Pregenerated sensors for AGXT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089678Ensembl transcript IDs: ENSMUST00000022858.8, ENSMUST00000110541.8, ENSMUST00000110542.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGACTCCAAGGATGCTTCTAAGAAACATGTCTTCAATTGGTCTTaGATAAGTCCGATCAAGGCCTTGTTAATGGCAGGCTTTATATTA | + |
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Preference number: 1 (lower is better) Translates to: ADSKDASKKHVFNWS*ISPIKALLMAGFIL Trigger: TAATATAAAGCCTGCCATTAACAAGGCCTTGATCGGACTTATTCAAGACCAATTGAAGACATGTTTCTTAGAAGCATCCTTGGAGTCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
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| 3UTR CCA 90 bp | ACTAATTTTGATGTTCGCCCAGAAGCAACTTTCTCAAGGGCTTCGTaGATGATGGCTTCAGAAAGAATAAAGATTGTTACATATCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: TNFDVRPEATFSRAS*MMASERIKIVTYLD Trigger: ATCCAGATATGTAACAATCTTTATTCTTTCTGAAGCCATCATCCACGAAGCCCTTGAGAAAGTTGCTTCTGGGCGAACATCAAAATTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
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| 3UTR-3UTR TCA 90 bp | TACCAACCACTCAGCTTCCGACCACTTTCCAGATGTAGCATAGTGACTAGGCTTATGCCTGGTGTGAAGTaGGAAACCCCATCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: YQPLSFRPLSRCSIVTRLMPGVK*ETPSFS Trigger: GGAAAATGATGGGGTTTCTCACTTCACACCAGGCAT...AAGCCTAGTCACTATGCTACATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR-3UTR TCA 90 bp | CATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGTAGCATAGTGACTAGGGATAGATACTTCCCCTaGAGGATGGAATTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HYQPLSFRPLSRCSIVTRDRYFP*RMEFSG Trigger: TCCTGAGAATTCCATCCTTCAGGGGAAGTATCTATC...CCTAGTCACTATGCTACATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTACTTCCCCTGAAGGATaGAATTCTCAGGAGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: PDAWCEVRNPIIFHTISSTSPEG*NSQENG Trigger: CCCATTCTCCTGAGAATTCCATCCTTCAGGGGAAGT...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGAAGAGGCATTTGAGCTaGAGCCTGAAGAAATGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMKRHLS*SLKKCF Trigger: GAAACATTTCTTCAGGCTTCAGCTCAAATGCCTCTT...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTTTCCTTCACGACTCATaGGAGACACATATACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PDAWCEVRNPIIFHTISSFLHDS*ETHILC Trigger: ACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAA...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGATGGACATAGCATGGGAACACAGAAAGCAGTGACAGACTTAATTGATAGAGTCTTCAATTGGTCTTaGATAAGTCCGATCAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KDGHSMGTQKAVTDLIDRVFNWS*ISPIKA Trigger: GGCCTTGATCGGACTTATTCAAGACCAATTGAAGAC...TCTATCAATTAAGTCTGTCACTGCTTTCTGTGTTCCCATGCTATGTCCATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCTAATCTACACAAACTaGGACTTACTCTGTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QKEFPSRLMGDTYTVYSNLIYTN*DLLCEP Trigger: TGGCTCACAGAGTAAGTCTCAGTTTGTGTAGATTAG...GTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR CCA 72 bp | CTCTGTGAGCCAGTGATAGATACTTCCCCTGAAGGATaGAATTCTCAGGAGAATGGGGGCTCCGTTGACAAA | + |
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Preference number: 3 (lower is better) Translates to: LCEPVIDTSPEG*NSQENGGSVDK Trigger: TTTGTCAACGGAGCCCCCATTCTCCTGAGAATTCCATCCTTCAGGGGAAGTATCTATCACTGGCTCACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR TCA 72 bp | CTAGGCTTTATCTTCATGGCTTCCAGATGCCTGGTGTaGAGTGAGAAACCCCATCATTTTCCACACAATTTC | + |
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Preference number: 3 (lower is better) Translates to: LGFIFMASRCLV*SEKPHHFPHNF Trigger: GAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGGAAGCCATGAAGATAAAGCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| 3UTR CCA 72 bp | GATGTTCGCCCAGAAGCAACTTTCTCAAGGGCTTCGTaGATGATGGCTTCAGAAAGAATAAAGATTGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: DVRPEATFSRAS*MMASERIKIVT Trigger: TGTAACAATCTTTATTCTTTCTGAAGCCATCATCCACGAAGCCCTTGAGAAAGTTGCTTCTGGGCGAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
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| 3UTR TCA 72 bp | AAGGATGCTTCTAAGAAACATGTCTTCAATTGGTCTTaGATAAGTCCGATCAAGGCCTTGTTAATGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: KDASKKHVFNWS*ISPIKALLMAG Trigger: GCCTGCCATTAACAAGGCCTTGATCGGACTTATTCAAGACCAATTGAAGACATGTTTCTTAGAAGCATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
