Pregenerated sensors for AHRR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021575Ensembl transcript IDs: ENSMUST00000022059.14, ENSMUST00000109640.8
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGTCCCATGGTGAGTCTTCTTGAGAGCCAAGCAGCTCAAACCTaGGCAGAAGACCTAGTCCTGCCCACCCAACTTGATTCTGATAAG | + |
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Preference number: 1 (lower is better) Translates to: PGPMVSLLESQAAQT*AEDLVLPTQLDSDK Trigger: CTTATCAGAATCAAGTTGGGTGGGCAGGACTAGGTCTTCTGCCCAGGTTTGAGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR TCA 90 bp | TGTGGGCTAAGGACAGAGAGAGCACAAGGTCCAGGGCTCTCACAGTaGGTATTCTCAGTTCTAGGAGATCTTCAGTTGTATCCTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: CGLRTERAQGPGLSQ*VFSVLGDLQLYPGP Trigger: GGGACCAGGATACAACTGAAGATCTCCTAGAACTGAGAATACTCACTGTGAGAGCCCTGGACCTTGTGCTCTCTCTGTCCTTAGCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR GCA 90 bp | GCAATGCCTCTTCATCAGTATGGCCTCATCCTTTTCTGTGTGTTGTaGTTCCCTGGTTCCTGGCCTCTACCATATGATGTACTCAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: AMPLHQYGLILFCVL*FPGSWPLPYDVLRD Trigger: GTCTCTGAGTACATCATATGGTAGAGGCCAGGAACCAGGGAAGCACAACACACAGAAAAGGATGAGGCCATACTGATGAAGAGGCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR TCA 90 bp | AGGCATCGCCAGACAGCTTCTTTCACTTGGCCAATGGTTGAGCAGTaGTACCCTGGAGCCATAGGTGAAGGAAAGAAAATCTATGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: RHRQTASFTWPMVEQ*YPGAIGEGKKIYAE Trigger: TTCAGCATAGATTTTCTTTCCTTCACCTATGGCTCCAGGGTATCACTGCTCAACCATTGGCCAAGTGAAAGAAGCTGTCTGGCGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CCA 90 bp | CAAGGTATGCTATGCTTGGCAGAAATGCATAAGCAATGTATAAACTaGTGTAGTTTGAGGAAAGGAGGGAGACAGGAGGCTAGGCACAGG | + |
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Preference number: 1 (lower is better) Translates to: QGMLCLAEMHKQCIN*CSLRKGGRQEARHR Trigger: CCTGTGCCTAGCCTCCTGTCTCCCTCCTTTCCTCAAACTACACCAGTTTATACATTGCTTATGCATTTCTGCCAAGCATAGCATACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CCA 90 bp | ACTAAGGACTTTCAGAGAGAAATACTAGATTGGAAGACACTTGAGTaGTATGAGCATGTCCTGCCCTTAGGAGCTAGGCATGTGTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: TKDFQREILDWKTLE*YEHVLPLGARHVFR Trigger: TCTAAACACATGCCTAGCTCCTAAGGGCAGGACATGCTCATACCACTCAAGTGTCTTCCAATCTAGTATTTCTCTCTGAAAGTCCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR TCA 90 bp | CTCAAAGTGAAATGCTGTCCACTTGAACAGATTGAGGTTTATGCATaGGAATCCTCTGATGTTCTATGTGATTCAGAATGCTCTACTGCT | + |
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Preference number: 1 (lower is better) Translates to: LKVKCCPLEQIEVYA*ESSDVLCDSECSTA Trigger: AGCAGTAGAGCATTCTGAATCACATAGAACATCAGAGGATTCTCATGCATAAACCTCAATCTGTTCAAGTGGACAGCATTTCACTTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| 3UTR GCA 90 bp | CATGTGTTTAGAACAGGAAGTGTTGTGGAAGACTCAAATTTTACCTaGTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: HVFRTGSVVEDSNFT*CYSLIPTRYAMLGR Trigger: TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATTTGAGTCTTCCACAACACTTCCTGTTCTAAACACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CAA 90 bp | CTGCAGGGAAGCCCAGGGCCCTGGAGAGCTGCCCACGCTCCACATTaGGTAAGTCATCCCAGCAGGGGTGCAGATGAGGTACATCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LQGSPGPWRAAHAPH*VSHPSRGADEVHLK Trigger: TTTCAGATGTACCTCATCTGCACCCCTGCTGGGATGACTTACCAAATGTGGAGCGTGGGCAGCTCTCCAGGGCCCTGGGCTTCCCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR GCA 90 bp | GGAAGCCCAGGGCCCTGGAGAGCTGCCCACGCTCCACATTTGGTAAGTCATCCCCCACAAGGTATGCTATaGTTGGCAGAAATGCATAAG | + |
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Preference number: 2 (lower is better) Translates to: GSPGPWRAAHAPHLVSHPPQGML*LAEMHK Trigger: CTTATGCATTTCTGCCAAGCATAGCATACCTTGTGG...GGGATGACTTACCAAATGTGGAGCGTGGGCAGCTCTCCAGGGCCCTGGGCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGACCTAGTCCTGCCCACCCAACTTGATTCTGATAAGGTGATAGGCATCGCCGTCCCTAAGTCTCCCTaGGCTAGAACGGTTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: EDLVLPTQLDSDKVIGIAVPKSP*ARTVAL Trigger: AAGAGCAACCGTTCTAGCCCAGGGAGACTTAGGGAC...GGCGATGCCTATCACCTTATCAGAATCAAGTTGGGTGGGCAGGACTAGGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTATCCTGGTCCCATGGTGAGTCTTCTTGAGAGCCAAGCAGCTCAAACCTGTGTTGTGCTTCCCTaGTTCCTGGCCTCTACCATA | + |
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Preference number: 2 (lower is better) Translates to: QLYPGPMVSLLESQAAQTCVVLP*FLASTI Trigger: TATGGTAGAGGCCAGGAACCAGGGAAGCACAACACA...GGTTTGAGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGGATACAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCCCAGGGCCCTGGAGAGCTGCCCACGCTCCACATTTGGTAAGTCATCCCAAGCAATGTATAAACTaGTGTAGTTTGAGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSPGPWRAAHAPHLVSHPKQCIN*CSLRKG Trigger: TCCTTTCCTCAAACTACACCAGTTTATACATTGCTT...GGGATGACTTACCAAATGTGGAGCGTGGGCAGCTCTCCAGGGCCCTGGGCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CAA 90 bp | AGGGCAATGCCTCTTCATCAGTATGGCCTCATCCTTTTCTGTGTGTaGTGCTTCCCTGGTTCCTGGCCTCTACCATATGATGTACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RAMPLHQYGLILFCV*CFPGSWPLPYDVLR Trigger: TCTGAGTACATCATATGGTAGAGGCCAGGAACCAGGGAAGCACAACACACAGAAAAGGATGAGGCCATACTGATGAAGAGGCATTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CAA 90 bp | CCCTTCCTTGGAACATTCTCAACTGCACCCCCAGCCATAGTCATTTaGCCAGCAGTTCCTGGTGACTCTTCCTTTCTGTTTTATACACGA | + |
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Preference number: 2 (lower is better) Translates to: PFLGTFSTAPPAIVI*PAVPGDSSFLFYTR Trigger: TCGTGTATAAAACAGAAAGGAAGAGTCACCAGGAACTGCTGGCAAAATGACTATGGCTGGGGGTGCAGTTGAGAATGTTCCAAGGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CAA 90 bp | CTATGCTTGGCAGAAATGCATAAGCAATGTATAAACTGGTGTAGTTaGAGGAAAGGAGGGAGACAGGAGGCTAGGCACAGGGGTAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LCLAEMHKQCINWCS*RKGGRQEARHRGKN Trigger: GTTCTTACCCCTGTGCCTAGCCTCCTGTCTCCCTCCTTTCCTCAAACTACACCAGTTTATACATTGCTTATGCATTTCTGCCAAGCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR TCA 90 bp | GACTTTCCCCCAGTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCCCATTATCCAAGGACTaGATTTCCAGCAGAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: DFPPVESANIRALCIYSSPLSKD*ISSRGA Trigger: TGCTCCTCTGCTGGAAATTCAGTCCTTGGATAATGG...GGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGACTGGGGGAAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CAA 90 bp | AGATTGCATTGTCTTTACAATTCAAAACAAATAGTGGCTGCCTTTTaGTCCCTAAGTCTCCCTGGGCTAGAACGGTTGCTCTTACCGGAA | + |
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Preference number: 2 (lower is better) Translates to: RLHCLYNSKQIVAAF*SLSLPGLERLLLPE Trigger: TTCCGGTAAGAGCAACCGTTCTAGCCCAGGGAGACTTAGGGACAAAAAGGCAGCCACTATTTGTTTTGAATTGTAAAGACAATGCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR TCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAACCATTATCCAAGGACTaGATTTCCAGCAGAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: YSATHQKYHGVSMTIIMQPLSKD*ISSRGA Trigger: TGCTCCTCTGCTGGAAATTCAGTCCTTGGATAATGG...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| 3UTR-3UTR GCA 90 bp | CACCACATGAGAAATGCATCTGGATTCTCTGTTAAAACAGAGCACCAAGAAAACTGGAACATTCTCAACTaGACCCCCAGCCATAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HHMRNASGFSVKTEHQENWNILN*TPSHSH Trigger: ATGACTATGGCTGGGGGTGCAGTTGAGAATGTTCCA...GTTTTCTTGGTGCTCTGTTTTAACAGAGAATCCAGATGCATTTCTCATGTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR TCA 90 bp | AATTTTACCTGCTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGAGCCAGCAGTTCCTGGTaGCTCTTCCTTTCTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: NFTCCYSLIPTRYAMLGRASSSW*LFLSVL Trigger: TAAAACAGAAAGGAAGAGTCACCAGGAACTGCTGGC...TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAGAGAAATACTAGATTGGAAGACACTTGAGTGGTATGAGCATGTCCTGTTTGAAAATCTTCTGTaGGCTAAGGACAGAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FQREILDWKTLEWYEHVLFENLL*AKDRES Trigger: GCTCTCTCTGTCCTTAGCCCACAGAAGATTTTCAAA...CAGGACATGCTCATACCACTCAAGTGTCTTCCAATCTAGTATTTCTCTCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR TCA 90 bp | CACCACATGAGAAATGCATCTGGATTCTCTGTTAAAACAGAGCACCAAGAAAACCAAGTTGGGGAGATTTaGTCTTCATTAGACAGCATT | + |
