Pregenerated sensors for AHCTF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026491Ensembl transcript IDs: ENSMUST00000027768.14, ENSMUST00000125816.2, ENSMUST00000127250.2, ENSMUST00000140489.2, ENSMUST00000145968.3
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTGGTCAGCAGTCACAGCAGATGGCAAATCTGTAACGCGCTCCTaGTTATGGGGTTCCCTGTGGCACACAGGTTTTTCCTTGGTCGCT | + |
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Preference number: 1 (lower is better) Translates to: SWSAVTADGKSVTRS*LWGSLWHTGFSLVA Trigger: AGCGACCAAGGAAAAACCTGTGTGCCACAGGGAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACTGCTGACCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
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| 3UTR TCA 90 bp | ACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATaGGCACAGGTACTGACCAGAGATCCGAGGAACAGCATCAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: TCPQFKFNTVSGKAQ*AQVLTRDPRNSIKV Trigger: CACTTTGATGCTGTTCCTCGGATCTCTGGTCAGTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR CCA 90 bp | TCACTGGTCTTCATCCACTCAGTTTCTGCTGGAAGTCCACATTTATaGAAAGATGTGCTAACAAACGCTTTTGTATTTCGGTCATCTGTA | + |
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Preference number: 1 (lower is better) Translates to: SLVFIHSVSAGSPHL*KDVLTNAFVFRSSV Trigger: TACAGATGACCGAAATACAAAAGCGTTTGTTAGCACATCTTTCCATAAATGTGGACTTCCAGCAGAAACTGAGTGGATGAAGACCAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR CCA 90 bp | AAAATATGTATTCTTATCACTGGTCTTCATCCACTCAGTTTCTGCTaGAAGTCCACATTTATGGAAAGATGTGCTAACAAACGCTTTTGT | + |
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Preference number: 1 (lower is better) Translates to: KICILITGLHPLSFC*KSTFMERCANKRFC Trigger: ACAAAAGCGTTTGTTAGCACATCTTTCCATAAATGTGGACTTCCAGCAGAAACTGAGTGGATGAAGACCAGTGATAAGAATACATATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCACAGCAGATGGCAAATCTGTAACGCGCTCCTGATTATGGGGTTCCCTGTGTCCCTTTGCTGGGGCTaGATAAACCATGAAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: SHSRWQICNALLIMGFPVSLCWG*INHEIP Trigger: AGGAATTTCATGGTTTATGCAGCCCCAGCAAAGGGA...CACAGGGAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCACAGCAGATGGCAAATCTGTAACGCGCTCCTGATTATGGGGTTCCCTGTGCAATCTTCTTCCCTTTaGTGGGGCTGCATAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: SHSRWQICNALLIMGFPVQSSSL*WGCINH Trigger: ATGGTTTATGCAGCCCCAGCAAAGGGAAGAAGATTG...CACAGGGAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCCCGGTCAATCTAACCTaGATAATTAAGTCTCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LSQHGKSKPCRLLFSAAGPVNLT*IIKSLN Trigger: GTTCAGAGACTTAATTATCCAGGTTAGATTGACCGG...GCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTGTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTCTGCAGTTTTTCTTaGCTTGCCGGTCTTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: KPCRLLFSAAGTRRCTVLFCSFS*LAGLYF Trigger: GAAATAAAGACCGGCAAGCCAAGAAAAACTGCAGAA...TAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140489.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTTCAGTGGAGGAAGATGCTGGCTTGGGAGACACAAAAACAGCACCTTCCCCACTCAGTTTCTGCTaGAAGTCCACATTTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: VSSVEEDAGLGDTKTAPSPLSFC*KSTFME Trigger: TTCCATAAATGTGGACTTCCAGCAGAAACTGAGTGG...GGAAGGTGCTGTTTTTGTGTCTCCCAAGCCAGCATCTTCCTCCACTGAACTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTTCCAAGAGTTTTTCCTaGTATTTCTGCAGTTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSSKSFS*YFCSFS Trigger: AGAAAAACTGCAGAAATAGCAGGAAAAACTCTTGGA...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000140489.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACAAGATGGCTTCTTTCTaGCCCTTCCAAGAGTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RVPFLFSDICSHSSILCNKMASF*PFQEFF Trigger: GAAAAACTCTTGGAAGGGGCAGAAAGAAGCCATCTT...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140489.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACCTGTCCACACAAATACTGTTaGCTTTTACAAACAGGTGCG | + |
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Preference number: 2 (lower is better) Translates to: FLSSFPTSAHTLPFSVTCPHKYC*LLQTGA Trigger: CGCACCTGTTTGTAAAAGTCAACAGTATTTGTGTGG...ACAGGTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACTTTTCCTGCTATTTCTaGAGTTTTTCTTGGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RVPFLFSDICSHSSILCNFSCYF*SFSWLA Trigger: GGCAAGCCAAGAAAAACTGCAGAAATAGCAGGAAAA...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140489.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACCTGTGAACTGCACTCCATGTaGAGTTACTCATTTACTGCT | + |
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Preference number: 2 (lower is better) Translates to: FLSSFPTSAHTLPFSVTCELHSM*SYSFTA Trigger: AGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTC...ACAGGTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACCCGGTCAATCTAACCTaGATAATTAAGTCTCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: RVPFLFSDICSHSSILCNPVNLT*IIKSLN Trigger: GTTCAGAGACTTAATTATCCAGGTTAGATTGACCGG...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGCCACACAAATACTGTTaGCTTTTACAAACAGGTGCG | + |
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Preference number: 2 (lower is better) Translates to: QNHMPTIQIQHSIRQSPMPHKYC*LLQTGA Trigger: CGCACCTGTTTGTAAAAGTCAACAGTATTTGTGTGG...CATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCGCAGGCACACGTCGGTaGACTGTTTTATTTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTAGTRR*TVLFLS Trigger: AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGC...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACCTGTGGAACAGCATCAAAGTaGATACATTATAAAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLSSFPTSAHTLPFSVTCGTASK*IHYKTA Trigger: TGCTGTTTTATAATGTATGCACTTTGATGCTGTTCC...ACAGGTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR CCA 72 bp | AGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCTaGCTGAACGGCCGCACCCGGACGGCCACTCTCACA | + |
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Preference number: 3 (lower is better) Translates to: SNCQQGNEHGLT*LNGRTRTATLT Trigger: TGTGAGAGTGGCCGTCCGGGTGCGGCCGTTCAGCCAGGTCAGTCCATGCTCATTGCCTTGCTGACAATTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| 3UTR TCA 72 bp | CCTGAATGGGTAGCCAGTGACTCTGCCACCACTTTCTaGGGGCCCTTTGCAGGGACATCCAGAGGAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: PEWVASDSATTF*GPFAGTSRGKY Trigger: ATATTTTCCTCTGGATGTCCCTGCAAAGGGCCCTCAGAAAGTGGTGGCAGAGTCACTGGCTACCCATTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR TCA 72 bp | ACAGCACCTTCCAAGTCTTCTGGTGATGGTGCGTCATaGTACTCTAAGGAGGTCTGGTCTGACCTGGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: TAPSKSSGDGAS*YSKEVWSDLVE Trigger: TTCCACCAGGTCAGACCAGACCTCCTTAGAGTATCATGACGCACCATCACCAGAAGACTTGGAAGGTGCTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTTCCACACAAATACTGTaGACTTTTACAAACAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: QHGKSKPCRLLFSAAGTRSTQIL*TFTNRC Trigger: GCACCTGTTTGTAAAAGTCAACAGTATTTGTGTGGA...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR GCA 72 bp | TCAGTTCTGAAAATGCTTCCACTGCAGCATCTCCCGTaGCTATTTGTTTCTTCACGGGTGAAGGAGCACCTT | + |
