCCTGCTTCTCCCAGAAAGCCATATTAAA...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTTTTAATATGGCTTTCTaGGAGAAGCAGGGCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFFNMAF*EKQGSD Trigger: GTCAGAGCCCTGCTTCTCCCAGAAAGCCATATTAAA...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR TCA 90 bp | CGTCTTAATGCTGGCTGTAGCGTTACTCCACATTACCAGAGAAACCAAAATAGAAGACTCATCGATTATTaGCCCAGGGACAGAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RLNAGCSVTPHYQRNQNRRLIDY*PRDRAR Trigger: TCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCT...TCTATTTTGGTTTCTCTGGTAATGTGGAGTAACGCTACAGCCAGCATTAAGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTAAAGAGTAATCAACAATCCATGTaGTCACAAGGATATCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: HSMQRNSLTMAGLTTVKSNQQSM*SQGYLA Trigger: TGCCAGATATCCTTGTGACCACATGGATTGTTGATT...ACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCTTAATGCTGGCTGTAGCGTTACTCCACATTACCAGAGAAACCAAAATAGACAATCCCGAAGTGTGTaGCTATTTGGAAGACATCAA | + |
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Preference number: 2 (lower is better) Translates to: RLNAGCSVTPHYQRNQNRQSRSV*LFGRHQ Trigger: TTGATGTCTTCCAAATAGCCACACACTTCGGGATTG...TCTATTTTGGTTTCTCTGGTAATGTGGAGTAACGCTACAGCCAGCATTAAGACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATTCAAAGAGTATCGAATaGAAGGCCCATCTTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: SDNETRDSSIIDPGTEQDSKSIE*KAHLHF Trigger: AAAATGAAGATGGGCCTTCCATTCGATACTCTTTGA...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR CAA 90 bp | ACTGCTGTTCTGTGTACTTATAAACTGACTGTGATCACTTTTCCTTaGTTACATAAGTCGTTTGTTTCTTCAAATGACAGCAGTAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TAVLCTYKLTVITFP*LHKSFVSSNDSSKE Trigger: CTCCTTACTGCTGTCATTTGAAGAAACAAACGACTTATGTAACAAAGGAAAAGTGATCACAGTCAGTTTATAAGTACACAGAACAGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR TCA 72 bp | TTGCCTGGGATTTGGGCTGAGGGGTGGCTGGGAGGATaGAGACAAGCTTGGAGGTGTGGCATGTTGCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: LPGIWAEGWLGG*RQAWRCGMLLL Trigger: CAAGAGCAACATGCCACACCTCCAAGCTTGTCTTCATCCTCCCAGCCACCCCTCAGCCCAAATCCCAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
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| 3UTR CCA 72 bp | ACTAAGTCTTGCCTGGGATTTGGGCTGAGGGGTGGCTaGGAGGATGAAGACAAGCTTGGAGGTGTGGCATGT | + |
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Preference number: 3 (lower is better) Translates to: TKSCLGFGLRGG*EDEDKLGGVAC Trigger: ACATGCCACACCTCCAAGCTTGTCTTCATCCTCCCAGCCACCCCTCAGCCCAAATCCCAGGCAAGACTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
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| 3UTR GCA 72 bp | CTTCCTATCTGGGTTTTTGTAGGACCTGAGGGCACTTaGTTTGCTCCTGTCAGTACACACTCCCAAACAGTT | + |
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Preference number: 3 (lower is better) Translates to: LPIWVFVGPEGT*FAPVSTHSQTV Trigger: AACTGTTTGGGAGTGTGTACTGACAGGAGCAAAGCAAGTGCCCTCAGGTCCTACAAAAACCCAGATAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTGAAGTGTGTGGCTATTaGGAAGACATCAAGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LPSPENSSVKEYRMEGPSEVCGY*EDIKES Trigger: GCTCTCCTTGATGTCTTCCAAATAGCCACACACTTC...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CAA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTTGGCCTTTCTGCTATTaGAGAAGTCCTCTTGCATCC | + |