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Preference number: 2 (lower is better) Translates to: HHMRNASGFSVKTEHQENQVGEI*SSLDSI Trigger: AATGCTGTCTAATGAAGATCAAATCTCCCCAACTTG...GTTTTCTTGGTGCTCTGTTTTAACAGAGAATCCAGATGCATTTCTCATGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR GCA 72 bp | CCAAGTGCAGAACTCAAGTGTCCACAAAGCCTGACCTaGAGGGAAGCCCAGGGCCCTGGAGAGCTGCCCACG | + |
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Preference number: 3 (lower is better) Translates to: PSAELKCPQSLT*REAQGPGELPT Trigger: CGTGGGCAGCTCTCCAGGGCCCTGGGCTTCCCTGCAGGTCAGGCTTTGTGGACACTTGAGTTCTGCACTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR TCA 72 bp | TCTTCAGTTGTATCCTGGTCCCATGGTGAGTCTTCTTaGGAGCCAAGCAGCTCAAACCTGGGCAGAAGACCT | + |
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Preference number: 3 (lower is better) Translates to: SSVVSWSHGESS*EPSSSNLGRRP Trigger: AGGTCTTCTGCCCAGGTTTGAGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGGATACAACTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR TCA 72 bp | TGTGTTGTGCTTCCCTGGTTCCTGGCCTCTACCATATaGTGTACTCAGAGACACCGGCACATAAACCATACT | + |
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Preference number: 3 (lower is better) Translates to: CVVLPWFLASTI*CTQRHRHINHT Trigger: AGTATGGTTTATGTGCCGGTGTCTCTGAGTACATCATATGGTAGAGGCCAGGAACCAGGGAAGCACAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CCA 72 bp | GCAAGTTGGGGAGATTTGATCTTCATTAGACAGCATTaGCACCAGGTATCCAAGCTTGCCATAGGGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: ASWGDLIFIRQH*HQVSKLAIGCG Trigger: ACCACACCCTATGGCAAGCTTGGATACCTGGTGCCAATGCTGTCTAATGAAGATCAAATCTCCCCAACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR CAA 90 bp | GTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCCCAGCCCATCTCTGTGTCCCCTGCTCCTaGTGTAGGAAGTGTGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: VESANIRALCIYSSPAHLCVPCS*CRKCVA Trigger: TGCTACACACTTCCTACACAAGGAGCAGGGGACACA...GAGATGGGCTGGGGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR TCA 72 bp | CAGACAGCTTCTTTCACTTGGCCAATGGTTGAGCAGTaGTACCCTGGAGCCATAGGTGAAGGAAAGAAAATC | + |
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Preference number: 3 (lower is better) Translates to: QTASFTWPMVEQ*YPGAIGEGKKI Trigger: GATTTTCTTTCCTTCACCTATGGCTCCAGGGTATCACTGCTCAACCATTGGCCAAGTGAAAGAAGCTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGAGAGAAATACTAGATTGGAAGACACTTGAGTGGTATGAGCATGTCCTGCCAGCCATAGTCATTTaGCCAGCAGTTCCTGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: FQREILDWKTLEWYEHVLPAIVI*PAVPGD Trigger: GTCACCAGGAACTGCTGGCAAAATGACTATGGCTGG...CAGGACATGCTCATACCACTCAAGTGTCTTCCAATCTAGTATTTCTCTCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR GCA 72 bp | GCATGCCTTACATCTATGACAGCACAACTTCCATCTTaGCCTTTGAAAATCTTCTGTGGGCTAAGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: ACLTSMTAQLPS*PLKIFCGLRTE Trigger: CTCTGTCCTTAGCCCACAGAAGATTTTCAAAGGGCAAGATGGAAGTTGTGCTGTCATAGATGTAAGGCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CCA 72 bp | AGGAACAACCTCTCTTCGCTTCCTGTGCAAGCTGACTaGAGATTTGTGATGAATGAGCAAAAGTGCAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: RNNLSSLPVQAD*RFVMNEQKCKL Trigger: CAACTTGCACTTTTGCTCATTCATCACAAATCTCCAGTCAGCTTGCACAGGAAGCGAAGAGAGGTTGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CCA 72 bp | TTTCAGAGAGAAATACTAGATTGGAAGACACTTGAGTaGTATGAGCATGTCCTGCCCTTAGGAGCTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: FQREILDWKTLE*YEHVLPLGARH Trigger: ATGCCTAGCTCCTAAGGGCAGGACATGCTCATACCACTCAAGTGTCTTCCAATCTAGTATTTCTCTCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR-3UTR CAA 90 bp | GTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCCCAGCCCATCTCAGCACAACTTCCATCTaGCCCTTTGAAAATCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: VESANIRALCIYSSPAHLSTTSI*PFENLL Trigger: CAGAAGATTTTCAAAGGGCAAGATGGAAGTTGTGCT...GAGATGGGCTGGGGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR GCA 72 bp | ATTGCATTGTCTTTACAATTCAAAACAAATAGTGGCTaGCTTTTTGTCCCTAAGTCTCCCTGGGCTAGAACG | + |
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Preference number: 3 (lower is better) Translates to: IALSLQFKTNSG*LFVPKSPWART Trigger: CGTTCTAGCCCAGGGAGACTTAGGGACAAAAAGGCAGCCACTATTTGTTTTGAATTGTAAAGACAATGCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR GCA 72 bp | ATTTTGTTTGAGACAAGGTCTGATGTAGGCTTGAACTaGTCATCTTCTGTTTCAATCACTCAAGTGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ILFETRSDVGLN*SSSVSITQVLG Trigger: TCCCAGCACTTGAGTGATTGAAACAGAAGATGAGCAGTTCAAGCCTACATCAGACCTTGTCTCAAACAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CCA 72 bp | AACATAACTAAGGACTTTCAGAGAGAAATACTAGATTaGAAGACACTTGAGTGGTATGAGCATGTCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: NITKDFQREILD*KTLEWYEHVLP Trigger: GGGCAGGACATGCTCATACCACTCAAGTGTCTTCCAATCTAGTATTTCTCTCTGAAAGTCCTTAGTTATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CCA 72 bp | TGTTTCAATCACTCAAGTGCTGGGATTCATGCCACTTaGTCTAATACTGTCTCTGAATTCCATCTTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: CFNHSSAGIHAT*SNTVSEFHLHG Trigger: ACCATGAAGATGGAATTCAGAGACAGTATTAGACCAAGTGGCATGAATCCCAGCACTTGAGTGATTGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR TCA 72 bp | AAATGCTGTCCACTTGAACAGATTGAGGTTTATGCATaGGAATCCTCTGATGTTCTATGTGATTCAGAATGC | + |
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Preference number: 3 (lower is better) Translates to: KCCPLEQIEVYA*ESSDVLCDSEC Trigger: GCATTCTGAATCACATAGAACATCAGAGGATTCTCATGCATAAACCTCAATCTGTTCAAGTGGACAGCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| 3UTR TCA 72 bp | TACACAAGTTTTGCAAATGTAGTACAAACCACCACATaGGAAATGCATCTGGATTCTCTGTTAAAACAGAGC | + |
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Preference number: 3 (lower is better) Translates to: YTSFANVVQTTT*EMHLDSLLKQS Trigger: GCTCTGTTTTAACAGAGAATCCAGATGCATTTCTCATGTGGTGGTTTGTACTACATTTGCAAAACTTGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR GCA 72 bp | AGAACAGGAAGTGTTGTGGAAGACTCAAATTTTACCTaGTGTTATTCATTAATACCCACAAGGTATGCTATG | + |
