Pregenerated sensors for AHR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019256Ensembl transcript IDs: ENSMUST00000110811.3, ENSMUST00000116436.9
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATCGGGAAGAGGCCGGGCTTCCGCCAGGTGATGGAGATGGCCAGTaGTCTGAGCAGCGTGGCCAATGCTGCTCAAGTCGGACGAATAGG | + |
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Preference number: 1 (lower is better) Translates to: YREEAGLPPGDGDGQ*SEQRGQCCSSRTNR Trigger: CCTATTCGTCCGACTTGAGCAGCATTGGCCACGCTGCTCAGACCACTGGCCATCTCCATCACCTGGCGGAAGCCCGGCCTCTTCCCGATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR TCA 90 bp | AATGAATTTCATCCTGGCATGGGAGCTACAGGAATCCACCGGGTGTaGTATCGGGAAGAGGCCGGGCTTCCGCCAGGTGATGGAGATGGC | + |
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Preference number: 1 (lower is better) Translates to: NEFHPGMGATGIHRV*YREEAGLPPGDGDG Trigger: GCCATCTCCATCACCTGGCGGAAGCCCGGCCTCTTCCCGATATCACACCCGGTGGATTCCTGTAGCTCCCATGCCAGGATGAAATTCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR CCA 90 bp | GTTCTCTGGAGGAAGCTGGTCTGGGGTATAATAGACTGCTGCCTGTaGAGGGCCATGGGCTTCGTCCACTCCTTGTGCAGAGTCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: VLWRKLVWGIIDCCL*RAMGFVHSLCRVWV Trigger: AACCCAGACTCTGCACAAGGAGTGGACGAAGCCCATGGCCCTCCACAGGCAGCAGTCTATTATACCCCAGACCAGCTTCCTCCAGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CCA 90 bp | CCTCAGCCGGCACCTGAAGCACCTCTCCATGAAAGAAGCGTTCTCTaGAGGAAGCTGGTCTGGGGTATAATAGACTGCTGCCTGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PQPAPEAPLHERSVL*RKLVWGIIDCCLWR Trigger: CCTCCACAGGCAGCAGTCTATTATACCCCAGACCAGCTTCCTCCAGAGAACGCTTCTTTCATGGAGAGGTGCTTCAGGTGCCGGCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR GCA 90 bp | GGTTCGAATTTCCAGGATGGAGGGTGGCTGAAGTGGAGTAGCTATTaGAAACAAAGCCAGTTGTGGAGGAAGCAGCGCTCCGTCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: GSNFQDGGWLKWSSY*KQSQLWRKQRSVLP Trigger: GGGAAGGACGGAGCGCTGCTTCCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CCA 90 bp | GGAGGGTGGCTGAAGTGGAGTAGCTATTGCAAACAAAGCCAGTTGTaGAGGAAGCAGCGCTCCGTCCTTCCCTTTCTTGTTCTGTCCATG | + |
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Preference number: 1 (lower is better) Translates to: GGWLKWSSYCKQSQL*RKQRSVLPFLVLSM Trigger: CATGGACAGAACAAGAAAGGGAAGGACGGAGCGCTGCTTCCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR TCA 90 bp | TGCGGATGTGGGATTCTGCACAGTGAAGTATGTCTGCAGCATGGATaGACTGGTACCCCGATCCTCTTGTGCACAGCTCTACTTCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: CGCGILHSEVCLQHG*TGTPILLCTALLLY Trigger: ATACAGAAGTAGAGCTGTGCACAAGAGGATCGGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR GCA 90 bp | AGTCTTAATCATGCGGATGTGGGATTCTGCACAGTGAAGTATGTCTaGAGCATGGATGAACTGGTACCCCGATCCTCTTGTGCACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: SLNHADVGFCTVKYV*SMDELVPRSSCAQL Trigger: GAGCTGTGCACAAGAGGATCGGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATGATTAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR TCA 90 bp | CCACTTTCTCCAGTCTTAATCATGCGGATGTGGGATTCTGCACAGTaGAGTATGTCTGCAGCATGGATGAACTGGTACCCCGATCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: PLSPVLIMRMWDSAQ*SMSAAWMNWYPDPL Trigger: AAGAGGATCGGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATGATTAAGACTGGAGAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR TCA 90 bp | GTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTaGGAACCACTTCTGGATTTGAATACATCTCAGTTTGGGATCTCA | + |
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Preference number: 1 (lower is better) Translates to: VKGSVYLPREPQSTG*EPLLDLNTSQFGIS Trigger: TGAGATCCCAAACTGAGATGTATTCAAATCCAGAAGTGGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR GCA 90 bp | TGTCATGCCACTTTCTCCAGTCTTAATCATGCGGATGTGGGATTCTaGACAGTGAAGTATGTCTGCAGCATGGATGAACTGGTACCCCGA | + |
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Preference number: 1 (lower is better) Translates to: CHATFSSLNHADVGF*TVKYVCSMDELVPR Trigger: TCGGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATGATTAAGACTGGAGAAAGTGGCATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR GCA 90 bp | AATCAAGCGTGCATTGGACTGGACCCACCTCCAGCGACTGTGTTTTaGAAGAAGCCGGAAAACTGTCATGCCACTTTCTCCAGTCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: NQACIGLDPPPATVF*KKPENCHATFSSLN Trigger: ATTAAGACTGGAGAAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTGGAGGTGGGTCCAGTCCAATGCACGCTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CCA 90 bp | GATGAAGTTTTTGGTTCGAATTTCCAGGATGGAGGGTGGCTGAAGTaGAGTAGCTATTGCAAACAAAGCCAGTTGTGGAGGAAGCAGCGC | + |
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Preference number: 1 (lower is better) Translates to: DEVFGSNFQDGGWLK*SSYCKQSQLWRKQR Trigger: GCGCTGCTTCCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAACCAAAAACTTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR GCA 90 bp | AGTGGCGATGATGTAATCTGGTCTTCCATTTCTGTAAATCAAGCGTaGATTGGACTGGACCCACCTCCAGCGACTGTGTTTTGCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: SGDDVIWSSISVNQA*IGLDPPPATVFCKK Trigger: CTTCTTGCAAAACACAGTCGCTGGAGGTGGGTCCAGTCCAATGCACGCTTGATTTACAGAAATGGAAGACCAGATTACATCATCGCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CCA 90 bp | GGTCCTGAAGATGAAGTTTTTGGTTCGAATTTCCAGGATGGAGGGTaGCTGAAGTGGAGTAGCTATTGCAAACAAAGCCAGTTGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GPEDEVFGSNFQDGG*LKWSSYCKQSQLWR Trigger: CCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAACCAAAAACTTCATCTTCAGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CCA 90 bp | TCCTTCTTCATCCGTCAGTGGTCTCTGAGTGGCGATGATGTAATCTaGTCTTCCATTTCTGTAAATCAAGCGTGCATTGGACTGGACCCA | + |
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Preference number: 1 (lower is better) Translates to: SFFIRQWSLSGDDVI*SSISVNQACIGLDP Trigger: TGGGTCCAGTCCAATGCACGCTTGATTTACAGAAATGGAAGACCAGATTACATCATCGCCACTCAGAGACCACTGACGGATGAAGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR TCA 90 bp | CTGAAGATGAAGTTTTTGGTTCGAATTTCCAGGATGGAGGGTGGCTaGAGTGGAGTAGCTATTGCAAACAAAGCCAGTTGTGGAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LKMKFLVRISRMEGG*SGVAIANKASCGGS Trigger: GCTTCCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAACCAAAAACTTCATCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR TCA 90 bp | AATGCTCTCGTCCTTCTTCATCCGTCAGTGGTCTCTGAGTGGCGATaGTGTAATCTGGTCTTCCATTTCTGTAAATCAAGCGTGCATTGG | + |
