Pregenerated sensors for AGTRAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029007Ensembl transcript IDs: ENSMUST00000030865.9
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTGAGAGCAGCTGGTTaGAGAGCCCCGTCCCACAAGCACAGCCTTCTGGACCCTGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: RGLVAQRQVPVRAAG*RAPSHKHSLLDPAW Trigger: CCAGGCAGGGTCCAGAAGGCTGTGCTTGTGGGACGGGGCTCTTCAACCAGCTGCTCTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | CCCGTCCCACAAGCACAGCCTTCTGGACCCTGCCTGGCCATCCTGTaGCCCACCAGCCTGTGTGCTCCTCTTGGCTTTCCAGTCAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: PVPQAQPSGPCLAIL*PTSLCAPLGFPVSG Trigger: GCCACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCCAGGCAGGGTCCAGAAGGCTGTGCTTGTGGGACGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CCA 90 bp | CCACTTCCTAACCACATGCTGGCCAGTGTTCCAGGCCAGCCTTCCTaGGGGGCTGCCCCTCCACTTAGACCCTCTCTAGCCCACTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: PLPNHMLASVPGQPS*GAAPPLRPSLAHCC Trigger: GCAGCAGTGGGCTAGAGAGGGTCTAAGTGGAGGGGCAGCCCCCCAGGAAGGCTGGCCTGGAACACTGGCCAGCATGTGGTTAGGAAGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | GCCTTCTGGACCCTGCCTGGCCATCCTGTGCCCCACCAGCCTGTGTaGTCCTCTTGGCTTTCCAGTCAGTGGCAACTACAGGGTACAGCC | + |
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Preference number: 1 (lower is better) Translates to: AFWTLPGHPVPHQPV*SSWLSSQWQLQGTA Trigger: GGCTGTACCCTGTAGTTGCCACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCCAGGCAGGGTCCAGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR TCA 90 bp | TTTCCAAACCACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTaGGAGCAGCTGGTTGAAGAGCCCCGTCCCACAAGCACAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: FPNHHGALWHKGRCP*EQLVEEPRPTSTAF Trigger: GAAGGCTGTGCTTGTGGGACGGGGCTCTTCAACCAGCTGCTCTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTGGTTTGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CCA 90 bp | ACCCTGCCTGGCCATCCTGTGCCCCACCAGCCTGTGTGCTCCTCTTaGCTTTCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCTA | + |
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Preference number: 1 (lower is better) Translates to: TLPGHPVPHQPVCSS*LSSQWQLQGTAPIL Trigger: TAGGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCCAGGCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | TTTTCACAGATGCTGTCACTCAGCCTCCCTGCCTGTCCACAGGTGTaGAGACAGTCCTTTCAGGACAGTCACCTCAGCCTGTGGTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: FSQMLSLSLPACPQV*RQSFQDSHLSLWFP Trigger: GGGGAACCACAGGCTGAGGTGACTGTCCTGAAAGGACTGTCTGCACACCTGTGGACAGGCAGGGAGGCTGAGTGACAGCATCTGTGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | AACTGCCCAGAAACAGGAGAAACACCCTGGGTTTTCCATCTTCCTTaGCGCAGGCCTCATGTTCCCTTCTCCCCCAAGGCCTCTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: NCPETGETPWVFHLP*RRPHVPFSPKASAV Trigger: GACTGCAGAGGCCTTGGGGGAGAAGGGAACATGAGGCCTGCGGCAAGGAAGATGGAAAACCCAGGGTGTTTCTCCTGTTTCTGGGCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | GCTGCCTCTAGGGCATGTCTCTTCTCTTCACCCACCTATTCTGCTTaGCTCGGGGCCTCTCCTCCATCAGCTGGAAGTTTGTCATCCACT | + |
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Preference number: 1 (lower is better) Translates to: AASRACLFSSPTYSA*LGASPPSAGSLSST Trigger: AGTGGATGACAAACTTCCAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAGGTGGGTGAAGAGAAGAGACATGCCCTAGAGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CCA 90 bp | GCTCTAGCCCAGGGGTTAACAGGTGTCTTGAAGGGAGGGGTAGCCTaGAGAATTAGGACTGGGCTCTTCTCCACTGAGAAGCTAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: ALAQGLTGVLKGGVA*RIRTGLFSTEKLEA Trigger: AGCCTCTAGCTTCTCAGTGGAGAAGAGCCCAGTCCTAATTCTCCAGGCTACCCCTCCCTTCAAGACACCTGTTAACCCCTGGGCTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CCA 90 bp | CAAGGTTCTCTGGTTGCAGAGAGGGCTGGACCTACAGGGCTGTTCTaGAGACTGAGTAGGGCACACCAGCAGTTTGGCAGACAGAACACT | + |
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Preference number: 1 (lower is better) Translates to: QGSLVAERAGPTGLF*RLSRAHQQFGRQNT Trigger: AGTGTTCTGTCTGCCAAACTGCTGGTGTGCCCTACTCAGTCTCCAGAACAGCCCTGTAGGTCCAGCCCTCTCTGCAACCAGAGAACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | TCTGTAGACCAGGCCTGGCCTCAATCTCTGACATTCACTTGCCTCTaGCTCCCGAGTGCTGGGATTAACCACCCACCAGGCAGGTTTTTA | + |
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Preference number: 1 (lower is better) Translates to: SVDQAWPQSLTFTCL*LPSAGINHPPGRFL Trigger: TAAAAACCTGCCTGGTGGGTGGTTAATCCCAGCACTCGGGAGGCAGAGGCAAGTGAATGTCAGAGATTGAGGCCAGGCCTGGTCTACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | TACAGCCCCAATCCTACTGTTAGTATTCCTGGCTTCTCTCTTCGGTaGATCAGCAGTTCCCGCAGGCCCACCTTCAGAGTGTGTCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: YSPNPTVSIPGFSLR*ISSSRRPTFRVCPG Trigger: TCCTGGACACACTCTGAAGGTGGGCCTGCGGGAACTGCTGATGCACCGAAGAGAGAAGCCAGGAATACTAACAGTAGGATTGGGGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CCA 90 bp | GCCTTCCTTCTGCCTAGAAACTGCCCAGAAACAGGAGAAACACCCTaGGTTTTCCATCTTCCTTGCCGCAGGCCTCATGTTCCCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: AFLLPRNCPETGETP*VFHLPCRRPHVPFS Trigger: GGAGAAGGGAACATGAGGCCTGCGGCAAGGAAGATGGAAAACCCAGGGTGTTTCTCCTGTTTCTGGGCAGTTTCTAGGCAGAAGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR TCA 90 bp | CAGATTGTCACGCTAAGTAGTAGACTGACTCCTTTCACCTGCTGCTaGGCCTCGTCTCTGGGCCCCGGCTCATGTTTTATACTGTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: QIVTLSSRLTPFTCC*ASSLGPGSCFILCC Trigger: GCAGCACAGTATAAAACATGAGCCGGGGCCCAGAGACGAGGCTCAGCAGCAGGTGAAAGGAGTCAGTCTACTACTTAGCGTGACAATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR TCA 90 bp | CTCCTCCATCAGCTGGAAGTTTGTCATCCACTGTGGGACAGCCATTaGCCAATGAGAAAGCCCAGCTCCCCTGCTCTAGTCTGCTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: LLHQLEVCHPLWDSH*PMRKPSSPALVCFW Trigger: CCAAAAGCAGACTAGAGCAGGGGAGCTGGGCTTTCTCATTGGTCAATGGCTGTCCCACAGTGGATGACAAACTTCCAGCTGATGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | GCAGTCGACTGTGGTAAGAACGCAGGAGATAGAGGGAGTCACCCATaGCCTGCCTCATGGGTCAGTATCAGAGGCAGTGATAGTCACTTA | + |