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| CDS-3UTR GCA 90 bp | CATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGTAGCATAGTGACTAGGAGTGAGAGCCCAGCCTaGCAAAGCCTGTCTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: HYQPLSFRPLSRCSIVTRSESPA*QSLSAL Trigger: AAGTGCAGACAGGCTTTGGCAGGCTGGGCTCTCACT...CCTAGTCACTATGCTACATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTTGTCTGCACTTCATCTaGGATGCACACACCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSCLHFI*DAHTSP Trigger: CGGGGAGGTGTGTGCATCGCAGATGAAGTGCAGACA...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGAGTCTGGAGCACAGCTaGAGTCCCTCACTGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMSLEHS*SPSLFA Trigger: TGCAAACAGTGAGGGACTGCAGCTGTGCTCCAGACT...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | TACCAACCACTCAGCTTCCGACCACTTTCCAGATGTAGCATAGTGACTAGGCTTCCATGGCCAGGTCGTTaGCTTCTGATCCACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YQPLSFRPLSRCSIVTRLPWPGR*LLIHCS Trigger: TGAACAGTGGATCAGAAGCCAACGACCTGGCCATGG...AAGCCTAGTCACTATGCTACATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGGGAGAATCTCGACAATaGATTCCTCCCCAAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMGESRQ*IPPQGP Trigger: TGGCCCTTGGGGAGGAATCCATTGTCGAGATTCTCC...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTGATATGATGTCTGTGTaGTTCGAGTGTGCTCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSDMMSV*FECARA Trigger: GGCCCGAGCACACTCGAATCACACAGACATCATATC...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | CATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGTAGCATAGTGACTAGGCGGCTTATCTTGTCTTaGACCATCTCTATCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HYQPLSFRPLSRCSIVTRRLILS*TISIPT Trigger: GGTGGGGATAGAGATGGTTCAAGACAAGATAAGCCG...CCTAGTCACTATGCTACATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTCTCGCCTTCCTCCCTaGCCATTTGGACCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRSRLPP*PFGPGA Trigger: TGCTCCAGGTCCAAATGGGCAGGGAGGAAGGCGAGA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGCACTTCATCTGCGATaGACACACCTCCCCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRALHLR*THLPAL Trigger: GAGAGCGGGGAGGTGTGTGCATCGCAGATGAAGTGC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGTCGCAATTTCTGGAGTaGTCACAACTGCAGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMSQFLE*SQLQPW Trigger: CCATGGCTGCAGTTGTGACCACTCCAGAAATTGCGA...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGCACAGCAGATCCAATaGCGCAGGCCAGGGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRAQQIQ*RRPGDF Trigger: GAAATCCCCTGGCCTGCGCCATTGGATCTGCTGTGC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGAAAGATGCTGCTTGTaGATCGCCAGCACACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRERCCL*IASTRL Trigger: CAGCCGTGTGCTGGCGATTCACAAGCAGCATCTTTC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTCTCAGGAAGGAGTGCTaGGAGCTTCTCTGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSLRKEC*ELLCIF Trigger: GAATATGCAGAGAAGCTCTCAGCACTCCTTCCTGAG...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTCAGGTCGTTGGCTTCTaGTCCACTGTTCACCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSQVVGF*STVHQE Trigger: TTCTTGGTGAACAGTGGATCAGAAGCCAACGACCTG...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGACCTGGAGCACAGCTaGAGTCCCTCACTGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRDLEHS*SPSLFA Trigger: TGCAAACAGTGAGGGACTGCAGCTGTGCTCCAGGTC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
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| CDS-3UTR GCA 90 bp | CAGAAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACGCACTTCATCTGCGATaGACACACCTCCCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QKEFPSRLMGDTYTVYSNALHLR*THLPAL Trigger: GAGAGCGGGGAGGTGTGTGCATCGCAGATGAAGTGC...GTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTGTCTGCACTTCATCTaGGATGCACACACCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRCLHFI*DAHTSP Trigger: CGGGGAGGTGTGTGCATCGCAGATGAAGTGCAGACA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTAGTGAGAGCCCAGCCTaGCAAAGCCTGTCTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRSESPA*QSLSAL Trigger: AAGTGCAGACAGGCTTTGGCAGGCTGGGCTCTCACT...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | CATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGTAGCATAGTGACTAGGAGACTTCGCAATTTCTaGAGTGGTCACAACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HYQPLSFRPLSRCSIVTRRLRNF*SGHNCS Trigger: GCTGCAGTTGTGACCACTCCAGAAATTGCGAAGTCT...CCTAGTCACTATGCTACATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGGCACAGCAGATCCAATaGCGCAGGCCAGGGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: KEFPSRLMGDTYTVYSNQAQQIQ*RRPGDF Trigger: GAAATCCCCTGGCCTGCGCCATTGGATCTGCTGTGC...CTGGTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | AAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGGAAAGATGCTGCTTGTaGATCGCCAGCACACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KEFPSRLMGDTYTVYSNQERCCL*IASTRL Trigger: CAGCCGTGTGCTGGCGATTCACAAGCAGCATCTTTC...CTGGTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGATATGATGTCTGTGTaGTTCGAGTGTGCTCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRDMMSV*FECARA Trigger: GGCCCGAGCACACTCGAATCACACAGACATCATATC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTCAGTCCCTCACTGTTTaGACTGGAGAATCTCGACAA | + |