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Preference number: 3 (lower is better) Translates to: RTGSVVEDSNFT*CYSLIPTRYAM Trigger: CATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATTTGAGTCTTCCACAACACTTCCTGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CCA 90 bp | GGAAGCCCAGGGCCCTGGAGAGCTGCCCACGCTCCACATTTGGTAAGTCATCCCGGGAGATATGGCAGGTaGAAGGATCCACCTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GSPGPWRAAHAPHLVSHPGRYGR*KDPPGP Trigger: AGGGCCAGGTGGATCCTTCCACCTGCCATATCTCCC...GGGATGACTTACCAAATGTGGAGCGTGGGCAGCTCTCCAGGGCCCTGGGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CCA 90 bp | GGAAGCCCAGGGCCCTGGAGAGCTGCCCACGCTCCACATTTGGTAAGTCATCCCCTCTGGCCATGTCGCTaGTTCCCAGCCACAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: GSPGPWRAAHAPHLVSHPLWPCR*FPATNS Trigger: GCTGTTTGTGGCTGGGAACCAGCGACATGGCCAGAG...GGGATGACTTACCAAATGTGGAGCGTGGGCAGCTCTCCAGGGCCCTGGGCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| 3UTR CAA 72 bp | AGCCCAGGGCCCTGGAGAGCTGCCCACGCTCCACATTaGGTAAGTCATCCCAGCAGGGGTGCAGATGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SPGPWRAAHAPH*VSHPSRGADEV Trigger: TACCTCATCTGCACCCCTGCTGGGATGACTTACCAAATGTGGAGCGTGGGCAGCTCTCCAGGGCCCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR TCA 90 bp | GGAAGCCCAGGGCCCTGGAGAGCTGCCCACGCTCCACATTTGGTAAGTCATCCCTTGGTAGTGCTCTCCTaGCTTCGCTGTTCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GSPGPWRAAHAPHLVSHPLVVLS*LRCSVL Trigger: GAGCACAGAACAGCGAAGTCAGGAGAGCACTACCAA...GGGATGACTTACCAAATGTGGAGCGTGGGCAGCTCTCCAGGGCCCTGGGCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR TCA 90 bp | GATCTTCAGTTGTATCCTGGTCCCATGGTGAGTCTTCTTGAGAGCCAAGCAGCTCTCCTTCTTGGGCCCTaGGCAGCTTCCCCAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: DLQLYPGPMVSLLESQAALLLGP*AASPGQ Trigger: CTGTCCTGGGGAAGCTGCTCAGGGCCCAAGAAGGAG...AGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGGATACAACTGAAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR GCA 90 bp | GAAGACCTAGTCCTGCCCACCCAACTTGATTCTGATAAGGTGATAGGCATCGCCTTGTGCATCTCCCTCTaGCCCCAGGCACCAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: EDLVLPTQLDSDKVIGIALCISL*PQAPGD Trigger: ATCCCCTGGTGCCTGGGGGCAGAGGGAGATGCACAA...GGCGATGCCTATCACCTTATCAGAATCAAGTTGGGTGGGCAGGACTAGGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR TCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGATGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRCPNTT*GGSMAQ Trigger: CTGGGCCATGGACCCTCCTCAGGTGGTGTTTGGGCA...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGACTCCTTCTTGGGCCCTaGGCAGCTTCCCCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRLLLGP*AASPGQ Trigger: CTGTCCTGGGGAAGCTGCTCAGGGCCCAAGAAGGAG...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACCTAGTCCTGCCCACCCAACTTGATTCTGATAAGGTGATAGGCATCGCCCTGGGTTGCATGGAGTaGCTATGGTCACTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDLVLPTQLDSDKVIGIALGCME*LWSLAG Trigger: GCCTGCCAGTGACCATAGGCACTCCATGCAACCCAG...GGCGATGCCTATCACCTTATCAGAATCAAGTTGGGTGGGCAGGACTAGGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCTCTGGCCATGTCGCTaGTTCCCAGCCACAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGYTQGISASPTEFCKEGLWPCR*FPATNS Trigger: GCTGTTTGTGGCTGGGAACCAGCGACATGGCCAGAG...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCCTTTCCAGCCATTCTTGCCATTCCTAAGACCTCAGGGGAAGTAGCACACAATGCAGAACAATaGGAGTCGAGGAGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKAFPAILAIPKTSGEVAHNAEQ*ESRRQG Trigger: GCCCTGCCTCCTCGACTCTCATTGTTCTGCATTGTG...TGCTACTTCCCCTGAGGTCTTAGGAATGGCAAGAATGGCTGGAAAGGCCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATCCTGAGGAGGGTCCATaGCCCAGTGTAGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQGISASPTEFCKEGHYPEEGP*PSVAVC Trigger: GCAGACAGCTACACTGGGCCATGGACCCTCCTCAGG...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TATGTGATTCAGAATGCTCTACTGCTAGGCTACACACAGGGAATCTCAGCCTCACCCCTGAAGTCCCCTTaGGGTCCAGCAGGTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YVIQNALLLGYTQGISASPLKSP*GPAGQD Trigger: GTCCTGACCTGCTGGACCCCAAGGGGACTTCAGGGG...TGAGGCTGAGATTCCCTGTGTGTAGCCTAGCAGTAGAGCATTCTGAATCACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCTAGTCCTGCCCACCCAACTTGATTCTGATAAGGTGATAGGCATCGCCTGCATGGAGTGCCTATaGTCACTGGCAGGCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EDLVLPTQLDSDKVIGIACMECL*SLAGWV Trigger: TACCCAGCCTGCCAGTGACCATAGGCACTCCATGCA...GGCGATGCCTATCACCTTATCAGAATCAAGTTGGGTGGGCAGGACTAGGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTGTGATGAGGAGGCTCTaGATCCAGGCAGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LGYTQGISASPTEFCKEGVMRRL*IQAGAM Trigger: CATTGCACCTGCCTGGATCCAGAGCCTCCTCATCAC...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTATCCTGGTCCCATGGTGAGTCTTCTTGAGAGCCAAGCAGCTCAAACCGTAAGCCTCCGCTTCTaGATGGGCTTCCTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLYPGPMVSLLESQAAQTVSLRF*MGFLLF Trigger: GAAGAGAAGGAAGCCCATTCAGAAGCGGAGGCTTAC...GGTTTGAGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGGATACAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR TCA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTTTGGTAGTGCTCTCCTaGCTTCGCTGTTCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGYTQGISASPTEFCKEGLVVLS*LRCSVL Trigger: GAGCACAGAACAGCGAAGTCAGGAGAGCACTACCAA...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATGTGGAAGGATCCACCTaGCCCTGGTGGATATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: YTQGISASPTEFCKEGHYVEGST*PWWISD Trigger: GTCGGATATCCACCAGGGCCAGGTGGATCCTTCCAC...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGTGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMCPNTT*GGSMAQ Trigger: CTGGGCCATGGACCCTCCTCAGGTGGTGTTTGGGCA...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCGCAGTCTTGGTCCAATaGGGGGTGCTGGCTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GISASPTEFCKEGHYKNLAVLVQ*GVLALT Trigger: AGTGAGAGCCAGCACCCCTCATTGGACCAAGACTGC...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCCTGGGTTGCATGGAGTaGCTATGGTCACTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GISASPTEFCKEGHYKNLLGCME*LWSLAG Trigger: GCCTGCCAGTGACCATAGGCACTCCATGCAACCCAG...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGGCCTTTCCAGCCATTCTTGCCATTCCTAAGACCTCAGGGGAAGTAGCACAGGCAGGTGCAATGTaGAGAGTAAAGAGGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HKAFPAILAIPKTSGEVAQAGAM*RVKRSM Trigger: CATGCTCCTCTTTACTCTGCACATTGCACCTGCCTG...TGCTACTTCCCCTGAGGTCTTAGGAATGGCAAGAATGGCTGGAAAGGCCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR GCA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCTGGATCCAGGCAGGTaGAATGTGCAGAGTAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGYTQGISASPTEFCKEGLDPGR*NVQSKE Trigger: CTCTTTACTCTGCACATTGCACCTGCCTGGATCCAG...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGATGGTCCAATGAGGGGTaGTGGCTCTCACTGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRWSNEG*WLSLWL Trigger: TAGCCACAGTGAGAGCCAGCACCCCTCATTGGACCA...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATTGGTCCAATGAGGGGTaGTGGCTCTCACTGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YTQGISASPTEFCKEGHYWSNEG*WLSLWL Trigger: TAGCCACAGTGAGAGCCAGCACCCCTCATTGGACCA...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCCTTTCCAGCCATTCTTGCCATTCCTAAGACCTCAGGGGAAGTAGCATTCCTTGGAACTGCATaGTCAGAAAGCCAGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKAFPAILAIPKTSGEVAFLGTA*SESQRC Trigger: GCACCTCTGGCTTTCTGACCATGCAGTTCCAAGGAA...TGCTACTTCCCCTGAGGTCTTAGGAATGGCAAGAATGGCTGGAAAGGCCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | CTACCTAGCAGAATTAGCCACAAGGCCTTTCCAGCCATTCTTGCCATTCCTAAGGATCCCAGACTGCCCTaGGAGATATGGCAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSRISHKAFPAILAIPKDPRLP*EIWQVE Trigger: TTCCACCTGCCATATCTCCCAGGGCAGTCTGGGATC...CTTAGGAATGGCAAGAATGGCTGGAAAGGCCTTGTGGCTAATTCTGCTAGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAGATCCCAGACTGCCCTaGGAGATATGGCAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRDPRLP*EIWQVE Trigger: TTCCACCTGCCATATCTCCCAGGGCAGTCTGGGATC...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TATGTGATTCAGAATGCTCTACTGCTAGGCTACACACAGGGAATCTCAGCCTCAGGAGCTCTGCAGTCTTaGTCCAATGAGGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVIQNALLLGYTQGISASGALQS*SNEGCW Trigger: CCAGCACCCCTCATTGGACCAAGACTGCAGAGCTCC...TGAGGCTGAGATTCCCTGTGTGTAGCCTAGCAGTAGAGCATTCTGAATCACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCTGGGCACAGTCACCTaGCCAGGAGCAGCCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMLGTVT*PGAAHD Trigger: ATCATGGGCTGCTCCTGGTCAGGTGACTGTGCCCAG...