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Preference number: 3 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFWPFCY*RSPLAS Trigger: GGATGCAAGAGGACTTCTCAAATAGCAGAAAGGCCA...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTAATAAGAGAGGCAGATaGCCTCTGATCGCTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: LPSPENSSVKEYRMEGPSNKRGR*PLIAVV Trigger: AACCACAGCGATCAGAGGCAATCTGCCTCTCTTATT...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTCCCTGTGTAGGACCATaGAATCAACAATCCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: LPSPENSSVKEYRMEGPSPCVGP*NQQSMW Trigger: CCACATGGATTGTTGATTCAATGGTCCTACACAGGG...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTAAAGAGTGAAGTGTGTGGCTATTaGGAAGACATCAAGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: HSMQRNSLTMAGLTTVKSEVCGY*EDIKES Trigger: GCTCTCCTTGATGTCTTCCAAATAGCCACACACTTC...ACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR TCA 72 bp | CCTACCTACTTATCTCAGAGGAACACCCATGGAAGGTaGGATATGACACCCGATTTCACTCAATGCAGCATC | + |
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Preference number: 3 (lower is better) Translates to: PTYLSQRNTHGR*DMTPDFTQCSI Trigger: GATGCTGCATTGAGTGAAATCGGGTGTCATATCTCACCTTCCATGGGTGTTCCTCTGAGATAAGTAGGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR CCA 72 bp | GTATCGAATGGAAGGCCCATCTTCATTTTCAGAAGATaGTTCACATATCCGGTCACAGCATGCAGAGGAACA | + |
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Preference number: 3 (lower is better) Translates to: VSNGRPIFIFRR*FTYPVTACRGT Trigger: TGTTCCTCTGCATGCTGTGACCGGATATGTGAACCATCTTCTGAAAATGAAGATGGGCCTTCCATTCGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR CCA 72 bp | ATACCCTGTGTAGGACCATTGAATCAACAATCCATGTaGTCACAAGGATATCTGGCAAAGGAAACCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: IPCVGPLNQQSM*SQGYLAKETKL Trigger: CAGCTTGGTTTCCTTTGCCAGATATCCTTGTGACCACATGGATTGTTGATTCAATGGTCCTACACAGGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR CCA 72 bp | CGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATaGAAGGCCCATCTTCATTTTCAGAAGATGGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: RLLKTALSKSIE*KAHLHFQKMVH Trigger: GTGAACCATCTTCTGAAAATGAAGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR TCA 72 bp | ACTTATCTCAGAGGAACACCCATGGAAGGTGAGATATaGCACCCGATTTCACTCAATGCAGCATCTAGAATA | + |
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Preference number: 3 (lower is better) Translates to: TYLRGTPMEGEI*HPISLNAASRI Trigger: TATTCTAGATGCTGCATTGAGTGAAATCGGGTGTCATATCTCACCTTCCATGGGTGTTCCTCTGAGATAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| 3UTR TCA 72 bp | GAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTaGGAAGTCCTCTTGCATCCAAAACAGTTAATTTAC | + |
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Preference number: 3 (lower is better) Translates to: ETEREPRGLSAI*EVLLHPKQLIY Trigger: GTAAATTAACTGTTTTGGATGCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR TCA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTCTCCAAGGGCCTCCCTaGCCTTGGCGGTGCCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: LPSPENSSVKEYRMEGPSLQGPP*PWRCLS Trigger: CGACAGGCACCGCCAAGGTCAGGGAGGCCCTTGGAG...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR TCA 90 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTAAAGAGTCTCCAAGGGCCTCCCTaGCCTTGGCGGTGCCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: HSMQRNSLTMAGLTTVKSLQGPP*PWRCLS Trigger: CGACAGGCACCGCCAAGGTCAGGGAGGCCCTTGGAG...ACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR TCA 90 bp | CGAAGTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGACTCCAAGGGCCTCCCTaGCCTTGGCGGTGCCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: RSVWLFGRHQGEPEKCNRLQGPP*PWRCLS Trigger: CGACAGGCACCGCCAAGGTCAGGGAGGCCCTTGGAG...TCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACACTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CCA 90 bp | ATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAACTGGCTTCCCCTTGGACCAAATaGTGGCATCCCGCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MQPPSPHSNTLETPWKLASPWTK*WHPALS Trigger: GGACAGAGCGGGATGCCACCATTTGGTCCAAGGGGA...AGCCAGTTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020529.13 ENSMUST00000128372.