Pregenerated sensors for AHCY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027597Ensembl transcript IDs: ENSMUST00000054607.16
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGCCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTaGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAACCAATGGATC | + |
Preference number: 1 (lower is better) Translates to: GPALGGLQTPGVPAL*WSSFLGPGLRNQWI Trigger: GATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CCA 90 bp | CCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTaGAGCTCGTTCTTGGGTCCTGGACTGAGAAACCAATGGATCTGC | + |
Preference number: 1 (lower is better) Translates to: PALGGLQTPGVPALW*SSFLGPGLRNQWIC Trigger: GCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CCA 90 bp | AAAGACAGAGTGACCAGCCCCAGAGGGTGTAAGGGGAGGGCTGTGTaGGAGAAGCACTGTCCAGGCTACTGCAAAGTTGGTGACATTTGC | + |
Preference number: 1 (lower is better) Translates to: KDRVTSPRGCKGRAV*EKHCPGYCKVGDIC Trigger: GCAAATGTCACCAACTTTGCAGTAGCCTGGACAGTGCTTCTCCCACACAGCCCTCCCCTTACACCCTCTGGGGCTGGTCACTCTGTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CCA 90 bp | CATCCAGCCTCAGGACTTCCAAGACTTCTGAGATCATGTCCCCTGTaGATGCCTACCAGGTACCTCTCCATTCCCCCTCCACACCTGGAA | + |
Preference number: 1 (lower is better) Translates to: HPASGLPRLLRSCPL*MPTRYLSIPPPHLE Trigger: TTCCAGGTGTGGAGGGGGAATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTCCTGAGGCTGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR TCA 90 bp | GTGACCATCACTAGCAACATCCAGCCTCAGGACTTCCAAGACTTCTaGGATCATGTCCCCTGTGGATGCCTACCAGGTACCTCTCCATTC | + |
Preference number: 1 (lower is better) Translates to: VTITSNIQPQDFQDF*DHVPCGCLPGTSPF Trigger: GAATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTCCTGAGGCTGGATGTTGCTAGTGATGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR TCA 90 bp | AGAAGCTACACATGGCCATGCTTGACTTTAACCCCAGCTCTAGGGTaGGGGATCTGGGAAGAGCAGAAATGGCCTCACTCTAGTCCAGTG | + |
Preference number: 1 (lower is better) Translates to: RSYTWPCLTLTPALG*GIWEEQKWPHSSPV Trigger: CACTGGACTAGAGTGAGGCCATTTCTGCTCTTCCCAGATCCCTCACCCTAGAGCTGGGGTTAAAGTCAAGCATGGCCATGTGTAGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CAA 90 bp | AGGCCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTaGGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAACCAATGGAT | + |
Preference number: 2 (lower is better) Translates to: RPSSRGPSNSRGSCS*VELVLGSWTEKPMD Trigger: ATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR TCA 90 bp | CCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCACACCTGGAACAGTATaGGGGATACAGCAGAGGTCA | + |
Preference number: 2 (lower is better) Translates to: PSSRGPSNSRGSCSLVELTPGTV*GIQQRS Trigger: TGACCTCTGCTGTATCCCTCATACTGTTCCAGGTGT...GAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR TCA 90 bp | CCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCCTACTGCAAAGTTGGTaGCATTTGCTCTTGGGAACG | + |
Preference number: 2 (lower is better) Translates to: PSSRGPSNSRGSCSLVELLLQSW*HLLLGT Trigger: CGTTCCCAAGAGCAAATGTCACCAACTTTGCAGTAG...GAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CAA 90 bp | GGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTaGGGTCCTGGACTGAGAAACCAATGGATCTGCAAACCAGGCACA | + |