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCCCAGTGTAGCTGTCTaGAGAAGTCCTGCCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGISASPTEFCKEGHYKNPSVAV*RSPAGH Trigger: ATGACCGGCAGGACTTCTGCAGACAGCTACACTGGG...ATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGTTGTGCATCTCCCTCTaGCCCCAGGCACCAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMLCISL*PQAPGD Trigger: ATCCCCTGGTGCCTGGGGGCAGAGGGAGATGCACAA...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAGCCTCCGCTTCTGAATaGGCTTCCTTCTCTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRASASE*ASFSSY Trigger: GTAGGAAGAGAAGGAAGCCCATTCAGAAGCGGAGGC...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAACCCCTGAAGTCCCCTTaGGGTCCAGCAGGTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YSATHQKYHGVSMTIIMQPLKSP*GPAGQD Trigger: GTCCTGACCTGCTGGACCCCAAGGGGACTTCAGGGG...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCTTAGTATGTGCTTCTaGTCCTCCTCTTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGYTQGISASPTEFCKEGLSMCF*SSSSLS Trigger: GGACAGAGAAGAGGAGGACCAGAAGCACATACTAAG...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTATCCTGGTCCCATGGTGAGTCTTCTTGAGAGCCAAGCAGCTCAAACCTGTCCAGCTTGGAGATaGTATCAGGTGAAAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLYPGPMVSLLESQAAQTCPAWR*YQVKMA Trigger: TGCCATTTTCACCTGATATCATCTCCAAGCTGGACA...GGTTTGAGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGGATACAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR TCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAACTGGGCACAGTCACCTaGCCAGGAGCAGCCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSATHQKYHGVSMTIIMQLGTVT*PGAAHD Trigger: ATCATGGGCTGCTCCTGGTCAGGTGACTGTGCCCAG...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAGGTCCCGGTGCCGTTTaGAAGGATTTGATTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRGPGAV*KDLISQ Trigger: CTGAGAAATCAAATCCTTCCAAACGGCACCGGGACC...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | CAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATATGGCTCATTCTTACTaGGCTGCCGAGTCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGISASPTEFCKEGHYKNMAHSY*AAESAW Trigger: CCAAGCTGACTCGGCAGCCCAGTAAGAATGAGCCAT...ATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCTAGTCCTGCCCACCCAACTTGATTCTGATAAGGTGATAGGCATCGCCGCTTCAACTATATCCTaGGACCCAGATTCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDLVLPTQLDSDKVIGIAASTIS*DPDSFS Trigger: GGAGAATGAATCTGGGTCCCAGGATATAGTTGAAGC...GGCGATGCCTATCACCTTATCAGAATCAAGTTGGGTGGGCAGGACTAGGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| 3UTR CAA 72 bp | GGAACATTCTCAACTGCACCCCCAGCCATAGTCATTTaGCCAGCAGTTCCTGGTGACTCTTCCTTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTFSTAPPAIVI*PAVPGDSSFLF Trigger: AAACAGAAAGGAAGAGTCACCAGGAACTGCTGGCAAAATGACTATGGCTGGGGGTGCAGTTGAGAATGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR TCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCACAATGCAGAACAATaGGAGTCGAGGAGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMHNAEQ*ESRRQG Trigger: GCCCTGCCTCCTCGACTCTCATTGTTCTGCATTGTG...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTATTCATTCTCCATCTTaGTTGGCACATCCAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGYTQGISASPTEFCKEGIHSPS*LAHPVT Trigger: TGTCACTGGATGTGCCAATCAAGATGGAGAATGAAT...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTGCAGTCTTGGTCCAATaGGGGGTGCTGGCTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QKYHGVSMTIIMQSTASGAVLVQ*GVLALT Trigger: AGTGAGAGCCAGCACCCCTCATTGGACCAAGACTGC...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCCCCAGTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCCCCAGTGTAGCTGTCTaGAGAAGTCCTGCCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DFPPVESANIRALCIYSSPSVAV*RSPAGH Trigger: ATGACCGGCAGGACTTCTGCAGACAGCTACACTGGG...GGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGACTGGGGGAAAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR GCA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCCTGGATCCAGGCAGGTaGAATGTGCAGAGTAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GISASPTEFCKEGHYKNLLDPGR*NVQSKE Trigger: CTCTTTACTCTGCACATTGCACCTGCCTGGATCCAG...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAGAGAAATACTAGATTGGAAGACACTTGAGTGGTATGAGCATGTCCTGAGCAGGCTGGCCAGGTaGTCCAGCTCTGTATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQREILDWKTLEWYEHVLSRLAR*SSSVLR Trigger: CCTCAATACAGAGCTGGACCACCTGGCCAGCCTGCT...CAGGACATGCTCATACCACTCAAGTGTCTTCCAATCTAGTATTTCTCTCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | TATGTGATTCAGAATGCTCTACTGCTAGGCTACACACAGGGAATCTCAGCCTCATTCCTTGGAACTGCATaGTCAGAAAGCCAGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YVIQNALLLGYTQGISASFLGTA*SESQRC Trigger: GCACCTCTGGCTTTCTGACCATGCAGTTCCAAGGAA...TGAGGCTGAGATTCCCTGTGTGTAGCCTAGCAGTAGAGCATTCTGAATCACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTGGGAGATATGGCAGGTaGAAGGATCCACCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKYHGVSMTIIMQSTASGGRYGR*KDPPGP Trigger: AGGGCCAGGTGGATCCTTCCACCTGCCATATCTCCC...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGTGCATGGAGTGCCTATaGTCACTGGCAGGCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMCMECL*SLAGWV Trigger: TACCCAGCCTGCCAGTGACCATAGGCACTCCATGCA...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATTTTTCAGGTGCATCCTaGCAGGGAAACCAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTQGISASPTEFCKEGHYFSGAS*QGNQPD Trigger: ATCTGGTTGGTTTCCCTGCCAGGATGCACCTGAAAA...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGTCCAATGAGGGGTGCTaGCTCTCACTGTGGCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMSNEGC*LSLWLH Trigger: GTGTAGCCACAGTGAGAGCCAGCACCCCTCATTGGA...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAGGAGCTCTGCAGTCTTaGTCCAATGAGGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSATHQKYHGVSMTIIMQGALQS*SNEGCW Trigger: CCAGCACCCCTCATTGGACCAAGACTGCAGAGCTCC...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | GTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCCCAGCCCATCTCCACTGTGGCTACACATaGAGAAGTGATGAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VESANIRALCIYSSPAHLHCGYT*RSDEEA Trigger: AGCCTCCTCATCACTTCTTCATGTGTAGCCACAGTG...GAGATGGGCTGGGGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR GCA 90 bp | GAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCTCAGGCAGGTGCAATGTaGAGAGTAAAGAGGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ESQPHPLSSVKRVTIRISQAGAM*RVKRSM Trigger: CATGCTCCTCTTTACTCTGCACATTGCACCTGCCTG...AGAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATGCTTCAACTATATCCTaGGACCCAGATTCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTQGISASPTEFCKEGHYASTIS*DPDSFS Trigger: GGAGAATGAATCTGGGTCCCAGGATATAGTTGAAGC...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAGTGATGAGGAGGCTCTaGATCCAGGCAGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YSATHQKYHGVSMTIIMQVMRRL*IQAGAM Trigger: CATTGCACCTGCCTGGATCCAGAGCCTCCTCATCAC...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CACCACATGAGAAATGCATCTGGATTCTCTGTTAAAACAGAGCACCAAGAAAACTCCAATGAGGGGTGCTaGCTCTCACTGTGGCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: HHMRNASGFSVKTEHQENSNEGC*LSLWLH Trigger: GTGTAGCCACAGTGAGAGCCAGCACCCCTCATTGGA...GTTTTCTTGGTGCTCTGTTTTAACAGAGAATCCAGATGCATTTCTCATGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR TCA 90 bp | GAAGACCTAGTCCTGCCCACCCAACTTGATTCTGATAAGGTGATAGGCATCGCCAAATGTTTTGATGCATaGCATCTGTCTGATGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDLVLPTQLDSDKVIGIAKCFDA*HLSDES Trigger: GCTTTCATCAGACAGATGTCATGCATCAAAACATTT...GGCGATGCCTATCACCTTATCAGAATCAAGTTGGGTGGGCAGGACTAGGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR TCA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATTTGTCCCCTGAACAGTaGAATGCCATTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: YTQGISASPTEFCKEGHYLSPEQ*NAIFSI Trigger: AATGGAGAAAATGGCATTTCACTGTTCAGGGGACAA...