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Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSQSLTV*TGESRQ Trigger: TTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTG...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR GCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTGGAGCCCCATGTCTTTaGAGTCCTCATGGATTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSGAPCL*SPHGFD Trigger: ATCAAATCCATGAGGACTGCAAAGACATGGGGCTCC...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCACTCCATGTGTCCCTaGTGGAGTAGCAAAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRHSMCP*WSSKGF Trigger: GAAGCCTTTGCTACTCCACCAGGGACACATGGAGTG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCCATGGCCAGGTCGTTaGCTTCTGATCCACTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRPWPGR*LLIHCS Trigger: TGAACAGTGGATCAGAAGCCAACGACCTGGCCATGG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGGAGAATCTCGACAATaGATTCCTCCCCAAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRGESRQ*IPPQGP Trigger: TGGCCCTTGGGGAGGAATCCATTGTCGAGATTCTCC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR CCA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGAACTCCTTTGGGTACTaGACAACACCATTCACACCT | + |
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Preference number: 4 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMNSFGY*TTPFTP Trigger: AGGTGTGAATGGTGTTGTCCAGTACCCAAAGGAGTT...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGCTTTGTATGAAGAGTaGGCTTGGGCACAGCTATCC | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRALYEE*AWAQLS Trigger: GGATAGCTGTGCCCAAGCTCACTCTTCATACAAAGC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCTGGTATTTCTCAGGTaGGAAGTCACACGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRLVFLR*EVTRWH Trigger: ATGCCACCGTGTGACTTCTCACCTGAGAAATACCAG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCTCAGGAAGGAGTGCTaGGAGCTTCTCTGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRLRKEC*ELLCIF Trigger: GAATATGCAGAGAAGCTCTCAGCACTCCTTCCTGAG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCAGGTCGTTGGCTTCTaGTCCACTGTTCACCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRQVVGF*STVHQE Trigger: TTCTTGGTGAACAGTGGATCAGAAGCCAACGACCTG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS-3UTR TCA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGCCAAATGTGCTGAAGTaGAGCAAACGTTTAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMPNVLK*SKRLAK Trigger: TTTGGCTAAACGTTTGCTTCACTTCAGCACATTTGG...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCGGCTTATCTTGTCTTaGACCATCTCTATCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRRLILS*TISIPT Trigger: GGTGGGGATAGAGATGGTTCAAGACAAGATAAGCCG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTCACAACTGCAGCCATaGGGAAGCCATTTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRSQLQP*GSHFQS Trigger: GGATTGGAAATGGCTTCCCCATGGCTGCAGTTGTGA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGTTGTCACAACTGCAGCCATaGGGAAGCCATTTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: EFPSRLMGDTYTVYSNQLSQLQP*GSHFQS Trigger: GGATTGGAAATGGCTTCCCCATGGCTGCAGTTGTGA...CAACTGGTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTCGCAATTTCTGGAGTaGTCACAACTGCAGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRSQFLE*SQLQPW Trigger: CCATGGCTGCAGTTGTGACCACTCCAGAAATTGCGA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTACCGTTCTTTAGCTTaGCAGCAGTCTGGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRYRSLA*QQSGAQ Trigger: CTGTGCTCCAGACTGCTGCCAAGCTAAAGAACGGTA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTATGCTGTGCTTTGTATaGAGAGTGAGCTTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRMLCFV*RVSLGT Trigger: TGTGCCCAAGCTCACTCTTCATACAAAGCACAGCAT...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCTGGTATTTCTCAGGTaGGAAGTCACACGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKEFPSRLMGDTYTVYSNLVFLR*EVTRWH Trigger: ATGCCACCGTGTGACTTCTCACCTGAGAAATACCAG...GTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | TTAACTATTACGCAGACTCCAAGGATGCTTCTAAGAAACATGTCTTCAATTGGTGAAAGATGCTGCTTGTaGATCGCCAGCACACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTITQTPRMLLRNMSSIGERCCL*IASTRL Trigger: CAGCCGTGTGCTGGCGATTCACAAGCAGCATCTTTC...ACCAATTGAAGACATGTTTCTTAGAAGCATCCTTGGAGTCTGCGTAATAGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTTTCTCTGCATATTCATaGATCGGAGAGTGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSFSAYS*IGEWKK Trigger: CTTCTTCCACTCTCCGATGCATGAATATGCAGAGAA...