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAAGCCAGTTGTTCACGTTaGTCCCGTCCTCCCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRMQPPSPHSNTLETPWKASCSR*SRPPAP Trigger: AGGAGCGGGAGGACGGGACCAACGTGAACAACTGGC...TTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCATTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020529.13 |
||
| CDS-3UTR CCA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCTCCCCTTGGACCAAATaGTGGCATCCCGCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCSPWTK*WHPALS Trigger: GGACAGAGCGGGATGCCACCATTTGGTCCAAGGGGA...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020529.13 ENSMUST00000128372.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAACCTTGGACCAAATGGTaGCATCCCGCTCTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NRMQPPSPHSNTLETPWKPWTKW*HPALSS Trigger: ACTGGACAGAGCGGGATGCCACCATTTGGTCCAAGG...TTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCATTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020529.13 |
||
| CDS-3UTR TCA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCTTTGCGGCTGTTACATaGAGCCTCACCTTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCFAAVT*SLTFHL Trigger: CAGGTGGAAGGTGAGGCTTCATGTAACAGCCGCAAA...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTCCTTGGACCAAATGGTaGCATCCCGCTCTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFPWTKW*HPALSF Trigger: GAAGGACAGAGCGGGATGCCACCATTTGGTCCAAGG...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTTTTGCGGCTGTTACATaGAGCCTCACCTTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTFAAVT*SLTFHL Trigger: CAGGTGGAAGGTGAGGCTTCATGTAACAGCCGCAAA...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAACTGGCTAACAGCTCTGTCAAGTaGAAAGCTACTGTGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MQPPSPHSNTLETPWKLANSSVK*KATVGI Trigger: GATTCCCACAGTAGCTTTGCACTTGACAGAGCTGTT...AGCCAGTTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCCACACCCAGTGCCACTaGAGAAGCCTGCAGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCGYLEDIKESQRSVTECHTQCH*RSLQLV Trigger: AACAAGCTGCAGGCTTCTCCAGTGGCACTGGGTGTG...GCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| 3UTR CAA 72 bp | GCACCTCAGACAATGAGACAAGAGACTCATCGATTATaGACCCAGGGACAGAGCAAGATCTTCCGTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: APQTMRQETHRL*TQGQSKIFRLL Trigger: CAGGAGACGGAAGATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGATTTGCGGCTGTTACATaGAGCCTCACCTTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSVWLFGRHQGEPEKCNRFAAVT*SLTFHL Trigger: CAGGTGGAAGGTGAGGCTTCATGTAACAGCCGCAAA...TCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACACTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCTGCCTGTCGTTCTCATaGGATCCTTCAGTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCCLSFS*DPSVFP Trigger: GGGAAATACTGAAGGATCTCATGAGAACGACAGGCA...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTCTTTCCAGGCCAGCTTaGTGTTCCACTCATAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTLSRPA*CSTHRR Trigger: TCTTCTATGAGTGGAACATCAAGCTGGCCTGGAAAG...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTTGCCTGTCGTTCTCATaGGATCCTTCAGTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTCLSFS*DPSVFP Trigger: GGGAAATACTGAAGGATCTCATGAGAACGACAGGCA...