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTTTGAGGCGGTCCCGGTaGCGTTTGGAAGGATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKYHGVSMTIIMQSTASGLRRSR*RLEGFD Trigger: ATCAAATCCTTCCAAACGGCACCGGGACCGCCTCAA...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR GCA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCGTCTGCCCTGTGCTTTaGCTTCAAGAATGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GISASPTEFCKEGHYKNLVCPVL*LQECAF Trigger: AAAAGCACATTCTTGAAGGCAAAGCACAGGGCAGAC...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATACAATGTCTGCCCTGTaGTTTGCCTTCAAGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGISASPTEFCKEGHYKNTMSAL*FAFKNV Trigger: CACATTCTTGAAGGCAAAGCACAGGGCAGACATTGT...ATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTGTGCTCCAGTTCAGGTaGCTCAAGTGTACTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKYHGVSMTIIMQSTASGVLQFR*LKCTGV Trigger: GACACCAGTACACTTGAGGCACCTGAACTGGAGCAC...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAGACTTCGCTGTTCTGTaGTCCAGTTCAGGTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSATHQKYHGVSMTIIMQDFAVL*SSSGAS Trigger: TGAGGCACCTGAACTGGAGCACAGAACAGCGAAGTC...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGGTCTCCTGCAAGGCTTaGAAGAAGCTCTTTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMVSCKA*KKLFTL Trigger: CAGGGTAAAGAGCTTCTTCCAAGCCTTGCAGGAGAC...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTATGGCTCATTCTTACTaGGCTGCCGAGTCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKYHGVSMTIIMQSTASGMAHSY*AAESAW Trigger: CCAAGCTGACTCGGCAGCCCAGTAAGAATGAGCCAT...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | AATTTTACCTGCTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGAGTGGAAGGATCCACCTaGCCCTGGTGGATATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NFTCCYSLIPTRYAMLGRVEGST*PWWISD Trigger: GTCGGATATCCACCAGGGCCAGGTGGATCCTTCCAC...TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | GAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCTTTTTCAGGTGCATCCTaGCAGGGAAACCAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESQPHPLSSVKRVTIRISFSGAS*QGNQPD Trigger: ATCTGGTTGGTTTCCCTGCCAGGATGCACCTGAAAA...AGAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| 3UTR CAA 72 bp | GCTTGGACACGAGGAACACATCATTTTGACAATCAGTaGAGCCCTGGCCAGCATAGAATACTGTTAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: AWTRGTHHFDNQ*SPGQHRILLAT Trigger: AGTAGCTAACAGTATTCTATGCTGGCCAGGGCTCAACTGATTGTCAAAATGATGTGTTCCTCGTGTCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATTTGTCCCCTGAACAGTaGAATGCCATTTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QGISASPTEFCKEGHYKNLSPEQ*NAIFSI Trigger: AATGGAGAAAATGGCATTTCACTGTTCAGGGGACAA...ATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTCACTGTGGCTACACATaGAGAAGTGATGAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKYHGVSMTIIMQSTASGHCGYT*RSDEEA Trigger: AGCCTCCTCATCACTTCTTCATGTGTAGCCACAGTG...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCCCCAGTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCCATACACATGTCTCCTaGAAGGCTTGGAAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFPPVESANIRALCIYSSHTHVS*KAWKKL Trigger: GAGCTTCTTCCAAGCCTTGCAGGAGACATGTGTATG...GGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGACTGGGGGAAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR GCA 90 bp | GAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCTACAATGTCTGCCCTGTaGTTTGCCTTCAAGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESQPHPLSSVKRVTIRISTMSAL*FAFKNV Trigger: CACATTCTTGAAGGCAAAGCACAGGGCAGACATTGT...AGAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| 3UTR CAA 72 bp | AGCATGCCTTACATCTATGACAGCACAACTTCCATCTaGCCCTTTGAAAATCTTCTGTGGGCTAAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMPYIYDSTTSI*PFENLLWAKDR Trigger: TCTGTCCTTAGCCCACAGAAGATTTTCAAAGGGCAAGATGGAAGTTGTGCTGTCATAGATGTAAGGCATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR TCA 90 bp | AATTTTACCTGCTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGAGGAGATGATATCAGGTaGAAATGGCAGCAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFTCCYSLIPTRYAMLGRGDDIR*KWQQAG Trigger: GCCAGCCTGCTGCCATTTTCACCTGATATCATCTCC...TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR TCA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAATGTTTTGATGCATaGCATCTGTCTGATGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQGISASPTEFCKEGHYKCFDA*HLSDES Trigger: GCTTTCATCAGACAGATGTCATGCATCAAAACATTT...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATTATCTGTTTGTCCCCTaGACAGTGAAATGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGISASPTEFCKEGHYKNYLFVP*TVKCHF Trigger: AAAATGGCATTTCACTGTTCAGGGGACAAACAGATA...ATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | AATTTTACCTGCTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGATGTCTGCAGAAGTCCTaGCGGTCATCCACATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NFTCCYSLIPTRYAMLGRCLQKS*RSSTWM Trigger: CATCCATGTGGATGACCGGCAGGACTTCTGCAGACA...TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCCCCAGTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCGTCTGCCCTGTGCTTTaGCTTCAAGAATGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DFPPVESANIRALCIYSSVCPVL*LQECAF Trigger: AAAAGCACATTCTTGAAGGCAAAGCACAGGGCAGAC...GGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGACTGGGGGAAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR GCA 90 bp | AATTTTACCTGCTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGAGACTTCGCTGTTCTGTaGTCCAGTTCAGGTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFTCCYSLIPTRYAMLGRDFAVL*SSSGAS Trigger: TGAGGCACCTGAACTGGAGCACAGAACAGCGAAGTC...TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAACTTAGTATGTGCTTCTaGTCCTCCTCTTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSATHQKYHGVSMTIIMQLSMCF*SSSSLS Trigger: GGACAGAGAAGAGGAGGACCAGAAGCACATACTAAG...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | GAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCTTTCCTGCTAAGTAATTaGGTTTGGGATGCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESQPHPLSSVKRVTIRISFLLSN*VWDAIL Trigger: CAGAATTGCATCCCAAACTCAATTACTTAGCAGGAA...AGAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATAGTCCACAATTGTTaGCGATGCATAAAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRIVHNC*RCIKDH Trigger: ATGATCTTTTATGCATCGGCAACAATTGTGGACTAT...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAAATTTTAGTTTTCCTTaGAACTGCATGGTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRESQPHPLSSVKRVTIRNFSFP*NCMVRK Trigger: CTTTCTGACCATGCAGTTCCAAGGAAAACTAAAATT...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAATATCTGTTTGTCCCCTaGACAGTGAAATGCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSATHQKYHGVSMTIIMQYLFVP*TVKCHF Trigger: AAAATGGCATTTCACTGTTCAGGGGACAAACAGATA...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR GCA 90 bp | GTCGAATCTGCAAATATAAGGGCACTTTGTATTTATTCCTCCCCAGCCCATCTCATAGTCCACAATTGTTaGCGATGCATAAAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VESANIRALCIYSSPAHLIVHNC*RCIKDH Trigger: ATGATCTTTTATGCATCGGCAACAATTGTGGACTAT...GAGATGGGCTGGGGAGGAATAAATACAAAGTGCCCTTATATTTGCAGATTCGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CCA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGAATTTTAGTTTTCCTTaGAACTGCATGGTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYSATHQKYHGVSMTIIMNFSFP*NCMVRK Trigger: CTTTCTGACCATGCAGTTCCAAGGAAAACTAAAATT...