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Preference number: 3 (lower is better) Translates to: SVLKMLPLQHLP*LFVSSRVKEHL Trigger: AAGGTGCTCCTTCACCCGTGAAGAAACAAATAGGCACGGGAGATGCTGCAGTGGAAGCATTTTCAGAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR-3UTR CAA 90 bp | AAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATCCACACAAATACTGTaGACTTTTACAAACAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: KPCRLLFSAAGTRRCTVLSTQIL*TFTNRC Trigger: GCACCTGTTTGTAAAAGTCAACAGTATTTGTGTGGA...TAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR GCA 72 bp | GACATCTGCTCACACTCTTCCATTCTCTGTAACCTGTaGCTGAGGTTCTGTGGCAGTTACCAGTTTAAAACC | + |
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Preference number: 3 (lower is better) Translates to: DICSHSSILCNL*LRFCGSYQFKT Trigger: GGTTTTAAACTGGTAACTGCCACAGAACCTCAGGCACAGGTTACAGAGAATGGAAGAGTGTGAGCAGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR TCA 72 bp | TCTGCTCACACTCTTCCATTCTCTGTAACCTGTGCCTaGGGTTCTGTGGCAGTTACCAGTTTAAAACCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SAHTLPFSVTCA*GSVAVTSLKPE Trigger: TTCAGGTTTTAAACTGGTAACTGCCACAGAACCTCAGGCACAGGTTACAGAGAATGGAAGAGTGTGAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR GCA 72 bp | GCATCAAGTCGTATAAAACGCCTGCACTACAAGAACTaGACTCCATGTGGAGTTACTCATTTACTGCTTACA | + |
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Preference number: 3 (lower is better) Translates to: ASSRIKRLHYKN*TPCGVTHLLLT Trigger: TGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGTGCAGGCGTTTTATACGACTTGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| 3UTR GCA 72 bp | TGTATTCTTATCACTGGTCTTCATCCACTCAGTTTCTaGTGGAAGTCCACATTTATGGAAAGATGTGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: CILITGLHPLSF*WKSTFMERCAN Trigger: GTTAGCACATCTTTCCATAAATGTGGACTTCCAGCAGAAACTGAGTGGATGAAGACCAGTGATAAGAATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR CCA 72 bp | TTCATCCACTCAGTTTCTGCTGGAAGTCCACATTTATaGAAAGATGTGCTAACAAACGCTTTTGTATTTCGG | + |
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Preference number: 3 (lower is better) Translates to: FIHSVSAGSPHL*KDVLTNAFVFR Trigger: CCGAAATACAAAAGCGTTTGTTAGCACATCTTTCCATAAATGTGGACTTCCAGCAGAAACTGAGTGGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR CCA 72 bp | ATTCTTATCACTGGTCTTCATCCACTCAGTTTCTGCTaGAAGTCCACATTTATGGAAAGATGTGCTAACAAA | + |
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Preference number: 3 (lower is better) Translates to: ILITGLHPLSFC*KSTFMERCANK Trigger: TTTGTTAGCACATCTTTCCATAAATGTGGACTTCCAGCAGAAACTGAGTGGATGAAGACCAGTGATAAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127250.2 |
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| 3UTR CCA 72 bp | TATAAAACGCCTGCACTACAAGAACTGCACTCCATGTaGAGTTACTCATTTACTGCTTACAAAATTGTACAA | + |
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Preference number: 3 (lower is better) Translates to: YKTPALQELHSM*SYSFTAYKIVQ Trigger: TTGTACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGTGCAGGCGTTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| CDS-3UTR TCA 90 bp | CTTTCACAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCCTTCCCGGCGTACCCTaGGGTTCCGGCTCCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSQHGKSKPCRLLFSAAGLPGVP*GSGSGS Trigger: GGAGCCGGAGCCGGAACCTCAGGGTACGCCGGGAAG...GCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTGTGAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR CCA 90 bp | TGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTGTGCCCTGGGCAGATaGCGTGAGAGCAGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CRLLFSAAGTRRCTVLFLCALGR*RESSGG Trigger: GCCGCCGCTGCTCTCACGCCATCTGCCCAGGGCACA...AAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR CCA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCTAGTCCTTGTGCCCTaGGCAGATGGCGTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QHGKSKPCRLLFSAAGTRLVLVP*ADGVRA Trigger: TGCTCTCACGCCATCTGCCCAGGGCACAAGGACTAG...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR TCA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTACCATGTGTGCGTACTaGCAGAGAAGCTGGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: QHGKSKPCRLLFSAAGTRTMCAY*QRSWVT Trigger: GGTCACCCAGCTTCTCTGTCAGTACGCACACATGGT...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR TCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTCCACTTCCCTCTGGGTaGGCGCTCAGACTTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDAPLPSG*ALRLLP Trigger: CGGCAGAAGTCTGAGCGCTCACCCAGAGGGAAGTGG...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR GCA 90 bp | AAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTAAGGAGTTTCTTCAGCTaGTGGCTCGGGTGGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: KPCRLLFSAAGTRRCTVLRSFFS*WLGWLR Trigger: ACGCAGCCACCCGAGCCAGCAGCTGAAGAAACTCCT...TAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR CCA 90 bp | ATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTAACTGGAAGCACAGGTaGCGCCCCTCTCTCATCACT | + |
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Preference number: 4 (lower is better) Translates to: MGSLNLVGSSSQQQAHVGNWKHR*RPSLIT Trigger: AGTGATGAGAGAGGGGCGCCACCTGTGCTTCCAGTT...ACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR TCA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTTTCTACAGGAGGAGGTaGCCAAGAACTTCCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QHGKSKPCRLLFSAAGTRFYRRR*PRTSFS Trigger: GGAAAAGGAAGTTCTTGGTCACCTCCTCCTGTAGAA...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| CDS-3UTR CCA 90 bp | CACACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATCGCCTCAGGAAGCTCTaGGTGTGGGAAAGAGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: HTVRSRHRHSPHFLIIHDRLRKL*VWERVY Trigger: GTACACTCTTTCCCACACCCAGAGCTTCCTGAGGCG...ATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR CCA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTGCCACAGACTCTTTGTaGTCTGCTGTAAGTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: QHGKSKPCRLLFSAAGTRATDSL*SAVSME Trigger: CTCCATACTTACAGCAGACCACAAAGAGTCTGTGGC...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR TCA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACGGAGCGGGAGGACTCTaGGCTGTCAGTTGGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RVPFLFSDICSHSSILCNGAGGL*AVSWFS Trigger: TGAGAACCAACTGACAGCTCAGAGTCCTCCCGCTCC...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR GCA 90 bp | TGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTTTCTGAGGGCCCTTTaGAGGGACATCCAGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CRLLFSAAGTRRCTVLFLFLRAL*RDIQRK Trigger: TTTCCTCTGGATGTCCCTGCAAAGGGCCCTCAGAAA...AAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR GCA 90 bp | ATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTAGAACTTCCTTTTCCTaGTTGCTCTTGTCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: MGSLNLVGSSSQQQAHVGRTSFS*LLLSSQ Trigger: CTGTGAAGACAAGAGCAAGCAGGAAAAGGAAGTTCT...ACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140489.2 |