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Preference number: 1 (lower is better) Translates to: NALVLLHPSVVSEWR*CNLVFHFCKSSVHW Trigger: CCAATGCACGCTTGATTTACAGAAATGGAAGACCAGATTACATCATCGCCACTCAGAGACCACTGACGGATGAAGAAGGACGAGAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CCA 90 bp | CGGGTTTTAAACTCCTTCTCTAAACACAAGAATCGAAATCTGTTTTaGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCT | + |
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Preference number: 1 (lower is better) Translates to: RVLNSFSKHKNRNLF*RKCTDVQPSQFWYP Trigger: AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATTTCGATTCTTGTGTTTAGAGAAGGAGTTTAAAACCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR TCA 90 bp | AAAGAAGAGTCAACATTTCAGTGGATCTCAACCTTTCTAATGCTGTaGCCCTTGAATACAGTTGCTCAGGACCCCAACCATAAAATTATT | + |
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Preference number: 1 (lower is better) Translates to: KEESTFQWISTFLML*PLNTVAQDPNHKII Trigger: AATAATTTTATGGTTGGGGTCCTGAGCAACTGTATTCAAGGGTCACAGCATTAGAAAGGTTGAGATCCACTGAAATGTTGACTCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGTACAACACAGCCTCTCCGGTAGCAAACATGAAGGGCAGCGACGTACTTCGAAGCGTGCATTGGACTaGACCCACCTCCAGCGACTG | + |
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Preference number: 2 (lower is better) Translates to: LVQHSLSGSKHEGQRRTSKRALD*THLQRL Trigger: CAGTCGCTGGAGGTGGGTCCAGTCCAATGCACGCTT...CGAAGTACGTCGCTGCCCTTCATGTTTGCTACCGGAGAGGCTGTGTTGTACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CAA 90 bp | GATGGAGGGTGGCTGAAGTGGAGTAGCTATTGCAAACAAAGCCAGTaGTGGAGGAAGCAGCGCTCCGTCCTTCCCTTTCTTGTTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: DGGWLKWSSYCKQSQ*WRKQRSVLPFLVLS Trigger: GGACAGAACAAGAAAGGGAAGGACGGAGCGCTGCTTCCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCACAGTGAAGTATGTCTGCAGCATGGATGAACTGGTACCCCGATCCTCTATAGACTGCTGCCTGTaGAGGGCCATGGGCTTCGTC | + |
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Preference number: 2 (lower is better) Translates to: FCTVKYVCSMDELVPRSSIDCCL*RAMGFV Trigger: GACGAAGCCCATGGCCCTCCACAGGCAGCAGTCTAT...AGAGGATCGGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTGTGGAGGAAGCAGCGCTCCGTCCTTCCCTTTCTTGTTCTGTCCATGAAGAAAGAAGCGTTCTCTaGAGGAAGCTGGTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PVVEEAALRPSLSCSVHEERSVL*RKLVWG Trigger: ACCCCAGACCAGCTTCCTCCAGAGAACGCTTCTTTC...TTCATGGACAGAACAAGAAAGGGAAGGACGGAGCGCTGCTTCCTCCACAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR GCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAGCCACCTCCCCTCACTaGAGCGTAGTGGACATAGGC | + |
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Preference number: 2 (lower is better) Translates to: EQCIWQSDTFAILAAKGVATSPH*SVVDIG Trigger: GCCTATGTCCACTACGCTGCAGTGAGGGGAGGTGGC...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGTTGTGGAGGAAGCAGCGCTCCGTCCTTCCCTTTCTTGTTCTGTCCATGAATGCCAGAAAACCAGATaGATTATCCAGCAGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: PVVEEAALRPSLSCSVHECQKTR*IIQQAP Trigger: AGGTGCCTGCTGGATAATTCATCTGGTTTTCTGGCA...TTCATGGACAGAACAAGAAAGGGAAGGACGGAGCGCTGCTTCCTCCACAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCACACATTTGCCATATTaGCAGCAAAGGGTGTATCAC | + |
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Preference number: 2 (lower is better) Translates to: CERVSLSPTGATEHRLRTTHLPY*QQRVYH Trigger: GTGATACACCCTTTGCTGCCAATATGGCAAATGTGT...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR TCA 90 bp | CGACTGTGTTTTGCAAGAAGCCGGAAAACTGTCATGCCACTTTCTCCAGTCTTAAGGATGGAGGGTGGCTaGAGTGGAGTAGCTATTGCA | + |
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Preference number: 2 (lower is better) Translates to: RLCFARSRKTVMPLSPVLRMEGG*SGVAIA Trigger: TGCAATAGCTACTCCACTTCAGCCACCCTCCATCCT...TAAGACTGGAGAAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR GCA 90 bp | GTAGCAAACATGAAGGGCAGCGACGTACTTCGCTTCTGTAAATGCTCTCGTCCTTCTGTAAATCAAGCGTaGATTGGACTGGACCCACCT | + |
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Preference number: 2 (lower is better) Translates to: VANMKGSDVLRFCKCSRPSVNQA*IGLDPP Trigger: AGGTGGGTCCAGTCCAATGCACGCTTGATTTACAGA...AGGACGAGAGCATTTACAGAAGCGAAGTACGTCGCTGCCCTTCATGTTTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CCA 90 bp | GCACAGCTCTACTTCTGTATAGCCCAGAATAAGCTGCCCTTTGGCATCACAACCGGAGGGTGGCTGAAGTaGAGTAGCTATTGCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: AQLYFCIAQNKLPFGITTGGWLK*SSYCKQ Trigger: TTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCC...GGTTGTGATGCCAAAGGGCAGCTTATTCTGGGCTATACAGAAGTAGAGCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CCA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCAAATTTCATCCTGGCATaGGAGCTACAGGAATCCACC | + |
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Preference number: 2 (lower is better) Translates to: SVVDIGTFSTFYGGLLISNFILA*ELQEST Trigger: GGTGGATTCCTGTAGCTCCCATGCCAGGATGAAATT...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR CCA 90 bp | CGACTGTGTTTTGCAAGAAGCCGGAAAACTGTCATGCCACTTTCTCCAGTCTTATTCGAATTTCCAGGATaGAGGGTGGCTGAAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RLCFARSRKTVMPLSPVLFEFPG*RVAEVE Trigger: CTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAA...TAAGACTGGAGAAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAACATCGTGGAGGTTTCTaGGAAACCTTCAGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKHRGGF*ETFSSS Trigger: GCTGCTGCTGAAGGTTTCCCAGAAACCTCCACGATG...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR TCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAAAAACACCTTGCACCTaGCATGGCATCTTCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: EQCIWQSDTFAILAAKGVKTPCT*HGIFHL Trigger: AAGATGGAAGATGCCATGTCAGGTGCAAGGTGTTTT...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR CCA 90 bp | GAGATCTCGTACAACACAGCCTCTCCGGTAGCAAACATGAAGGGCAGCGACGTATACTTTAACCTCCCTTaGAAATTCATTGCCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: EISYNTASPVANMKGSDVYFNLP*KFIARK Trigger: TTTTCTGGCAATGAATTTCCAAGGGAGGTTAAAGTA...TACGTCGCTGCCCTTCATGTTTGCTACCGGAGAGGCTGTGTTGTACGAGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTACTTCTGATCTCATCGTaGAGGTTTCTGGGAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: EQCIWQSDTFAILAAKGVLLISS*RFLGNL Trigger: AAGGTTTCCCAGAAACCTCCACGATGAGATCAGAAG...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR TCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTACCACAGAGCACAGGTTaGGAACCACTTCTGGATTTG | + |
