RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AHCY (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027597

Ensembl transcript IDs: ENSMUST00000054607.16

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTaGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAACCAATGGATC +
Preference number: 1 (lower is better)
Translates to: GPALGGLQTPGVPAL*WSSFLGPGLRNQWI
Trigger: GATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CCA 90 bp CCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTaGAGCTCGTTCTTGGGTCCTGGACTGAGAAACCAATGGATCTGC +
Preference number: 1 (lower is better)
Translates to: PALGGLQTPGVPALW*SSFLGPGLRNQWIC
Trigger: GCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CCA 90 bp AAAGACAGAGTGACCAGCCCCAGAGGGTGTAAGGGGAGGGCTGTGTaGGAGAAGCACTGTCCAGGCTACTGCAAAGTTGGTGACATTTGC +
Preference number: 1 (lower is better)
Translates to: KDRVTSPRGCKGRAV*EKHCPGYCKVGDIC
Trigger: GCAAATGTCACCAACTTTGCAGTAGCCTGGACAGTGCTTCTCCCACACAGCCCTCCCCTTACACCCTCTGGGGCTGGTCACTCTGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CCA 90 bp CATCCAGCCTCAGGACTTCCAAGACTTCTGAGATCATGTCCCCTGTaGATGCCTACCAGGTACCTCTCCATTCCCCCTCCACACCTGGAA +
Preference number: 1 (lower is better)
Translates to: HPASGLPRLLRSCPL*MPTRYLSIPPPHLE
Trigger: TTCCAGGTGTGGAGGGGGAATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTCCTGAGGCTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR TCA 90 bp GTGACCATCACTAGCAACATCCAGCCTCAGGACTTCCAAGACTTCTaGGATCATGTCCCCTGTGGATGCCTACCAGGTACCTCTCCATTC +
Preference number: 1 (lower is better)
Translates to: VTITSNIQPQDFQDF*DHVPCGCLPGTSPF
Trigger: GAATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTCCTGAGGCTGGATGTTGCTAGTGATGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR TCA 90 bp AGAAGCTACACATGGCCATGCTTGACTTTAACCCCAGCTCTAGGGTaGGGGATCTGGGAAGAGCAGAAATGGCCTCACTCTAGTCCAGTG +
Preference number: 1 (lower is better)
Translates to: RSYTWPCLTLTPALG*GIWEEQKWPHSSPV
Trigger: CACTGGACTAGAGTGAGGCCATTTCTGCTCTTCCCAGATCCCTCACCCTAGAGCTGGGGTTAAAGTCAAGCATGGCCATGTGTAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CAA 90 bp AGGCCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTaGGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAACCAATGGAT +
Preference number: 2 (lower is better)
Translates to: RPSSRGPSNSRGSCS*VELVLGSWTEKPMD
Trigger: ATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR TCA 90 bp CCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCACACCTGGAACAGTATaGGGGATACAGCAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PSSRGPSNSRGSCSLVELTPGTV*GIQQRS
Trigger: TGACCTCTGCTGTATCCCTCATACTGTTCCAGGTGT...GAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR TCA 90 bp CCCAGCTCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCCTACTGCAAAGTTGGTaGCATTTGCTCTTGGGAACG +
Preference number: 2 (lower is better)
Translates to: PSSRGPSNSRGSCSLVELLLQSW*HLLLGT
Trigger: CGTTCCCAAGAGCAAATGTCACCAACTTTGCAGTAG...GAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGAGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CAA 90 bp GGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTaGGGTCCTGGACTGAGAAACCAATGGATCTGCAAACCAGGCACA +