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCAGTCCCTCACTGTTTaGACTGGAGAATCTCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRQSLTV*TGESRQ Trigger: TTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGGAGCCCCATGTCTTTaGAGTCCTCATGGATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRGAPCL*SPHGFD Trigger: ATCAAATCCATGAGGACTGCAAAGACATGGGGCTCC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTAGGGATGGACGCATCTaGAGTATTCTGAGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRRDGRI*SILREV Trigger: GACTTCTCTCAGAATACTCCAGATGCGTCCATCCCT...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGACATAGCATGGGAACACAGAAAGCAGTGACAGACTTAATTGATAGACACTCCATGTGTCCCTaGTGGAGTAGCAAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDGHSMGTQKAVTDLIDRHSMCP*WSSKGF Trigger: GAAGCCTTTGCTACTCCACCAGGGACACATGGAGTG...TCTATCAATTAAGTCTGTCACTGCTTTCTGTGTTCCCATGCTATGTCCATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTAGACTTCGCAATTTCTaGAGTGGTCACAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRRLRNF*SGHNCS Trigger: GCTGCAGTTGTGACCACTCCAGAAATTGCGAAGTCT...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTCTTGAATAAGTCCGATCAAGGCCTTGTTAATGGCAGGCTTTATATTAGTTCAGAACTCACTGATTaGCAGCCTATCCCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLNKSDQGLVNGRLYISSELTD*QPIPPG Trigger: CCCTGGTGGGATAGGCTGCCAATCAGTGAGTTCTGA...ACTAATATAAAGCCTGCCATTAACAAGGCCTTGATCGGACTTATTCAAGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTTGAATAAGTCCGATCAAGGCCTTGTTAATGGCAGGCTTTATATTAGTGCTTTGTATGAAGAGTaGGCTTGGGCACAGCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLNKSDQGLVNGRLYISALYEE*AWAQLS Trigger: GGATAGCTGTGCCCAAGCTCACTCTTCATACAAAGC...ACTAATATAAAGCCTGCCATTAACAAGGCCTTGATCGGACTTATTCAAGACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTCAGCAGCATGTAGGTaGCAACTTCTTGACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRSAACR*QLLDCF Trigger: GAAACAGTCAAGAAGTTGGCACCTACATGCTGCTGA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGAGGGATGGACGCATCTaGAGTATTCTGAGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEFPSRLMGDTYTVYSNQRDGRI*SILREV Trigger: GACTTCTCTCAGAATACTCCAGATGCGTCCATCCCT...CTGGTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TTAACTATTACGCAGACTCCAAGGATGCTTCTAAGAAACATGTCTTCAATTGGTCCATGGCCAGGTCGTTaGCTTCTGATCCACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTITQTPRMLLRNMSSIGPWPGR*LLIHCS Trigger: TGAACAGTGGATCAGAAGCCAACGACCTGGCCATGG...ACCAATTGAAGACATGTTTCTTAGAAGCATCCTTGGAGTCTGCGTAATAGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCCTCACTGTTTGCACTaGAGAATCTCGACAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRPHCLH*RISTMD Trigger: ATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTATCCAGCAATTGATGTaGCCACAGAAGTGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRIQQLM*PQKCSV Trigger: CACTGAACACTTCTGTGGCCACATCAATTGCTGGAT...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTAACTCCTTTGGGTACTaGACAACACCATTCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRNSFGY*TTPFTP Trigger: AGGTGTGAATGGTGTTGTCCAGTACCCAAAGGAGTT...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGCATCTGGAGTATTCTaGGAGAAGTCTCCAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRASGVF*EKSPDK Trigger: TTTATCTGGAGACTTCTCTCAGAATACTCCAGATGC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | ACTATTACGCAGACTCCAAGGATGCTTCTAAGAAACATGTCTTCAATTGGTCTTATGCTGTGCTTTGTATaGAGAGTGAGCTTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TITQTPRMLLRNMSSIGLMLCFV*RVSLGT Trigger: TGTGCCCAAGCTCACTCTTCATACAAAGCACAGCAT...AAGACCAATTGAAGACATGTTTCTTAGAAGCATCCTTGGAGTCTGCGTAATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGATTGTTACATATCTGGATCTGAGGTTGAAAAGATGGACATAGCATGGGATATGATGTCTGTGTaGTTCGAGTGTGCTCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKDCYISGSEVEKMDIAWDMMSV*FECARA Trigger: GGCCCGAGCACACTCGAATCACACAGACATCATATC...CCATGCTATGTCCATCTTTTCAACCTCAGATCCAGATATGTAACAATCTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTTGTTCAGTGTGTCTTTaGATTGTTCGATATACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PDAWCEVRNPIIFHTISSCSVCL*IVRYTV Trigger: AACGGTATATCGAACAATTCAAAGACACACTGAACA...