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR TCA 90 bp | AATTTTACCTGCTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGATTCCTGCTAAGTAATTaGGTTTGGGATGCAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFTCCYSLIPTRYAMLGRFLLSN*VWDAIL Trigger: CAGAATTGCATCCCAAACTCAATTACTTAGCAGGAA...TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS TCA 90 bp | AGGCCGAGTACTCTGAGGGCAAGCCCTTGCCTCCTTCTTGGGCCCTaGGCAGCTTCCCCAGGACAGTATTGTCTGTGTCAGCATGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSTLRASPCLLLGP*AASPGQYCLCQHVG Trigger: CCCCACATGCTGACACAGACAATACTGTCCTGGGGAAGCTGCTCAGGGCCCAAGAAGGAGGCAAGGGCTTGCCCTCAGAGTACTCGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS CCA 90 bp | TGTCAGCATGTGGGGACTGCCCAAACACCACCTGAGGAGGGTCCATaGCCCAGTGTAGCTGTCTGCAGAAGTCCTGCCGGTCATCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: CQHVGTAQTPPEEGP*PSVAVCRSPAGHPH Trigger: ATGTGGATGACCGGCAGGACTTCTGCAGACAGCTACACTGGGCCATGGACCCTCCTCAGGTGGTGTTTGGGCAGTCCCCACATGCTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS TCA 90 bp | CATAAAAGATCATCCCTTCGGCACTCACCACCAGAGCGAAGCCATTaGGAGACTCCAGCAGCAGCCGTCCTTCCTGCACGGGGAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HKRSSLRHSPPERSH*ETPAAAVLPARGTL Trigger: GAGGGTTCCCCGTGCAGGAAGGACGGCTGCTGCTGGAGTCTCTCAATGGCTTCGCTCTGGTGGTGAGTGCCGAAGGGATGATCTTTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS GCA 90 bp | ACCAGAGCGAAGCCATTGAGAGACTCCAGCAGCAGCCGTCCTTCCTaGACGGGGAACCCTCTGTATGAGTGTTCTTCAGGTGACAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TRAKPLRDSSSSRPS*TGNPLYECSSGDRA Trigger: AGCCCTGTCACCTGAAGAACACTCATACAGAGGGTTCCCCGTGCAGGAAGGACGGCTGCTGCTGGAGTCTCTCAATGGCTTCGCTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS-3UTR CAA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTGCCCTTGCCTCCTTCTaGGGCCCTGAGCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGYTQGISASPTEFCKEGALASF*GPEQLP Trigger: GGGAAGCTGCTCAGGGCCCAAGAAGGAGGCAAGGGC...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS TCA 90 bp | ACAGTATTGTCTGTGTCAGCATGTGGGGACTGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAGTGTAGCTGTCTGCAGAAGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVLSVSACGDCPNTT*GGSMAQCSCLQKSC Trigger: GCAGGACTTCTGCAGACAGCTACACTGGGCCATGGACCCTCCTCAGGTGGTGTTTGGGCAGTCCCCACATGCTGACACAGACAATACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS TCA 90 bp | TCAGAAAGCCAGAGGTGCTGTCCAGCAGGCAGCGAACACGACAAATaGAGCAGCGTGTCAAGAAGGCCGAGTACTCTGAGGGCAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SESQRCCPAGSEHDK*SSVSRRPSTLRASP Trigger: AGGGCTTGCCCTCAGAGTACTCGGCCTTCTTGACACGCTGCTTCATTTGTCGTGTTCGCTGCCTGCTGGACAGCACCTCTGGCTTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 90 bp | ATTCCAGTCAGAGGGATCCTAGATCCCAGACTGCCCTGGGAGATATaGCAGGTGGAAGGATCCACCTGGCCCTGGTGGATATCCGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: IPVRGILDPRLPWEI*QVEGSTWPWWISDK Trigger: CTTGTCGGATATCCACCAGGGCCAGGTGGATCCTTCCACCTGCCATATCTCCCAGGGCAGTCTGGGATCTAGGATCCCTCTGACTGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 90 bp | TACAGGCCTGCTGCCTATAGTCGGGCTCTGTTTTCAGGTGCATCCTaGCAGGGAAACCAACCAGATGTCCTCTGGCCATGTCGCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YRPAAYSRALFSGAS*QGNQPDVLWPCRWF Trigger: GAACCAGCGACATGGCCAGAGGACATCTGGTTGGTTTCCCTGCCAGGATGCACCTGAAAACAGAGCCCGACTATAGGCAGCAGGCCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTTGGTCCAGCTCTGTATaGAGGCGGTCCCGGTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LGYTQGISASPTEFCKEGWSSSV*RRSRCR Trigger: ACGGCACCGGGACCGCCTCAATACAGAGCTGGACCA...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | GATCTTCAGTTGTATCCTGGTCCCATGGTGAGTCTTCTTGAGAGCCAAGCAGCTTCTGAGGGCAAGCCCTaGCCTCCTTCTTGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLQLYPGPMVSLLESQAASEGKP*PPSWAL Trigger: CAGGGCCCAAGAAGGAGGCAAGGGCTTGCCCTCAGA...AGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGGATACAACTGAAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS TCA 90 bp | GGCTCATTCTTACTGGGCTGCCGAGTCAGCTTGGTAGTGCTCTCCTaGCTTCGCTGTTCTGTGCTCCAGTTCAGGTGCCTCAAGTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GSFLLGCRVSLVVLS*LRCSVLQFRCLKCT Trigger: AGTACACTTGAGGCACCTGAACTGGAGCACAGAACAGCGAAGTCAGGAGAGCACTACCAAGCTGACTCGGCAGCCCAGTAAGAATGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS TCA 90 bp | AGTCTTGGTCCAATGAGGGGTGCTGGCTCTCACTGTGGCTACACATaGAGAAGTGATGAGGAGGCTCTGGATCCAGGCAGGTGCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGPMRGAGSHCGYT*RSDEEALDPGRCNV Trigger: CACATTGCACCTGCCTGGATCCAGAGCCTCCTCATCACTTCTTCATGTGTAGCCACAGTGAGAGCCAGCACCCCTCATTGGACCAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 90 bp | GCCCAAACACCACCTGAGGAGGGTCCATGGCCCAGTGTAGCTGTCTaGAGAAGTCCTGCCGGTCATCCACATGGATGTAGTCATAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: AQTPPEEGPWPSVAV*RSPAGHPHGCSHKC Trigger: ACATTTATGACTACATCCATGTGGATGACCGGCAGGACTTCTGCAGACAGCTACACTGGGCCATGGACCCTCCTCAGGTGGTGTTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGTATCCTGGTCCCATGGTGAGTCTTCTTGAGAGCCAAGCAGCTCAAACCACCAGAGCGAAGCCATaGAGAGACTCCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLYPGPMVSLLESQAAQTTRAKP*RDSSSS Trigger: GCTGCTGCTGGAGTCTCTCAATGGCTTCGCTCTGGT...GGTTTGAGCTGCTTGGCTCTCAAGAAGACTCACCATGGGACCAGGATACAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGATCTGAGGGCAAGCCCTaGCCTCCTTCTTGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRESQPHPLSSVKRVTIRSEGKP*PPSWAL Trigger: CAGGGCCCAAGAAGGAGGCAAGGGCTTGCCCTCAGA...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS CCA 90 bp | ATCTCTGCTGTAGGGATTAGTTCCCAGCATACCATGACCAAGGTGTaGGGTACAGGCCTGCTGCCTATAGTCGGGCTCTGTTTTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISAVGISSQHTMTKV*GTGLLPIVGLCFQV Trigger: CACCTGAAAACAGAGCCCGACTATAGGCAGCAGGCCTGTACCCCACACCTTGGTCATGGTATGCTGGGAACTAATCCCTACAGCAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 90 bp | CTGGCTCTCACTGTGGCTACACATGAAGAAGTGATGAGGAGGCTCTaGATCCAGGCAGGTGCAATGTGCAGAGTAAAGAGGAGCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LALTVATHEEVMRRL*IQAGAMCRVKRSML Trigger: GAGCATGCTCCTCTTTACTCTGCACATTGCACCTGCCTGGATCCAGAGCCTCCTCATCACTTCTTCATGTGTAGCCACAGTGAGAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCTGTAAGACAACAGCCAGGGCAATGCCTCTTCATCAGTATGGCCTCATCCCGGTCCCGGTGCCGTTaGGAAGGATTTGATTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVRQQPGQCLFISMASSRSRCR*EGFDFS Trigger: TGAGAAATCAAATCCTTCCAAACGGCACCGGGACCG...GGATGAGGCCATACTGATGAAGAGGCATTGCCCTGGCTGTTGTCTTACAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS TCA 90 bp | CAGAGGCTCACGCTTAACAATAGGAGCTCTGCAGTCTTGGTCCAATaGGGGGTGCTGGCTCTCACTGTGGCTACACATGAAGAAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRLTLNNRSSAVLVQ*GVLALTVATHEEVM Trigger: CATCACTTCTTCATGTGTAGCCACAGTGAGAGCCAGCACCCCTCATTGGACCAAGACTGCAGAGCTCCTATTGTTAAGCGTGAGCCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS TCA 90 bp | ATCTGGCTAGAGCCCGGGCCCAGTGGCTCCTATCTGTTTGTCCCCTaGACAGTGAAATGCCATTTTCTCCATTGCTCTTTCCTGCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IWLEPGPSGSYLFVP*TVKCHFLHCSFLLS Trigger: ACTTAGCAGGAAAGAGCAATGGAGAAAATGGCATTTCACTGTTCAGGGGACAAACAGATAGGAGCCACTGGGCCCGGGCTCTAGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 90 bp | CATGAAGAAGTGATGAGGAGGCTCTGGATCCAGGCAGGTGCAATGTaGAGAGTAAAGAGGAGCATGCTCCCTACAGGATCCAACAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: HEEVMRRLWIQAGAM*RVKRSMLPTGSNSI Trigger: GATACTGTTGGATCCTGTAGGGAGCATGCTCCTCTTTACTCTGCACATTGCACCTGCCTGGATCCAGAGCCTCCTCATCACTTCTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 90 bp | GACATCTGTCTGATGAAAGCCCAGATAGTCCACAATTGTTGCCGATaGATAAAAGATCATCCCTTCGGCACTCACCACCAGAGCGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DICLMKAQIVHNCCR*IKDHPFGTHHQSEA Trigger: GGCTTCGCTCTGGTGGTGAGTGCCGAAGGGATGATCTTTTATGCATCGGCAACAATTGTGGACTATCTGGGCTTTCATCAGACAGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | CTAGGCTACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTTGTCTGCCCTGTGCTTaGCCTTCAAGAATGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGYTQGISASPTEFCKEGCLPCA*PSRMCF Trigger: AAAGCACATTCTTGAAGGCAAAGCACAGGGCAGACA...ACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTAGCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | CAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATTTCCCCAGGACAGTATaGTCTGTGTCAGCATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGISASPTEFCKEGHYKNFPRTV*SVSACG Trigger: CCCACATGCTGACACAGACAATACTGTCCTGGGGAA...ATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCTTCCCCAGGACAGTATaGTCTGTGTCAGCATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GISASPTEFCKEGHYKNLFPRTV*SVSACG Trigger: CCCACATGCTGACACAGACAATACTGTCCTGGGGAA...