Pregenerated sensors for AHSA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021037Ensembl transcript IDs: ENSMUST00000021425.8, ENSMUST00000223352.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTaGACTAAAGTTTCAACAGGGCCAGAACCCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CNPVSHKPLREG*TKVSTGPEPLL Trigger: CAACAGGGGTTCTGGCCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGTCCAGTGCCAGTTGTTaGCGTTGGTGGCGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLAVGMVQSCESQAIARGSSASC*RWWRPP Trigger: GGGCGGACGCCACCAACGTCAACAACTGGCACTGGA...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACGCCCACTGGATCTACTaGCTCTCCATTCACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGMVQSCESQAIARGLDAHWIY*LSIHCG Trigger: CCCACAGTGAATGGAGAGTCAGTAGATCCAGTGGGC...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACGGCAAGATCATGCCCTaGGTAAACTCTGTCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGMVQSCESQAIARGLDGKIMP*VNSVLR Trigger: CCTCAAGACAGAGTTTACTCAGGGCATGATCTTGCC...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTACCGCTGCCAGCCTTaGCGCGTCCGCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGYRCQP*RVRSSS Trigger: TGAGGAAGAGCGGACGCGGCAAGGCTGGCAGCGGTA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACCCAACAGGTTTGGCCTaGCTTTTTGAAGGAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVGMVQSCESQAIARGLDPTGLA*LFEGAD Trigger: GTCTGCTCCTTCAAAAAGCCAGGCCAAACCTGTTGG...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGGCATGGGTAAAGGCCTaGACCAGCTCCTGCGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLAVGMVQSCESQAIARGAWVKA*TSSCVV Trigger: TACCACGCAGGAGCTGGTCCAGGCCTTTACCCATGC...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGCCTCAGGAGCAGGGATaGCACGGCCTTCCATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGPQEQG*HGLPCT Trigger: TGTGCATGGAAGGCCGTGGCATCCCTGCTCCTGAGG...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGCTCCACGATCCAGCGTaGGTCTCCCTCACCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGLHDPA*VSLTPL Trigger: AAGTGGGGTGAGGGAGACCCACGCTGGATCGTGGAG...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| 3UTR CAA 72 bp | CAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATaGCGAGAGGGCTGGACTAAAGTTTCAACAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QWGWCNPVSHKP*REGWTKVSTGP Trigger: TGGCCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGGTGATGGTGGCAAAGTaGCCCTCTGGCCATGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLAVGMVQSCESQAIARGVMVAK*PSGHDL Trigger: TAAGTCATGGCCAGAGGGGCACTTTGCCACCATCAC...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGTCTCTCTCTGTCCAGTaGCAGTTGTTGACGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLAVGMVQSCESQAIARGSLSVQ*QLLTLV Trigger: CACCAACGTCAACAACTGGCACTGGACAGAGAGAGA...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTGCCACGGCCTTCCATaGACAGCTCTGTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGCHGLP*TALSLH Trigger: ATGGAGAGACAGAGCTGTGCATGGAAGGCCGTGGCA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGTACAAGTGGGGATTTTaGCACCAACAGGTTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLAVGMVQSCESQAIARGYKWGF*HQQVWP Trigger: AGGCCAAACCTGTTGGTGTCAAAATCCCCACTTGTA...