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| CDS-3UTR CCA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACGGTTCCACTTCCCTCTaGGTGAGCGCTCAGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYGSTSL*VSAQTS Trigger: AGAAGTCTGAGCGCTCACCCAGAGGGAAGTGGAACC...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR CCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTAGCAGTCACAGCAGATaGCAAATCTGTAACGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDASSHSR*QICNAL Trigger: GAGCGCGTTACAGATTTGCCATCTGCTGTGACTGCT...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR TCA 90 bp | CACACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATTCATTCTCAGGCTCTTaGAAGGCAACTGCATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HTVRSRHRHSPHFLIIHDSFSGS*KATAWT Trigger: TGTCCATGCAGTTGCCTTTCAAGAGCCTGAGAATGA...ATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCTTGGCCTCCTCTTCTaGATTTTGAACTTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QHGKSKPCRLLFSAAGTRLGLLF*ILNFKI Trigger: AATCTTGAAGTTCAAAATTCAGAAGAGGAGGCCAAG...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTTTCAGTGGAGGAAGATaGTGGCTTGGGAGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDAFSGGR*WLGRHK Trigger: TTTGTGTCTCCCAAGCCAGCATCTTCCTCCACTGAA...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTTTTTCCTGCTATTTCTaGAGTTTTTCTTGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QHGKSKPCRLLFSAAGTRFSCYF*SFSWLA Trigger: GGCAAGCCAAGAAAAACTGCAGAAATAGCAGGAAAA...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCGGCAGAAGCCCCGAGTaGCAGAACCACAGAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPGRSPE*QNHRTM Trigger: CATGGTTCTGTGGTTCTGCCACTCGGGGCTTCTGCC...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTGGCAAGTCACAAAACTaGTGCTCAATAGTACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSGKSQN*CSIVLR Trigger: TCTCAGTACTATTGAGCAGCAGTTTTGTGACTTGCC...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCGCTGGCTCGGGTGGCTaGGTTCTCAGCCTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTAGSGG*VLSLSL Trigger: AAGACTGAGGCTGAGAACGCAGCCACCCGAGCCAGC...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTTCCTGTGTTTCTGCTTaGTCTTGTCTTCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDASCVSA*SCLHSP Trigger: AGGACTGTGAAGACAAGAGCAAGCAGAAACACAGGA...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | AAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTAGTTCATTTACTCCACTaGATCTATATGCAGATAACC | + |
|
Preference number: 4 (lower is better) Translates to: KPCRLLFSAAGTRRCTVLVHLLH*IYMQIT Trigger: GGTTATCTGCATATAGATTCAGTGGAGTAAATGAAC...TAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTGGTCTAGAAACTTCATaGAAAACTGAGGATGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDAGLETS*KTEDVD Trigger: GTCGACATCCTCAGTTTTTCATGAAGTTTCTAGACC...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACATAAACTCCAAACACTaGGAAGGCTGGGGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYINSKH*EGWGTG Trigger: TCCTGTACCCCAGCCTTCTCAGTGTTTGGAGTTTAT...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCTGCTGCCACGGGAGTTaGTTCCTTACTTCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPCCHGS*FLTSGV Trigger: GACACCAGAAGTAAGGAAGCAACTCCCGTGGCAGCA...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTTTGGATATACTTTTCTaGCTGGTTCTCAAGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDALDILF*LVLKAG Trigger: TCCTGCCTTGAGAACCAGGCAGAAAAGTATATCCAA...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAAATTGCTCTGGAGGTaGGTAGGAAGGAGGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPKLLWR*VGRRNP Trigger: GGGGTTCCTCCTTCCTACCCACCTCCAGAGCAATTT...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | ATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTCATGATTCTCAACACTaGTACTGGACTGTAAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: MGSLNLVGSSSQQQAHVGHDSQH*YWTVKI Trigger: AATTTTTACAGTCCAGTACCAGTGTTGAGAATCATG...ACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCGGCACTTGGAGCTGGTaGACCCAGAGCTTTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPGTWSW*TQSFQH Trigger: ATGTTGAAAGCTCTGGGTCCACCAGCTCCAAGTGCC...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | CACACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATTGTTTGTGCTCTCCCTaGCTCATAAAAGCTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: HTVRSRHRHSPHFLIIHDCLCSP*LIKASI Trigger: AATTGAAGCTTTTATGAGTCAGGGAGAGCACAAACA...ATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | AGTCACAGCAGATGGCAAATCTGTAACGCGCTCCTGATTATGGGGTTCCCTGTGTTCTCCTTTGGTACATaGGCTTCTATTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSRWQICNALLIMGFPVFSFGT*ASISSS Trigger: AGAAGATGAAATAGAAGCTCATGTACCAAAGGAGAA...CACAGGGAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR GCA 90 bp | CAACACTTATTTATTGATGAACATCATGGCTTCCATCAGGCGCCATTACCAACGCCACAGAACCATGTGTaGGTACTGACAGAGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHLFIDEHHGFHQAPLPTPQNHV*VLTEKL Trigger: CAGCTTCTCTGTCAGTACGCACACATGGTTCTGTGG...CGTTGGTAATGGCGCCTGATGGAAGCCATGATGTTCATCAATAAATAAGTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTATCCAACAGATTTTCTaGAATTGCCACTTTAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDAIQQIF*NCHFNR Trigger: CCGGTTAAAGTGGCAATTGCAGAAAATCTGTTGGAT...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTACAGCTAACTTTCTCTaGACTCTAGGTAGGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVRSRHRHSPHFLIIHDATANFL*TLGRIF Trigger: GAAAATCCTACCTAGAGTCCAGAGAAAGTTAGCTGT...AGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACCTGTAGGAAGATGCTGGCTTaGGAGACACAAAAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSSFPTSAHTLPFSVTCRKMLA*ETQKQH Trigger: GTGCTGTTTTTGTGTCTCCCAAGCCAGCATCTTCCT...ACAGGTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACTCTTGGAGTTTGAAGTaGAGGTTTCCCCTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYSWSLK*RFPLHR Trigger: TCTGTGAAGGGGAAACCTCCACTTCAAACTCCAAGA...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | CTACAAAAAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCGACAGAGAAGCTGGGTaGCCATGTGCTTGTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQKGKITCPQFKFNTVSGDREAG*PCACCS Trigger: TGAGCAACAAGCACATGGTCACCCAGCTTCTCTGTC...GCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTTTTTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | CAACACTTATTTATTGATGAACATCATGGCTTCCATCAGGCGCCATTACCAACGTTCTACAGGAGGAGGTaGCCAAGAACTTCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHLFIDEHHGFHQAPLPTFYRRR*PRTSFS Trigger: GGAAAAGGAAGTTCTTGGTCACCTCCTCCTGTAGAA...CGTTGGTAATGGCGCCTGATGGAAGCCATGATGTTCATCAATAAATAAGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR GCA 90 bp | AATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACCTGGTGGAAGCTGTaGTGTCTTCTTTGCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NHMPTIQIQHSIRQSPMSTWWKL*CLLCSH Trigger: ATGTGAGCAAAGAAGACAGCACAGCTTCCACCAGGT...GCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAGGCTTAGGGCATGCTaGCTTCTTGTGAGAGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPRLRAC*LLVRVL Trigger: TAGAACTCTCACAAGAAGGCAGCATGCCCTAAGCCT...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCCCCGTCATGACTTGCTaGCTCACTCCCTTTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTPVMTC*LTPFEI Trigger: GATCTCAAAGGGAGTGAGGCAGCAAGTCATGACGGG...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACTTGGATATACTTTTCTaGCTGGTTCTCAAGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVPFLFSDICSHSSILCNLDILF*LVLKAG Trigger: TCCTGCCTTGAGAACCAGGCAGAAAAGTATATCCAA...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCTATTTCTGCAGTTTTTCTTGGCTTGCCGGTCTTTATTTCATCCACTGGACTTCCTTTTCCTGCTTaGTCTTGTCTTCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAISAVFLGLPVFISSTGLPFPA*SCLHSP Trigger: AGGACTGTGAAGACAAGAGCAAGCAGGAAAAGGAAG...TCCAGTGGATGAAATAAAGACCGGCAAGCCAAGAAAAACTGCAGAAATAGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140489.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACCCAGCACAAGTTACATaGATAACTCCAGAGTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYPAQVT*ITPESN Trigger: GTTAGACTCTGGAGTTATCCATGTAACTTGTGCTGG...