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Preference number: 1 (lower is better) Translates to: AVDCGKNAGDRGSHP*PASWVSIRGSDSHL Trigger: TAAGTGACTATCACTGCCTCTGATACTGACCCATGAGGCAGGGCATGGGTGACTCCCTCTATCTCCTGCGTTCTTACCACAGTCGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | AGAGACACGGCACTGATACTCCAGGCCTTCCTTCTGCCTAGAAACTaGCCAGAAACAGGAGAAACACCCTGGGTTTTCCATCTTCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: RDTALILQAFLLPRN*PETGETPWVFHLPC Trigger: GCAAGGAAGATGGAAAACCCAGGGTGTTTCTCCTGTTTCTGGGCAGTTTCTAGGCAGAAGGAAGGCCTGGAGTATCAGTGCCGTGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR TCA 90 bp | TCGAACCCAGGTCATCAGACCTGGCAGTATGTACCCTCTACCCACTaGGCTATCTCAATGGCCCATCTTATCCCCACTTTTCAGAACAGG | + |
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Preference number: 1 (lower is better) Translates to: SNPGHQTWQYVPSTH*AISMAHLIPTFQNR Trigger: CCTGTTCTGAAAAGTGGGGATAAGATGGGCCATTGAGATAGCTCAGTGGGTAGAGGGTACATACTGCCAGGTCTGATGACCTGGGTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR TCA 90 bp | CTTATTCGTCTCTGCAAGCATGACCTATTCCAAGAGACACGGCACTaGTACTCCAGGCCTTCCTTCTGCCTAGAAACTGCCCAGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: LIRLCKHDLFQETRH*YSRPSFCLETAQKQ Trigger: CTGTTTCTGGGCAGTTTCTAGGCAGAAGGAAGGCCTGGAGTATCAGTGCCGTGTCTCTTGGAATAGGTCATGCTTGCAGAGACGAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | CTAGGGAGTATCAACCAGTCACATTCAGATTCGGATACCGATGCATaGTCTCTTGAGTTCTTACTCAGTGGAAGGCAGTCCCCATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LGSINQSHSDSDTDA*SLEFLLSGRQSPWW Trigger: CCACCATGGGGACTGCCTTCCACTGAGTAAGAACTCAAGAGAGCATGCATCGGTATCCGAATCTGAATGTGACTGGTTGATACTCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR TCA 90 bp | TTTAGTGACAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTaGAATTTAAAACAAGGTTCTCTGGTTGCAGAGAGGGCTGGACCT | + |
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Preference number: 1 (lower is better) Translates to: FSDKALPQQAISLVL*NLKQGSLVAERAGP Trigger: AGGTCCAGCCCTCTCTGCAACCAGAGAACCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTGTCACTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR TCA 90 bp | CACACACACACACACACGCCAAGTGCCATGGTGTTTATATGGAGGTaGGAAGTCTCTTCTTATACATGTCCTAGGACTCGAACCCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTPSAMVFIWR*EVSSYTCPRTRTQV Trigger: GACCTGGGTTCGAGTCCTAGGACATGTATAAGAAGAGACTTCTCACCTCCATATAAACACCATGGCACTTGGCGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR GCA 90 bp | AGGGTACCTTTAGATTTAATTACGTTTATTTGTGGAGGAGGCATGTaGCACAGTACTAACATGGAGGTCAGAGGACAACTTGCAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RVPLDLITFICGGGM*HSTNMEVRGQLAGV Trigger: GACTCCTGCAAGTTGTCCTCTGACCTCCATGTTAGTACTGTGGCACATGCCTCCTCCACAAATAAACGTAATTAAATCTAAAGGTACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CCA 90 bp | CCGAGTGCTGGGATTAACCACCCACCAGGCAGGTTTTTAATATTCTaGATTGTTTGTTTTTATCTATCTTTCTTTCTTTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PSAGINHPPGRFLIF*IVCFYLSFFLSLSL Trigger: GAGAGAGAGAGAAAGAAAGAAAGATAGATAAAAACAAACAATCCAGAATATTAAAAACCTGCCTGGTGGGTGGTTAATCCCAGCACTCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CAA 90 bp | GACCCTGCCTGGCCATCCTGTGCCCCACCAGCCTGTGTGCTCCTCTaGGCTTTCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCT | + |
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Preference number: 2 (lower is better) Translates to: DPAWPSCAPPACVLL*AFQSVATTGYSPNP Trigger: AGGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCCAGGCAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCACCTTCAGAGTGTGTCCAGGAGGTGACAGTTGTCACATTCCCACAGCCCCTTTCACCTGCTGCTaGGCCTCGTCTCTGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RPTFRVCPGGDSCHIPTAPFTCC*ASSLGP Trigger: GGGGCCCAGAGACGAGGCTCAGCAGCAGGTGAAAGG...GGCTGTGGGAATGTGACAACTGTCACCTCCTGGACACACTCTGAAGGTGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTTTCCAAACCACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTGAGGCTGGATCTGAGGGATaGAGGCTCTGGGACCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ACFQTTTGPCGTKAGAREAGSEG*RLWDLS Trigger: AGACAGGTCCCAGAGCCTGCATCCCTCAGATCCAGC...CTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTGGTTTGGAAACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTTTCCAAACCACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTGAGACAAGCACAGCCTTCTaGACCCTGCCTGGCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: ACFQTTTGPCGTKAGARETSTAF*TLPGHP Trigger: AGGATGGCCAGGCAGGGTCCAGAAGGCTGTGCTTGT...CTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTGGTTTGGAAACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTTTCCAAACCACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTGAGGAAGCTAGAGGCTCTTaGCCTCCAAGGGCACATGAC | + |