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCCAAATGTGCTGAAGTaGAGCAAACGTTTAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRPNVLK*SKRLAK Trigger: TTTGGCTAAACGTTTGCTTCACTTCAGCACATTTGG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTTCTCTGCATATTCATaGATCGGAGAGTGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRFSAYS*IGEWKK Trigger: CTTCTTCCACTCTCCGATGCATGAATATGCAGAGAA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACTCAGCAGCATGTAGGTaGCAACTTCTTGACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKEFPSRLMGDTYTVYSNSAACR*QLLDCF Trigger: GAAACAGTCAAGAAGTTGGCACCTACATGCTGCTGA...GTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTACCGTTCTTTAGCTTaGCAGCAGTCTGTAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRYRSLA*QQSVAK Trigger: TTTTGCTACAGACTGCTGCCAAGCTAAAGAACGGTA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCTTCAGAAACTCCTTTaGGTACTGGACAACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRLQKLL*VLDNTI Trigger: AATGGTGTTGTCCAGTACCCAAAGGAGTTTCTGAAG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGTTGCTTCAGAAACTCCTTTaGGTACTGGACAACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: EFPSRLMGDTYTVYSNQLLQKLL*VLDNTI Trigger: AATGGTGTTGTCCAGTACCCAAAGGAGTTTCTGAAG...CAACTGGTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGGCATCTGGAGTATTCTaGGAGAAGTCTCCAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEFPSRLMGDTYTVYSNQASGVF*EKSPDK Trigger: TTTATCTGGAGACTTCTCTCAGAATACTCCAGATGC...CTGGTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | ATCATTAACTATTACGCAGACTCCAAGGATGCTTCTAAGAAACATGTCTTCAATCTGGTATTTCTCAGGTaGGAAGTCACACGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IINYYADSKDASKKHVFNLVFLR*EVTRWH Trigger: ATGCCACCGTGTGACTTCTCACCTGAGAAATACCAG...ATTGAAGACATGTTTCTTAGAAGCATCCTTGGAGTCTGCGTAATAGTTAATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTCAAGTTTCTAATAGTCTCTCATCTCCCAGATTGTATGTACAAGCAAACCTCAGGAAGGAGTGCTaGGAGCTTCTCTGCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: CIQVSNSLSSPRLYVQANLRKEC*ELLCIF Trigger: GAATATGCAGAGAAGCTCTCAGCACTCCTTCCTGAG...GTTTGCTTGTACATACAATCTGGGAGATGAGAGACTATTAGAAACTTGAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR TCA 90 bp | GGAACACAGAAAGCAGTGACAGACTTAATTGATAGAAACTTTGTGTATTCAAGTCAGGTCGTTGGCTTCTaGTCCACTGTTCACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTQKAVTDLIDRNFVYSSQVVGF*STVHQE Trigger: TTCTTGGTGAACAGTGGATCAGAAGCCAACGACCTG...ACTTGAATACACAAAGTTTCTATCAATTAAGTCTGTCACTGCTTTCTGTGTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCAGTCCTCATGGATTTaGTTGACTTCTGTTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRQSSWI*LTSVLG Trigger: TCCTAAAACAGAAGTCAATCAAATCCATGAGGACTG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTGTTCAGTGTGTCTTTaGATTGTTCGATATACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRCSVCL*IVRYTV Trigger: AACGGTATATCGAACAATTCAAAGACACACTGAACA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGCAGTCCTCATGGATTTaGTTGACTTCTGTTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEFPSRLMGDTYTVYSNQQSSWI*LTSVLG Trigger: TCCTAAAACAGAAGTCAATCAAATCCATGAGGACTG...CTGGTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CCA 90 bp | TGTATTCAAGTTTCTAATAGTCTCTCATCTCCCAGATTGTATGTACAAGCAAACAGGGATGGACGCATCTaGAGTATTCTGAGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CIQVSNSLSSPRLYVQANRDGRI*SILREV Trigger: GACTTCTCTCAGAATACTCCAGATGCGTCCATCCCT...GTTTGCTTGTACATACAATCTGGGAGATGAGAGACTATTAGAAACTTGAATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR TCA 90 bp | TTAACTATTACGCAGACTCCAAGGATGCTTCTAAGAAACATGTCTTCAATTGGTGCATCTGGAGTATTCTaGGAGAAGTCTCCAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTITQTPRMLLRNMSSIGASGVF*EKSPDK Trigger: TTTATCTGGAGACTTCTCTCAGAATACTCCAGATGC...ACCAATTGAAGACATGTTTCTTAGAAGCATCCTTGGAGTCTGCGTAATAGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR GCA 90 bp | TTAACTATTACGCAGACTCCAAGGATGCTTCTAAGAAACATGTCTTCAATTGGTTTCTCTGCATATTCATaGATCGGAGAGTGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTITQTPRMLLRNMSSIGFSAYS*IGEWKK Trigger: CTTCTTCCACTCTCCGATGCATGAATATGCAGAGAA...ACCAATTGAAGACATGTTTCTTAGAAGCATCCTTGGAGTCTGCGTAATAGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS GCA 90 bp | TTAGCTTGGCAGCAGTCTGGAGCACAGCTGCAGTCCCTCACTGTTTaGACTGGAGAATCTCGACAATGGATTCCTCCCCAAGGGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: LAWQQSGAQLQSLTV*TGESRQWIPPQGPR Trigger: CCGTGGCCCTTGGGGAGGAATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTGCAGCTGTGCTCCAGACTGCTGCCAAGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS GCA 90 bp | GGCATTCTCGCCTTCCTCCCTGCCCATTTGGACCTGGAGCACAGCTaGAGTCCCTCACTGTTTGCACTGGAGAATCTCGACAATGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GILAFLPAHLDLEHS*SPSLFALENLDNGF Trigger: GAATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTGCAGCTGTGCTCCAGGTCCAAATGGGCAGGGAGGAAGGCGAGAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
||