Preference number: 2 (lower is better) Translates to: GLQTPGVPALWWSSF*GPGLRNQWICKPGT Trigger: TGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR GCA 90 bp | TTCTTGGGTCCTGGACTGAGAAACCAATGGATCTGCAAACCAGGCACACAGATCCATGTCCCCTGTGGATaGCTACCAGGTACCTCTCCA | + |
Preference number: 2 (lower is better) Translates to: FLGPGLRNQWICKPGTQIHVPCG*LPGTSP Trigger: TGGAGAGGTACCTGGTAGGCATCCACAGGGGACATG...GATCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR GCA 90 bp | TCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTTAGAAACCAATGGATCTaGAAACCAGGCACACAGATC | + |
Preference number: 2 (lower is better) Translates to: SRGPSNSRGSCSLVELVLRNQWI*KPGTQI Trigger: GATCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCT...AAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR TCA 90 bp | TTCTTGGGTCCTGGACTGAGAAACCAATGGATCTGCAAACCAGGCACACAGATCGACTTCCAAGACTTCTaGGATCATGTCCCCTGTGGA | + |
Preference number: 2 (lower is better) Translates to: FLGPGLRNQWICKPGTQIDFQDF*DHVPCG Trigger: TCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTC...GATCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR CCA 90 bp | ACAGGAACCATCAACTATACAGAAGTGACAGGCCTTTTCCTCTTTGTTTTTCCAGGCCCGGAACAAGGATaGCAGCTGGAAGGTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: TGTINYTEVTGLFLFVFPGPEQG*QLEGEG Trigger: TCCTTCACCTTCCAGCTGCCATCCTTGTTCCGGGCC...TGGAAAAACAAAGAGGAAAAGGCCTGTCACTTCTGTATAGTTGATGGTTCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR CCA 90 bp | ACAGGAACCATCAACTATACAGAAGTGACAGGCCTTTTCCTCTTTGTTTTTCCAGGACTGAGAAACCAATaGATCTGCAAACCAGGCACA | + |
Preference number: 2 (lower is better) Translates to: TGTINYTEVTGLFLFVFPGLRNQ*ICKPGT Trigger: TGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCC...TGGAAAAACAAAGAGGAAAAGGCCTGTCACTTCTGTATAGTTGATGGTTCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CAA 90 bp | GGGGCTTGTTTTTATTTGCTTTCCAGGTCAAATGGGTTCAGTAAATaGATCACTTGGGCAAATAAGAGGGAGTTCAATTTCTCATACTTT | + |
Preference number: 2 (lower is better) Translates to: GACFYLLSRSNGFSK*ITWANKREFNFSYF Trigger: AAAGTATGAGAAATTGAACTCCCTCTTATTTGCCCAAGTGATCAATTTACTGAACCCATTTGACCTGGAAAGCAAATAAAAACAAGCCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CCA 72 bp | CTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTaGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAAC | + |
Preference number: 3 (lower is better) Translates to: LGGLQTPGVPAL*WSSFLGPGLRN Trigger: GTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR-3UTR CAA 90 bp | TCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTTCAGGCTACTGCAAAGTaGGTGACATTTGCTCTTGGG | + |
Preference number: 3 (lower is better) Translates to: SRGPSNSRGSCSLVELVLQATAK*VTFALG Trigger: CCCAAGAGCAAATGTCACCAACTTTGCAGTAGCCTG...AAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR TCA 72 bp | ACTAGCAACATCCAGCCTCAGGACTTCCAAGACTTCTaGGATCATGTCCCCTGTGGATGCCTACCAGGTACC | + |
Preference number: 3 (lower is better) Translates to: TSNIQPQDFQDF*DHVPCGCLPGT Trigger: GGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTCCTGAGGCTGGATGTTGCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR TCA 72 bp | CTGCTCTTTGGTGGAGCTCGTTCTTGGGTCCTGGACTaGGAAACCAATGGATCTGCAAACCAGGCACACAGA | + |
Preference number: 3 (lower is better) Translates to: LLFGGARSWVLD*ETNGSANQAHR Trigger: TCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR TCA 72 bp | TCTGGGAAGAGCAGAAATGGCCTCACTCTAGTCCAGTaGGGGACCCTGTCTCAGGAATATGGAAGAAAGCGA | + |