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Preference number: 2 (lower is better) Translates to: ACFQTTTGPCGTKAGAREEARGS*PPRAHD Trigger: GTCATGTGCCCTTGGAGGTCAAGAGCCTCTAGCTTC...CTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTGGTTTGGAAACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTTTCCAAACCACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTGAGCTCTGTGATAGGGAATaGCGGATGCCCCACTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: ACFQTTTGPCGTKAGARELCDRE*RMPHCR Trigger: CCTACAGTGGGGCATCCGCCATTCCCTATCACAGAG...CTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTGGTTTGGAAACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCACCTTCAGAGTGTGTCCAGGAGGTGACAGTTGTCACATTCCCACAGCCGTGATCACTAACCCATaGGGCCTGGCTGGCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RPTFRVCPGGDSCHIPTAVITNP*GLAGPE Trigger: CTCAGGGCCAGCCAGGCCTCATGGGTTAGTGATCAC...GGCTGTGGGAATGTGACAACTGTCACCTCCTGGACACACTCTGAAGGTGGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTCTTCACCCACCTATTCTGCTTGCCTCGGGGCCTCTCCTCCATCAGCTGCTTTGCAGAGCAGGCTaGGCGGGACCACAAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSLHPPILLASGPLLHQLLCRAG*AGPQAH Trigger: GTGAGCTTGTGGTCCCGCTCAGCCTGCTCTGCAAAG...CAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAGGTGGGTGAAGAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCCATCCTGTGCCCCACCAGCCTGTGTGCTCCTCTTGGCTTTCCAGTCAGTGTTAATGCCAGCACTCTaGGAGGGGCCTCTGAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: WPSCAPPACVLLLAFQSVLMPAL*EGPLKN Trigger: GTTCTTCAGAGGCCCCTCTCAGAGTGCTGGCATTAA...CACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCACCTTCAGAGTGTGTCCAGGAGGTGACAGTTGTCACATTCCCACAGCCGTCCACATGCCACACTaGCCGTTTGGCCACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: RPTFRVCPGGDSCHIPTAVHMPH*PFGHSQ Trigger: CTGACTGTGGCCAAACGGTCAGTGTGGCATGTGGAC...GGCTGTGGGAATGTGACAACTGTCACCTCCTGGACACACTCTGAAGGTGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTCCTCTTGGCTTTCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCCTAACCCATGAGGCCTaGCTGGCCCTGAGCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: CAPLGFPVSGNYRVQPQSLTHEA*LALSTL Trigger: CAGAGTGCTCAGGGCCAGCCAGGCCTCATGGGTTAG...GGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGAAAGCCAAGAGGAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCACCTTCAGAGTGTGTCCAGGAGGTGACAGTTGTCACATTCCCACAGCCGAGTCACCCATGCCCTaGCTCATGGGTCAGTATCAG | + |
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Preference number: 2 (lower is better) Translates to: RPTFRVCPGGDSCHIPTAESPMP*LMGQYQ Trigger: CTGATACTGACCCATGAGGCAGGGCATGGGTGACTC...GGCTGTGGGAATGTGACAACTGTCACCTCCTGGACACACTCTGAAGGTGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTGGCTTCTCTCTTCGGTGCATCAGCAGTTCCCGCAGGCCCACCTTCAGAAAAGCCCAGCTCCCCTaGTCTAGTCTGCTTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: IPGFSLRCISSSRRPTFRKAQLP*SSLLLG Trigger: CCCCAAAAGCAGACTAGAGCAGGGGAGCTGGGCTTT...TCTGAAGGTGGGCCTGCGGGAACTGCTGATGCACCGAAGAGAGAAGCCAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAATTTAAAACAAGGCCAGGCCAGCCTTCCTaGGGGGCTGCCCCTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: QGPSPTGHLTGPLKFKTRPGQPS*GAAPPL Trigger: AAGTGGAGGGGCAGCCCCCCAGGAAGGCTGGCCTGG...CCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CAA 90 bp | AAACTGCCCAGAAACAGGAGAAACACCCTGGGTTTTCCATCTTCCTaGCCGCAGGCCTCATGTTCCCTTCTCCCCCAAGGCCTCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: KLPRNRRNTLGFPSS*PQASCSLLPQGLCS Trigger: ACTGCAGAGGCCTTGGGGGAGAAGGGAACATGAGGCCTGCGGCAAGGAAGATGGAAAACCCAGGGTGTTTCTCCTGTTTCTGGGCAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTCGTCTCTGGGCCCCGGCTCATGTTTTATACTGTGCTGCATACAACCTATCAGACACCAAGTCATaGGGCCGTGACAGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: EPRLWAPAHVLYCAAYNLSDTKS*GRDRHR Trigger: CCTGTGCCTGTCACGGCCTCATGACTTGGTGTCTGA...TAGGTTGTATGCAGCACAGTATAAAACATGAGCCGGGGCCCAGAGACGAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTCGTCTCTGGGCCCCGGCTCATGTTTTATACTGTGCTGCATACAACCTAAGCAGGGTGGGTCTGTaGTTGGAGCTCAATCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: EPRLWAPAHVLYCAAYNLSRVGL*LELNRG Trigger: GCCACGATTGAGCTCCAAGCACAGACCCACCCTGCT...TAGGTTGTATGCAGCACAGTATAAAACATGAGCCGGGGCCCAGAGACGAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCCCTTCTCCCCCAAGGCCTCTGCAGTCAGGAACTTGACATGCATCCCAGAGTCTCTGACATTCACTTaGCTCTGCCTCCCGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VPFSPKASAVRNLTCIPESLTFT*LCLPSA Trigger: AGCACTCGGGAGGCAGAGGCAAGTGAATGTCAGAGA...CTCTGGGATGCATGTCAAGTTCCTGACTGCAGAGGCCTTGGGGGAGAAGGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTCTTCACCCACCTATTCTGCTTGCCTCGGGGCCTCTCCTCCATCAGCTGGTTTTCCATCTTCCTTaGCGCAGGCCTCATGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SSLHPPILLASGPLLHQLVFHLP*RRPHVP Trigger: GGGAACATGAGGCCTGCGGCAAGGAAGATGGAAAAC...CAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAGGTGGGTGAAGAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCACCTTCAGAGTGTGTCCAGGAGGTGACAGTTGTCACATTCCCACAGCCTACTGCATCCAGGCCTaGGGTTCTCAGACACCAAGT | + |
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Preference number: 2 (lower is better) Translates to: RPTFRVCPGGDSCHIPTAYCIQA*GSQTPS Trigger: ACTTGGTGTCTGAGAACCCCAGGCCTGGATGCAGTA...GGCTGTGGGAATGTGACAACTGTCACCTCCTGGACACACTCTGAAGGTGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCCATCCTGTGCCCCACCAGCCTGTGTGCTCCTCTTGGCTTTCCAGTCAGTGACAGGAGAAACACCCTaGGTTTTCCATCTTCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: WPSCAPPACVLLLAFQSVTGETP*VFHLPC Trigger: GCAAGGAAGATGGAAAACCCAGGGTGTTTCTCCTGT...CACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
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| 3UTR CAA 90 bp | ACCTATTCTGCTTGCCTCGGGGCCTCTCCTCCATCAGCTGGAAGTTaGTCATCCACTGTGGGACAGCCATTGACCAATGAGAAAGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TYSACLGASPPSAGS*SSTVGQPLTNEKAQ Trigger: CTGGGCTTTCTCATTGGTCAATGGCTGTCCCACAGTGGATGACAAACTTCCAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | CAACAAGCAAGCAATAGACTTGCAAACAGGACAAGAGACTTCAGCTCTGCAGGCGATGGTGTTCCACAGTaGCCCTGTCCAGAGGCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: QQASNRLANRTRDFSSAGDGVPQ*PCPEAG Trigger: CCCCGCCTCTGGACAGGGTCACTGTGGAACACCATC...GCCTGCAGAGCTGAAGTCTCTTGTCCTGTTTGCAAGTCTATTGCTTGCTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTAGGCTGAGCCCCTGCCTCACCTTATTCGTCTCTGCAAGCATGACCTATTCCCCTGGCCTCAATCTCTaGCATTCACTTGCCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LRLSPCLTLFVSASMTYSPGLNL*HSLASA Trigger: GGCAGAGGCAAGTGAATGTCAGAGATTGAGGCCAGG...GGAATAGGTCATGCTTGCAGAGACGAATAAGGTGAGGCAGGGGCTCAGCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCTCCTCTTGGCTTTCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCCTGTGTAGCCCTGGCTaGCCTGGAATTCACTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CAPLGFPVSGNYRVQPQSLCSPG*PGIHSV Trigger: TACAGAGTGAATTCCAGGTCAGCCAGGGCTACACAG...GGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGAAAGCCAAGAGGAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGGCTGAGCCCCTGCCTCACCTTATTCGTCTCTGCAAGCATGACCTATTCCCCATGCCCTGCCTCATaGGTCAGTATCAGAGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LRLSPCLTLFVSASMTYSPCPAS*VSIRGS Trigger: ACTGCCTCTGATACTGACCCATGAGGCAGGGCATGG...GGAATAGGTCATGCTTGCAGAGACGAATAAGGTGAGGCAGGGGCTCAGCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 90 bp | ACTCAAAGGCAAAAATCATACCAAGACAGCAGGGTGGGTCTGTGCTaGGAGCTCAATCGTGGCTCAGACACAGAGCAGCCACAGAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: TQRQKSYQDSRVGLC*ELNRGSDTEQPQNP Trigger: GGGGTTCTGTGGCTGCTCTGTGTCTGAGCCACGATTGAGCTCCAAGCACAGACCCACCCTGCTGTCTTGGTATGATTTTTGCCTTTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCCACAGTACTAACATGGAGGTCAGAGGACAACTTGCAGGAGTCAGTTCCACCACAGCCATTGACCAATaGGAAAGCCCAGCTCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CHSTNMEVRGQLAGVSSTTAIDQ*ESPAPL Trigger: CAGGGGAGCTGGGCTTTCTCATTGGTCAATGGCTGT...GGTGGAACTGACTCCTGCAAGTTGTCCTCTGACCTCCATGTTAGTACTGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR GCA 90 bp | CATATTTTAGTGACAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAGTCACTCAGCCTCCCTaGCTGTCCACAGGTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HILVTRPFPNRPSHWSFEVTQPP*LSTGVQ Trigger: CTGCACACCTGTGGACAGGCAGGGAGGCTGAGTGAC...TTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTGTCACTAAAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 90 bp | GAGGAGGCATGTGCCACAGTACTAACATGGAGGTCAGAGGACAACTaGCAGGAGTCAGTTCCACCCTATGGGACCCAGAGATCAAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: EEACATVLTWRSEDN*QESVPPYGTQRSNS Trigger: TGAGTTTGATCTCTGGGTCCCATAGGGTGGAACTGACTCCTGCAAGTTGTCCTCTGACCTCCATGTTAGTACTGTGGCACATGCCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCTACTGTTAGTATTCCTGCTGTGGGACAGCCATTaGCCAATGAGAAAGCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSQWQLQGTAPILLLVFLLWDSH*PMRKPS Trigger: GCTGGGCTTTCTCATTGGTCAATGGCTGTCCCACAG...CAGGAATACTAACAGTAGGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCTCGTCTCTGGGCCCCGGCTCATGTTTTATACTGTGCTGCATACAACCTAGGTTTTGTGAGAGGTTaGCTCACAACTACCTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: EPRLWAPAHVLYCAAYNLGFVRG*LTTTSL Trigger: GAGGGAGGTAGTTGTGAGGCAACCTCTCACAAAACC...TAGGTTGTATGCAGCACAGTATAAAACATGAGCCGGGGCCCAGAGACGAGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR GCA 90 bp | CAACAAGCAAGCAATAGACTTGCAAACAGGACAAGAGACTTCAGCTCTGCAGGCTTCACCCACCTATTCTaGTTGCCTCGGGGCCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QQASNRLANRTRDFSSAGFTHLF*LPRGLS Trigger: GGAGAGGCCCCGAGGCAAGCAGAATAGGTGGGTGAA...GCCTGCAGAGCTGAAGTCTCTTGTCCTGTTTGCAAGTCTATTGCTTGCTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCAGGCTCTTGACTCAAAGGCAAAAATCATACCAAGACAGCAGGGTGGGTCTGAACAAGAATCCTGCTaGGGACCAGGACGACCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HQALDSKAKIIPRQQGGSEQESC*GPGRPG Trigger: CCCTGGTCGTCCTGGTCCCCAGCAGGATTCTTGTTC...AGACCCACCCTGCTGTCTTGGTATGATTTTTGCCTTTGAGTCAAGAGCCTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CCA 90 bp | CATATTTTAGTGACAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAAGGCAGTCCCCATGGTaGCTCCCAACCTGCTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HILVTRPFPNRPSHWSFERQSPW*LPTCSS Trigger: AGAAGAGCAGGTTGGGAGCCACCATGGGGACTGCCT...TTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTGTCACTAAAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAGCAAGCAATAGACTTGCAAACAGGACAAGAGACTTCAGCTCTGCAGGCCTTGGAGCTCAATCGTaGCTCAGACACAGAGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QQASNRLANRTRDFSSAGLGAQS*LRHRAA Trigger: GGCTGCTCTGTGTCTGAGCCACGATTGAGCTCCAAG...GCCTGCAGAGCTGAAGTCTCTTGTCCTGTTTGCAAGTCTATTGCTTGCTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAGCAAGCAATAGACTTGCAAACAGGACAAGAGACTTCAGCTCTGCAGGCTTCCTAACCACATGCTaGCCAGTGTTCCAGGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QQASNRLANRTRDFSSAGFLTTC*PVFQAS Trigger: GCTGGCCTGGAACACTGGCCAGCATGTGGTTAGGAA...GCCTGCAGAGCTGAAGTCTCTTGTCCTGTTTGCAAGTCTATTGCTTGCTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCCACAGTACTAACATGGAGGTCAGAGGACAACTTGCAGGAGTCAGTTCCACCCAGCCACAGAACCCCTaGATTTTTAATGCCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: CHSTNMEVRGQLAGVSSTQPQNP*IFNAST Trigger: AGTGCTGGCATTAAAAATTCAGGGGTTCTGTGGCTG...GGTGGAACTGACTCCTGCAAGTTGTCCTCTGACCTCCATGTTAGTACTGTGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAATTTAAAACAAGGCTTAGCTACTTAGGCTaGGCCCCTGCCTCACCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: QGPSPTGHLTGPLKFKTRLSYLG*APASPY Trigger: ATAAGGTGAGGCAGGGGCTCAGCCTAAGTAGCTAAG...CCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCTACTGTTAGTATTCCTGCCCAACCTGCTCTTCTaGTATCTGACACTAAGCGCT | + |
|