| CDS TCA 90 bp | CAGGTGAGAAGTCACACGGTGGCATGCTGTGCTTTGTATGAAGAGTaGGCTTGGGCACAGCTATCCGGGAAGCACCTAAGCTCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QVRSHTVACCALYEE*AWAQLSGKHLSSGM Trigger: CATCCCTGAGCTTAGGTGCTTCCCGGATAGCTGTGCCCAAGCTCACTCTTCATACAAAGCACAGCATGCCACCGTGTGACTTCTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS TCA 90 bp | AATCGCCAGCACACGGCTGTAGGCCAGGGACTGGTATTTCTCAGGTaGGAAGTCACACGGTGGCATGCTGTGCTTTGTATGAAGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NRQHTAVGQGLVFLR*EVTRWHAVLCMKSE Trigger: CTCACTCTTCATACAAAGCACAGCATGCCACCGTGTGACTTCTCACCTGAGAAATACCAGTCCCTGGCCTACAGCCGTGTGCTGGCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS CCA 90 bp | GCACAGCTGCAGTCCCTCACTGTTTGCACTGGAGAATCTCGACAATaGATTCCTCCCCAAGGGCCACGGAAAACATCTGGGCACATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AQLQSLTVCTGESRQ*IPPQGPRKTSGHIV Trigger: AACAATGTGCCCAGATGTTTTCCGTGGCCCTTGGGGAGGAATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTGCAGCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS TCA 90 bp | ATTCGAGTGTGCTCGGGCCATCACCATGGCCAGGTCGTTGGCTTCTaGTCCACTGTTCACCAAGAAAATGACCTTAAGAGGCTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRVCSGHHHGQVVGF*STVHQENDLKRLRK Trigger: CTTCCTGAGCCTCTTAAGGTCATTTTCTTGGTGAACAGTGGATCAGAAGCCAACGACCTGGCCATGGTGATGGCCCGAGCACACTCGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS TCA 90 bp | TATTTCTCAGGTGAGAAGTCACACGGTGGCATGCTGTGCTTTGTATaGAGAGTGAGCTTGGGCACAGCTATCCGGGAAGCACCTAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YFSGEKSHGGMLCFV*RVSLGTAIREAPKL Trigger: GAGCTTAGGTGCTTCCCGGATAGCTGTGCCCAAGCTCACTCTTCATACAAAGCACAGCATGCCACCGTGTGACTTCTCACCTGAGAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS CCA 90 bp | TCCCCGCTCTCGGACCAACGCAAAGGCTTCCTTCAGAAACTCCTTTaGGTACTGGACAACACCATTCACACCTTGAATTGGCTCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPLSDQRKGFLQKLL*VLDNTIHTLNWLCK Trigger: TTTGCAGAGCCAATTCAAGGTGTGAATGGTGTTGTCCAGTACCCAAAGGAGTTTCTGAAGGAAGCCTTTGCGTTGGTCCGAGAGCGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS TCA 90 bp | GATCCAATGGCGCAGGCCAGGGGATTTCCTCCAAATGTGCTGAAGTaGAGCAAACGTTTAGCCAAAGACTTCGCAATTTCTGGAGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DPMAQARGFPPNVLK*SKRLAKDFAISGVV Trigger: GACCACTCCAGAAATTGCGAAGTCTTTGGCTAAACGTTTGCTTCACTTCAGCACATTTGGAGGAAATCCCCTGGCCTGCGCCATTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS GCA 90 bp | TTAAGAGGCTCAGGAAGGAGTGCTGAGAGCTTCTCTGCATATTCATaGATCGGAGAGTGGAAGAAGACAGAACTTGTATGCCACAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRGSGRSAESFSAYS*IGEWKKTELVCHRR Trigger: CCGCCTGTGGCATACAAGTTCTGTCTTCTTCCACTCTCCGATGCATGAATATGCAGAGAAGCTCTCAGCACTCCTTCCTGAGCCTCTTAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTTTCCTCCCTGCCCATTaGGACCTGGAGCACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRFLPAH*DLEHSC Trigger: GCAGCTGTGCTCCAGGTCCAAATGGGCAGGGAGGAA...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
||
| CDS TCA 90 bp | TCCGGGAAGCACCTAAGCTCAGGGATGGACGCATCTGGAGTATTCTaGGAGAAGTCTCCAGATAAAAGGGTTTCTGCAAATTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGKHLSSGMDASGVF*EKSPDKRVSANFSR Trigger: CCTGGAGAAATTTGCAGAAACCCTTTTATCTGGAGACTTCTCTCAGAATACTCCAGATGCGTCCATCCCTGAGCTTAGGTGCTTCCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS GCA 90 bp | CAAACGTTTAGCCAAAGACTTCGCAATTTCTGGAGTGGTCACAACTaGAGCCATGGGGAAGCCATTTCCAATCCCTTTAGCCATGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QTFSQRLRNFWSGHN*SHGEAISNPFSHGD Trigger: GTCACCATGGCTAAAGGGATTGGAAATGGCTTCCCCATGGCTGCAGTTGTGACCACTCCAGAAATTGCGAAGTCTTTGGCTAAACGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGGGAAGAAGACAGAACTaGTATGCCACAGGCGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMGRRQN*YATGGL Trigger: TAGACCGCCTGTGGCATACAAGTTCTGTCTTCTTCC...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTCATCTGGGCACATTGTaGATTGGCAGCCTATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PDAWCEVRNPIIFHTISSHLGTL*IGSLSH Trigger: GTGGGATAGGCTGCCAATCAACAATGTGCCCAGATG...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS CCA 90 bp | GGAAGGAGTGCTGAGAGCTTCTCTGCATATTCATGCATCGGAGAGTaGAAGAAGACAGAACTTGTATGCCACAGGCGGTCTATCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRSAESFSAYSCIGE*KKTELVCHRRSICF Trigger: AAAACAGATAGACCGCCTGTGGCATACAAGTTCTGTCTTCTTCCACTCTCCGATGCATGAATATGCAGAGAAGCTCTCAGCACTCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCATCTGGGCACATTGTaGATTGGCAGCCTATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRHLGTL*IGSLSH Trigger: GTGGGATAGGCTGCCAATCAACAATGTGCCCAGATG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGGAAGAAGACAGAACTaGTATGCCACAGGCGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRGRRQN*YATGGL Trigger: TAGACCGCCTGTGGCATACAAGTTCTGTCTTCTTCC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATGCCTGGTGTGAAGTGAGAAACCCCATCATTTTCCACACAATTTCCAGTGTAGGTGCCAACTTCTaGACTGTTTCTCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: PDAWCEVRNPIIFHTISSVGANF*TVSLEI Trigger: AATCTCCAGAGAAACAGTCAAGAAGTTGGCACCTAC...ACTGGAAATTGTGTGGAAAATGATGGGGTTTCTCACTTCACACCAGGCATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGTGACTCATTGACATTACCAACCACTCAGCTTCCGACCACTTTCCAGATGGCAGTCCTCATGGATTaGATTGACTTCTGTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSDSLTLPTTQLPTTFQMAVLMD*IDFCFR