Pregenerated sensors for AGTR1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054988Ensembl transcript IDs: ENSMUST00000068316.8, ENSMUST00000163776.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCTTCCTTGTCCCTTGGAAACTCTTGACTTCTCATCTTCTTTTTaGTTGTCAACAGAGTTAATACCGACTAATTATGTTCATGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LLPCPLETLDFSSSF*LSTELIPTNYVHVE Trigger: TTCCACATGAACATAATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGTTTCCAAGGGACAAGGAAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| 3UTR TCA 90 bp | GCAAAGACTACATTTCTTAGATATGAAATAAAACTGGTCCAACTATaGAGACACAGTTACCTGGGAGAGAATCACAGCAGTTTGACTTTA | + |
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Preference number: 1 (lower is better) Translates to: AKTTFLRYEIKLVQL*RHSYLGENHSSLTL Trigger: TAAAGTCAAACTGCTGTGATTCTCTCCCAGGTAACTGTGTCTTCATAGTTGGACCAGTTTTATTTCATATCTAAGAAATGTAGTCTTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTTGTCTAGCTAAATGCTaGTCTGGCTTCTACTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PVHFPLPQINSHSVCDTVCLAKC*SGFYCQ Trigger: CTGACAGTAGAAGCCAGAGCAGCATTTAGCTAGACA...AACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| 3UTR-3UTR GCA 90 bp | GTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCTTTGTCTAGCTAAATGCTaGTCTGGCTTCTACTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VHFPLPQINSHSVCDTVLCLAKC*SGFYCQ Trigger: CTGACAGTAGAAGCCAGAGCAGCATTTAGCTAGACA...AAGAACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATAAGACATGGTATTTCTaGCAGTACATTTCCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: TLDFSSSFCLSTELIPTNKTWYF*QYISPS Trigger: GGAGGGGGAAATGTACTGGCAGAAATACCATGTCTT...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| 3UTR CAA 90 bp | CTTCCTTGTCCCTTGGAAACTCTTGACTTCTCATCTTCTTTTTGCTaGTCAACAGAGTTAATACCGACTAATTATGTTCATGTGGAAATC | + |
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Preference number: 2 (lower is better) Translates to: LPCPLETLDFSSSFC*STELIPTNYVHVEI Trigger: GATTTCCACATGAACATAATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGTTTCCAAGGGACAAGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGTACACTGTTTCGAATTCTTAAGACACTGGCTGAACTTCACAAAAAGTTTTTCCCTTGGAAACTCTTaGCTTCTCATCTTCTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VVHCFEFLRHWLNFTKSFSLGNS*LLIFFL Trigger: CAAAAAGAAGATGAGAAGTCAAGAGTTTCCAAGGGA...AAAACTTTTTGTGAAGTTCAGCCAGTGTCTTAAGAATTCGAAACAGTGTACCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTACACTGTTTCGAATTCTTAAGACACTGGCTGAACTTCACAAAAAGTTTTAGGGCATTGAAGACATaGTATTTCTGCCAGTACATT | + |
|
Preference number: 2 (lower is better) Translates to: VVHCFEFLRHWLNFTKSFRALKT*YFCQYI Trigger: AATGTACTGGCAGAAATACCATGTCTTCAATGCCCT...AAAACTTTTTGTGAAGTTCAGCCAGTGTCTTAAGAATTCGAAACAGTGTACCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| 3UTR CCA 72 bp | CTAGTAGATAAACTGATGTGTTGCTTCCTTGTCCCTTaGAAACTCTTGACTTCTCATCTTCTTTTTGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LVDKLMCCFLVP*KLLTSHLLFAC Trigger: ACAAGCAAAAAGAAGATGAGAAGTCAAGAGTTTCCAAGGGACAAGGAAGCAACACATCAGTTTATCTACTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| CDS-3UTR TCA 90 bp | CCAGTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTGCGATCTTACATAGGTaGTTGCCGAAGGGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: PVHFPLPQINSHSVCDTVAILHR*LPKGHW Trigger: CCAGTGGCCCTTCGGCAATCACCTATGTAAGATCGC...AACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | CCAGTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTTGTGCCTGCCAGCCTTaGGGCAGTCATCTTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PVHFPLPQINSHSVCDTVCACQP*GSHLGF Trigger: GAATCCAAGATGACTGCCCCAAGGCTGGCAGGCACA...AACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR GCA 90 bp | GTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCTTGTTGATAACCCTGCATaGGACCTGGCCTTTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHFPLPQINSHSVCDTVLVDNPA*DLAFGG Trigger: TCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAAC...AAGAACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | GTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCTTTGTGCCTGCCAGCCTTaGGGCAGTCATCTTGGATTC | + |