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCAAATTCCGTCTTGAGTaGCTTCAGGTACTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCKFRLE*LQVLSK Trigger: CTTGGAGAGTACCTGAAGGCACTCAAGACGGAATTT...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCAGACAGGAACTCCCTTaGAGTCCAATTGTAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCRQELP*SPIVIP Trigger: CGGAATTACAATTGGACTGCAAGGGAGTTCCTGTCT...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCAGTGCCTGTCGTTCTCATaGGATCCTTCAGTATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWLFGRHQGEPEKCNRMQCLSFS*DPSVFP Trigger: GGGAAATACTGAAGGATCTCATGAGAACGACAGGCA...CTGCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTTCATTCAGTTTCCTCTaGAGAGTCAGTTCCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTSFSFL*RVSSWV Trigger: AACCCAGGAACTGACTCTTCAGAGGAAACTGAATGA...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAACTGGCTAAGTCCCTTGTGTTTTaGACCAGATTCTTTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MQPPSPHSNTLETPWKLAKSLVF*TRFFNC Trigger: ACAGTTAAAGAATCTGGTGCAAAACACAAGGGACTT...AGCCAGTTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTAAATTCCGTCTTGAGTaGCTTCAGGTACTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSPENSSVKEYRMEGPSKFRLE*LQVLSK Trigger: CTTGGAGAGTACCTGAAGGCACTCAAGACGGAATTT...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCGCCACTGGAGAAGCCTaGAGCTTGTTTTCATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCGYLEDIKESQRSVTECATGEA*SLFSFS Trigger: ACTGAATGAAAACAAGCTGCAGGCTTCTCCAGTGGC...GCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCAGGCCACTGGAGAAGCCTaGAGCTTGTTTTCATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VWLFGRHQGEPEKCNRMQATGEA*SLFSFS Trigger: ACTGAATGAAAACAAGCTGCAGGCTTCTCCAGTGGC...CTGCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTAACAGCTCTGTCAAGTaGAAAGCTACTGTGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFNSSVK*KATVGI Trigger: GATTCCCACAGTAGCTTTGCACTTGACAGAGCTGTT...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATCTTTCCAGGCCAGCTTaGTGTTCCACTCATAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDNETRDSSIIDPGTEQDLSRPA*CSTHRR Trigger: TCTTCTATGAGTGGAACATCAAGCTGGCCTGGAAAG...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCTCATTCAGTTTCCTCTaGAGAGTCAGTTCCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCGYLEDIKESQRSVTECSFSFL*RVSSWV Trigger: AACCCAGGAACTGACTCTTCAGAGGAAACTGAATGA...GCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATGCCACTGGAGAAGCCTaGAGCTTGTTTTCATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDNETRDSSIIDPGTEQDATGEA*SLFSFS Trigger: ACTGAATGAAAACAAGCTGCAGGCTTCTCCAGTGGC...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAAATTCAGTTCAACTGTTaGATAGTGTTCTTCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRMQPPSPHSNTLETPWKIQFNC*IVFFWP Trigger: TGGCCAGAAGAACACTATGCAACAGTTGAACTGAAT...TTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCATTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTAATTGTAATTCCGTTTaGCCTGGAGCAGGCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTNCNSV*PGAGTK Trigger: TTTTGTGCCTGCTCCAGGGCAAACGGAATTACAATT...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCAGACAGGAACTCCCTTaGAGTCCAATTGTAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VCGYLEDIKESQRSVTECRQELP*SPIVIP Trigger: CGGAATTACAATTGGACTGCAAGGGAGTTCCTGTCT...GCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR TCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATTCATTCAGTTTCCTCTaGAGAGTCAGTTCCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SDNETRDSSIIDPGTEQDSFSFL*RVSSWV Trigger: AACCCAGGAACTGACTCTTCAGAGGAAACTGAATGA...