Preference number: 3 (lower is better) Translates to: SGKSRNGLTLVQ*GTLSQEYGRKR Trigger: TCGCTTTCTTCCATATTCCTGAGACAGGGTCCCTCACTGGACTAGAGTGAGGCCATTTCTGCTCTTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CCA 72 bp | CTGTCTCAGGAATATGGAAGAAAGCGATGGGACATCTaGTGTCCTCCAGAATCACAGGTACAGTGTCTGCAC | + |
Preference number: 3 (lower is better) Translates to: LSQEYGRKRWDI*CPPESQVQCLH Trigger: GTGCAGACACTGTACCTGTGATTCTGGAGGACACCAGATGTCCCATCGCTTTCTTCCATATTCCTGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CCA 72 bp | TTTCCAGCCCCTTTCAGTCTGTCACTTGTCCTTTCTTaGTTAATCTATCCTAACCCTTGTGAAATAGGGACC | + |
Preference number: 3 (lower is better) Translates to: FPAPFSLSLVLS*LIYPNPCEIGT Trigger: GGTCCCTATTTCACAAGGGTTAGGATAGATTAACCAAGAAAGGACAAGTGACAGACTGAAAGGGGCTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CCA 72 bp | CTTTCCAGGTCAAATGGGTTCAGTAAATTGATCACTTaGGCAAATAAGAGGGAGTTCAATTTCTCATACTTT | + |
Preference number: 3 (lower is better) Translates to: LSRSNGFSKLIT*ANKREFNFSYF Trigger: AAAGTATGAGAAATTGAACTCCCTCTTATTTGCCCAAGTGATCAATTTACTGAACCCATTTGACCTGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CAA 72 bp | TCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTaGGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAA | + |
Preference number: 4 (lower is better) Translates to: SRGPSNSRGSCS*VELVLGSWTEK Trigger: TTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CAA 72 bp | ACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTaGGGTCCTGGACTGAGAAACCAATGGATCTGCAAA | + |
Preference number: 4 (lower is better) Translates to: TPGVPALWWSSF*GPGLRNQWICK Trigger: TTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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CDS-3UTR GCA 90 bp | GCTGTGTGGGAGAAGCACTGTCCAGGCTACTGCAAAGTTGGTGACATTTGCTCTCAGAGATACCTCGGATaGCTGACAGAAGCTGTGGGT | + |
Preference number: 4 (lower is better) Translates to: AVWEKHCPGYCKVGDICSQRYLG*LTEAVG Trigger: ACCCACAGCTTCTGTCAGGCATCCGAGGTATCTCTG...AGAGCAAATGTCACCAACTTTGCAGTAGCCTGGACAGTGCTTCTCCCACACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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CDS-3UTR CCA 90 bp | CCAAGACTTCTGAGATCATGTCCCCTGTGGATGCCTACCAGGTACCTCTCCATTCATGCGCATCAATCCTaGCATCTCATTCTCAGCTAT | + |
Preference number: 4 (lower is better) Translates to: PRLLRSCPLWMPTRYLSIHAHQS*HLILSY Trigger: ATAGCTGAGAATGAGATGCCAGGATTGATGCGCATG...AATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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3UTR CAA 72 bp | TTTTATTTGCTTTCCAGGTCAAATGGGTTCAGTAAATaGATCACTTGGGCAAATAAGAGGGAGTTCAATTTC | + |
Preference number: 4 (lower is better) Translates to: FYLLSRSNGFSK*ITWANKREFNF Trigger: GAAATTGAACTCCCTCTTATTTGCCCAAGTGATCAATTTACTGAACCCATTTGACCTGGAAAGCAAATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |
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CDS-3UTR CAA 90 bp | CCAAGACTTCTGAGATCATGTCCCCTGTGGATGCCTACCAGGTACCTCTCCATTTGGTTTGTGAAGGAGTaGCTCATCACGAAGCTGGGG | + |
Preference number: 5 (lower is better) Translates to: PRLLRSCPLWMPTRYLSIWFVKE*LITKLG Trigger: CCCCAGCTTCGTGATGAGCAACTCCTTCACAAACCA...AATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054607.16 |