Preference number: 2 (lower is better)
Translates to: GLQTPGVPALWWSSF*GPGLRNQWICKPGT
Trigger: TGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR GCA 90 bp TTCTTGGGTCCTGGACTGAGAAACCAATGGATCTGCAAACCAGGCACACAGATCCATGTCCCCTGTGGATaGCTACCAGGTACCTCTCCA +
Preference number: 2 (lower is better)
Translates to: FLGPGLRNQWICKPGTQIHVPCG*LPGTSP
Trigger: TGGAGAGGTACCTGGTAGGCATCCACAGGGGACATG...GATCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR GCA 90 bp TCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTTAGAAACCAATGGATCTaGAAACCAGGCACACAGATC +
Preference number: 2 (lower is better)
Translates to: SRGPSNSRGSCSLVELVLRNQWI*KPGTQI
Trigger: GATCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCT...AAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR TCA 90 bp TTCTTGGGTCCTGGACTGAGAAACCAATGGATCTGCAAACCAGGCACACAGATCGACTTCCAAGACTTCTaGGATCATGTCCCCTGTGGA +
Preference number: 2 (lower is better)
Translates to: FLGPGLRNQWICKPGTQIDFQDF*DHVPCG
Trigger: TCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTC...GATCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR CCA 90 bp ACAGGAACCATCAACTATACAGAAGTGACAGGCCTTTTCCTCTTTGTTTTTCCAGGCCCGGAACAAGGATaGCAGCTGGAAGGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: TGTINYTEVTGLFLFVFPGPEQG*QLEGEG
Trigger: TCCTTCACCTTCCAGCTGCCATCCTTGTTCCGGGCC...TGGAAAAACAAAGAGGAAAAGGCCTGTCACTTCTGTATAGTTGATGGTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR CCA 90 bp ACAGGAACCATCAACTATACAGAAGTGACAGGCCTTTTCCTCTTTGTTTTTCCAGGACTGAGAAACCAATaGATCTGCAAACCAGGCACA +
Preference number: 2 (lower is better)
Translates to: TGTINYTEVTGLFLFVFPGLRNQ*ICKPGT
Trigger: TGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCC...TGGAAAAACAAAGAGGAAAAGGCCTGTCACTTCTGTATAGTTGATGGTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CAA 90 bp GGGGCTTGTTTTTATTTGCTTTCCAGGTCAAATGGGTTCAGTAAATaGATCACTTGGGCAAATAAGAGGGAGTTCAATTTCTCATACTTT +
Preference number: 2 (lower is better)
Translates to: GACFYLLSRSNGFSK*ITWANKREFNFSYF
Trigger: AAAGTATGAGAAATTGAACTCCCTCTTATTTGCCCAAGTGATCAATTTACTGAACCCATTTGACCTGGAAAGCAAATAAAAACAAGCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CCA 72 bp CTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTaGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAAC +
Preference number: 3 (lower is better)
Translates to: LGGLQTPGVPAL*WSSFLGPGLRN
Trigger: GTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR-3UTR CAA 90 bp TCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTTCAGGCTACTGCAAAGTaGGTGACATTTGCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: SRGPSNSRGSCSLVELVLQATAK*VTFALG
Trigger: CCCAAGAGCAAATGTCACCAACTTTGCAGTAGCCTG...AAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR TCA 72 bp ACTAGCAACATCCAGCCTCAGGACTTCCAAGACTTCTaGGATCATGTCCCCTGTGGATGCCTACCAGGTACC +
Preference number: 3 (lower is better)
Translates to: TSNIQPQDFQDF*DHVPCGCLPGT
Trigger: GGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGGAAGTCCTGAGGCTGGATGTTGCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR TCA 72 bp CTGCTCTTTGGTGGAGCTCGTTCTTGGGTCCTGGACTaGGAAACCAATGGATCTGCAAACCAGGCACACAGA +
Preference number: 3 (lower is better)
Translates to: LLFGGARSWVLD*ETNGSANQAHR
Trigger: TCTGTGTGCCTGGTTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR TCA 72 bp TCTGGGAAGAGCAGAAATGGCCTCACTCTAGTCCAGTaGGGGACCCTGTCTCAGGAATATGGAAGAAAGCGA +
Preference number: 3 (lower is better)
Translates to: SGKSRNGLTLVQ*GTLSQEYGRKR
Trigger: TCGCTTTCTTCCATATTCCTGAGACAGGGTCCCTCACTGGACTAGAGTGAGGCCATTTCTGCTCTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CCA 72 bp CTGTCTCAGGAATATGGAAGAAAGCGATGGGACATCTaGTGTCCTCCAGAATCACAGGTACAGTGTCTGCAC +
Preference number: 3 (lower is better)
Translates to: LSQEYGRKRWDI*CPPESQVQCLH
Trigger: GTGCAGACACTGTACCTGTGATTCTGGAGGACACCAGATGTCCCATCGCTTTCTTCCATATTCCTGAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CCA 72 bp TTTCCAGCCCCTTTCAGTCTGTCACTTGTCCTTTCTTaGTTAATCTATCCTAACCCTTGTGAAATAGGGACC +
Preference number: 3 (lower is better)
Translates to: FPAPFSLSLVLS*LIYPNPCEIGT
Trigger: GGTCCCTATTTCACAAGGGTTAGGATAGATTAACCAAGAAAGGACAAGTGACAGACTGAAAGGGGCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CCA 72 bp CTTTCCAGGTCAAATGGGTTCAGTAAATTGATCACTTaGGCAAATAAGAGGGAGTTCAATTTCTCATACTTT +
Preference number: 3 (lower is better)
Translates to: LSRSNGFSKLIT*ANKREFNFSYF
Trigger: AAAGTATGAGAAATTGAACTCCCTCTTATTTGCCCAAGTGATCAATTTACTGAACCCATTTGACCTGGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CAA 72 bp TCTCGGGGGCCTTCAAACTCCAGGGGTTCCTGCTCTTaGGTGGAGCTCGTTCTTGGGTCCTGGACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: SRGPSNSRGSCS*VELVLGSWTEK
Trigger: TTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGTTTGAAGGCCCCCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CAA 72 bp ACTCCAGGGGTTCCTGCTCTTTGGTGGAGCTCGTTCTaGGGTCCTGGACTGAGAAACCAATGGATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TPGVPALWWSSF*GPGLRNQWICK
Trigger: TTTGCAGATCCATTGGTTTCTCAGTCCAGGACCCAAGAACGAGCTCCACCAAAGAGCAGGAACCCCTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
CDS-3UTR GCA 90 bp GCTGTGTGGGAGAAGCACTGTCCAGGCTACTGCAAAGTTGGTGACATTTGCTCTCAGAGATACCTCGGATaGCTGACAGAAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: AVWEKHCPGYCKVGDICSQRYLG*LTEAVG
Trigger: ACCCACAGCTTCTGTCAGGCATCCGAGGTATCTCTG...AGAGCAAATGTCACCAACTTTGCAGTAGCCTGGACAGTGCTTCTCCCACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
CDS-3UTR CCA 90 bp CCAAGACTTCTGAGATCATGTCCCCTGTGGATGCCTACCAGGTACCTCTCCATTCATGCGCATCAATCCTaGCATCTCATTCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: PRLLRSCPLWMPTRYLSIHAHQS*HLILSY
Trigger: ATAGCTGAGAATGAGATGCCAGGATTGATGCGCATG...AATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
3UTR CAA 72 bp TTTTATTTGCTTTCCAGGTCAAATGGGTTCAGTAAATaGATCACTTGGGCAAATAAGAGGGAGTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: FYLLSRSNGFSK*ITWANKREFNF
Trigger: GAAATTGAACTCCCTCTTATTTGCCCAAGTGATCAATTTACTGAACCCATTTGACCTGGAAAGCAAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16
CDS-3UTR CAA 90 bp CCAAGACTTCTGAGATCATGTCCCCTGTGGATGCCTACCAGGTACCTCTCCATTTGGTTTGTGAAGGAGTaGCTCATCACGAAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PRLLRSCPLWMPTRYLSIWFVKE*LITKLG
Trigger: CCCCAGCTTCGTGATGAGCAACTCCTTCACAAACCA...AATGGAGAGGTACCTGGTAGGCATCCACAGGGGACATGATCTCAGAAGTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000054607.16