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR TCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTTGCCATCGACCATGTaGAACTTGCCACCTCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGLPSTM*NLPPLS Trigger: CGACAGAGGTGGCAAGTTTCACATGGTCGATGGCAA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCCTGTTGTTGATGGATaGCTCCCCATCAAGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLAVGMVQSCESQAIARGPVVDG*LPIKLV Trigger: AACAAGCTTGATGGGGAGGCATCCATCAACAACAGG...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGCGGTCACCTCGCACTTaGCCTCTTCATTTTCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGRSPRT*PLHFLL Trigger: GAGTAGAAAATGAAGAGGGCAAGTGCGAGGTGACCG...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTCTATAGAGCTCCTCTaGGGAGGTCAGGAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGSIELL*GGQEGF Trigger: GAAACCTTCCTGACCTCCCCAGAGGAGCTCTATAGA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGACATGTCCTTTGTACTaGACTCCTGACTTAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGTCPLY*TPDLEV Trigger: TACCTCTAAGTCAGGAGTGCAGTACAAAGGACATGT...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR GCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGGATGTAAATTCCCACTaGTTCTCTCAGAAGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGDVNSH*FSQKFH Trigger: GTGAAACTTCTGAGAGAAGCAGTGGGAATTTACATC...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CCA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTTTCATCAGACAAATTaGGGATTTCCACATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPVSHKPLREGWTKVSTGFHQTN*GFPHVL Trigger: AAGGACATGTGGAAATCCCCAATTTGTCTGATGAAA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS TCA 90 bp | GGGACCAGGTCAGTAAACTCCCCGGTGACGTTGCCATCGACCATGTaGAACTTGCCACCTCTGTCGGCTTCCAAGGCAGCGGGGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GTRSVNSPVTLPSTM*NLPPLSASKAAGAW Trigger: CCATGCCCCCGCTGCCTTGGAAGCCGACAGAGGTGGCAAGTTTCACATGGTCGATGGCAACGTCACCGGGGAGTTTACTGACCTGGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS GCA 90 bp | ACCGCTGCCAGCCTTGCCGCGTCCGCTCTTCCTCAGGAGCAGGGATaGCACGGCCTTCCATGCACAGCTCTGTCTCTCCATTCTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TAASLAASALPQEQG*HGLPCTALSLHSCQ Trigger: TTGACAAGAATGGAGAGACAGAGCTGTGCATGGAAGGCCGTGGCATCCCTGCTCCTGAGGAAGAGCGGACGCGGCAAGGCTGGCAGCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACGTCCAGTGCCAGTTGTaGACGTTGGTGGCGTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGMVQSCESQAIARGLDVQCQL*TLVASA Trigger: GGCGGACGCCACCAACGTCAACAACTGGCACTGGAC...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTCTGTCCAGTGCCAGTaGTTGACGTTGGTGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGMVQSCESQAIARGLDSVQCQ*LTLVAS Trigger: GGACGCCACCAACGTCAACAACTGGCACTGGACAGA...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGGTACCGCTGCCAGCCTaGCCGCGTCCGCTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NPVSHKPLREGWTKVSTGVPLPA*PRPLFL Trigger: GAGGAAGAGCGGACGCGGCAAGGCTGGCAGCGGTAC...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTGCCAGTTGTTGACGTaGGTGGCGTCCGCCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NPVSHKPLREGWTKVSTGCQLLT*VASARS Trigger: GGAGCGGGCGGACGCCACCAACGTCAACAACTGGCA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTCGGTCACCTCGCACTaGCCCTCTTCATTTTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: AVGMVQSCESQAIARGLDSVTSH*PSSFST Trigger: AGTAGAAAATGAAGAGGGCAAGTGCGAGGTGACCGA...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTTAAGGCCACGAGATTaGTGTCAGGCTCATCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVGMVQSCESQAIARGLDLRPRD*CQAHLW Trigger: CCAAAGATGAGCCTGACACAAATCTCGTGGCCTTAA...