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Preference number: 2 (lower is better) Translates to: PFGTWQYRQTNRQFNVILPQSTG*EPLLDL Trigger: CAAATCCAGAAGTGGTTCTCAACCTGTGCTCTGTGG...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR TCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTAAACCACTTCTGGATTTaGATACATCTCAGTTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PFGTWQYRQTNRQFNVILNHFWI*IHLSLG Trigger: TCCCAAACTGAGATGTATTCAAATCCAGAAGTGGTT...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR-3UTR CCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTAAATCGAAATCTGTTTTaGAGAAAGTGTACTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: PFGTWQYRQTNRQFNVILNRNLF*RKCTDV Trigger: GACATCAGTACACTTTCTCCAAAACAGATTTCGATT...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR TCA 72 bp | CATCCTGGCATGGGAGCTACAGGAATCCACCGGGTGTaGTATCGGGAAGAGGCCGGGCTTCCGCCAGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: HPGMGATGIHRV*YREEAGLPPGD Trigger: ATCACCTGGCGGAAGCCCGGCCTCTTCCCGATATCACACCCGGTGGATTCCTGTAGCTCCCATGCCAGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| 3UTR CCA 72 bp | GCACCTGAAGCACCTCTCCATGAAAGAAGCGTTCTCTaGAGGAAGCTGGTCTGGGGTATAATAGACTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: APEAPLHERSVL*RKLVWGIIDCC Trigger: GCAGCAGTCTATTATACCCCAGACCAGCTTCCTCCAGAGAACGCTTCTTTCATGGAGAGGTGCTTCAGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR TCA 72 bp | GGGATTCTGCACAGTGAAGTATGTCTGCAGCATGGATaGACTGGTACCCCGATCCTCTTGTGCACAGCTCTA | + |
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Preference number: 3 (lower is better) Translates to: GILHSEVCLQHG*TGTPILLCTAL Trigger: TAGAGCTGTGCACAAGAGGATCGGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR GCA 72 bp | CATGCGGATGTGGGATTCTGCACAGTGAAGTATGTCTaGAGCATGGATGAACTGGTACCCCGATCCTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: HADVGFCTVKYV*SMDELVPRSSC Trigger: ACAAGAGGATCGGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CAA 90 bp | GTCTGCAGCATGGATGAACTGGTACCCCGATCCTCTTGTGCACAGCTCTACTTCAGAATAAGCTGCCCTTaGGCATCACAACCAATAGGT | + |
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Preference number: 3 (lower is better) Translates to: VCSMDELVPRSSCAQLYFRISCP*ASQPIG Trigger: ACCTATTGGTTGTGATGCCAAAGGGCAGCTTATTCT...GAAGTAGAGCTGTGCACAAGAGGATCGGGGTACCAGTTCATCCATGCTGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR TCA 72 bp | CCAGTCTTAATCATGCGGATGTGGGATTCTGCACAGTaGAGTATGTCTGCAGCATGGATGAACTGGTACCCC | + |
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Preference number: 3 (lower is better) Translates to: PVLIMRMWDSAQ*SMSAAWMNWYP Trigger: GGGGTACCAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATGATTAAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR CCA 72 bp | TTTGGTTCGAATTTCCAGGATGGAGGGTGGCTGAAGTaGAGTAGCTATTGCAAACAAAGCCAGTTGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: FGSNFQDGGWLK*SSYCKQSQLWR Trigger: CCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| 3UTR-3UTR CAA 90 bp | CCCACCTCCAGCGACTGTGTTTTGCAAGAAGCCGGAAAACTGTCATGCCACTTTCTGAAGATGAAGTTTTaGGTTCGAATTTCCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PTSSDCVLQEAGKLSCHFLKMKF*VRISRM Trigger: CATCCTGGAAATTCGAACCAAAAACTTCATCTTCAG...AAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTGGAGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR GCA 72 bp | GATGTAATCTGGTCTTCCATTTCTGTAAATCAAGCGTaGATTGGACTGGACCCACCTCCAGCGACTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DVIWSSISVNQA*IGLDPPPATVF Trigger: AAACACAGTCGCTGGAGGTGGGTCCAGTCCAATGCACGCTTGATTTACAGAAATGGAAGACCAGATTACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR CCA 72 bp | AATCTGGTCTTCCATTTCTGTAAATCAAGCGTGCATTaGACTGGACCCACCTCCAGCGACTGTGTTTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NLVFHFCKSSVH*TGPTSSDCVLQ Trigger: TTGCAAAACACAGTCGCTGGAGGTGGGTCCAGTCCAATGCACGCTTGATTTACAGAAATGGAAGACCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCAAACATGAAGGGCAGCGACGTACTTCGCTTCTGTAAATGCTCTCGTCCTTCCCTTGGAAATTCATaGCCAGAAAACCAGATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VANMKGSDVLRFCKCSRPSLGNS*PENQMN Trigger: ATTCATCTGGTTTTCTGGCAATGAATTTCCAAGGGA...AGGACGAGAGCATTTACAGAAGCGAAGTACGTCGCTGCCCTTCATGTTTGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR TCA 72 bp | GTCCTTCTTCATCCGTCAGTGGTCTCTGAGTGGCGATaGTGTAATCTGGTCTTCCATTTCTGTAAATCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLLHPSVVSEWR*CNLVFHFCKSS Trigger: GCTTGATTTACAGAAATGGAAGACCAGATTACATCATCGCCACTCAGAGACCACTGACGGATGAAGAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR GCA 72 bp | ACTTTCTCCAGTCTTAATCATGCGGATGTGGGATTCTaGACAGTGAAGTATGTCTGCAGCATGGATGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: TFSSLNHADVGF*TVKYVCSMDEL Trigger: CAGTTCATCCATGCTGCAGACATACTTCACTGTGCAGAATCCCACATCCGCATGATTAAGACTGGAGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR CCA 72 bp | GATGAAGTTTTTGGTTCGAATTTCCAGGATGGAGGGTaGCTGAAGTGGAGTAGCTATTGCAAACAAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DEVFGSNFQDGG*LKWSSYCKQSQ Trigger: CTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAACCAAAAACTTCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR TCA 72 bp | AAGTTTTTGGTTCGAATTTCCAGGATGGAGGGTGGCTaGAGTGGAGTAGCTATTGCAAACAAAGCCAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KFLVRISRMEGG*SGVAIANKASC Trigger: ACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAACCAAAAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| 3UTR TCA 72 bp | TCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTaGCACATTTGCCATATTGGCAGCAAAGGGTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: SLSRLRTVHLAE*HICHIGSKGCI Trigger: GATACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| 3UTR TCA 72 bp | TCAACATTTCAGTGGATCTCAACCTTTCTAATGCTGTaGCCCTTGAATACAGTTGCTCAGGACCCCAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: STFQWISTFLML*PLNTVAQDPNH Trigger: ATGGTTGGGGTCCTGAGCAACTGTATTCAAGGGTCACAGCATTAGAAAGGTTGAGATCCACTGAAATGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| 3UTR TCA 72 bp | ACACAAGAATCGAAATCTGTTTTGGAGAAAGTGTACTaGTGTCCAACCCTCACAGTTCTGGTATCCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TQESKSVLEKVY*CPTLTVLVSCS Trigger: GGAACAGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATTTCGATTCTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| 3UTR CCA 72 bp | AACAGTGCATTTGGCAGAGTGACACATTTGCCATATTaGCAGCAAAGGGTGTATCACATAAACAACTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: NSAFGRVTHLPY*QQRVYHINNLR Trigger: CCTTAAGTTGTTTATGTGATACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCTTTTCTGCACCGGCTTaGGCCGCTTGCGGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTFSAPA*AACGWH Trigger: ATGCCAGCCGCAAGCGGCGCAAGCCGGTGCAGAAAA...