Preference number: 2 (lower is better) Translates to: SSQWQLQGTAPILLLVFLPNLLF*YLTLSA Trigger: AGCGCTTAGTGTCAGATAGCAGAAGAGCAGGTTGGG...CAGGAATACTAACAGTAGGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCCACAGTACTAACATGGAGGTCAGAGGACAACTTGCAGGAGTCAGTTCCACCCTTCTGCCTAGAAACTaGCCAGAAACAGGAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: CHSTNMEVRGQLAGVSSTLLPRN*PETGET Trigger: TGTTTCTCCTGTTTCTGGGCAGTTTCTAGGCAGAAG...GGTGGAACTGACTCCTGCAAGTTGTCCTCTGACCTCCATGTTAGTACTGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAATTTAAAACAAGGCAGGTAAAGAAGGTTTaGACAAGAATCCTGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: QGPSPTGHLTGPLKFKTRQVKKV*TRILLG Trigger: CCCCAGCAGGATTCTTGTTCAAACCTTCTTTACCTG...CCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTCTGTTTGTGTGTAAAACCTCATACCATGACAAGAGTATGTGTGGAGGTCTCTAGTGGCACACGCTaGTCCTCACTCTGCTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: SLCLCVKPHTMTRVCVEVSSGTR*SSLCSH Trigger: GTGTGAGCAGAGTGAGGAGCAGCGTGTGCCACTAGA...GACCTCCACACATACTCTTGTCATGGTATGAGGTTTTACACACAAACAGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CCA 90 bp | CATATTTTAGTGACAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAACTCTCCTCCATCAGCTaGAAGTTTGTCATCCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: HILVTRPFPNRPSHWSFELSSIS*KFVIHC Trigger: ACAGTGGATGACAAACTTCCAGCTGATGGAGGAGAG...TTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTGTCACTAAAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR TCA 90 bp | CATATTTTAGTGACAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAACTTCCATCAGGCTCTTaGCTCAAAGGCAAAAATCAT | + |
|
Preference number: 2 (lower is better) Translates to: HILVTRPFPNRPSHWSFELPSGS*LKGKNH Trigger: ATGATTTTTGCCTTTGAGTCAAGAGCCTGATGGAAG...TTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTGTCACTAAAATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCTACTGTTAGTATTCCTGTGTTTTATACTGTGCTaGATACAACCTAAACAAACC | + |
|
Preference number: 2 (lower is better) Translates to: SSQWQLQGTAPILLLVFLCFILC*IQPKQT Trigger: GGTTTGTTTAGGTTGTATGCAGCACAGTATAAAACA...CAGGAATACTAACAGTAGGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | CATGGGGCAGCCCGAGCGGCAGTGATCACTAACCCATaGGGCCTGGCTGGCCCTGAGCACTCTGGGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HGAARAAVITNP*GLAGPEHSGQF Trigger: GAACTGCCCAGAGTGCTCAGGGCCAGCCAGGCCTCATGGGTTAGTGATCACTGCCGCTCGGGCTGCCCCATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | GAAGGGCTGATCACCATGGGGCAGCCCGAGCGGCAGTaGTCACTAACCCATGAGGCCTGGCTGGCCCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EGLITMGQPERQ*SLTHEAWLALS Trigger: GCTCAGGGCCAGCCAGGCCTCATGGGTTAGTGATCACTGCCGCTCGGGCTGCCCCATGGTGATCAGCCCTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | CACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTaGGAGCAGCTGGTTGAAGAGCCCCGTCCCACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HHGALWHKGRCP*EQLVEEPRPTS Trigger: GCTTGTGGGACGGGGCTCTTCAACCAGCTGCTCTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | AAGAGCCCCGTCCCACAAGCACAGCCTTCTGGACCCTaGCTGGCCATCCTGTGCCCCACCAGCCTGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KSPVPQAQPSGP*LAILCPTSLCA Trigger: AGCACACAGGCTGGTGGGGCACAGGATGGCCAGGCAGGGTCCAGAAGGCTGTGCTTGTGGGACGGGGCTCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | CTGGTTGAAGAGCCCCGTCCCACAAGCACAGCCTTCTaGACCCTGCCTGGCCATCCTGTGCCCCACCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVEEPRPTSTAF*TLPGHPVPHQP Trigger: AGGCTGGTGGGGCACAGGATGGCCAGGCAGGGTCCAGAAGGCTGTGCTTGTGGGACGGGGCTCTTCAACCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | GCGGGACCACAAGCTCACAGAGCTTCTAGGAAGGGCTaGTCACCATGGGGCAGCCCGAGCGGCAGTGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGPQAHRASRKG*SPWGSPSGSDH Trigger: GTGATCACTGCCGCTCGGGCTGCCCCATGGTGATCAGCCCTTCCTAGAAGCTCTGTGAGCTTGTGGTCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | GGCCATCCTGTGCCCCACCAGCCTGTGTGCTCCTCTTaGCTTTCCAGTCAGTGGCAACTACAGGGTACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GHPVPHQPVCSS*LSSQWQLQGTA Trigger: GGCTGTACCCTGTAGTTGCCACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCCTTCTCCCCCAAGGCCTCTGCAGTCAGGAACTTGACATGCATCCCAGAGGGGTTAACAGGTGTCTaGAAGGGAGGGGTAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPFSPKASAVRNLTCIPEGLTGV*KGGVAW Trigger: CCAGGCTACCCCTCCCTTCAAGACACCTGTTAACCC...CTCTGGGATGCATGTCAAGTTCCTGACTGCAGAGGCCTTGGGGGAGAAGGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | CTGCATCCAGGCCTGGGGTTCTCAGACACCAAGTCATaGGGCCGTGACAGGCACAGGAACTTTGCCCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LHPGLGFSDTKS*GRDRHRNFAPL Trigger: CAAAGGGGCAAAGTTCCTGTGCCTGTCACGGCCTCATGACTTGGTGTCTGAGAACCCCAGGCCTGGATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | ATGCTGTCACTCAGCCTCCCTGCCTGTCCACAGGTGTaGAGACAGTCCTTTCAGGACAGTCACCTCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: MLSLSLPACPQV*RQSFQDSHLSL Trigger: CAGGCTGAGGTGACTGTCCTGAAAGGACTGTCTGCACACCTGTGGACAGGCAGGGAGGCTGAGTGACAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | GTTGCCTCACAACTACCTCCCTCTAGTGGCACACGCTaGTCCTCACTCTGCTCACACTGGGCTCAGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: VASQLPPSSGTR*SSLCSHWAQDA Trigger: AGCATCCTGAGCCCAGTGTGAGCAGAGTGAGGAGCAGCGTGTGCCACTAGAGGGAGGTAGTTGTGAGGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | CTGGTTGCAGAGAGGGCTGGACCTACAGGGCTGTTCTaGAGACTGAGTAGGGCACACCAGCAGTTTGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LVAERAGPTGLF*RLSRAHQQFGR Trigger: TCTGCCAAACTGCTGGTGTGCCCTACTCAGTCTCCAGAACAGCCCTGTAGGTCCAGCCCTCTCTGCAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTCTTCACCCACCTATTCTGCTTGCCTCGGGGCCTCTCCTCCATCAGCTGGGTTTTCCATCTTCCTaGCCGCAGGCCTCATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLHPPILLASGPLLHQLGFPSS*PQASCS Trigger: GGAACATGAGGCCTGCGGCAAGGAAGATGGAAAACC...CAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAGGTGGGTGAAGAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | GTAGACCAGGCCTGGCCTCAATCTCTGACATTCACTTaGCTCTGCCTCCCGAGTGCTGGGATTAACCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: VDQAWPQSLTFT*LCLPSAGINHP Trigger: TGGGTGGTTAATCCCAGCACTCGGGAGGCAGAGGCAAGTGAATGTCAGAGATTGAGGCCAGGCCTGGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | AAGGCAGTCCCCATGGTGGCTCCCAACCTGCTCTTCTaGTATCTGACACTAAGCGCTCCAGCCACACCACTT | + |
|