Trigger: CCTAAAACAGAAGTCAATCAAATCCATGAGGACTGC...CATCTGGAAAGTGGTCGGAAGCTGAGTGGTTGGTAATGTCAATGAGTCACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCCTTCAGAAACTCCTTaGGGTACTGGACAACACCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRPSETP*GTGQHH Trigger: ATGGTGTTGTCCAGTACCCAAAGGAGTTTCTGAAGG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACATACCGTTCTTTAGCTaGGCAGCAGTCTGGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QKEFPSRLMGDTYTVYSNIPFFS*AAVWST Trigger: TGTGCTCCAGACTGCTGCCAAGCTAAAGAACGGTAT...GTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTATACCGTTCTTTAGCTaGGCAGCAGTCTGTAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRIPFFS*AAVCSK Trigger: TTTGCTACAGACTGCTGCCAAGCTAAAGAACGGTAT...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCCTTCAGAAACTCCTTaGGGTACTGGACAACACCAT | + |
|
Preference number: 5 (lower is better) Translates to: QKEFPSRLMGDTYTVYSNPSETP*GTGQHH Trigger: ATGGTGTTGTCCAGTACCCAAAGGAGTTTCTGAAGG...GTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGTAGGTGCCAACTTCTaGACTGTTTCTCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRVGANF*TVSLEI Trigger: AATCTCCAGAGAAACAGTCAAGAAGTTGGCACCTAC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTGCAGTCCTCATGGATTaGATTGACTTCTGTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRAVLMD*IDFCFR Trigger: CCTAAAACAGAAGTCAATCAAATCCATGAGGACTGC...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | TGTATTCAAGTTTCTAATAGTCTCTCATCTCCCAGATTGTATGTACAAGCAAACGGAAGAAGACAGAACTaGTATGCCACAGGCGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CIQVSNSLSSPRLYVQANGRRQN*YATGGL Trigger: TAGACCGCCTGTGGCATACAAGTTCTGTCTTCTTCC...GTTTGCTTGTACATACAATCTGGGAGATGAGAGACTATTAGAAACTTGAATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110541.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTGGTTTTTCAACATTCCTCAAGTTCATCTCTGTACACAGGTGAGACGTCAGTGTGTCTTTGAATaGTTCGATATACCGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLWFFNIPQVHLCTQVRRQCVFE*FDIPFF Trigger: AAAGAACGGTATATCGAACAATTCAAAGACACACTG...ACGTCTCACCTGTGTACAGAGATGAACTTGAGGAATGTTGAAAAACCACAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGAGTTTCCTTCACGACTCATGGGAGACACATATACTGTGTATTCAAACCAGTGTGTCTTTGAATaGTTCGATATACCGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QKEFPSRLMGDTYTVYSNQCVFE*FDIPFF Trigger: AAAGAACGGTATATCGAACAATTCAAAGACACACTG...GTTTGAATACACAGTATATGTGTCTCCCATGAGTCGTGAAGGAAACTCTTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS CAA 90 bp | TTTAGCTTGGCAGCAGTCTGGAGCACAGCTGCAGTCCCTCACTGTTaGCACTGGAGAATCTCGACAATGGATTCCTCCCCAAGGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: FSLAAVWSTAAVPHC*HWRISTMDSSPRAT Trigger: CGTGGCCCTTGGGGAGGAATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTGCAGCTGTGCTCCAGACTGCTGCCAAGCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS CCA 72 bp | TGTCTGTGTGATTCGAGTGTGCTCGGGCCATCACCATaGCCAGGTCGTTGGCTTCTGATCCACTGTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: CLCDSSVLGPSP*PGRWLLIHCSP Trigger: TGGTGAACAGTGGATCAGAAGCCAACGACCTGGCCATGGTGATGGCCCGAGCACACTCGAATCACACAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS TCA 72 bp | AGTCACACGGTGGCATGCTGTGCTTTGTATGAAGAGTaGGCTTGGGCACAGCTATCCGGGAAGCACCTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SHTVACCALYEE*AWAQLSGKHLS Trigger: GCTTAGGTGCTTCCCGGATAGCTGTGCCCAAGCTCACTCTTCATACAAAGCACAGCATGCCACCGTGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS TCA 72 bp | GGTGAGAAGTCACACGGTGGCATGCTGTGCTTTGTATaGAGAGTGAGCTTGGGCACAGCTATCCGGGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GEKSHGGMLCFV*RVSLGTAIREA Trigger: TGCTTCCCGGATAGCTGTGCCCAAGCTCACTCTTCATACAAAGCACAGCATGCCACCGTGTGACTTCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS TCA 72 bp | CACACGGCTGTAGGCCAGGGACTGGTATTTCTCAGGTaGGAAGTCACACGGTGGCATGCTGTGCTTTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: HTAVGQGLVFLR*EVTRWHAVLCM Trigger: CATACAAAGCACAGCATGCCACCGTGTGACTTCTCACCTGAGAAATACCAGTCCCTGGCCTACAGCCGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS GCA 72 bp | CAGCAGTCTGGAGCACAGCTGCAGTCCCTCACTGTTTaGACTGGAGAATCTCGACAATGGATTCCTCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QQSGAQLQSLTV*TGESRQWIPPQ Trigger: TTGGGGAGGAATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTGCAGCTGTGCTCCAGACTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS CCA 72 bp | CAGTCCCTCACTGTTTGCACTGGAGAATCTCGACAATaGATTCCTCCCCAAGGGCCACGGAAAACATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSLTVCTGESRQ*IPPQGPRKTSG Trigger: CCCAGATGTTTTCCGTGGCCCTTGGGGAGGAATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS CAA 72 bp | TTCGAGTGTGCTCGGGCCATCACCATGGCCAGGTCGTaGGCTTCTGATCCACTGTTCACCAAGAAAATGACC | + |