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCATAGACTGCTGCCTGTaGAGGGCCATGGGCTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTIDCCL*RAMGFV Trigger: GACGAAGCCCATGGCCCTCCACAGGCAGCAGTCTAT...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | GACGTACTTCGCTTCTGTAAATGCTCTCGTCCTTCTTCATCCGTCAGTGGTCTCTTTTCTGCACCGGCTTaGGCCGCTTGCGGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DVLRFCKCSRPSSSVSGLFSAPA*AACGWH Trigger: ATGCCAGCCGCAAGCGGCGCAAGCCGGTGCAGAAAA...GAGACCACTGACGGATGAAGAAGGACGAGAGCATTTACAGAAGCGAAGTACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCGCTCTACACTGGTCCTaGCCTCCATTTCTGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTALHWS*PPFLSA Trigger: TGCTGACAGAAATGGAGGCCAGGACCAGTGTAGAGC...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAATCTGGTCCACAGGGGTaGGCTGTGGCCCTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKSGPQG*AVALAG Trigger: GCCAGCCAGGGCCACAGCGCACCCCTGTGGACCAGA...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| 3UTR CAA 72 bp | GTGCATTGGACTGGACCCACCTCCAGCGACTGTGTTTaGCAAGAAGCCGGAAAACTGTCATGCCACTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHWTGPTSSDCV*QEAGKLSCHFL Trigger: GAGAAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTGGAGGTGGGTCCAGTCCAATGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCCCAACTGCACACTCTTaGAATGTTCTGGAAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTPTAHS*NVLEAE Trigger: CTCTGCTTCCAGAACATTCCAAGAGTGTGCAGTTGG...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCAAGGATGGAGGGTGGCTaGAGTGGAGTAGCTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVVDIGTFSTFYGGLLISRMEGG*SGVAIA Trigger: TGCAATAGCTACTCCACTTCAGCCACCCTCCATCCT...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCTTATTAATAACATCTTaGGGGAAGGGCAGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTLLITS*GKGSRL Trigger: CAGCCTGCTGCCCTTCCCGCAAGATGTTATTAATAA...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | GAGATCTCGTACAACACAGCCTCTCCGGTAGCAAACATGAAGGGCAGCGACGTAGAAGACCAAGGCATCTaGTGTGACAACCAGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EISYNTASPVANMKGSDVEDQGI*CDNQHK Trigger: TTTGTGCTGGTTGTCACAGCAGATGCCTTGGTCTTC...TACGTCGCTGCCCTTCATGTTTGCTACCGGAGAGGCTGTGTTGTACGAGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCCCTTCTTGCAAATCCTaGCAGTCTCTGATTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTPSCKS*QSLICA Trigger: AGCACAAATCAGAGACTGGCAGGATTTGCAAGAAGG...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCAAAATCAAGCGTGCATTaGACTGGACCCACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVVDIGTFSTFYGGLLISKSSVH*TGPTSS Trigger: GCTGGAGGTGGGTCCAGTCCAATGCACGCTTGATTT...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAACACAGGGGTGCGCTGTaGCCCTGGCTGGCACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKHRGAL*PWLALI Trigger: TATCAGTGCCAGCCAGGGCCACAGCGCACCCCTGTG...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| 3UTR CAA 72 bp | TGGCTGAAGTGGAGTAGCTATTGCAAACAAAGCCAGTaGTGGAGGAAGCAGCGCTCCGTCCTTCCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLKWSSYCKQSQ*WRKQRSVLPFL Trigger: AAGAAAGGGAAGGACGGAGCGCTGCTTCCTCCACAACTGGCTTTGTTTGCAATAGCTACTCCACTTCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATATCCGGAAAGAGCTCTaGGGGGCCGCCAGAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFKPFENSAFGRVTHLPYIRKEL*GAAREC Trigger: GCACTCTCTGGCGGCCCCTCAGAGCTCTTTCCGGAT...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCGACGTACTTCGCTTCTGTAAATGCTCTCGTCCTTCTTCATCCGTCAGTGTCGCTTAGAAGGATTTaGCTTAATTCCTTCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AATYFASVNALVLLHPSVSLRRI*LNSFSG Trigger: CCCGCTGAAGGAATTAAGTCAAATCCTTCTAAGCGA...CACTGACGGATGAAGAAGGACGAGAGCATTTACAGAAGCGAAGTACGTCGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR TCA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCAATACGCTCTGATGGATaGCATCAGACTGCTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVVDIGTFSTFYGGLLISIRSDG*HQTAES Trigger: GCTTTCAGCAGTCTGATGTCATCCATCAGAGCGTAT...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCAAGCTCATATACGCTCTaGTGGATGACATCAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVVDIGTFSTFYGGLLISSSYTL*WMTSDC Trigger: GCAGTCTGATGTCATCCATCAGAGCGTATATGAGCT...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCCGTTCTGCATGCTTCTaGTATCTTCAAAATCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTRSACF*YLQNQS Trigger: GGATTGATTTTGAAGATATCAGAAGCATGCAGAACG...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCTGTGAGTTTATCCCATaGCTTTGGTTTTCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CERVSLSPTGATEHRLRTCEFIP*LWFSGT Trigger: AGTTCCTGAAAACCAAAGTCATGGGATAAACTCACA...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAGCTGGCACTGATACATaGACATGGCCCCAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVAGTDT*TWPQHS Trigger: ACTATGCTGGGGCCATGTCCATGTATCAGTGCCAGC...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATGGTGCGCTGTGGCCCTaGCTGGCACTGATACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFKPFENSAFGRVTHLPYGALWP*LALIHG Trigger: TCCATGTATCAGTGCCAGCCAGGGCCACAGCGCACC...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTATGGGGGCACACCATCTaGCACAGCTGCTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFGTWQYRQTNRQFNVILWGHTI*HSCCWG Trigger: GCCCCAGCAGCAGCTGTGTCAGATGGTGTGCCCCCA...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTATTCCAGGATGGAGGGTaGCTGAAGTGGAGTAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVFQDGG*LKWSSY Trigger: ATAGCTACTCCACTTCAGCCACCCTCCATCCTGGAA...