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATAACAGCTCTGTCAAGTaGAAAGCTACTGTGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SDNETRDSSIIDPGTEQDNSSVK*KATVGI Trigger: GATTCCCACAGTAGCTTTGCACTTGACAGAGCTGTT...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTATTCAGTTCAACTGTTaGATAGTGTTCTTCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFIQFNC*IVFFWP Trigger: TGGCCAGAAGAACACTATGCAACAGTTGAACTGAAT...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | CGAAGTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAAATTGTAATTCCGTTTaGCCTGGAGCAGGCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSVWLFGRHQGEPEKCNRNCNSV*PGAGTK Trigger: TTTTGTGCCTGCTCCAGGGCAAACGGAATTACAATT...TCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACACTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATAGACAGGAACTCCCTTaGAGTCCAATTGTAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SDNETRDSSIIDPGTEQDRQELP*SPIVIP Trigger: CGGAATTACAATTGGACTGCAAGGGAGTTCCTGTCT...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| 3UTR CAA 72 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTaGACGACTGTAAAGAGTTTAAAGACCACTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSMQRNSLTMAG*TTVKSLKTTVP Trigger: TGGAACAGTGGTCTTTAAACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTAAGTCCCTTGTGTTTTaGACCAGATTCTTTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFKSLVF*TRFFNC Trigger: ACAGTTAAAGAATCTGGTGCAAAACACAAGGGACTT...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATAATTGTAATTCCGTTTaGCCTGGAGCAGGCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDNETRDSSIIDPGTEQDNCNSV*PGAGTK Trigger: TTTTGTGCCTGCTCCAGGGCAAACGGAATTACAATT...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTAAAGAGTAAGTCCCTTGTGTTTTaGACCAGATTCTTTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSMQRNSLTMAGLTTVKSKSLVF*TRFFNC Trigger: ACAGTTAAAGAATCTGGTGCAAAACACAAGGGACTT...ACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATATTCAGTTCAACTGTTaGATAGTGTTCTTCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDNETRDSSIIDPGTEQDIQFNC*IVFFWP Trigger: TGGCCAGAAGAACACTATGCAACAGTTGAACTGAAT...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| 3UTR CAA 72 bp | GCAGCACCCCTAACTAACAAGATGTTTATGAGCCACTaGAATCACTCAACTAGTGGAATACCACGTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AAPLTNKMFMSH*NHSTSGIPRLN Trigger: ATTAAGACGTGGTATTCCACTAGTTGAGTGATTCAAGTGGCTCATAAACATCTTGTTAGTTAGGGGTGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109539.8 |
||
| 3UTR CAA 72 bp | CTGTGTACTTATAAACTGACTGTGATCACTTTTCCTTaGTTACATAAGTCGTTTGTTTCTTCAAATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCTYKLTVITFP*LHKSFVSSNDS Trigger: GCTGTCATTTGAAGAAACAAACGACTTATGTAACAAAGGAAAAGTGATCACAGTCAGTTTATAAGTACACAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTAGGGCCTCCCTGACCTaGGCGGTGCCTGTCGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSPENSSVKEYRMEGPSRASLT*AVPVVL Trigger: GAGAACGACAGGCACCGCCAAGGTCAGGGAGGCCCT...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
||