Preference number: 3 (lower is better) Translates to: KAVPMVAPNLLF*YLTLSAPATPL Trigger: AAGTGGTGTGGCTGGAGCGCTTAGTGTCAGATAGCAGAAGAGCAGGTTGGGAGCCACCATGGGGACTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | AGACAGCAGGGTGGGTCTGTGCTTGGAGCTCAATCGTaGCTCAGACACAGAGCAGCCACAGAACCCCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RQQGGSVLGAQS*LRHRAATEPLN Trigger: ATTCAGGGGTTCTGTGGCTGCTCTGTGTCTGAGCCACGATTGAGCTCCAAGCACAGACCCACCCTGCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTTTCCAAACCACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTGAGCCTTCCATCAGGCTCTaGACTCAAAGGCAAAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: ACFQTTTGPCGTKAGAREPSIRL*TQRQKS Trigger: TGATTTTTGCCTTTGAGTCAAGAGCCTGATGGAAGG...CTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTGGTTTGGAAACAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | AGGGCATGTCTCTTCTCTTCACCCACCTATTCTGCTTaGCTCGGGGCCTCTCCTCCATCAGCTGGAAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RACLFSSPTYSA*LGASPPSAGSL Trigger: CAAACTTCCAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAGGTGGGTGAAGAGAAGAGACATGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | CTATTCTGCTTGCCTCGGGGCCTCTCCTCCATCAGCTaGAAGTTTGTCATCCACTGTGGGACAGCCATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFCLPRGLSSIS*KFVIHCGTAID Trigger: GTCAATGGCTGTCCCACAGTGGATGACAAACTTCCAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTAGGCTGAGCCCCTGCCTCACCTTATTCGTCTCTGCAAGCATGACCTATTCCATCTCTGACATTCACTaGCCTCTGCCTCCCGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRLSPCLTLFVSASMTYSISDIH*PLPPEC Trigger: GCACTCGGGAGGCAGAGGCAAGTGAATGTCAGAGAT...GGAATAGGTCATGCTTGCAGAGACGAATAAGGTGAGGCAGGGGCTCAGCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | ATTCCTCCTCCACCTTTCCCTAAGGTCAGCTGGATCTaGGGGATGCAGGCTCTGGGACCTGTCTTAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: IPPPPFPKVSWI*GMQALGPVLAT Trigger: AGTAGCTAAGACAGGTCCCAGAGCCTGCATCCCTCAGATCCAGCTGACCTTAGGGAAAGGTGGAGGAGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | CAGCTGGAAGTTTGTCATCCACTGTGGGACAGCCATTaGCCAATGAGAAAGCCCAGCTCCCCTGCTCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QLEVCHPLWDSH*PMRKPSSPALV Trigger: GACTAGAGCAGGGGAGCTGGGCTTTCTCATTGGTCAATGGCTGTCCCACAGTGGATGACAAACTTCCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | TTCCCGCAGGCCCACCTTCAGAGTGTGTCCAGGAGGTaGCAGTTGTCACATTCCCACAGCCAACAAGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: FPQAHLQSVSRR*QLSHSHSQQVQ Trigger: TTGTACTTGTTGGCTGTGGGAATGTGACAACTGTCACCTCCTGGACACACTCTGAAGGTGGGCCTGCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | TGTGGTAAGAACGCAGGAGATAGAGGGAGTCACCCATaGCCTGCCTCATGGGTCAGTATCAGAGGCAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CGKNAGDRGSHP*PASWVSIRGSD Trigger: ATCACTGCCTCTGATACTGACCCATGAGGCAGGGCATGGGTGACTCCCTCTATCTCCTGCGTTCTTACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | CAGGGGTTAACAGGTGTCTTGAAGGGAGGGGTAGCCTaGAGAATTAGGACTGGGCTCTTCTCCACTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGLTGVLKGGVA*RIRTGLFSTEK Trigger: CTTCTCAGTGGAGAAGAGCCCAGTCCTAATTCTCCAGGCTACCCCTCCCTTCAAGACACCTGTTAACCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | CATATTTTAGTGACAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAAGGAACTTTGCCCCTTaGCAGAGCAGGCTGAGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: HILVTRPFPNRPSHWSFERNFAP*QSRLSG Trigger: CCCGCTCAGCCTGCTCTGCAAAGGGGCAAAGTTCCT...TTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTGTCACTAAAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | ACGCTAAGTAGTAGACTGACTCCTTTCACCTGCTGCTaGGCCTCGTCTCTGGGCCCCGGCTCATGTTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: TLSSRLTPFTCC*ASSLGPGSCFI Trigger: TATAAAACATGAGCCGGGGCCCAGAGACGAGGCTCAGCAGCAGGTGAAAGGAGTCAGTCTACTACTTAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | CTCTGCAAGCATGACCTATTCCAAGAGACACGGCACTaGTACTCCAGGCCTTCCTTCTGCCTAGAAACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LCKHDLFQETRH*YSRPSFCLETA Trigger: GGCAGTTTCTAGGCAGAAGGAAGGCCTGGAGTATCAGTGCCGTGTCTCTTGGAATAGGTCATGCTTGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | AGGCAAAAATCATACCAAGACAGCAGGGTGGGTCTGTaGTTGGAGCTCAATCGTGGCTCAGACACAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RQKSYQDSRVGL*LELNRGSDTEQ Trigger: CTGCTCTGTGTCTGAGCCACGATTGAGCTCCAAGCACAGACCCACCCTGCTGTCTTGGTATGATTTTTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | AAAAATCATACCAAGACAGCAGGGTGGGTCTGTGCTTaGAGCTCAATCGTGGCTCAGACACAGAGCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KNHTKTAGWVCA*SSIVAQTQSSH Trigger: GTGGCTGCTCTGTGTCTGAGCCACGATTGAGCTCCAAGCACAGACCCACCCTGCTGTCTTGGTATGATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | GCAGGAGATAGAGGGAGTCACCCATGCCCTGCCTCATaGGTCAGTATCAGAGGCAGTGATAGTCACTTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AGDRGSHPCPAS*VSIRGSDSHLD Trigger: ATCTAAGTGACTATCACTGCCTCTGATACTGACCCATGAGGCAGGGCATGGGTGACTCCCTCTATCTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | CTGCCTAGAAACTGCCCAGAAACAGGAGAAACACCCTaGGTTTTCCATCTTCCTTGCCGCAGGCCTCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPRNCPETGETP*VFHLPCRRPHV Trigger: AACATGAGGCCTGCGGCAAGGAAGATGGAAAACCCAGGGTGTTTCTCCTGTTTCTGGGCAGTTTCTAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | ATGAGAAAGCCCAGCTCCCCTGCTCTAGTCTGCTTTTaGGGCTCTTCCAGAGATATTCCTCCTCCACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: MRKPSSPALVCF*GSSRDIPPPPF Trigger: GAAAGGTGGAGGAGGAATATCTCTGGAAGAGCCCCAAAAGCAGACTAGAGCAGGGGAGCTGGGCTTTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | CAACAAGCAAGCAATAGACTTGCAAACAGGACAAGAGACTTCAGCTCTGCAGGCACAGGCACAGGAACTTaGCCCCTTTGCAGAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QQASNRLANRTRDFSSAGTGTGT*PLCRAG Trigger: GCCTGCTCTGCAAAGGGGCAAAGTTCCTGTGCCTGT...GCCTGCAGAGCTGAAGTCTCTTGTCCTGTTTGCAAGTCTATTGCTTGCTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAATTTAAAACAAGGGCCTGTGTGCTCCTCTaGGCTTTCCAGTCAGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QGPSPTGHLTGPLKFKTRACVLL*AFQSVA Trigger: TGCCACTGACTGGAAAGCCAAGAGGAGCACACAGGC...CCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | CTGCTCCTCACTCTGCTCACACTGGGCTCAGGATGCTaGTTGTATGGGATGCTGATTGTATGGGATGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLTLLTLGSGC*LYGMLIVWDGV Trigger: AACACCATCCCATACAATCAGCATCCCATACAATCAGCATCCTGAGCCCAGTGTGAGCAGAGTGAGGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | GCACTGATACTCCAGGCCTTCCTTCTGCCTAGAAACTaGCCAGAAACAGGAGAAACACCCTGGGTTTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALILQAFLLPRN*PETGETPWVFH Trigger: ATGGAAAACCCAGGGTGTTTCTCCTGTTTCTGGGCAGTTTCTAGGCAGAAGGAAGGCCTGGAGTATCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | TGCAGACAGTCCTTTCAGGACAGTCACCTCAGCCTGTaGTTCCCCATAAGTCTTCAAGTATCTGTCCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CRQSFQDSHLSL*FPISLQVSVPR Trigger: TCTGGGGACAGATACTTGAAGACTTATGGGGAACCACAGGCTGAGGTGACTGTCCTGAAAGGACTGTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | CACTCTGCTCACACTGGGCTCAGGATGCTGATTGTATaGGATGCTGATTGTATGGGATGGTGTTCCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSAHTGLRMLIV*DADCMGWCSTV Trigger: CACTGTGGAACACCATCCCATACAATCAGCATCCCATACAATCAGCATCCTGAGCCCAGTGTGAGCAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | GGTCATCAGACCTGGCAGTATGTACCCTCTACCCACTaGGCTATCTCAATGGCCCATCTTATCCCCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GHQTWQYVPSTH*AISMAHLIPTF Trigger: AAAAGTGGGGATAAGATGGGCCATTGAGATAGCTCAGTGGGTAGAGGGTACATACTGCCAGGTCTGATGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTCAGTGGCAACTACAGGGTACAGCCCCAATCCTACTGTTAGTATTCCTGCCGATGCATGCTCTCTaGAGTTCTTACTCAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSQWQLQGTAPILLLVFLPMHAL*SSYSVE Trigger: TTCCACTGAGTAAGAACTCAAGAGAGCATGCATCGG...CAGGAATACTAACAGTAGGATTGGGGCTGTACCCTGTAGTTGCCACTGACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR TCA 72 bp | AAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTaGAATTTAAAACAAGGTTCTCTGGTTGCAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KALPQQAISLVL*NLKQGSLVAER Trigger: CCTCTCTGCAACCAGAGAACCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | ACTGGTCCTTTGAAATTTAAAACAAGGTTCTCTGGTTaGAGAGAGGGCTGGACCTACAGGGCTGTTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TGPLKFKTRFSG*REGWTYRAVLE Trigger: CTCCAGAACAGCCCTGTAGGTCCAGCCCTCTCTGCAACCAGAGAACCTTGTTTTAAATTTCAAAGGACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CCA 72 bp | GGCAGTATGTACCCTCTACCCACTGAGCTATCTCAATaGCCCATCTTATCCCCACTTTTCAGAACAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSMYPLPTELSQ*PILSPLFRTGN Trigger: GTTTCCTGTTCTGAAAAGTGGGGATAAGATGGGCCATTGAGATAGCTCAGTGGGTAGAGGGTACATACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR GCA 72 bp | ATCAACCAGTCACATTCAGATTCGGATACCGATGCATaGTCTCTTGAGTTCTTACTCAGTGGAAGGCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: INQSHSDSDTDA*SLEFLLSGRQS Trigger: GGACTGCCTTCCACTGAGTAAGAACTCAAGAGAGCATGCATCGGTATCCGAATCTGAATGTGACTGGTTGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACCCTATGGGACCCAGAGATCAAACTCATATTTTAGTGACAAGGCCCTTCCTCTCTTCTCTCTGTTaGTGTGTAAAACCTCATACC | + |
|
Preference number: 3 (lower is better) Translates to: FHPMGPRDQTHILVTRPFLSSLC*CVKPHT Trigger: GGTATGAGGTTTTACACACAAACAGAGAGAAGAGAG...GAAGGGCCTTGTCACTAAAATATGAGTTTGATCTCTGGGTCCCATAGGGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGTTTCCAAACCACCACGGGGCCTTGTGGCACAAAGGCAGGTGCCCGTGAGCCCCGGGGGACAGCTTaGCCCTTGTTCTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACFQTTTGPCGTKAGAREPRGTA*PLFSRL Trigger: AAGCCTGGAGAACAAGGGCCAAGCTGTCCCCCGGGG...CTCACGGGCACCTGCCTTTGTGCCACAAGGCCCCGTGGTGGTTTGGAAACAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | TGTGGCACAAAGGCAGGTGCCCGTGAGAGCAGCTGGTaGAAGAGCCCCGTCCCACAAGCACAGCCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGTKAGARESSW*KSPVPQAQPSG Trigger: TCCAGAAGGCTGTGCTTGTGGGACGGGGCTCTTCAACCAGCTGCTCTCACGGGCACCTGCCTTTGTGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | TGGCCATCCTGTGCCCCACCAGCCTGTGTGCTCCTCTaGGCTTTCCAGTCAGTGGCAACTACAGGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPSCAPPACVLL*AFQSVATTGYS Trigger: GCTGTACCCTGTAGTTGCCACTGACTGGAAAGCCAAGAGGAGCACACAGGCTGGTGGGGCACAGGATGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCTTCACCCACCTATTCTGCTTGCCTCGGGGCCTCTCCTCCATCAGCTGCCAAGCATAGGAGCTTaGGAACACCAAGCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLHPPILLASGPLLHQLPSIGA*EHQAAP Trigger: TGGGGCTGCTTGGTGTTCTCAAGCTCCTATGCTTGG...CAGCTGATGGAGGAGAGGCCCCGAGGCAAGCAGAATAGGTGGGTGAAGAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | CCAACCACAGCTCTAGCCCAGGGGTTAACAGGTGTCTaGAAGGGAGGGGTAGCCTGGAGAATTAGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTTALAQGLTGV*KGGVAWRIRTG Trigger: CCCAGTCCTAATTCTCCAGGCTACCCCTCCCTTCAAGACACCTGTTAACCCCTGGGCTAGAGCTGTGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCCCAGGGGTTAACAGGTGTCTTGAAGGGAGGGGTAGCCTGGAGAATTAGGGGCCAGTGTCCCCAGTaGCAACACTCGAGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAQGLTGVLKGGVAWRIRGQCPQ*QHSSRR Trigger: TCTTCTACTCGAGTGTTGCCACTGGGGACACTGGCC...CCTAATTCTCCAGGCTACCCCTCCCTTCAAGACACCTGTTAACCCCTGGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTTGAAATTTAAAACAAGGTCTATAGAGTCCCGCTaGGCCACAGCCCACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: QGPSPTGHLTGPLKFKTRSIESR*ATAHTP Trigger: GGGTGTGTGGGCTGTGGCCCAGCGGGACTCTATAGA...CCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCCCAGGGGTTAACAGGTGTCTTGAAGGGAGGGGTAGCCTGGAGAATTAGGTGTCCAGGAAGATGGTaGCAACCAAGCCACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAQGLTGVLKGGVAWRIRCPGRW*QPSHQE Trigger: TTCTTGGTGGCTTGGTTGCCACCATCTTCCTGGACA...CCTAATTCTCCAGGCTACCCCTCCCTTCAAGACACCTGTTAACCCCTGGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | CAAAAATCATACCAAGACAGCAGGGTGGGTCTGTGCTaGGAGCTCAATCGTGGCTCAGACACAGAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKSYQDSRVGLC*ELNRGSDTEQP Trigger: TGGCTGCTCTGTGTCTGAGCCACGATTGAGCTCCAAGCACAGACCCACCCTGCTGTCTTGGTATGATTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | TCAGCTGGAAGTTTGTCATCCACTGTGGGACAGCCATaGACCAATGAGAAAGCCCAGCTCCCCTGCTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAGSLSSTVGQP*TNEKAQLPCSS Trigger: ACTAGAGCAGGGGAGCTGGGCTTTCTCATTGGTCAATGGCTGTCCCACAGTGGATGACAAACTTCCAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | TGTGCCACAGTACTAACATGGAGGTCAGAGGACAACTaGCAGGAGTCAGTTCCACCCTATGGGACCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CATVLTWRSEDN*QESVPPYGTQR Trigger: TCTCTGGGTCCCATAGGGTGGAACTGACTCCTGCAAGTTGTCCTCTGACCTCCATGTTAGTACTGTGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTGTTTGTGTGTAAAACCTCATACCATGACAAGAGTATGTGTGGAGGTCGCTTCAGCAGCAAGCTaGGGATGGCCATGCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCLCVKPHTMTRVCVEVASAAS*GWPCRR Trigger: GCGCCGGCATGGCCATCCTCAGCTTGCTGCTGAAGC...GACCTCCACACATACTCTTGTCATGGTATGAGGTTTTACACACAAACAGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCGAGTGCTGGGATTAACCACCCACCAGGCAGGTTTTTAATATTCTGGATTCTTGTTCTCCAGGCTTaGAAAGGGGTCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSAGINHPPGRFLIFWILVLQA*KGVCSS Trigger: GCTGCTGCAGACCCCTTTGCAAGCCTGGAGAACAAG...AATCCAGAATATTAAAAACCTGCCTGGTGGGTGGTTAATCCCAGCACTCGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | ACAGGCCCACAGGTAGCCCTTCCTTCCATCAGGCTCTaGACTCAAAGGCAAAAATCATACCAAGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGPQVALPSIRL*TQRQKSYQDSR Trigger: CCTGCTGTCTTGGTATGATTTTTGCCTTTGAGTCAAGAGCCTGATGGAAGGAAGGGCTACCTGTGGGCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | AATGAGAAAGCCCAGCTCCCCTGCTCTAGTCTGCTTTaGGGGCTCTTCCAGAGATATTCCTCCTCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NEKAQLPCSSLL*GLFQRYSSSTF Trigger: AAAGGTGGAGGAGGAATATCTCTGGAAGAGCCCCAAAAGCAGACTAGAGCAGGGGAGCTGGGCTTTCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | CAAGGCCCTTCCCCAACAGGCCATCTCACTGGTCCTTaGAAATTTAAAACAAGGTTCTCTGGTTGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGPSPTGHLTGP*KFKTRFSGCRE Trigger: CTCTCTGCAACCAGAGAACCTTGTTTTAAATTTCAAAGGACCAGTGAGATGGCCTGTTGGGGAAGGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR TCA 90 bp | CATGACAAGAGTATGTGTGGAGGTCAGAGGACAACTTTCTCAAGTCGGTCCAAAGTTGTCAACAGCCAGTaGACCAGGAGAATAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HDKSMCGGQRTTFSSRSKVVNSQ*TRRITF Trigger: GAAGGTTATTCTCCTGGTTCACTGGCTGTTGACAAC...TTTGGACCGACTTGAGAAAGTTGTCCTCTGACCTCCACACATACTCTTGTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| 3UTR CAA 72 bp | CTCAGGAAGATTCAACTCAACAAGCAAGCAATAGACTaGCAAACAGGACAAGAGACTTCAGCTCTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRKIQLNKQAID*QTGQETSALQA Trigger: TGCCTGCAGAGCTGAAGTCTCTTGTCCTGTTTGCAAGTCTATTGCTTGCTTGTTGAGTTGAATCTTCCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS TCA 90 bp | GCATGTGGTAGACGAGGCAGCAAGAGAAGGGCTTCAGCAGCAAGCTaGGGATGGCCATGCCGGCGCCGAAGCGGCCAGTGTCCCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ACGRRGSKRRASAAS*GWPCRRRSGQCPQW Trigger: CCACTGGGGACACTGGCCGCTTCGGCGCCGGCATGGCCATCCTCAGCTTGCTGCTGAAGCCCTTCTCTTGCTGCCTCGTCTACCACATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS CCA 90 bp | ACCAAGCCACCAAGAAACATGCCTATGGCATCTATAGAGTCCCGCTaGGCCACAGCCCACACACCCAGGGCCAGGATAGTGAAGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TKPPRNMPMASIESR*ATAHTPRARIVKLP Trigger: GGGCAACTTCACTATCCTGGCCCTGGGTGTGTGGGCTGTGGCCCAGCGGGACTCTATAGATGCCATAGGCATGTTTCTTGGTGGCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR CAA 90 bp | CAACAAGCAAGCAATAGACTTGCAAACAGGACAAGAGACTTCAGCTCTGCAGGCCCCCCGGGGGACAGCTaGGCCCTTGTTCTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QQASNRLANRTRDFSSAGPPGDS*ALVLQA Trigger: AGCCTGGAGAACAAGGGCCAAGCTGTCCCCCGGGGG...GCCTGCAGAGCTGAAGTCTCTTGTCCTGTTTGCAAGTCTATTGCTTGCTTGTTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS-3UTR CAA 90 bp | TGCCACAGTACTAACATGGAGGTCAGAGGACAACTTGCAGGAGTCAGTTCCACCCTGATGATGAGTCAATaGTCTGGTAGGCACTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CHSTNMEVRGQLAGVSSTLMMSQ*SGRHCA Trigger: AGCACAGTGCCTACCAGACAATTGACTCATCATCAG...GGTGGAACTGACTCCTGCAAGTTGTCCTCTGACCTCCATGTTAGTACTGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS TCA 72 bp | AGACGAGGCAGCAAGAGAAGGGCTTCAGCAGCAAGCTaGGGATGGCCATGCCGGCGCCGAAGCGGCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRGSKRRASAAS*GWPCRRRSGQC Trigger: ACACTGGCCGCTTCGGCGCCGGCATGGCCATCCTCAGCTTGCTGCTGAAGCCCTTCTCTTGCTGCCTCGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS CAA 90 bp | CCAGGCTTGCAAAGGGGTCTGCAGCAGCGTCTGATGATGAGTCAATaGTCTGGTAGGCACTGTGCTCCTGAGAGGGTCCGAAGAAATCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLQRGLQQRLMMSQ*SGRHCAPERVRRNR Trigger: CCGATTTCTTCGGACCCTCTCAGGAGCACAGTGCCTACCAGACAATTGACTCATCATCAGACGCTGCTGCAGACCCCTTTGCAAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS CAA 72 bp | CAAAGGGGTCTGCAGCAGCGTCTGATGATGAGTCAATaGTCTGGTAGGCACTGTGCTCCTGAGAGGGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: QRGLQQRLMMSQ*SGRHCAPERVR Trigger: TCGGACCCTCTCAGGAGCACAGTGCCTACCAGACAATTGACTCATCATCAGACGCTGCTGCAGACCCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||
| CDS TCA 72 bp | GAGAACACCAAGCAGCCCCAGGTTGTCAACAGCCAGTaGACCAGGAGAATAACCTTCAAGTTCACGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ENTKQPQVVNSQ*TRRITFKFTAG Trigger: GCCTGCCGTGAACTTGAAGGTTATTCTCCTGGTTCACTGGCTGTTGACAACCTGGGGCTGCTTGGTGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030865.9 |
||