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAAATCCTTACTTGGGGTTaGCTGGGGAGCCCAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKILTWG*LGSPVF Trigger: AAAGACTGGGCTCCCCAGTCAACCCCAAGTAAGGAT...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTATGCGGCGGGGGCTGCTaGAGCTGTTGCTGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFGTWQYRQTNRQFNVILCGGGC*SCCCCS Trigger: AGAGCAACAGCAACAGCTTCAGCAGCCCCCGCCGCA...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | CCTGAAGATGAAGTTTTTGGTTCGAATTTCCAGGATGGAGGGTGGCTGAAGTGGTTATTAATAACATCTTaGGGGAAGGGCAGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEDEVFGSNFQDGGWLKWLLITS*GKGSRL Trigger: CAGCCTGCTGCCCTTCCCGCAAGATGTTATTAATAA...CCACTTCAGCCACCCTCCATCCTGGAAATTCGAACCAAAAACTTCATCTTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR GCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTACCAGCGACTGTGTTTTaGAAGAAGCCGGAAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVPATVF*KKPENC Trigger: ACAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTGG...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTATTTCAGAGCTGTACTaGGTCTGGTCCACAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPISELY*VWSTGV Trigger: CACCCCTGTGGACCAGACGCAGTACAGCTCTGAAAT...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAATTTGTGCTCTACACTaGTCCTGGCCTCCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVICALH*SWPPFL Trigger: CAGAAATGGAGGCCAGGACCAGTGTAGAGCACAAAT...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTGAAAGAAGCGTTCTCTaGAGGAAGCTGGTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPERSVL*RKLVWG Trigger: ACCCCAGACCAGCTTCCTCCAGAGAACGCTTCTTTC...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTACACACTGTCCACCTCTaGTTTGTAGGGAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVHTVHL*FVGKFL Trigger: CAGGAATTTCCCTACAAACCAGAGGTGGACAGTGTG...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAACTGATACATGGACATaGCCCCAGCATAGTATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVTDTWT*PQHSMP Trigger: AGGCATACTATGCTGGGGCCATGTCCATGTATCAGT...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | GTGAAGTCTAGCTTGTGTTTGGTCCTGAAGATGAAGTTTTTGGTTCGAATTTCCCCAAGGCATCTGCTGTaGCAACCAGCACAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKSSLCLVLKMKFLVRISPRHLL*QPAQSH Trigger: ATGGCTTTGTGCTGGTTGTCACAGCAGATGCCTTGG...GGAAATTCGAACCAAAAACTTCATCTTCAGGACCAAACACAAGCTAGACTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR TCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAATGCTCACGGAGCCCATaGGAAAATGGCTGTCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKCSRSP*ENGCLT Trigger: TGTTAGACAGCCATTTTCTCATGGGCTCCGTGAGCA...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTATTATGTCGATGTCTTTaGAGTCAACCTCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVLCRCL*SQPHQQ Trigger: CTGCTGGTGAGGTTGACTTCAAAGACATCGACATAA...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATGAGCCCATGAGAAAATaGCTGTCTAACAGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFKPFENSAFGRVTHLPYEPMRK*LSNSAG Trigger: CCCTGCGCTGTTAGACAGCCATTTTCTCATGGGCTC...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTTGCCAGAAAACCAGATaGATTATCCAGCAGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPCQKTR*IIQQAP Trigger: AGGTGCCTGCTGGATAATTCATCTGGTTTTCTGGCA...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTGTCTCTGAGTGGCGATaGTGTAATCTGGTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPVSEWR*CNLVFH Trigger: ATGGAAGACCAGATTACATCATCGCCACTCAGAGAC...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTCCAGGGAAGTCCAACTaGACACTCTTGGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPPGKSN*TLLECS Trigger: AGAACATTCCAAGAGTGTGCAGTTGGACTTCCCTGG...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAAGGAGGGTGGCTGAAGTaGAGTAGCTATTGCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKGGWLK*SSYCKQ Trigger: TTGTTTGCAATAGCTACTCCACTTCAGCCACCCTCC...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTAAAGCGTGCATTGGACTaGACCCACCTCCAGCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PFGTWQYRQTNRQFNVILKRALD*THLQRL Trigger: CAGTCGCTGGAGGTGGGTCCAGTCCAATGCACGCTT...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAACTCTTGGAATGTTCTaGAAGCAGAGGCTGATTACA | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAILAAKGVTLGMF*KQRLIT Trigger: TGTAATCAGCCTCTGCTTCCAGAACATTCCAAGAGT...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| 3UTR CAA 72 bp | CCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTaGCCATATTGGCAGCAAAGGGTGTATCACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFENSAFGRVTH*PYWQQRVYHIN Trigger: GTTTATGTGATACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAAAAGAACTCTCCTTCTTaGAAATCCTGCCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKKNSPS*KSCQSL Trigger: CAGAGACTGGCAGGATTTGCAAGAAGGAGAGTTCTT...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTCTGTAAATCAAGCGTaGATTGGACTGGACCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FFKPFENSAFGRVTHLPYSVNQA*IGLDPP Trigger: AGGTGGGTCCAGTCCAATGCACGCTTGATTTACAGA...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAATTAGAAGTAGTGGGATaGAGGGACGGTTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKLEVVG*RDGSKS Trigger: GGATTTTGAACCGTCCCTGCATCCCACTACTTCTAA...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGCTTTAGTTCCTGCTaGGGACAGTTGAAAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: FFKPFENSAFGRVTHLPYCFSSC*GQLKDT Trigger: CGTGTCTTTCAACTGTCCCCAGCAGGAACTAAAGCA...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTCGCTTAGAAGGATTTaGCTTAATTCCTTCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFKPFENSAFGRVTHLPYSLRRI*LNSFSG Trigger: CCCGCTGAAGGAATTAAGTCAAATCCTTCTAAGCGA...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTACCAAGGCATCTGCTGTaGCAACCAGCACAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFGTWQYRQTNRQFNVILPRHLL*QPAQSH Trigger: ATGGCTTTGTGCTGGTTGTCACAGCAGATGCCTTGG...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATCGAGTTCAGCAAAGTTaGATTGTTCAGGGAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFKPFENSAFGRVTHLPYRVQQS*IVQGIL Trigger: CAGGATTCCCTGAACAATTCAACTTTGCTGAACTCG...