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | AATTTTACCTGCTGTTATTCATTAATACCCACAAGGTATGCTATGCTTGGCAGAGCCCTTGCCTCCTTCTaGGGCCCTGAGCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NFTCCYSLIPTRYAMLGRALASF*GPEQLP Trigger: GGGAAGCTGCTCAGGGCCCAAGAAGGAGGCAAGGGC...TCTGCCAAGCATAGCATACCTTGTGGGTATTAATGAATAACAGCAGGTAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | CACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGACTAAAAGAAGCCATGTaGCTGGCACTAAGCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRESQPHPLSSVKRVTIRLKEAM*LALSMP Trigger: GGGCATGCTTAGTGCCAGCAACATGGCTTCTTTTAG...TCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 90 bp | ATGCATGACATCTGTCTGATGAAAGCCCAGATAGTCCACAATTGTTaGCGATGCATAAAAGATCATCCCTTCGGCACTCACCACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MHDICLMKAQIVHNC*RCIKDHPFGTHHQS Trigger: GCTCTGGTGGTGAGTGCCGAAGGGATGATCTTTTATGCATCGGCAACAATTGTGGACTATCTGGGCTTTCATCAGACAGATGTCATGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS GCA 90 bp | TTTTCATTTTCATCTCAGTTACAGAAGGCAAGACTGGTGCCACAATaGAGAACAATGAGAGTCGAGGAGGCAGGGCTGTTCCTGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSFSSQLQKARLVPQ*RTMRVEEAGLFLMV Trigger: CACCATCAGGAACAGCCCTGCCTCCTCGACTCTCATTGTTCTGCATTGTGGCACCAGTCTTGCCTTCTGTAACTGAGATGAAAATGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCGCCGTTTGGAAGGATTaGATTTCTCAGCTCCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GISASPTEFCKEGHYKNLAVWKD*ISQLPW Trigger: CCATGGGAGCTGAGAAATCAAATCCTTCCAAACGGC...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | CAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCGCAGGACAGAAAGCTaGTCCAGCTTGGAGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: QGISASPTEFCKEGHYKNRRTES*SSLEMI Trigger: TATCATCTCCAAGCTGGACAAGCTTTCTGTCCTGCG...ATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | TACACACAGGGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATTGTCTGCCCTGTGCTTaGCCTTCAAGAATGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YTQGISASPTEFCKEGHYCLPCA*PSRMCF Trigger: AAAGCACATTCTTGAAGGCAAAGCACAGGGCAGACA...ATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCCCTGTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | GAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCTCTAAAAGAAGCCATGTaGCTGGCACTAAGCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESQPHPLSSVKRVTIRISLKEAM*LALSMP Trigger: GGGCATGCTTAGTGCCAGCAACATGGCTTCTTTTAG...AGAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | CACCACATGAGAAATGCATCTGGATTCTCTGTTAAAACAGAGCACCAAGAAAACTGTCTCCTGCAAGGCTaGGAAGAAGCTCTTTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: HHMRNASGFSVKTEHQENCLLQG*EEALYP Trigger: AGGGTAAAGAGCTTCTTCCAAGCCTTGCAGGAGACA...GTTTTCTTGGTGCTCTGTTTTAACAGAGAATCCAGATGCATTTCTCATGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCATTCCATCAGAGCCTTaGGATGGGATCACAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GISASPTEFCKEGHYKNLIPSEP*DGITVL Trigger: TAAAACTGTGATCCCATCCAAAGGCTCTGATGGAAT...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCCAGATAGTCCACAATaGTTGCCGATGCATAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PYSATHQKYHGVSMTIIMPDSPQ*LPMHKR Trigger: TCTTTTATGCATCGGCAACAATTGTGGACTATCTGG...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | GGAATCTCAGCCTCACCCACTGAGTTCTGTAAAGAGGGTCACTATAAGAATCTCGTAGTCATAAATGTTTaGATGCATGACATCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GISASPTEFCKEGHYKNLVVINV*MHDICL Trigger: CAGACAGATGTCATGCATCAAAACATTTATGACTAC...GAGATTCTTATAGTGACCCTCTTTACAGAACTCAGTGGGTGAGGCTGAGATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | CCATACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGGATAGTCCACAATTGTaGCCGATGCATAAAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PYSATHQKYHGVSMTIIMDSPQL*PMHKRS Trigger: TGATCTTTTATGCATCGGCAACAATTGTGGACTATC...CATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTCCAGATAGTCCACAATaGTTGCCGATGCATAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKYHGVSMTIIMQSTASGPDSPQ*LPMHKR Trigger: TCTTTTATGCATCGGCAACAATTGTGGACTATCTGG...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS-3UTR CAA 90 bp | CACCACATGAGAAATGCATCTGGATTCTCTGTTAAAACAGAGCACCAAGAAAACATTCCATCAGAGCCTTaGGATGGGATCACAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HHMRNASGFSVKTEHQENIPSEP*DGITVL Trigger: TAAAACTGTGATCCCATCCAAAGGCTCTGATGGAAT...GTTTTCTTGGTGCTCTGTTTTAACAGAGAATCCAGATGCATTTCTCATGTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS-3UTR CAA 90 bp | CAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAAGTACAGCCTCGGGTGATAGTCCACAATTGTaGCCGATGCATAAAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: QKYHGVSMTIIMQSTASGDSPQL*PMHKRS Trigger: TGATCTTTTATGCATCGGCAACAATTGTGGACTATC...ACCCGAGGCTGTACTTTGCATAATGATAGTCATGGAAACACCATGGTATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS-3UTR CAA 90 bp | TACTCAGCGACCCACCAAAAATACCATGGTGTTTCCATGACTATCATTATGCAAGTAGTCATAAATGTTTaGATGCATGACATCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSATHQKYHGVSMTIIMQVVINV*MHDICL Trigger: CAGACAGATGTCATGCATCAAAACATTTATGACTAC...TTGCATAATGATAGTCATGGAAACACCATGGTATTTTTGGTGGGTCGCTGAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS TCA 72 bp | TCATCCCTTCGGCACTCACCACCAGAGCGAAGCCATTaGGAGACTCCAGCAGCAGCCGTCCTTCCTGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLRHSPPERSH*ETPAAAVLPAR Trigger: CCGTGCAGGAAGGACGGCTGCTGCTGGAGTCTCTCAATGGCTTCGCTCTGGTGGTGAGTGCCGAAGGGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS TCA 72 bp | TCTGTGTCAGCATGTGGGGACTGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAGTGTAGCTGTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVSACGDCPNTT*GGSMAQCSCLQ Trigger: CTGCAGACAGCTACACTGGGCCATGGACCCTCCTCAGGTGGTGTTTGGGCAGTCCCCACATGCTGACACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS CAA 72 bp | ATCATCCCTTCGGCACTCACCACCAGAGCGAAGCCATaGAGAGACTCCAGCAGCAGCCGTCCTTCCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: IIPSALTTRAKP*RDSSSSRPSCT Trigger: CGTGCAGGAAGGACGGCTGCTGCTGGAGTCTCTCAATGGCTTCGCTCTGGTGGTGAGTGCCGAAGGGATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
||