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS-3UTR CCA 90 bp | TGCTGCTCAATAGTACTGAGATTATACTCAAGTTTCTCTGCCCCTAAGGGATACGCCACAGACTCTTTGTaGTCTGCTGTAAGTATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CCSIVLRLYSSFSAPKGYATDSL*SAVSME Trigger: CTCCATACTTACAGCAGACCACAAAGAGTCTGTGGC...GTATCCCTTAGGGGCAGAGAAACTTGAGTATAATCTCAGTACTATTGAGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CCA 90 bp | CAAGATTTTCACATCCAATTAGATAAGCTCCCTTGGGCTAGACTCAATCTTCTTGGCACTTGGAGCTGGTaGACCCAGAGCTTTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QDFHIQLDKLPWARLNLLGTWSW*TQSFQH Trigger: ATGTTGAAAGCTCTGGGTCCACCAGCTCCAAGTGCC...AAGAAGATTGAGTCTAGCCCAAGGGAGCTTATCTAATTGGATGTGAAAATCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCTTATGGGGTTCCCTGTaGCACACAGGTTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPLWGSL*HTGFSL Trigger: CAAGGAAAAACCTGTGTGCCACAGGGAACCCCATAA...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACTCTTCTCTGTCTCCATaGGATGGAAATCTCTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: RVPFLFSDICSHSSILCNSSLSP*DGNLSI Trigger: TATAGAGAGATTTCCATCTCATGGAGACAGAGAAGA...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACGGTCACGATCACTCATaGGATTATTCTTCAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RVPFLFSDICSHSSILCNGHDHS*DYSSES Trigger: AGATTCTGAAGAATAATCTCATGAGTGATCGTGACC...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACCTGTGGAACATCTTTCTTCTaGGGACTTGTCTGTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLSSFPTSAHTLPFSVTCGTSFF*GLVCSL Trigger: TAAGGAACAGACAAGTCCTCAGAAGAAAGATGTTCC...ACAGGTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACCTGTAAGATGGCTTCTTTCTaGCCCTTCCAAGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSSFPTSAHTLPFSVTCKMASF*PFQEFF Trigger: GAAAAACTCTTGGAAGGGGCAGAAAGAAGCCATCTT...ACAGGTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCCTCTCAGTGATACCCTaGGCCTCCATTGCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTLSVIP*ASIAKQ Trigger: CTGTTTTGCAATGGAGGCCCAGGGTATCACTGAGAG...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | CAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGGGCTGGGGTACAGGATaGACAACCAAATCCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QNHMPTIQIQHSIRQSPMGWGTG*TTKSSN Trigger: ATTACTGGATTTGGTTGTCCATCCTGTACCCCAGCC...CATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | CAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGACCTTGTGGGATTCTTaGTCAGCAGTCACAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNHMPTIQIQHSIRQSPMTLWDS*SAVTAD Trigger: ATCTGCTGTGACTGCTGACCAAGAATCCCACAAGGT...CATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCCCCAAGGAACTTGTCTaGATTGCTGCTGACAATATA | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPPKELV*IAADNI Trigger: TATATTGTCAGCAGCAATTCAGACAAGTTCCTTGGG...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | CAACACTTATTTATTGATGAACATCATGGCTTCCATCAGGCGCCATTACCAACGAGCTTCAATTATCTTTaGATGTTGCCACGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHLFIDEHHGFHQAPLPTSFNYL*MLPRCR Trigger: CCTGCATCGTGGCAACATTCAAAGATAATTGAAGCT...CGTTGGTAATGGCGCCTGATGGAAGCCATGATGTTCATCAATAAATAAGTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | ACTACAAGAACTGCACTCCATGTGGAGTTACTCATTTACTGCTTACAAAATTGTGTTGGCTTCATTGTCTaGAGATACCGGAGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTRTALHVELLIYCLQNCVGFIV*RYRRAC Trigger: ACAGGCTCTCCGGTATCTTCAGACAATGAAGCCAAC...ACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAACTTCATGAAAAACTaGGGATGTCGACAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPNFMKN*GCRQVV Trigger: TACCACCTGTCGACATCCTCAGTTTTTCATGAAGTT...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | ACTACAAGAACTGCACTCCATGTGGAGTTACTCATTTACTGCTTACAAAATTGTCTCTTGAAAGGCAACTaGATGGACAGGAACCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTRTALHVELLIYCLQNCLLKGN*MDRNPS Trigger: GGAAGGGTTCCTGTCCATGCAGTTGCCTTTCAAGAG...ACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCGTTCCTTACCAGTTGTaGCACCATCAGCTTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTVPYQL*HHQLLR Trigger: CCTTAGAAGCTGATGGTGGCACAACTGGTAAGGAAC...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCATATCAAGTAATGCGTaGATGCTAGCAGGAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPISSNA*MLAGGY Trigger: ATACCCTCCTGCTAGCATCCACGCATTACTTGATAT...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | CAACACTTATTTATTGATGAACATCATGGCTTCCATCAGGCGCCATTACCAACGCCACTCAGTTTCTGCTaGAAGTCCACATTTATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHLFIDEHHGFHQAPLPTPLSFC*KSTFME Trigger: TTCCATAAATGTGGACTTCCAGCAGAAACTGAGTGG...CGTTGGTAATGGCGCCTGATGGAAGCCATGATGTTCATCAATAAATAAGTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | ACTACAAGAACTGCACTCCATGTGGAGTTACTCATTTACTGCTTACAAAATTGTTACTCTAAGGAGGTCTaGTCTGACCTGGTGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTRTALHVELLIYCLQNCYSKEV*SDLVEA Trigger: AGCTTCCACCAGGTCAGACCAGACCTCCTTAGAGTA...ACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCAGTGGAGGAAGATGCTaGCTTGGGAGACACAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTSGGRC*LGRHKN Trigger: GTTTTTGTGTCTCCCAAGCCAGCATCTTCCTCCACT...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCTTTAGAGGCAGTTGCTaGTCACTGTGTTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPFRGSC*SLCSSC Trigger: ACAAGATGAACACAGTGACCAGCAACTGCCTCTAAA...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | CAAGATTTTCACATCCAATTAGATAAGCTCCCTTGGGCTAGACTCAATCTTCTTCTTGCAAGGGTTTGGTaGAAGAAGGAATGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDFHIQLDKLPWARLNLLLARVW*KKEWSL Trigger: CAAGGACCATTCCTTCTTCCACCAAACCCTTGCAAG...AAGAAGATTGAGTCTAGCCCAAGGGAGCTTATCTAATTGGATGTGAAAATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CCA 90 bp | CAAGATTTTCACATCCAATTAGATAAGCTCCCTTGGGCTAGACTCAATCTTCTTTCTCTTGCAAGGGTTTaGTGGAAGAAGGAATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDFHIQLDKLPWARLNLLSLARV*WKKEWS Trigger: GGACCATTCCTTCTTCCACCAAACCCTTGCAAGAGA...AAGAAGATTGAGTCTAGCCCAAGGGAGCTTATCTAATTGGATGTGAAAATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR TCA 90 bp | AATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCAGTAGAACAGTGAGGTaGAGGATAACTTCATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NHMPTIQIQHSIRQSPMSSRTVR*RITSLL Trigger: TAGCAATGAAGTTATCCTTCACCTCACTGTTCTACT...GCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCATACAACTCATCAAATaGAAGATTCTTGGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPIQLIK*KILGLL Trigger: GAGGAGGCCAAGAATCTTTCATTTGATGAGTTGTAT...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTCATTATCCATGATGCTACTCGGTAGAAAAATAACACACAAAGCACACAAGAGGCAACTGGGATaGGTCAAGCTTTGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSMMLLGRKITHKAHKRQLG*VKLWLF Trigger: GAAGAGCCAAAGCTTGACTCATCCCAGTTGCCTCTT...GTGTGCTTTGTGTGTTATTTTTCTACCGAGTAGCATCATGGATAATGAGAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCATTATCTTTGAATGTTaGCACGATGCAGGCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NHMPTIQIQHSIRQSPMSIIFEC*HDAGFA Trigger: TGCAAAGCCTGCATCGTGGCAACATTCAAAGATAAT...GCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | CAACACTTATTTATTGATGAACATCATGGCTTCCATCAGGCGCCATTACCAACGTTCACTAAGCATTCCTaGTCAGTGTTTGTAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHLFIDEHHGFHQAPLPTFTKHS*SVFVNG Trigger: GCCATTTACAAACACTGAGCAGGAATGCTTAGTGAA...CGTTGGTAATGGCGCCTGATGGAAGCCATGATGTTCATCAATAAATAAGTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCTTCAATAGTCACTTCTaGGAAATGCAGGAGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPFNSHF*EMQEIT Trigger: AGTGATCTCCTGCATTTCCCAGAAGTGACTATTGAA...