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR GCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTACCAGTCTCTGATTTGTaGTCTACACTGGTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFGTWQYRQTNRQFNVILPVSDL*STLVLA Trigger: GGCCAGGACCAGTGTAGAGCACAAATCAGAGACTGG...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTATAAGAGAACTGGGGTaGAAAGAATCCTTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPIRELG*KESLLG Trigger: CCCAAGTAAGGATTCTTTCCACCCCAGTTCTCTTAT...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| 3UTR CAA 72 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATaGGCAGCAAAGGGTGTATCACATAAACAACTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQCIWQSDTFAI*AAKGVSHKQLK Trigger: CTTAAGTTGTTTATGTGATACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR TCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTATCTGGAAGCAGAGGCTaGTTACAGGGAGCAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFGTWQYRQTNRQFNVILSGSRG*LQGAKF Trigger: GAACTTTGCTCCCTGTAATCAGCCTCTGCTTCCAGA...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTATTCGAATTTCCAGGATaGAGGGTGGCTGAAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFGTWQYRQTNRQFNVILFEFPG*RVAEVE Trigger: CTCCACTTCAGCCACCCTCCATCCTGGAAATTCGAA...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CCA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAATACTTTAACCTCCCTTaGAAATTCATTGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKYFNLP*KFIARK Trigger: TTTTCTGGCAATGAATTTCCAAGGGAGGTTAAAGTA...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS GCA 90 bp | GAGAACCTGGAATTTCAGAGCTGTACTGCGTCTGGTCCACAGGGGTaGGCTGTGGCCCTGGCTGGCACTGATACATGGACATGGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ENLEFQSCTASGPQG*AVALAGTDTWTWPQ Trigger: CTGGGGCCATGTCCATGTATCAGTGCCAGCCAGGGCCACAGCGCACCCCTGTGGACCAGACGCAGTACAGCTCTGAAATTCCAGGTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS CCA 90 bp | TTCAGAGCTGTACTGCGTCTGGTCCACAGGGGTGCGCTGTGGCCCTaGCTGGCACTGATACATGGACATGGCCCCAGCATAGTATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRAVLRLVHRGALWP*LALIHGHGPSIVCL Trigger: CAGGCATACTATGCTGGGGCCATGTCCATGTATCAGTGCCAGCCAGGGCCACAGCGCACCCCTGTGGACCAGACGCAGTACAGCTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS GCA 90 bp | CTGAGCATGGCCAATTTGCTCATGTTTCAGCGCAGCCTCACTTCCTaGGGCCGCAAAGCTGTCTTGCCAACTCCCGCACTTGCTCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSMANLLMFQRSLTS*GRKAVLPTPALAHG Trigger: TCCGTGAGCAAGTGCGGGAGTTGGCAAGACAGCTTTGCGGCCGCAGGAAGTGAGGCTGCGCTGAAACATGAGCAAATTGGCCATGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS CCA 90 bp | TGGAATTTCAGAGCTGTACTGCGTCTGGTCCACAGGGGTGCGCTGTaGCCCTGGCTGGCACTGATACATGGACATGGCCCCAGCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WNFRAVLRLVHRGAL*PWLALIHGHGPSIV Trigger: TACTATGCTGGGGCCATGTCCATGTATCAGTGCCAGCCAGGGCCACAGCGCACCCCTGTGGACCAGACGCAGTACAGCTCTGAAATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | GCAAACATGAAGGGCAGCGACGTACTTCGCTTCTGTAAATGCTCTCGTCCTTCTGTTTTCTGCACCGGCTaGCGCCGCTTGCGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ANMKGSDVLRFCKCSRPSVFCTG*RRLRLA Trigger: TGCCAGCCGCAAGCGGCGCAAGCCGGTGCAGAAAAC...AGAAGGACGAGAGCATTTACAGAAGCGAAGTACGTCGCTGCCCTTCATGTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| CDS-3UTR CAA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCGGTACCCCGATCCTCTaGTGCACAGCTCTACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CERVSLSPTGATEHRLRTGTPIL*CTALLL Trigger: CAGAAGTAGAGCTGTGCACAAGAGGATCGGGGTACC...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS TCA 90 bp | TGTTGCTCTAGTTGCAGGCGCTCCTGCAGCATACAGCTTAGGTGCTaGGTCACAGGCTGCTGCTGGCAAGCCGAGTTCAGCAAAGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CCSSCRRSCSIQLRC*VTGCCWQAEFSKVE Trigger: TTCAACTTTGCTGAACTCGGCTTGCCAGCAGCAGCCTGTGACTCAGCACCTAAGCTGTATGCTGCAGGAGCGCCTGCAACTAGAGCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAGTTTTCTGCACCGGCTaGCGCCGCTTGCGGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EQCIWQSDTFAILAAKGVVFCTG*RRLRLA Trigger: TGCCAGCCGCAAGCGGCGCAAGCCGGTGCAGAAAAC...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 90 bp | GCGCCTGTAACAAGAACTCTCCTTCTTGCAAATCCTGCCAGTCTCTaGTTTGTGCTCTACACTGGTCCTGGCCTCCATTTCTGTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: APVTRTLLLANPASL*FVLYTGPGLHFCQQ Trigger: CTGCTGACAGAAATGGAGGCCAGGACCAGTGTAGAGCACAAATCAGAGACTGGCAGGATTTGCAAGAAGGAGAGTTCTTGTTACAGGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 90 bp | GGCACTGATACATGGACATGGCCCCAGCATAGTATGCCTGAGGACTaGCCATGGCGGACTGTGAGTTTATCCCATGACTTTGGTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTDTWTWPQHSMPED*PWRTVSLSHDFGFQ Trigger: CTGAAAACCAAAGTCATGGGATAAACTCACAGTCCGCCATGGTCAGTCCTCAGGCATACTATGCTGGGGCCATGTCCATGTATCAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | TGTGAAAGGGTCAGTCTATCTCCCACGGGAGCCACAGAGCACAGGTTGAGAACCCCGAGTTCAGCAAAGTaGAATTGTTCAGGGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CERVSLSPTGATEHRLRTPSSAK*NCSGNP Trigger: AGGATTCCCTGAACAATTCAACTTTGCTGAACTCGG...GGTTCTCAACCTGTGCTCTGTGGCTCCCGTGGGAGATAGACTGACCCTTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCAGCGACTGTGTTTTGCAAGAAGCCGGAAAACTGTCATGCCACTTTCTCCCTTATTAATAACATCTaGCGGGAAGGGCAGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPATVFCKKPENCHATFSLINNI*REGQQA Trigger: AGCCTGCTGCCCTTCCCGCAAGATGTTATTAATAAG...GGAGAAAGTGGCATGACAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR CAA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTTCCTGCTGGGGACAGTaGAAAGACACGGGAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPSCWGQ*KDTGGV Trigger: CACCCCTCCCGTGTCTTTCAACTGTCCCCAGCAGGA...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS GCA 90 bp | CAGGTAATCTTGGATAGTGGAGGAAGCATAGAAGACCAAGGCATCTaGTGTGACAACCAGCACAAAGCCATTCAGCGCCATCAAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QVILDSGGSIEDQGI*CDNQHKAIQRHQRS Trigger: GCTTCTTTGATGGCGCTGAATGGCTTTGTGCTGGTTGTCACAGCAGATGCCTTGGTCTTCTATGCTTCCTCCACTATCCAAGATTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| CDS GCA 90 bp | AAGCCATTCAGCGCCTGTAACAAGAACTCTCCTTCTTGCAAATCCTaGCAGTCTCTGATTTGTGCTCTACACTGGTCCTGGCCTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: KPFSACNKNSPSCKS*QSLICALHWSWPPF Trigger: AAATGGAGGCCAGGACCAGTGTAGAGCACAAATCAGAGACTGGCAGGATTTGCAAGAAGGAGAGTTCTTGTTACAGGCGCTGAATGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCACTTATTAATAACATCTaGCGGGAAGGGCAGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVVDIGTFSTFYGGLLISLINNI*REGQQA Trigger: AGCCTGCTGCCCTTCCCGCAAGATGTTATTAATAAG...