| CDS GCA 72 bp | CCACCTGAGGAGGGTCCATGGCCCAGTGTAGCTGTCTaGAGAAGTCCTGCCGGTCATCCACATGGATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PPEEGPWPSVAV*RSPAGHPHGCS Trigger: ACTACATCCATGTGGATGACCGGCAGGACTTCTGCAGACAGCTACACTGGGCCATGGACCCTCCTCAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS CCA 72 bp | AGAGGGATCCTAGATCCCAGACTGCCCTGGGAGATATaGCAGGTGGAAGGATCCACCTGGCCCTGGTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: RGILDPRLPWEI*QVEGSTWPWWI Trigger: TATCCACCAGGGCCAGGTGGATCCTTCCACCTGCCATATCTCCCAGGGCAGTCTGGGATCTAGGATCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS CCA 72 bp | ATTCCAGTCAGAGGGATCCTAGATCCCAGACTGCCCTaGGAGATATGGCAGGTGGAAGGATCCACCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: IPVRGILDPRLP*EIWQVEGSTWP Trigger: GGGCCAGGTGGATCCTTCCACCTGCCATATCTCCCAGGGCAGTCTGGGATCTAGGATCCCTCTGACTGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS TCA 72 bp | CAGAGGTGCTGTCCAGCAGGCAGCGAACACGACAAATaGAGCAGCGTGTCAAGAAGGCCGAGTACTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QRCCPAGSEHDK*SSVSRRPSTLR Trigger: CCTCAGAGTACTCGGCCTTCTTGACACGCTGCTTCATTTGTCGTGTTCGCTGCCTGCTGGACAGCACCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
||
| CDS TCA 72 bp | TTACTGGGCTGCCGAGTCAGCTTGGTAGTGCTCTCCTaGCTTCGCTGTTCTGTGCTCCAGTTCAGGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLGCRVSLVVLS*LRCSVLQFRCL Trigger: GAGGCACCTGAACTGGAGCACAGAACAGCGAAGTCAGGAGAGCACTACCAAGCTGACTCGGCAGCCCAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 72 bp | CAGCTTCCCCAGGACAGTATTGTCTGTGTCAGCATGTaGGGACTGCCCAAACACCACCTGAGGAGGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: QLPQDSIVCVSM*GLPKHHLRRVH Trigger: ATGGACCCTCCTCAGGTGGTGTTTGGGCAGTCCCCACATGCTGACACAGACAATACTGTCCTGGGGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 72 bp | AAGCCATTGAGAGACTCCAGCAGCAGCCGTCCTTCCTaGACGGGGAACCCTCTGTATGAGTGTTCTTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KPLRDSSSSRPS*TGNPLYECSSG Trigger: ACCTGAAGAACACTCATACAGAGGGTTCCCCGTGCAGGAAGGACGGCTGCTGCTGGAGTCTCTCAATGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS CCA 72 bp | GTAGGGATTAGTTCCCAGCATACCATGACCAAGGTGTaGGGTACAGGCCTGCTGCCTATAGTCGGGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VGISSQHTMTKV*GTGLLPIVGLC Trigger: ACAGAGCCCGACTATAGGCAGCAGGCCTGTACCCCACACCTTGGTCATGGTATGCTGGGAACTAATCCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 72 bp | CACAGACATGAAGATCTGGCTAGAGCCCGGGCCCAGTaGCTCCTATCTGTTTGTCCCCTGAACAGTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: HRHEDLARARAQ*LLSVCPLNSEM Trigger: CATTTCACTGTTCAGGGGACAAACAGATAGGAGCCACTGGGCCCGGGCTCTAGCCAGATCTTCATGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 72 bp | AGAGGCTCACGCTTAACAATAGGAGCTCTGCAGTCTTaGTCCAATGAGGGGTGCTGGCTCTCACTGTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: RGSRLTIGALQS*SNEGCWLSLWL Trigger: TAGCCACAGTGAGAGCCAGCACCCCTCATTGGACCAAGACTGCAGAGCTCCTATTGTTAAGCGTGAGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 72 bp | CCTGGTGGATATCCGACAAGGGTCTGTTCATCTGACTaGAGTAGGCACCAGTGGGATGGTCTAGTGAATCTC | + |
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Preference number: 6 (lower is better) Translates to: PGGYPTRVCSSD*SRHQWDGLVNL Trigger: GAGATTCACTAGACCATCCCACTGGTGCCTACTGCAGTCAGATGAACAGACCCTTGTCGGATATCCACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS TCA 72 bp | ACGCTTAACAATAGGAGCTCTGCAGTCTTGGTCCAATaGGGGGTGCTGGCTCTCACTGTGGCTACACATGAA | + |
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Preference number: 6 (lower is better) Translates to: TLNNRSSAVLVQ*GVLALTVATHE Trigger: TTCATGTGTAGCCACAGTGAGAGCCAGCACCCCTCATTGGACCAAGACTGCAGAGCTCCTATTGTTAAGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 72 bp | TCATCTCAGTTACAGAAGGCAAGACTGGTGCCACAATaGAGAACAATGAGAGTCGAGGAGGCAGGGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SSQLQKARLVPQ*RTMRVEEAGLF Trigger: GAACAGCCCTGCCTCCTCGACTCTCATTGTTCTGCATTGTGGCACCAGTCTTGCCTTCTGTAACTGAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 72 bp | CATCCAGTGACAATACTGGGTTGCATGGAGTGCCTATaGTCACTGGCAGGCTGGGTAATTTTGCATCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HPVTILGCMECL*SLAGWVILHPL Trigger: CAGAGGATGCAAAATTACCCAGCCTGCCAGTGACCATAGGCACTCCATGCAACCCAGTATTGTCACTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CCA 72 bp | ACTGTGGCTACACATGAAGAAGTGATGAGGAGGCTCTaGATCCAGGCAGGTGCAATGTGCAGAGTAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TVATHEEVMRRL*IQAGAMCRVKR Trigger: CCTCTTTACTCTGCACATTGCACCTGCCTGGATCCAGAGCCTCCTCATCACTTCTTCATGTGTAGCCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS TCA 72 bp | TTTGATTTCTCAGCTCCCATGGTAAGCCTCCGCTTCTaGATGGGCTTCCTTCTCTTCCTACCGGCGTATGTA | + |
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Preference number: 6 (lower is better) Translates to: FDFSAPMVSLRF*MGFLLFLPAYV Trigger: TACATACGCCGGTAGGAAGAGAAGGAAGCCCATTCAGAAGCGGAGGCTTACCATGGGAGCTGAGAAATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS GCA 72 bp | CTGATGAAAGCCCAGATAGTCCACAATTGTTGCCGATaGATAAAAGATCATCCCTTCGGCACTCACCACCAG | + |
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Preference number: 6 (lower is better) Translates to: LMKAQIVHNCCR*IKDHPFGTHHQ Trigger: CTGGTGGTGAGTGCCGAAGGGATGATCTTTTATGCATCGGCAACAATTGTGGACTATCTGGGCTTTCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS CAA 90 bp | GTGCTAGCTTCAACTATATCCTGGGACCCAGATTCATTCTCCATCTaGATTGGCACATCCAGTGACAATACTGGGTTGCATGGAGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VLASTISWDPDSFSI*IGTSSDNTGLHGVP Trigger: AGGCACTCCATGCAACCCAGTATTGTCACTGGATGTGCCAATCAAGATGGAGAATGAATCTGGGTCCCAGGATATAGTTGAAGCTAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS TCA 72 bp | CAACTATATCCTGGGACCCAGATTCATTCTCCATCTTaGTTGGCACATCCAGTGACAATACTGGGTTGCATG | + |
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Preference number: 6 (lower is better) Translates to: QLYPGTQIHSPS*LAHPVTILGCM Trigger: CATGCAACCCAGTATTGTCACTGGATGTGCCAATCAAGATGGAGAATGAATCTGGGTCCCAGGATATAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS GCA 72 bp | ATCTGTCTGATGAAAGCCCAGATAGTCCACAATTGTTaGCGATGCATAAAAGATCATCCCTTCGGCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: ICLMKAQIVHNC*RCIKDHPFGTH Trigger: GTGAGTGCCGAAGGGATGATCTTTTATGCATCGGCAACAATTGTGGACTATCTGGGCTTTCATCAGACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS GCA 72 bp | GCCCTTGAGTCCATCGTAACCACAATGTCTGCCCTGTaGTTTGCCTTCAAGAATGTGCTTTTCATTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: ALESIVTTMSAL*FAFKNVLFIFI Trigger: GATGAAAATGAAAAGCACATTCTTGAAGGCAAAGCACAGGGCAGACATTGTGGTTACGATGGACTCAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CAA 72 bp | CATCTGTCTGATGAAAGCCCAGATAGTCCACAATTGTaGCCGATGCATAAAAGATCATCCCTTCGGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: HLSDESPDSPQL*PMHKRSSLRHS Trigger: TGAGTGCCGAAGGGATGATCTTTTATGCATCGGCAACAATTGTGGACTATCTGGGCTTTCATCAGACAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022059.14 |
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| CDS CAA 72 bp | TCAACTATATCCTGGGACCCAGATTCATTCTCCATCTaGATTGGCACATCCAGTGACAATACTGGGTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: STISWDPDSFSI*IGTSSDNTGLH Trigger: ATGCAACCCAGTATTGTCACTGGATGTGCCAATCAAGATGGAGAATGAATCTGGGTCCCAGGATATAGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS CAA 72 bp | CTGCCGGTCATCCACATGGATGTAGTCATAAATGTTTaGATGCATGACATCTGTCTGATGAAAGCCCAGATA | + |
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Preference number: 6 (lower is better) Translates to: LPVIHMDVVINV*MHDICLMKAQI Trigger: TATCTGGGCTTTCATCAGACAGATGTCATGCATCAAAACATTTATGACTACATCCATGTGGATGACCGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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| CDS TCA 72 bp | CATCCACATGGATGTAGTCATAAATGTTTTGATGCATaGCATCTGTCTGATGAAAGCCCAGATAGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: HPHGCSHKCFDA*HLSDESPDSPQ Trigger: TTGTGGACTATCTGGGCTTTCATCAGACAGATGTCATGCATCAAAACATTTATGACTACATCCATGTGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022059.14 ENSMUST00000109640.8 |
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