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACGTTCACCTAGAAGCTTaGAAGTATTGGATATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYVHLEA*KYWIYF Trigger: AAAGTATATCCAATACTTCCAAGCTTCTAGGTGAAC...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCTTCTGCAGTTTTTCTTaGCTTGCCGGTCTTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPFCSFS*LAGLYF Trigger: GAAATAAAGACCGGCAAGCCAAGAAAAACTGCAGAA...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | CAACACTTATTTATTGATGAACATCATGGCTTCCATCAGGCGCCATTACCAACGAGGCAGAAATATAATTaGCACGCTGTAAATGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHLFIDEHHGFHQAPLPTRQKYN*HAVNGE Trigger: TTCACCATTTACAGCGTGCCAATTATATTTCTGCCT...CGTTGGTAATGGCGCCTGATGGAAGCCATGATGTTCATCAATAAATAAGTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | ACTACAAGAACTGCACTCCATGTGGAGTTACTCATTTACTGCTTACAAAATTGTCCAGAACTGACGTCTTaGAGTTTGAAGTGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTRTALHVELLIYCLQNCPELTS*SLKWRF Trigger: AAACCTCCACTTCAAACTCCAAGACGTCAGTTCTGG...ACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTCATTATCCATGATGCTACTCGGTAGAAAAATAACACACAAAGCACACCTGCCTCACTCCCTTTaGGATCATCTAGAATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSMMLLGRKITHKAHLPHSL*DHLEFL Trigger: CAGAAATTCTAGATGATCTCAAAGGGAGTGAGGCAG...GTGTGCTTTGTGTGTTATTTTTCTACCGAGTAGCATCATGGATAATGAGAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | CAAGATTTTCACATCCAATTAGATAAGCTCCCTTGGGCTAGACTCAATCTTCTTAGAAGGAATGGTCCTTaGATTTACATGAATCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QDFHIQLDKLPWARLNLLRRNGP*IYMNLV Trigger: CACGAGATTCATGTAAATGCAAGGACCATTCCTTCT...AAGAAGATTGAGTCTAGCCCAAGGGAGCTTATCTAATTGGATGTGAAAATCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGGGAAGTCCACATTTATaGAAAGATGTGCTAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNHMPTIQIQHSIRQSPMGSPHL*KDVLTN Trigger: GTTTGTTAGCACATCTTTCCATAAATGTGGACTTCC...CATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | CTACAAAAAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCTGTCATCATTCTGGCTaGTATTTACAGTCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQKGKITCPQFKFNTVSGCHHSG*YLQSLH Trigger: ATGCAGAGACTGTAAATACCAGCCAGAATGATGACA...GCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTTTTTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CCA 90 bp | AATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCGTTCACCTAGAAGCTTaGAAGTATTGGATATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHMPTIQIQHSIRQSPMSVHLEA*KYWIYF Trigger: AAAGTATATCCAATACTTCCAAGCTTCTAGGTGAAC...GCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR CCA 90 bp | AATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCAGTCCTGCTTCTTTTTaGTTTTTGTTCTATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NHMPTIQIQHSIRQSPMSSPASF*FLFYDL Trigger: GAGATCATAGAACAAAAACCAAAAAGAAGCAGGACT...GCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAGTCCTGCTTCTTTTTaGTTTTTGTTCTATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAKSHAHNSNSTQYQAKPSPASF*FLFYDL Trigger: GAGATCATAGAACAAAAACCAAAAAGAAGCAGGACT...GGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR CCA 90 bp | GAACTTCAAGATTTTCACATCCAATTAGATAAGCTCCCTTGGGCTAGACTCAATTGGTGGAAGAAGGAATaGTCCTTGCATTTACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELQDFHIQLDKLPWARLNWWKKE*SLHLHE Trigger: TTCATGTAAATGCAAGGACCATTCCTTCTTCCACCA...ATTGAGTCTAGCCCAAGGGAGCTTATCTAATTGGATGTGAAAATCTTGAAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTCATTATCCATGATGCTACTCGGTAGAAAAATAACACACAAAGCACACGATAACTTCAAGGTCTaGTGCCTCAACTTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSMMLLGRKITHKAHDNFKV*CLNFIL Trigger: CAGAATGAAGTTGAGGCATCAGACCTTGAAGTTATC...GTGTGCTTTGTGTGTTATTTTTCTACCGAGTAGCATCATGGATAATGAGAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | CTACAAAAAGGCAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCTTCTCCTTTGGTACATaGGCTTCTATTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQKGKITCPQFKFNTVSGFSFGT*ASISSS Trigger: AGAAGATGAAATAGAAGCTCATGTACCAAAGGAGAA...GCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTGCCTTTTTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | CAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGTCCAAGAGTTTTTCCTaGTATTTCTGCAGTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNHMPTIQIQHSIRQSPMSKSFS*YFCSFS Trigger: AGAAAAACTGCAGAAATAGCAGGAAAAACTCTTGGA...CATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTCATTATCCATGATGCTACTCGGTAGAAAAATAACACACAAAGCACACCTATTATCCACGTTCTaGTGTAACCAGTCAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSMMLLGRKITHKAHLLSTF*CNQSKV Trigger: GACTTTTGACTGGTTACATCAGAACGTGGATAATAG...GTGTGCTTTGTGTGTTATTTTTCTACCGAGTAGCATCATGGATAATGAGAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR TCA 90 bp | ACTACAAGAACTGCACTCCATGTGGAGTTACTCATTTACTGCTTACAAAATTGTTCTCTGGGATGTATTTaGAATTGGAGTTCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTRTALHVELLIYCLQNCSLGCI*NWSSNK Trigger: TTTGTTGGAACTCCAATTTCAAATACATCCCAGAGA...ACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCATTATCCATGATGCTACTCGGTAGAAAAATAACACACAAAGCACACGGTATTTACAGTCTCTaGATGTGGTTCCTTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSLSMMLLGRKITHKAHGIYSL*MWFLNS Trigger: ACTGTTAAGGAACCACATGCAGAGACTGTAAATACC...GTGTGCTTTGTGTGTTATTTTTCTACCGAGTAGCATCATGGATAATGAGAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR GCA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCAGAATTTCTGTACTTTaGCCATTTTCTACAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTRISVL*PFSTDF Trigger: GAAGTCTGTAGAAAATGGGCAAAGTACAGAAATTCT...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CCA 90 bp | CGGCGTACCCTGAGGTTCCGGCTCCGGCTCCACAGCACCAGAACTTaGCAGTGTGCCTTGGCTAACGTCCTTCTTCTTTCCTCTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRTLRFRLRLHSTRT*QCALANVLLLSSPR Trigger: CCTAGGAGAGGAAAGAAGAAGGACGTTAGCCAAGGCACACTGCCAAGTTCTGGTGCTGTGGAGCCGGAGCCGGAACCTCAGGGTACGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTGAGGTAACCGGGCACTaGGAGCTGGTGGACCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHGKSKPCRLLFSAAGTREVTGH*ELVDPE Trigger: CTCTGGGTCCACCAGCTCCAAGTGCCCGGTTACCTC...ACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS TCA 90 bp | GGCAGAAGCCCCGAGTGGCAGAACCACAGAACCATGTGTGCGTACTaGCAGAGAAGCTGGGTGACCATGTGCTTGTTGCTCAAGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GRSPEWQNHRTMCAY*QRSWVTMCLLLKST Trigger: GGTGGACTTGAGCAACAAGCACATGGTCACCCAGCTTCTCTGTCAGTACGCACACATGGTTCTGTGGTTCTGCCACTCGGGGCTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS GCA 90 bp | GCCTTCGGGCAGAAGCCCCGAGTGGCAGAACCACAGAACCATGTGTaGGTACTGACAGAGAAGCTGGGTGACCATGTGCTTGTTGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: AFGQKPRVAEPQNHV*VLTEKLGDHVLVAQ Trigger: TTGAGCAACAAGCACATGGTCACCCAGCTTCTCTGTCAGTACGCACACATGGTTCTGTGGTTCTGCCACTCGGGGCTTCTGCCCGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGCAGATGGCAAATCTGTAACGCGCTCCTGATTATGGGGTTCCCTGTGGAGGTAACCGGGCACTaGGAGCTGGTGGACCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHSRWQICNALLIMGFPVEVTGH*ELVDPE Trigger: CTCTGGGTCCACCAGCTCCAAGTGCCCGGTTACCTC...CACAGGGAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CAA 90 bp | AAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTACTTTCTGAGGGCCCTTaGCAGGGACATCCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KPCRLLFSAAGTRRCTVLLSEGP*QGHPEE Trigger: TTCCTCTGGATGTCCCTGCAAAGGGCCCTCAGAAAG...TAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CTTTCACAGCATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCTACCCTGGGCCTCCATaGCAAAACAGCTTAAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSQHGKSKPCRLLFSAAGYPGPP*QNSLRL Trigger: CAGTCTTAAGCTGTTTTGCAATGGAGGCCCAGGGTA...GCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCATGCTGTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS TCA 90 bp | TGGCTAACGTCCTTCTTCTTTCCTCTCCTAGGAGCGGGAGGACTCTaGGCTGTCAGTTGGTTCTCAGGTGCTACTTTTAGGTCAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: WLTSFFFPLLGAGGL*AVSWFSGATFRSEQ Trigger: CTGTTCTGACCTAAAAGTAGCACCTGAGAACCAACTGACAGCTCAGAGTCCTCCCGCTCCTAGGAGAGGAAAGAAGAAGGACGTTAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | TGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTCTGACGTCTTGGAGTTaGAAGTGGAGGTTTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CRLLFSAAGTRRCTVLFLLTSWS*KWRFPL Trigger: AAGGGGAAACCTCCACTTCAAACTCCAAGACGTCAG...AAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTATCATTCTCAGGCTCTaGAAAGGCAACTGCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSIILRL*KGNCMD Trigger: GTCCATGCAGTTGCCTTTCAAGAGCCTGAGAATGAT...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | TGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTTGGCCACAGACTCTTaGTGGTCTGCTGTAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: CRLLFSAAGTRRCTVLFLLATDS*WSAVSM Trigger: CATACTTACAGCAGACCACAAAGAGTCTGTGGCCAA...AAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGCAGATGGCAAATCTGTAACGCGCTCCTGATTATGGGGTTCCCTGTGTTGGCCACAGACTCTTaGTGGTCTGCTGTAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: SHSRWQICNALLIMGFPVLATDS*WSAVSM Trigger: CATACTTACAGCAGACCACAAAGAGTCTGTGGCCAA...CACAGGGAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTGGTAAAGTCTCTACCTaGTGGGATTCTTGGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSGKVST*WDSWSA Trigger: TGCTGACCAAGAATCCCACAAGGTAGAGACTTTACC...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTCACACAGGTTTTTCCTaGGTCGCTTTCGGTAACATA | + |
|
Preference number: 5 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSHTGFS*VAFGNI Trigger: TATGTTACCGAAAGCGACCAAGGAAAAACCTGTGTG...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTCTTTCTTCTGAGGACTaGTCTGTTCCTTACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSLSSED*SVPYQL Trigger: CAACTGGTAAGGAACAGACAAGTCCTCAGAAGAAAG...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | ATGGGAAGTCTAAACCTTGTCGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTAGAAGCTTGGAAGTATaGGATATACTTTTCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MGSLNLVGSSSQQQAHVGRSLEV*DILFCL Trigger: CAGGCAGAAAAGTATATCCAATACTTCCAAGCTTCT...ACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCGACAAGGTTTAGACTTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR CAA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACATCCCCTTCACTATCTaGTGTGGACTGAACAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYIPFTI*CGLNSP Trigger: TGGGCTGTTCAGTCCACACAAGATAGTGAAGGGGAT...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACGAGGAAGATGCTGGCTaGGGAGACACAAAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVPFLFSDICSHSSILCNEEDAG*GDTKTA Trigger: TGCTGTTTTTGTGTCTCCCAAGCCAGCATCTTCCTC...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACTACCTTGTGGGATTCTaGGTCAGCAGTCACAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYYLVGF*VSSHSR Trigger: TCTGCTGTGACTGCTGACCAAGAATCCCACAAGGTA...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS TCA 90 bp | TGGACTCGCCAAGGGAGAAACCAGCTTAATTTCTACAGGAGGAGGTaGCCAAGAACTTCCTTTTCCTGTGTTTCTGCTTGCTCTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WTRQGRNQLNFYRRR*PRTSFSCVSACSCL Trigger: AAGACAAGAGCAAGCAGAAACACAGGAAAAGGAAGTTCTTGGTCACCTCCTCCTGTAGAAATTAAGCTGGTTTCTCCCTTGGCGAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | GTCCGATCTCGGCACAGGCACTCTCCCCATTTTCTCATTATCCATGATGCTACTAAGACTGTACTAAGGTaGCTAAGCAGTAAATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRSRHRHSPHFLIIHDATKTVLR*LSSKWH Trigger: GTGCCATTTACTGCTTAGCAACCTTAGTACAGTCTT...AGTAGCATCATGGATAATGAGAAAATGGGGAGAGTGCCTGTGCCGAGATCGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCTGGGTGACCATGTGCTaGTTGCTCAAGTCCACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NHMPTIQIQHSIRQSPMSWVTMC*LLKSTS Trigger: ACTGGTGGACTTGAGCAACAAGCACATGGTCACCCA...GCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AGTCACAGCAGATGGCAAATCTGTAACGCGCTCCTGATTATGGGGTTCCCTGTGAACCAACGTTCTCCTTaGGTACATGAGCTTCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: SHSRWQICNALLIMGFPVNQRSP*VHELLF Trigger: AAATAGAAGCTCATGTACCAAAGGAGAACGTTGGTT...CACAGGGAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTTCCTTTCCTCTTTTCCGACATCTGCTCACACTCTTCCATTCTCTGTAACTTTTCCTGCTTGCTCTaGTCTTCACAGTCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVPFLFSDICSHSSILCNFSCLL*SSQSCF Trigger: GAAGCAGGACTGTGAAGACAAGAGCAAGCAGGAAAA...GTTACAGAGAATGGAAGAGTGTGAGCAGATGTCGGAAAAGAGGAAAGGAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140489.2 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTAGATCTTGTGGGACTTaGTTGAATAAACTCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSRSCGT*LNKLQT Trigger: TGTTTGGAGTTTATTCAACAAAGTCCCACAAGATCT...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACGCTGCCTCACTCCCTTaGAGATCATCTAGAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYAASLP*RSSRIS Trigger: AGAAATTCTAGATGATCTCAAAGGGAGTGAGGCAGC...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCTCTTCTCAGCAGCAGGCACACGTCGGTGCACTGTTTTATTTCTTTCTGTCACTGTGTTCATCTaGTTTATACTCCATATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLFSAAGTRRCTVLFLSVTVFI*FILHIL Trigger: CAGAATATGGAGTATAAACAAGATGAACACAGTGAC...AGAAAGAAATAAAACAGTGCACCGACGTGTGCCTGCTGCTGAGAAGAGGAGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS TCA 90 bp | GTATCTTCTAAATTGGCATTCCTCAGCTCTGTGACAGTCCCGTCATaGCTTGCTGCCTCACTCCCTTTGAGATCATCTAGAATTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSSKLAFLSSVTVPS*LAASLPLRSSRISV Trigger: TACAGAAATTCTAGATGATCTCAAAGGGAGTGAGGCAGCAAGTCATGACGGGACTGTCACAGAGCTGAGGAATGCCAATTTAGAAGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | ACTACAAGAACTGCACTCCATGTGGAGTTACTCATTTACTGCTTACAAAATTGTCTGCTGCCACGGGAGTaGCTTCCTTACTTCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TTRTALHVELLIYCLQNCLLPRE*LPYFWC Trigger: ACACCAGAAGTAAGGAAGCAACTCCCGTGGCAGCAG...ACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGCCGCTGATGGATCTTTaGAGCTTTCCTCTGCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: QNHMPTIQIQHSIRQSPMPLMDL*SFPLQT Trigger: AGTCTGCAGAGGAAAGCTCAAAAGATCCATCAGCGG...CATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCTGTTTCTGCTTGCTCTaGTCTTCACAGTCCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NHMPTIQIQHSIRQSPMSCFCLL*SSQSCF Trigger: GAAGCAGGACTGTGAAGACAAGAGCAAGCAGAAACA...GCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS GCA 90 bp | TCTAGAAGAAACCATGTCATCATTCTGGCTGGTATTTACAGTCTCTaGATGTGGTTCCTTAACAGTCTTCGGTGTAGAGTTTGTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRNHVIILAGIYSL*MWFLNSLRCRVCQP Trigger: AGGCTGACAAACTCTACACCGAAGACTGTTAAGGAACCACATGCAGAGACTGTAAATACCAGCCAGAATGATGACATGGTTTCTTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACTCTTGTGGGACTTTGTaGAATAAACTCCAAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYSCGTL*NKLQTL Trigger: CAGTGTTTGGAGTTTATTCAACAAAGTCCCACAAGA...