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAAGCCGTTTGAGAACAGTGCATTTGGCAGAGTGACACATTTGCCATATCTTCGGACCCAGATCTaGCTGGGGGCACACCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: FFKPFENSAFGRVTHLPYLRTQI*LGAHHL Trigger: CAGATGGTGTGCCCCCAGCAAGATCTGGGTCCGAAG...ATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTCTCAAACGGCTTAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCATCCAACTGCACACTCTaGGAATGTTCTGGAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVVDIGTFSTFYGGLLISSNCTL*ECSGSR Trigger: TCTGCTTCCAGAACATTCCAAGAGTGTGCAGTTGGA...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | ATGCTCTCGTCCTTCTTCATCCGTCAGTGGTCTCTGAGTGGCGATGATGTAATCAAAGCCCAGGTAATCTaGGATAGTGGAGGAAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: MLSSFFIRQWSLSGDDVIKAQVI*DSGGSI Trigger: TATGCTTCCTCCACTATCCAAGATTACCTGGGCTTT...GATTACATCATCGCCACTCAGAGACCACTGACGGATGAAGAAGGACGAGAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
||
| CDS-3UTR CAA 90 bp | AGCGTAGTGGACATAGGCACCTTTAGCACTTTCTACGGTGGCCTTCTGATCTCAAGAATAAGCTGCCCTTaGGCATCACAACCAATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVVDIGTFSTFYGGLLISRISCP*ASQPIG Trigger: ACCTATTGGTTGTGATGCCAAAGGGCAGCTTATTCT...TGAGATCAGAAGGCCACCGTAGAAAGTGCTAAAGGTGCCTATGTCCACTACGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTCTAACAGCGCAGGGCTaGAAGGAGGACACAGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPLTAQG*KEDTDR Trigger: TCTATCTGTGTCCTCCTTCAAGCCCTGCGCTGTTAG...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTCTGAGCATGGCCAATTaGCTCATGTTTCAGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPLSMAN*LMFQRS Trigger: GCTGCGCTGAAACATGAGCAAATTGGCCATGCTCAG...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTAGTTATGTCGATGTCTTaGAAGTCAACCTCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EQCIWQSDTFAILAAKGVVMSMS*KSTSPA Trigger: TGCTGGTGAGGTTGACTTCAAAGACATCGACATAAC...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
||
| CDS-3UTR CAA 90 bp | GATACTAATTCAGACCACCAGTCTAAATCCTTGGTGACACCTCATGCTGGAAAATGCTTTTGGTGCGTATaGGTAGGGGATCCATTATGG | + |
|
Preference number: 5 (lower is better) Translates to: DTNSDHQSKSLVTPHAGKCFWCV*VGDPLW Trigger: CCATAATGGATCCCCTACCAATACGCACCAAAAGCA...TTTTCCAGCATGAGGTGTCACCAAGGATTTAGACTGGTGGTCTGAATTAGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | GAACAGTGCATTTGGCAGAGTGACACATTTGCCATATTGGCAGCAAAGGGTGTATCCCTTGGAAATTCATaGCCAGAAAACCAGATGAAT | + |
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Preference number: 5 (lower is better) Translates to: EQCIWQSDTFAILAAKGVSLGNS*PENQMN Trigger: ATTCATCTGGTTTTCTGGCAATGAATTTCCAAGGGA...TACACCCTTTGCTGCCAATATGGCAAATGTGTCACTCTGCCAAATGCACTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | AATCTGTTTTGGAGAAAGTGTACTGATGTCCAACCCTCACAGTTCTGGTATCCTTCTTTCCTGCTAGTGTaGCTTTTGGTGCGTATTGGT | + |
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Preference number: 5 (lower is better) Translates to: NLFWRKCTDVQPSQFWYPSFLLV*LLVRIG Trigger: ACCAATACGCACCAAAAGCAACACTAGCAGGAAAGA...AGGATACCAGAACTGTGAGGGTTGGACATCAGTACACTTTCTCCAAAACAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTATCCAGCGACTGTGTTTaGCAAGAAGCCGGAAAACTG | + |
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Preference number: 5 (lower is better) Translates to: PFGTWQYRQTNRQFNVILSSDCV*QEAGKL Trigger: CAGTTTTCCGGCTTCTTGCAAAACACAGTCGCTGGA...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTACAAGAACTCTCCTTCTaGCAAATCCTGCCAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PFGTWQYRQTNRQFNVILQELSF*QILPVS Trigger: AGAGACTGGCAGGATTTGCAAGAAGGAGAGTTCTTG...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTAGGTGTGAAGTCTAGCTaGTGTTTGGTCCTGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: PFGTWQYRQTNRQFNVILGVKSS*CLVLKM Trigger: CATCTTCAGGACCAAACACAAGCTAGACTTCACACC...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTATTCAGCAAAGTTGAATaGTTCAGGGAATCCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: PFGTWQYRQTNRQFNVILFSKVE*FRESCT Trigger: CGTGCAGGATTCCCTGAACAATTCAACTTTGCTGAA...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS-3UTR CAA 90 bp | CCATTTGGCACTTGGCAATACAGACAAACAAATAGGCAGTTTAATGTGATTTTACTGAAGATGAAGTTTTaGGTTCGAATTTCCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: PFGTWQYRQTNRQFNVILLKMKF*VRISRM Trigger: CATCCTGGAAATTCGAACCAAAAACTTCATCTTCAG...TAAAATCACATTAAACTGCCTATTTGTTTGTCTGTATTGCCAAGTGCCAAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 72 bp | CAGCGCAGCCTCACTTCCTGCGGCCGCAAAGCTGTCTaGCCAACTCCCGCACTTGCTCACGGAGCCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: QRSLTSCGRKAV*PTPALAHGAHE Trigger: CTCATGGGCTCCGTGAGCAAGTGCGGGAGTTGGCAAGACAGCTTTGCGGCCGCAGGAAGTGAGGCTGCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS GCA 72 bp | AGCGCAGCCTCACTTCCTGCGGCCGCAAAGCTGTCTTaGCAACTCCCGCACTTGCTCACGGAGCCCATGAGA | + |
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Preference number: 6 (lower is better) Translates to: SAASLPAAAKLS*QLPHLLTEPMR Trigger: TCTCATGGGCTCCGTGAGCAAGTGCGGGAGTTGGCAAGACAGCTTTGCGGCCGCAGGAAGTGAGGCTGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CCA 72 bp | GTACTGCGTCTGGTCCACAGGGGTGCGCTGTGGCCCTaGCTGGCACTGATACATGGACATGGCCCCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: VLRLVHRGALWP*LALIHGHGPSI Trigger: TATGCTGGGGCCATGTCCATGTATCAGTGCCAGCCAGGGCCACAGCGCACCCCTGTGGACCAGACGCAGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 90 bp | GCCTCACTTCCTGCGGCCGCAAAGCTGTCTTGCCAACTCCCGCACTaGCTCACGGAGCCCATGAGAAAATGGCTGTCTAACAGCGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: ASLPAAAKLSCQLPH*LTEPMRKWLSNSAG Trigger: CCCTGCGCTGTTAGACAGCCATTTTCTCATGGGCTCCGTGAGCAAGTGCGGGAGTTGGCAAGACAGCTTTGCGGCCGCAGGAAGTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 90 bp | GGGGCCGCCAGAGAGTGCAAGGTTCACGTCCTGAGCATGGCCAATTaGCTCATGTTTCAGCGCAGCCTCACTTCCTGCGGCCGCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GAARECKVHVLSMAN*LMFQRSLTSCGRKA Trigger: AGCTTTGCGGCCGCAGGAAGTGAGGCTGCGCTGAAACATGAGCAAATTGGCCATGCTCAGGACGTGAACCTTGCACTCTCTGGCGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 