| CDS-3UTR CAA 90 bp | TCAGACAATGAGACAAGAGACTCATCGATTATTGACCCAGGGACAGAGCAAGATAGGGCCTCCCTGACCTaGGCGGTGCCTGTCGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SDNETRDSSIIDPGTEQDRASLT*AVPVVL Trigger: GAGAACGACAGGCACCGCCAAGGTCAGGGAGGCCCT...ATCTTGCTCTGTCCCTGGGTCAATAATCGATGAGTCTCTTGTCTCATTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS GCA 90 bp | CAGCTCTGTCAAGTGCAAAGCTACTGTGGGAATCCTCACACCCAGTaGCACTGGAGAAGCCTGCAGCTTGTTTTCATTCAGTTTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: QLCQVQSYCGNPHTQ*HWRSLQLVFIQFPL Trigger: CAGAGGAAACTGAATGAAAACAAGCTGCAGGCTTCTCCAGTGGCACTGGGTGTGAGGATTCCCACAGTAGCTTTGCACTTGACAGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 ENSMUST00000147157.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAACTGGCTCAGACAGGAACTCCCTaGCAGTCCAATTGTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: MQPPSPHSNTLETPWKLAQTGTP*QSNCNS Trigger: GGAATTACAATTGGACTGCAAGGGAGTTCCTGTCTG...AGCCAGTTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | AACAGAATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAAGGAGAAGCCTGCAGCTaGTTTTCATTCAGTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: NRMQPPSPHSNTLETPWKGEACS*FSFSFL Trigger: GAGGAAACTGAATGAAAACAAGCTGCAGGCTTCTCC...TTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCATTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | ATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAACTGGCTTTGCTACAGCTTTTGTaGGTAAGATCATTCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: MQPPSPHSNTLETPWKLALLQLL*VRSFLL Trigger: CAACAGGAATGATCTTACCAACAAAAGCTGTAGCAA...AGCCAGTTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | AGGAGACTGAAAGGGAACCACGTGGCCTTTCTGCTATTTGAGAAGTCCTCTTGCGGGTTGCTACAGCTTTaGTTGGTAAGATCATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: RRLKGNHVAFLLFEKSSCGLLQL*LVRSFL Trigger: CAGGAATGATCTTACCAACAAAAGCTGTAGCAACCC...GCAAGAGGACTTCTCAAATAGCAGAAAGGCCACGTGGTTCCCTTTCAGTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGGAGAAGCCTGCAGCTaGTTTTCATTCAGTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFGEACS*FSFSFL Trigger: GAGGAAACTGAATGAAAACAAGCTGCAGGCTTCTCC...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | CTTCCGTCTCCTGAAAACAGCTCTGTCAAAGAGTATCGAATGGAAGGCCCATCTCAGACAGGAACTCCCTaGCAGTCCAATTGTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: LPSPENSSVKEYRMEGPSQTGTP*QSNCNS Trigger: GGAATTACAATTGGACTGCAAGGGAGTTCCTGTCTG...AGATGGGCCTTCCATTCGATACTCTTTGACAGAGCTGTTTTCAGGAGACGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | GGTTCACATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGGGTTGCTACAGCTTTaGTTGGTAAGATCATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GSHIRSQHAEEQSNNGRFGLLQL*LVRSFL Trigger: CAGGAATGATCTTACCAACAAAAGCTGTAGCAACCC...AAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATATGTGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCGGAGAAGCCTGCAGCTaGTTTTCATTCAGTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VCGYLEDIKESQRSVTECGEACS*FSFSFL Trigger: GAGGAAACTGAATGAAAACAAGCTGCAGGCTTCTCC...GCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | AACAGAATGCAGCCACCTAGCCCTCACAGCAACACTCTGGAAACACCTTGGAAAAATTCAGTTCAACTGTaGCATAGTGTTCTTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: NRMQPPSPHSNTLETPWKNSVQL*HSVLLA Trigger: GGCCAGAAGAACACTATGCAACAGTTGAACTGAATT...TTTCCAAGGTGTTTCCAGAGTGTTGCTGTGAGGGCTAGGTGGCTGCATTCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCCAGACAGGAACTCCCTaGCAGTCCAATTGTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: VCGYLEDIKESQRSVTECQTGTP*QSNCNS Trigger: GGAATTACAATTGGACTGCAAGGGAGTTCCTGTCTG...GCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | ATATCCGGTCACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTTTGCTACAGCTTTTGTaGGTAAGATCATTCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: ISGHSMQRNSLTMAGLTTLLQLL*VRSFLL Trigger: CAACAGGAATGATCTTACCAACAAAAGCTGTAGCAA...AGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | GTGTGGCTATTTGGAAGACATCAAGGAGAGCCAGAGAAGTGTAACAGAATGCAGAATTCAGTTCAACTGTaGCATAGTGTTCTTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VWLFGRHQGEPEKCNRMQNSVQL*HSVLLA Trigger: GGCCAGAAGAACACTATGCAACAGTTGAACTGAATT...CTGCATTCTGTTACACTTCTCTGGCTCTCCTTGATGTCTTCCAAATAGCCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS-3UTR CAA 90 bp | CACAGCATGCAGAGGAACAGTCTAACAATGGCAGGTTTGACGACTGTAAAGAGTTTGCTACAGCTTTTGTaGGTAAGATCATTCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: HSMQRNSLTMAGLTTVKSLLQLL*VRSFLL Trigger: CAACAGGAATGATCTTACCAACAAAAGCTGTAGCAA...ACTCTTTACAGTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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| CDS CAA 90 bp | AGCAAGGGACCCTGTGGTTCACAAGGGCTGCCGCCTTTACCCGTCTaGAGTGCCTTCAGGTACTCTCCAAGGGCCTCCCTGACCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SKGPCGSQGLPPLPV*SAFRYSPRASLTLA Trigger: CGCCAAGGTCAGGGAGGCCCTTGGAGAGTACCTGAAGGCACTCAAGACGGGTAAAGGCGGCAGCCCTTGTGAACCACAGGGTCCCTTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128559.2 |
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| CDS CCA 72 bp | CCAGGAGCTCTCGGAGCTTCCCCTTGGACCAAATGGTaGCATCCCGCTCTGTCCTTCCTACTGCACACGGAC | + |
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Preference number: 6 (lower is better) Translates to: PGALGASPWTKW*HPALSFLLHTD Trigger: GTCCGTGTGCAGTAGGAAGGACAGAGCGGGATGCCACCATTTGGTCCAAGGGGAAGCTCCGAGAGCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128372.8 |
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| CDS CAA 72 bp | CCCTGTGGTTCACAAGGGCTGCCGCCTTTACCCGTCTaGAGTGCCTTCAGGTACTCTCCAAGGGCCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PCGSQGLPPLPV*SAFRYSPRASL Trigger: CAGGGAGGCCCTTGGAGAGTACCTGAAGGCACTCAAGACGGGTAAAGGCGGCAGCCCTTGTGAACCACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128559.2 |
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| CDS CCA 72 bp | CCAGGAGCTCTCGGAGCTTCCCCTTGGACCAAATGGTaGCATCCCGCTCTGTCCAGTGCCAGTTGTTCACGT | + |
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Preference number: 6 (lower is better) Translates to: PGALGASPWTKW*HPALSSASCSR Trigger: ACGTGAACAACTGGCACTGGACAGAGCGGGATGCCACCATTTGGTCCAAGGGGAAGCTCCGAGAGCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000128559.2 ENSMUST00000147157.8 |
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| CDS GCA 72 bp | TGGTTCACAAGGGCTGCCGCCTTTACCCGTCTTGAGTaGCTTCAGGTACTCTCCAAGGGCCTCCCTGACCTT | + |
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Preference number: 6 (lower is better) Translates to: WFTRAAAFTRLE*LQVLSKGLPDL Trigger: AAGGTCAGGGAGGCCCTTGGAGAGTACCTGAAGGCACTCAAGACGGGTAAAGGCGGCAGCCCTTGTGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128559.2 |
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| CDS GCA 72 bp | CAAGTGCAAAGCTACTGTGGGAATCCTCACACCCAGTaGCACTGGAGAAGCCTGCAGCTTGTTTTCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: QVQSYCGNPHTQ*HWRSLQLVFIQ Trigger: CTGAATGAAAACAAGCTGCAGGCTTCTCCAGTGGCACTGGGTGTGAGGATTCCCACAGTAGCTTTGCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 ENSMUST00000147157.8 |
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| CDS TCA 72 bp | GAGATTTGGAGAATTTTTGCACCAATTCTTTTACAGTaGAGATACTGTACAGCTGTTCTACTGTCGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: EIWRIFAPILLQ*RYCTAVLLSCQ Trigger: TTGACACGACAGTAGAACAGCTGTACAGTATCTTCACTGTAAAAGAATTGGTGCAAAAATTCTCCAAATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020529.13 ENSMUST00000109539.8 ENSMUST00000128372.8 |
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