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACGGAGCAGACTTAGCCTaGCAAGTCTCAGTCTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVGMVQSCESQAIARGLDGADLA*QVSVFS Trigger: ACTAAAGACTGAGACTTGCAAGGCTAAGTCTGCTCC...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTTACAAGTGGGGATTTaGACACCAACAGGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGMVQSCESQAIARGLDLQVGI*TPTGLA Trigger: GGCCAAACCTGTTGGTGTCAAAATCCCCACTTGTAA...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CCA 90 bp | GGCCTGGACCAGCTCCTGCGTGGTAAACACTCTATAGAGCTCCTCTaGGGAGGTCAGGAAGGTTTCTTTAAGGGTGATCTTACAAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLDQLLRGKHSIELL*GGQEGFFKGDLTSG Trigger: CCCACTTGTAAGATCACCCTTAAAGAAACCTTCCTGACCTCCCCAGAGGAGCTCTATAGAGTGTTTACCACGCAGGAGCTGGTCCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTCTGTCTCTCCATTCTaGTCAATGAAGGTCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVGMVQSCESQAIARGLDSVSPF*SMKVKV Trigger: CACCTTGACCTTCATTGACAAGAATGGAGAGACAGA...GTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGGTGTCAGGCTCATCTTaGGCAAGGCTCACACTAATC | + |
|
Preference number: 5 (lower is better) Translates to: KLAVGMVQSCESQAIARGVSGSS*ARLTLI Trigger: GATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTTGCCTTTCCTGTTGTaGATGGATGCCTCCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NPVSHKPLREGWTKVSTGLPFLL*MDASPS Trigger: TGATGGGGAGGCATCCATCAACAACAGGAAAGGCAA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | AATCCTGTGAGTCACAAGCCATTGCGAGAGGGCTGGACTAAAGTTTCAACAGGGTCTCTGTGGACCAATTaGAAGCATCTCTCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NPVSHKPLREGWTKVSTGSLWTN*KHLSLS Trigger: GGACAGAGAGAGATGCTTCAAATTGGTCCACAGAGA...CCCTGTTGAAACTTTAGTCCAGCCCTCTCGCAATGGCTTGTGACTCACAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGATTTCCACATGTCCTTaGTACTGCACTCCTGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLAVGMVQSCESQAIARGISTCP*YCTPDL Trigger: TAAGTCAGGAGTGCAGTACAAAGGACATGTGGAAAT...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAGCAGTGGGGATGGTGCAATCCTGTGAGTCACAAGCCATTGCGAGAGGGTTTTCATCAGACAAATaGGGGATTTCCACATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLAVGMVQSCESQAIARGFSSDK*GISTCP Trigger: AGGACATGTGGAAATCCCCAATTTGTCTGATGAAAA...CCCTCTCGCAATGGCTTGTGACTCACAGGATTGCACCATCCCCACTGCTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS GCA 72 bp | AGCCTTGCCGCGTCCGCTCTTCCTCAGGAGCAGGGATaGCACGGCCTTCCATGCACAGCTCTGTCTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLAASALPQEQG*HGLPCTALSLH Trigger: ATGGAGAGACAGAGCTGTGCATGGAAGGCCGTGGCATCCCTGCTCCTGAGGAAGAGCGGACGCGGCAAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS TCA 72 bp | TCAGTAAACTCCCCGGTGACGTTGCCATCGACCATGTaGAACTTGCCACCTCTGTCGGCTTCCAAGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SVNSPVTLPSTM*NLPPLSASKAA Trigger: CGCTGCCTTGGAAGCCGACAGAGGTGGCAAGTTTCACATGGTCGATGGCAACGTCACCGGGGAGTTTACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS GCA 72 bp | CCCCATCAAGCTTGTTCACTTCGGTCACCTCGCACTTaGCCTCTTCATTTTCTACTCGAACGGCCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: PHQACSLRSPRT*PLHFLLERPGT Trigger: TGTTCCTGGCCGTTCGAGTAGAAAATGAAGAGGGCAAGTGCGAGGTGACCGAAGTGAACAAGCTTGATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CAA 72 bp | TCCCCATCAAGCTTGTTCACTTCGGTCACCTCGCACTaGCCCTCTTCATTTTCTACTCGAACGGCCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSLFTSVTSH*PSSFSTRTARN Trigger: GTTCCTGGCCGTTCGAGTAGAAAATGAAGAGGGCAAGTGCGAGGTGACCGAAGTGAACAAGCTTGATGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CAA 72 bp | CCTTTCCTGTTGTTGATGGATGCCTCCCCATCAAGCTaGTTCACTTCGGTCACCTCGCACTTGCCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PFLLLMDASPSS*FTSVTSHLPSS Trigger: TGAAGAGGGCAAGTGCGAGGTGACCGAAGTGAACAAGCTTGATGGGGAGGCATCCATCAACAACAGGAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CCA 72 bp | GACTTAGCCTTGCAAGTCTCAGTCTTTAGTGCTGGCTaGCCCACTGGATCTACTGACTCTCCATTCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DLALQVSVFSAG*PTGSTDSPFTV Trigger: CACAGTGAATGGAGAGTCAGTAGATCCAGTGGGCCAGCCAGCACTAAAGACTGAGACTTGCAAGGCTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021425.8 ENSMUST00000223352.2 |
||
| CDS CCA 72 bp | CAGCTCCTGCGTGGTAAACACTCTATAGAGCTCCTCTaGGGAGGTCAGGAAGGTTTCTTTAAGGGTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLLRGKHSIELL*GGQEGFFKGDL Trigger: AAGATCACCCTTAAAGAAACCTTCCTGACCTCCCCAGAGGAGCTCTATAGAGTGTTTACCACGCAGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CAA 72 bp | TTCATTAAGGCCACGAGATTTGTGTCAGGCTCATCTTaGGCAAGGCTCACACTAATCTCCACTTCATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: FIKATRFVSGSS*ARLTLISTSST Trigger: CGTGGATGAAGTGGAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACACAAATCTCGTGGCCTTAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS GCA 72 bp | TCAGACAAATTGGGGATTTCCACATGTCCTTTGTACTaGACTCCTGACTTAGAGGTACCTGTCCAGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SDKLGISTCPLY*TPDLEVPVQFS Trigger: ACTGAACTGGACAGGTACCTCTAAGTCAGGAGTGCAGTACAAAGGACATGTGGAAATCCCCAATTTGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CAA 90 bp | TCCACGCTATTTTCATCAGACAAATTGGGGATTTCCACATGTCCTTaGTACTGCACTCCTGACTTAGAGGTACCTGTCCAGTTCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: STLFSSDKLGISTCP*YCTPDLEVPVQFSL Trigger: CAAACTGAACTGGACAGGTACCTCTAAGTCAGGAGTGCAGTACAAAGGACATGTGGAAATCCCCAATTTGTCTGATGAAAATAGCGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CCA 72 bp | TCTCCACTTCATCCACGCTATTTTCATCAGACAAATTaGGGATTTCCACATGTCCTTTGTACTGCACTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPLHPRYFHQTN*GFPHVLCTALL Trigger: CAGGAGTGCAGTACAAAGGACATGTGGAAATCCCCAATTTGTCTGATGAAAATAGCGTGGATGAAGTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CAA 72 bp | TTTTCATCAGACAAATTGGGGATTTCCACATGTCCTTaGTACTGCACTCCTGACTTAGAGGTACCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSSDKLGISTCP*YCTPDLEVPVQ Trigger: CTGGACAGGTACCTCTAAGTCAGGAGTGCAGTACAAAGGACATGTGGAAATCCCCAATTTGTCTGATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CAA 90 bp | CTCACACTAATCTCCACTTCATCCACGCTATTTTCATCAGACAAATaGGGGATTTCCACATGTCCTTTGTACTGCACTCCTGACTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LTLISTSSTLFSSDK*GISTCPLYCTPDLE Trigger: CTCTAAGTCAGGAGTGCAGTACAAAGGACATGTGGAAATCCCCAATTTGTCTGATGAAAATAGCGTGGATGAAGTGGAGATTAGTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||
| CDS CAA 72 bp | ATCTCCACTTCATCCACGCTATTTTCATCAGACAAATaGGGGATTTCCACATGTCCTTTGTACTGCACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISTSSTLFSSDK*GISTCPLYCTP Trigger: AGGAGTGCAGTACAAAGGACATGTGGAAATCCCCAATTTGTCTGATGAAAATAGCGTGGATGAAGTGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021425.8 |
||