|
Preference number: 6 (lower is better) Translates to: FECARAITMARS*ASDPLFTKKMT Trigger: GGTCATTTTCTTGGTGAACAGTGGATCAGAAGCCAACGACCTGGCCATGGTGATGGCCCGAGCACACTCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS CAA 90 bp | GGCAGCCTATCCCACCAGGGACTTCCATCTTGTAGATTCCGACATTaGTCAGGCCAAGTGTATAGGGACTGCATCCGTGATAGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSLSHQGLPSCRFRH*SGQVYRDCIRDRLL Trigger: GAGGAGCCTATCACGGATGCAGTCCCTATACACTTGGCCTGACAAATGTCGGAATCTACAAGATGGAAGTCCCTGGTGGGATAGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS GCA 72 bp | TTTGGACCTGGAGCACAGCTGCAGTCCCTCACTGTTTaGACTGGAGAATCTCGACAATGGATTCCTCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FGPGAQLQSLTV*TGESRQWIPPQ Trigger: TTGGGGAGGAATCCATTGTCGAGATTCTCCAGTGCAAACAGTGAGGGACTGCAGCTGTGCTCCAGGTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
||
| CDS GCA 72 bp | AGCCAAAGACTTCGCAATTTCTGGAGTGGTCACAACTaGAGCCATGGGGAAGCCATTTCCAATCCCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQRLRNFWSGHN*SHGEAISNPFS Trigger: GCTAAAGGGATTGGAAATGGCTTCCCCATGGCTGCAGTTGTGACCACTCCAGAAATTGCGAAGTCTTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS CAA 72 bp | TCCCACCAGGGACTTCCATCTTGTAGATTCCGACATTaGTCAGGCCAAGTGTATAGGGACTGCATCCGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SHQGLPSCRFRH*SGQVYRDCIRD Trigger: ATCACGGATGCAGTCCCTATACACTTGGCCTGACAAATGTCGGAATCTACAAGATGGAAGTCCCTGGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS CCA 72 bp | GTGAAGCAAACGTTTAGCCAAAGACTTCGCAATTTCTaGAGTGGTCACAACTGCAGCCATGGGGAAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: VKQTFSQRLRNF*SGHNCSHGEAI Trigger: AATGGCTTCCCCATGGCTGCAGTTGTGACCACTCCAGAAATTGCGAAGTCTTTGGCTAAACGTTTGCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS CCA 72 bp | GTGTCTTTGAATTGTTCGATATACCGTTCTTTAGCTTaGCAGCAGTCTGGAGCACAGCTGCAGTCCCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VSLNCSIYRSLA*QQSGAQLQSLT Trigger: AGTGAGGGACTGCAGCTGTGCTCCAGACTGCTGCCAAGCTAAAGAACGGTATATCGAACAATTCAAAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS CAA 72 bp | TGTGTCTTTGAATTGTTCGATATACCGTTCTTTAGCTaGGCAGCAGTCTGGAGCACAGCTGCAGTCCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CVFELFDIPFFS*AAVWSTAAVPH Trigger: GTGAGGGACTGCAGCTGTGCTCCAGACTGCTGCCAAGCTAAAGAACGGTATATCGAACAATTCAAAGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110542.8 |
||
| CDS GCA 72 bp | TCAGGAAGGAGTGCTGAGAGCTTCTCTGCATATTCATaGATCGGAGAGTGGAAGAAGACAGAACTTGTATGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRSAESFSAYS*IGEWKKTELVC Trigger: GCATACAAGTTCTGTCTTCTTCCACTCTCCGATGCATGAATATGCAGAGAAGCTCTCAGCACTCCTTCCTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
||
| CDS CAA 90 bp | TTGATTGACTTCTGTTTTAGGAAGAGGTTGTCGGCTTATCTTGTCTaGAACCATCTCTATCCCCACCATAAGGCCTTTGCCTCGGACATC | + |
|
Preference number: 6 (lower is better) Translates to: LIDFCFRKRLSAYLV*NHLYPHHKAFASDI Trigger: GATGTCCGAGGCAAAGGCCTTATGGTGGGGATAGAGATGGTTCAAGACAAGATAAGCCGACAACCTCTTCCTAAAACAGAAGTCAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
||
| CDS TCA 72 bp | CACCTAAGCTCAGGGATGGACGCATCTGGAGTATTCTaGGAGAAGTCTCCAGATAAAAGGGTTTCTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: HLSSGMDASGVF*EKSPDKRVSAN Trigger: ATTTGCAGAAACCCTTTTATCTGGAGACTTCTCTCAGAATACTCCAGATGCGTCCATCCCTGAGCTTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022858.8 ENSMUST00000110541.8 ENSMUST00000110542.8 |
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| CDS TCA 72 bp | TCTGTTTTAGGAAGAGGTTGTCGGCTTATCTTGTCTTaGACCATCTCTATCCCCACCATAAGGCCTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SVLGRGCRLILS*TISIPTIRPLP Trigger: AGGCAAAGGCCTTATGGTGGGGATAGAGATGGTTCAAGACAAGATAAGCCGACAACCTCTTCCTAAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS CAA 72 bp | CTTAGCAAACTTCAGCAGCATGTAGGTGCCAACTTCTaGACTGTTTCTCTGGAGATTTTCTTCTTCAATCAC | + |
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Preference number: 6 (lower is better) Translates to: LSKLQQHVGANF*TVSLEIFFFNH Trigger: GTGATTGAAGAAGAAAATCTCCAGAGAAACAGTCAAGAAGTTGGCACCTACATGCTGCTGAAGTTTGCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022858.8 ENSMUST00000110542.8 |
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| CDS CAA 72 bp | TGTGTCTTTGAATTGTTCGATATACCGTTCTTTAGCTaGGCAGCAGTCTGTAGCAAAACATACACACATACA | + |
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Preference number: 6 (lower is better) Translates to: CVFELFDIPFFS*AAVCSKTYTHT Trigger: TGTATGTGTGTATGTTTTGCTACAGACTGCTGCCAAGCTAAAGAACGGTATATCGAACAATTCAAAGACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022858.8 |
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