72 bp | AGTTGCAGGCGCTCCTGCAGCATACAGCTTAGGTGCTaGGTCACAGGCTGCTGCTGGCAAGCCGAGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SCRRSCSIQLRC*VTGCCWQAEFS Trigger: GCTGAACTCGGCTTGCCAGCAGCAGCCTGTGACTCAGCACCTAAGCTGTATGCTGCAGGAGCGCCTGCAACT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 72 bp | CGTGCCGTTGATTTGCGTGTGCTTCGGACCCAGATCTaGCTGGGGGCACACCATCTGACACAGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RAVDLRVLRTQI*LGAHHLTQLLL Trigger: CAGCAGCAGCTGTGTCAGATGGTGTGCCCCCAGCAAGATCTGGGTCCGAAGCACACGCAAATCAACGGCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 72 bp | TCTGAGGGGCCGCCAGAGAGTGCAAGGTTCACGTCCTaGGCATGGCCAATTTGCTCATGTTTCAGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SEGPPESARFTS*AWPICSCFSAA Trigger: GGCTGCGCTGAAACATGAGCAAATTGGCCATGCTCAGGACGTGAACCTTGCACTCTCTGGCGGCCCCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 72 bp | CCTGCGGCCGCAAAGCTGTCTTGCCAACTCCCGCACTaGCTCACGGAGCCCATGAGAAAATGGCTGTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: PAAAKLSCQLPH*LTEPMRKWLSN Trigger: GTTAGACAGCCATTTTCTCATGGGCTCCGTGAGCAAGTGCGGGAGTTGGCAAGACAGCTTTGCGGCCGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CCA 72 bp | CAACTCCCGCACTTGCTCACGGAGCCCATGAGAAAATaGCTGTCTAACAGCGCAGGGCTTGAAGGAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: QLPHLLTEPMRK*LSNSAGLEGGH Trigger: GTGTCCTCCTTCAAGCCCTGCGCTGTTAGACAGCCATTTTCTCATGGGCTCCGTGAGCAAGTGCGGGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 72 bp | TGTCTTGCCAACTCCCGCACTTGCTCACGGAGCCCATaGGAAAATGGCTGTCTAACAGCGCAGGGCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: CLANSRTCSRSP*ENGCLTAQGLK Trigger: CTTCAAGCCCTGCGCTGTTAGACAGCCATTTTCTCATGGGCTCCGTGAGCAAGTGCGGGAGTTGGCAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 72 bp | AGAGAGTGCAAGGTTCACGTCCTGAGCATGGCCAATTaGCTCATGTTTCAGCGCAGCCTCACTTCCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RECKVHVLSMAN*LMFQRSLTSCG Trigger: GCCGCAGGAAGTGAGGCTGCGCTGAAACATGAGCAAATTGGCCATGCTCAGGACGTGAACCTTGCACTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 90 bp | GGTGCTGAGTCACAGGCTGCTGCTGGCAAGCCGAGTTCAGCAAAGTaGAATTGTTCAGGGAATCCTGCACGTAGGTCAGGATTTCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: GAESQAAAGKPSSAK*NCSGNPARRSGFRP Trigger: CGGACGAAATCCTGACCTACGTGCAGGATTCCCTGAACAATTCAACTTTGCTGAACTCGGCTTGCCAGCAGCAGCCTGTGACTCAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 72 bp | GACTGGGGAGCCCAGTCTTTCCTGCTAGTGTTGCTTTaGGTGCGTATTGGTAGGGGATCCATTATGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: DWGAQSFLLVLL*VRIGRGSIMGE Trigger: CTCTCCCATAATGGATCCCCTACCAATACGCACCAAAAGCAACACTAGCAGGAAAGACTGGGCTCCCCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 72 bp | CGTAGGTCAGGATTTCGTCCGTTATGTCGATGTCTTTaGAGTCAACCTCACCAGCAGCGGTGGAGTCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RRSGFRPLCRCL*SQPHQQRWSQF Trigger: GAACTGACTCCACCGCTGCTGGTGAGGTTGACTTCAAAGACATCGACATAACGGACGAAATCCTGACCTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 72 bp | ACATGGACATGGCCCCAGCATAGTATGCCTGAGGACTaGCCATGGCGGACTGTGAGTTTATCCCATGACTTT | + |
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Preference number: 6 (lower is better) Translates to: TWTWPQHSMPED*PWRTVSLSHDF Trigger: AAAGTCATGGGATAAACTCACAGTCCGCCATGGTCAGTCCTCAGGCATACTATGCTGGGGCCATGTCCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS GCA 72 bp | TTGGATAGTGGAGGAAGCATAGAAGACCAAGGCATCTaGTGTGACAACCAGCACAAAGCCATTCAGCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LDSGGSIEDQGI*CDNQHKAIQRL Trigger: CAGGCGCTGAATGGCTTTGTGCTGGTTGTCACAGCAGATGCCTTGGTCTTCTATGCTTCCTCCACTATCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS GCA 72 bp | TTGGATAGTGGAGGAAGCATAGAAGACCAAGGCATCTaGTGTGACAACCAGCACAAAGCCATTCAGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LDSGGSIEDQGI*CDNQHKAIQRH Trigger: ATGGCGCTGAATGGCTTTGTGCTGGTTGTCACAGCAGATGCCTTGGTCTTCTATGCTTCCTCCACTATCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110811.3 |
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| CDS CAA 90 bp | TACGCTCTGATGGATGACATCAGACTGCTGAAAGCCCAGGTAATCTaGGATAGTGGAGGAAGCATAGAAGACCAAGGCATCTGCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: YALMDDIRLLKAQVI*DSGGSIEDQGICCD Trigger: GTCACAGCAGATGCCTTGGTCTTCTATGCTTCCTCCACTATCCAAGATTACCTGGGCTTTCAGCAGTCTGATGTCATCCATCAGAGCGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 72 bp | TGTGTTCAGCCGGTCTCTGTGTCGCTTAGAAGGATTTaGCTTAATTCCTTCAGCGGGGATGGGCTTTACTGT | + |
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Preference number: 6 (lower is better) Translates to: CVQPVSVSLRRI*LNSFSGDGLYC Trigger: ACAGTAAAGCCCATCCCCGCTGAAGGAATTAAGTCAAATCCTTCTAAGCGACACAGAGACCGGCTGAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110811.3 ENSMUST00000116436.9 |
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| CDS TCA 72 bp | ACAAGAACTCTCCTTCTTGCAAATCCTGCCAGTCTCTaGTTTGTGCTCTACACTGGTCCTGGCCTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: TRTLLLANPASL*FVLYTGPGLHF Trigger: GAAATGGAGGCCAGGACCAGTGTAGAGCACAAATCAGAGACTGGCAGGATTTGCAAGAAGGAGAGTTCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS TCA 72 bp | AGCATAGTATGCCTGAGGACTGACCATGGCGGACTGTaGGTTTATCCCATGACTTTGGTTTTCAGGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SIVCLRTDHGGL*VYPMTLVFRNL Trigger: CAAGTTCCTGAAAACCAAAGTCATGGGATAAACTCACAGTCCGCCATGGTCAGTCCTCAGGCATACTATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS GCA 72 bp | AAGCCATTCAGCGCCTGTAACAAGAACTCTCCTTCTTaGAAATCCTGCCAGTCTCTGATTTGTGCTCTACAC | + |
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Preference number: 6 (lower is better) Translates to: KPFSACNKNSPS*KSCQSLICALH Trigger: GTGTAGAGCACAAATCAGAGACTGGCAGGATTTGCAAGAAGGAGAGTTCTTGTTACAGGCGCTGAATGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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| CDS CAA 72 bp | ATGGATGACATCAGACTGCTGAAAGCCCAGGTAATCTaGGATAGTGGAGGAAGCATAGAAGACCAAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: MDDIRLLKAQVI*DSGGSIEDQGI Trigger: GATGCCTTGGTCTTCTATGCTTCCTCCACTATCCAAGATTACCTGGGCTTTCAGCAGTCTGATGTCATCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116436.9 |
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