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCACGAATGTGCAGCCTTaGAGACTATCACTGCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTTNVQP*RLSLLR Trigger: ACGGAGCAGTGATAGTCTCAAAGGCTGCACATTCGT...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS TCA 90 bp | TTCTACAGACTTCTTAAGTCTTCTAGGGGTTCCCTTTCTAACAGATaGAAGCCTGACTTTTGTTCTAGAAGGAGTTTCTTCAGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FYRLLKSSRGSLSNR*KPDFCSRRSFFSCW Trigger: CCAGCAGCTGAAGAAACTCCTTCTAGAACAAAAGTCAGGCTTTCATCTGTTAGAAAGGGAACCCCTAGAAGACTTAAGAAGTCTGTAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | GCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGCACAGGTACTTCTCTGGGATGTATTaGAAATTGGAGTTCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: AHNSNSTQYQAKPNEHRYFSGMY*KLEFQQ Trigger: TTGTTGGAACTCCAATTTCAAATACATCCCAGAGAA...GTACCTGTGCTCATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCACTCTGAGCTGTCAGTaGGTTCTCAGGTGCTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTTLSCQ*VLRCYF Trigger: AAAGTAGCACCTGAGAACCAACTGACAGCTCAGAGT...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTCAATAGTACTGAGATTATACTCAAGTTTCTCTGCCCCTAAGGGATACAAGAAGGAATGGTCCTaGCATTTACATGAATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CCSIVLRLYSSFSAPKGYKKEWS*HLHESR Trigger: ACGAGATTCATGTAAATGCAAGGACCATTCCTTCTT...GTATCCCTTAGGGGCAGAGAAACTTGAGTATAATCTCAGTACTATTGAGCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAATAAAATCAGGCAGTAATTGTCAGCAAGGCAATGAGCATGGACTGACCGGGATGTATTTGAAATaGGAGTTCCAACAAACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLIKSGSNCQQGNEHGLTGMYLK*EFQQTP Trigger: AGGCGTTTGTTGGAACTCCAATTTCAAATACATCCC...GGTCAGTCCATGCTCATTGCCTTGCTGACAATTACTGCCTGATTTTATTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTCATTATCCATGATGCTACTCGGTAGAAAAATAACACACAAAGCACACTCTGTTCCTTACCAGTaGTGCCACCATCAGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: IFSLSMMLLGRKITHKAHSVPYQ*CHHQLL Trigger: TAGAAGCTGATGGTGGCACAACTGGTAAGGAACAGA...GTGTGCTTTGTGTGTTATTTTTCTACCGAGTAGCATCATGGATAATGAGAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | CAAAATCACATGCCCACAATTCAAATTCAACACAGTATCAGGCAAAGCCCAATGAGAAGCTTGGAAGTATaGGATATACTTTTCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QNHMPTIQIQHSIRQSPMRSLEV*DILFCL Trigger: CAGGCAGAAAAGTATATCCAATACTTCCAAGCTTCT...CATTGGGCTTTGCCTGATACTGTGTTGAATTTGAATTGTGGGCATGTGATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
||
| CDS-3UTR CAA 90 bp | ACTACAAGAACTGCACTCCATGTGGAGTTACTCATTTACTGCTTACAAAATTGTAACCAACGTTCTCCTTaGGTACATGAGCTTCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: TTRTALHVELLIYCLQNCNQRSP*VHELLF Trigger: AAATAGAAGCTCATGTACCAAAGGAGAACGTTGGTT...ACAATTTTGTAAGCAGTAAATGAGTAACTCCACATGGAGTGCAGTTCTTGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTCATTATCCATGATGCTACTCGGTAGAAAAATAACACACAAAGCACACGAGCAGCTTCCTTATTaGGCACTAAAACTGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFSLSMMLLGRKITHKAHEQLPY*ALKLIF Trigger: AAAAATCAGTTTTAGTGCCAAATAAGGAAGCTGCTC...GTGTGCTTTGTGTGTTATTTTTCTACCGAGTAGCATCATGGATAATGAGAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CCA 72 bp | GCAAGCAGTCCGTCCCTTCGGTCAGCGGACTCTGTGTaGGCTGCTCCACCCGCCAGGTCTGAGACTGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSPSLRSADSV*AAPPARSETAA Trigger: AGCGGCAGTCTCAGACCTGGCGGGTGGAGCAGCCCACACAGAGTCCGCTGACCGAAGGGACGGACTGCTTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS TCA 72 bp | GGCTGCGTTCTCAGCCTCAGTCTTCCCGGCGTACCCTaGGGTTCCGGCTCCGGCTCCACAGCACCAGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: GCVLSLSLPGVP*GSGSGSTAPEL Trigger: AAGTTCTGGTGCTGTGGAGCCGGAGCCGGAACCTCAGGGTACGCCGGGAAGACTGAGGCTGAGAACGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CCA 72 bp | CTGAGGTTCCGGCTCCGGCTCCACAGCACCAGAACTTaGCAGTGTGCCTTGGCTAACGTCCTTCTTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRFRLRLHSTRT*QCALANVLLLS Trigger: GGAAAGAAGAAGGACGTTAGCCAAGGCACACTGCCAAGTTCTGGTGCTGTGGAGCCGGAGCCGGAACCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CCA 72 bp | TGTTCTAGAAGGAGTTTCTTCAGCTGCTGGCTCGGGTaGCTGCGTTCTCAGCCTCAGTCTTCCCGGCGTACC | + |
|
Preference number: 6 (lower is better) Translates to: CSRRSFFSCWLG*LRSQPQSSRRT Trigger: GGTACGCCGGGAAGACTGAGGCTGAGAACGCAGCCACCCGAGCCAGCAGCTGAAGAAACTCCTTCTAGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS GCA 72 bp | GACTATCACTGCTCCGTCCTCATCACCAGCCTCACCTaGTGCCACGGGAGTTGCTTCCTTACTTCTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DYHCSVLITSLT*CHGSCFLTSGV Trigger: GACACCAGAAGTAAGGAAGCAACTCCCGTGGCAGCAGGTGAGGCTGGTGATGAGGACGGAGCAGTGATAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CCA 72 bp | TCCGGCTCCACAGCACCAGAACTTGGCAGTGTGCCTTaGCTAACGTCCTTCTTCTTTCCTCTCCTAGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGSTAPELGSVP*LTSFFFPLLGA Trigger: CGCTCCTAGGAGAGGAAAGAAGAAGGACGTTAGCCAAGGCACACTGCCAAGTTCTGGTGCTGTGGAGCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CAA 72 bp | TTTTGGCCGAGGCTGCGTTCAGAGGTAACCGGGCACTaGGAGCTGGTGGACCCAGAGCTTTCAACATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FWPRLRSEVTGH*ELVDPELSTSA Trigger: TGCAGATGTTGAAAGCTCTGGGTCCACCAGCTCCAAGTGCCCGGTTACCTCTGAACGCAGCCTCGGCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000125816.2 |
||
| CDS CAA 72 bp | CTCCGGCTCCACAGCACCAGAACTTGGCAGTGTGCCTaGGCTAACGTCCTTCTTCTTTCCTCTCCTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRLHSTRTWQCA*ANVLLLSSPRS Trigger: GCTCCTAGGAGAGGAAAGAAGAAGGACGTTAGCCAAGGCACACTGCCAAGTTCTGGTGCTGTGGAGCCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS GCA 72 bp | CAGAAGCCCCGAGTGGCAGAACCACAGAACCATGTGTaGGTACTGACAGAGAAGCTGGGTGACCATGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QKPRVAEPQNHV*VLTEKLGDHVL Trigger: AAGCACATGGTCACCCAGCTTCTCTGTCAGTACGCACACATGGTTCTGTGGTTCTGCCACTCGGGGCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS GCA 72 bp | GCACTTGGAGCTGGTGGACCCAGAGCTTTCAACATCTaGAACCGTGTTGGCCACAGACTCTTTGTGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALGAGGPRAFNI*NRVGHRLFVVC Trigger: GCAGACCACAAAGAGTCTGTGGCCAACACGGTTGCAGATGTTGAAAGCTCTGGGTCCACCAGCTCCAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000125816.2 |
||
| CDS GCA 72 bp | TATCACTGCTCCGTCCTCATCACCAGCCTCACCTGCTaGCACGGGAGTTGCTTCCTTACTTCTGGTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YHCSVLITSLTC*HGSCFLTSGVF Trigger: AAAGACACCAGAAGTAAGGAAGCAACTCCCGTGGCAGCAGGTGAGGCTGGTGATGAGGACGGAGCAGTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS GCA 72 bp | AAGCCTGACTTTTGTTCTAGAAGGAGTTTCTTCAGCTaGTGGCTCGGGTGGCTGCGTTCTCAGCCTCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KPDFCSRRSFFS*WLGWLRSQPQS Trigger: AGACTGAGGCTGAGAACGCAGCCACCCGAGCCAGCAGCTGAAGAAACTCCTTCTAGAACAAAAGTCAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CCA 72 bp | AGAGTAGAAATGGCTACTCCCAATGGGCTTACTAACTaGAAGCACAGGTGGCGCCCCTCTCTCATCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVEMATPNGLTN*KHRWRPSLITL Trigger: GAGAGTGATGAGAGAGGGGCGCCACCTGTGCTTCCAGTTAGTAAGCCCATTGGGAGTAGCCATTTCTACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS CAA 90 bp | GAGGTTCGGCTCTCAATAGGCACGATTCCATCCAGAACTGACGTCTaGGAGTTTGAAGTGGAGGTTTCCCCTTCACAGACTGACGACACA | + |
|
Preference number: 6 (lower is better) Translates to: EVRLSIGTIPSRTDV*EFEVEVSPSQTDDT Trigger: TGTGTCGTCAGTCTGTGAAGGGGAAACCTCCACTTCAAACTCCAAGACGTCAGTTCTGGATGGAATCGTGCCTATTGAGAGCCGAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
||
| CDS GCA 72 bp | ATCTGCAACCGTGTTGGCCACAGACTCTTTGTGGTCTaGTGTAAGTATGGAGGTTCGGCTCTCAATAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ICNRVGHRLFVV*CKYGGSALNRH Trigger: GTGCCTATTGAGAGCCGAACCTCCATACTTACAGCAGACCACAAAGAGTCTGTGGCCAACACGGTTGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000125816.2 |
||
| CDS CCA 72 bp | TGGAGTTCCAACAAACGCCTCAGGAAGCTCTGGGTGTaGGAAAGAGTGTACTACAGGAGATGGCTGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WSSNKRLRKLWV*ERVYYRRWLFC Trigger: ACAGAACAGCCATCTCCTGTAGTACACTCTTTCCCACACCCAGAGCTTCCTGAGGCGTTTGTTGGAACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000145968.3 |
||
| CDS TCA 72 bp | TGTGCTTGTTGCTCAAGTCCACCAGTCCTCTCTCAGTaGTACCCTGGGCCTCCATTGCAAAACAGCTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CACCSSPPVLSQ*YPGPPLQNSLR Trigger: TCTTAAGCTGTTTTGCAATGGAGGCCCAGGGTATCACTGAGAGAGGACTGGTGGACTTGAGCAACAAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CCA 72 bp | CGATTCCATCCAGAACTGACGTCTTGGAGTTTGAAGTaGAGGTTTCCCCTTCACAGACTGACGACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: RFHPELTSWSLK*RFPLHRLTTQQ Trigger: TTGCTGTGTCGTCAGTCTGTGAAGGGGAAACCTCCACTTCAAACTCCAAGACGTCAGTTCTGGATGGAATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CCA 72 bp | TACCTTGTGGGATTCTTGGTCAGCAGTCACAGCAGATaGCAAATCTGTAACGCGCTCCTGATTATGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: YLVGFLVSSHSR*QICNALLIMGF Trigger: GAACCCCATAATCAGGAGCGCGTTACAGATTTGCCATCTGCTGTGACTGCTGACCAAGAATCCCACAAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CAA 72 bp | CTTTCAACATCTGCAACCGTGTTGGCCACAGACTCTTaGTGGTCTGCTGTAAGTATGGAGGTTCGGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LSTSATVLATDS*WSAVSMEVRLS Trigger: TGAGAGCCGAACCTCCATACTTACAGCAGACCACAAAGAGTCTGTGGCCAACACGGTTGCAGATGTTGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000125816.2 |
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| CDS CAA 90 bp | CAACCGGAACATCTTTCTTCTGAGGACTTGTCTGTTCCTTACCAGTaGTGCCACCATCAGCTTCTAAGGGAACTACCTTCCTGGGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: QPEHLSSEDLSVPYQ*CHHQLLRELPSWVY Trigger: GTAGACCCAGGAAGGTAGTTCCCTTAGAAGCTGATGGTGGCACAACTGGTAAGGAACAGACAAGTCCTCAGAAGAAAGATGTTCCGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS TCA 72 bp | AAATTGGCATTCCTCAGCTCTGTGACAGTCCCGTCATaGCTTGCTGCCTCACTCCCTTTGAGATCATCTAGA | + |
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Preference number: 6 (lower is better) Translates to: KLAFLSSVTVPS*LAASLPLRSSR Trigger: TCTAGATGATCTCAAAGGGAGTGAGGCAGCAAGTCATGACGGGACTGTCACAGAGCTGAGGAATGCCAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CAA 72 bp | CTCTCAATAGGCACGATTCCATCCAGAACTGACGTCTaGGAGTTTGAAGTGGAGGTTTCCCCTTCACAGACT | + |
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Preference number: 6 (lower is better) Translates to: LSIGTIPSRTDV*EFEVEVSPSQT Trigger: AGTCTGTGAAGGGGAAACCTCCACTTCAAACTCCAAGACGTCAGTTCTGGATGGAATCGTGCCTATTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CAA 72 bp | ATCTCCGGACAACCGGAACATCTTTCTTCTGAGGACTaGTCTGTTCCTTACCAGTTGTGCCACCATCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: ISGQPEHLSSED*SVPYQLCHHQL Trigger: AAGCTGATGGTGGCACAACTGGTAAGGAACAGACAAGTCCTCAGAAGAAAGATGTTCCGGTTGTCCGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CAA 72 bp | CATCTTTCTTCTGAGGACTTGTCTGTTCCTTACCAGTaGTGCCACCATCAGCTTCTAAGGGAACTACCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HLSSEDLSVPYQ*CHHQLLRELPS Trigger: GGAAGGTAGTTCCCTTAGAAGCTGATGGTGGCACAACTGGTAAGGAACAGACAAGTCCTCAGAAGAAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CAA 72 bp | GGGTCACTCTCCAGTTCACCTAGAAGCTTGGAAGTATaGGATATACTTTTCTGCCTGGTTCTCAAGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSLSSSPRSLEV*DILFCLVLKAG Trigger: TCCTGCCTTGAGAACCAGGCAGAAAAGTATATCCAATACTTCCAAGCTTCTAGGTGAACTGGAGAGTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| CDS CAA 90 bp | AATGGTTTAGGGTCACTCTCCAGTTCACCTAGAAGCTTGGAAGTATaGGATATACTTTTCTGCCTGGTTCTCAAGGCAGGAGGGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: NGLGSLSSSPRSLEV*DILFCLVLKAGGET Trigger: TGTTTCCCCTCCTGCCTTGAGAACCAGGCAGAAAAGTATATCCAATACTTCCAAGCTTCTAGGTGAACTGGAGAGTGACCCTAAACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| CDS TCA 72 bp | AGGAGATGGCTGTTCTGTTTTAGGACTGTTAAAAAGTaGGACGCCATTTCTAGGCTCATGACTTGCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: RRWLFCFRTVKK*DAISRLMTCPH Trigger: GTGTGGGCAAGTCATGAGCCTAGAAATGGCGTCTCACTTTTTAACAGTCCTAAAACAGAACAGCCATCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000145968.3 |
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| CDS TCA 72 bp | CCGATCTTTCCCGCAATCGAGGGTCACGATCACTCATaGGATTATTCTTCAGAATCTGGTTTAGTTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PIFPAIEGHDHS*DYSSESGLVSR Trigger: CCTTGAAACTAAACCAGATTCTGAAGAATAATCTCATGAGTGATCGTGACCCTCGATTGCGGGAAAGATCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS GCA 72 bp | TCACCTAGAAGCTTGGAAGTATTGGATATACTTTTCTaGCTGGTTCTCAAGGCAGGAGGGGAAACAACAAAC | + |
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Preference number: 6 (lower is better) Translates to: SPRSLEVLDILF*LVLKAGGETTN Trigger: GTTTGTTGTTTCCCCTCCTGCCTTGAGAACCAGGCAGAAAAGTATATCCAATACTTCCAAGCTTCTAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| CDS CCA 72 bp | GTCATCATTCTGGCTGGTATTTACAGTCTCTGCATGTaGTTCCTTAACAGTCTTCGGTGTAGAGTTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: VIILAGIYSLCM*FLNSLRCRVCQ Trigger: CTGACAAACTCTACACCGAAGACTGTTAAGGAACCACATGCAGAGACTGTAAATACCAGCCAGAATGATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS CCA 72 bp | CTAGAAGCTTGGAAGTATTGGATATACTTTTCTGCCTaGTTCTCAAGGCAGGAGGGGAAACAACAAACTGAG | + |
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Preference number: 6 (lower is better) Translates to: LEAWKYWIYFSA*FSRQEGKQQTE Trigger: CTCAGTTTGTTGTTTCCCCTCCTGCCTTGAGAACCAGGCAGAAAAGTATATCCAATACTTCCAAGCTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| CDS CCA 72 bp | AGTACCTCTCTTGCAAGGGTTTGGTGGAAGAAGGAATaGTCCTTGCATTTACATGAATCTCGTGAGTATCAG | + |
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Preference number: 6 (lower is better) Translates to: STSLARVWWKKE*SLHLHESREYQ Trigger: CTGATACTCACGAGATTCATGTAAATGCAAGGACCATTCCTTCTTCCACCAAACCCTTGCAAGAGAGGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125816.2 |
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| CDS CAA 90 bp | ATGATCTCTAATGGTTTAGGGTCACTCTCCAGTTCACCTAGAAGCTaGGAAGTATTGGATATACTTTTCTGCCTGGTTCTCAAGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: MISNGLGSLSSSPRS*EVLDILFCLVLKAG Trigger: TCCTGCCTTGAGAACCAGGCAGAAAAGTATATCCAATACTTCCAAGCTTCTAGGTGAACTGGAGAGTGACCCTAAACCATTAGAGATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027768.14 ENSMUST00000140489.2 |
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| CDS TCA 72 bp | CTTCTTAAGTCTTCTAGGGGTTCCCTTTCTAACAGATaGAAGCCTGACTTTTGTTCTAGAAGGAGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLKSSRGSLSNR*KPDFCSRRSFF Trigger: GAAGAAACTCCTTCTAGAACAAAAGTCAGGCTTTCATCTGTTAGAAAGGGAACCCCTAGAAGACTTAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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| CDS TCA 72 bp | TGGTCACTGTGTTCATCTTGTTTATACTCCATATTCTaGGTATCTTCTAAATTGGCATTCCTCAGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: WSLCSSCLYSIF*VSSKLAFLSSV Trigger: CACAGAGCTGAGGAATGCCAATTTAGAAGATACTCAGAATATGGAGTATAAACAAGATGAACACAGTGACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027768.14 |
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