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Preference number: 4 (lower is better) Translates to: VHFPLPQINSHSVCDTVLCACQP*GSHLGF Trigger: GAATCCAAGATGACTGCCCCAAGGCTGGCAGGCACA...AAGAACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | GTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCTTTGGATGACGCCCAGCTaGATGAGCACATCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VHFPLPQINSHSVCDTVLWMTPS*MSTSRK Trigger: TTTTCTGGATGTGCTCATTCAGCTGGGCGTCATCCA...AAGAACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR GCA 90 bp | CCAGTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTATATGTAATTGTGCCTaGCAGCCTTGGGGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PVHFPLPQINSHSVCDTVICNCA*QPWGSH Trigger: ATGACTGCCCCAAGGCTGGCAGGCACAATTACATAT...AACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTGGATGACGCCCAGCTaGATGAGCACATCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: KRIERALKTWYFCQYISPWMTPS*MSTSRK Trigger: TTTTCTGGATGTGCTCATTCAGCTGGGCGTCATCCA...GGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCCGAGCTCATGTTATCTaGAGGGCGGTAGGAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRIERALKTWYFCQYISPRAHVI*RAVGKS Trigger: ACTCTTTCCTACCGCCCTTCAGATAACATGAGCTCG...GGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR GCA 90 bp | AGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTCCCATAGCGGTATAAACTaGCCACAGAGGCAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIERALKTWYFCQYISPSHSGIN*PQRQSQ Trigger: TTGACTTTGCCTCTGTGGGCAGTTTATACCGCTATG...GGAGGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | CCAGTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTATGCGACCTGGCCTTTaGGGGAATATATTTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PVHFPLPQINSHSVCDTVMRPGL*GNIFQK Trigger: CTTCTGAAATATATTCCCCCAAAGGCCAGGTCGCAT...AACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCGCACATCCAGAAAACTaGATATTTGGTGGGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: KRIERALKTWYFCQYISPAHPEN*IFGGEP Trigger: GGGTTCCCCACCAAATATTCAGTTTTCTGGATGTGC...GGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATGCGATCTTACATAGGTaGTTGCCGAAGGGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLDFSSSFCLSTELIPTNAILHR*LPKGHW Trigger: CCAGTGGCCCTTCGGCAATCACCTATGTAAGATCGC...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR GCA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATGTTGATAACCCTGCATaGGACCTGGCCTTTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: TLDFSSSFCLSTELIPTNVDNPA*DLAFGG Trigger: TCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAAC...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | AGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTCCAAACTGAATATTTGGTaGGGAACCCAGGAAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RIERALKTWYFCQYISPSKLNIW*GTQEKK Trigger: CTTCTTTTCCTGGGTTCCCCACCAAATATTCAGTTT...GGAGGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | GTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCTTTATTGGTGTTCTCGATaGAATACACATTTCGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VHFPLPQINSHSVCDTVLYWCSR*NTHFGG Trigger: TCCACCGAAATGTGTATTTCATCGAGAACACCAATA...AAGAACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCGAGCTCATGTTATCTaGAGGGCGGTAGGAAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: NKRIERALKTWYFCQYISRAHVI*RAVGKS Trigger: ACTCTTTCCTACCGCCCTTCAGATAACATGAGCTCG...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | CCAGTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTTTGGGGCAGTCATCTTaGATTCTTTTAATTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: PVHFPLPQINSHSVCDTVLGQSS*ILLIPS Trigger: AGATGGAATTAAAAGAATCCAAGATGACTGCCCCAA...AACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | AGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTCCTTGGGGCAGTCATCTTaGATTCTTTTAATTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: RIERALKTWYFCQYISPSLGQSS*ILLIPS Trigger: AGATGGAATTAAAAGAATCCAAGATGACTGCCCCAA...GGAGGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | GTGGTACACTGTTTCGAATTCTTAAGACACTGGCTGAACTTCACAAAAAGTTTTAGCCCAGAATGTTCTTaGTCAGACCCAGTCCAATGG | + |
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Preference number: 4 (lower is better) Translates to: VVHCFEFLRHWLNFTKSFSPECS*SDPVQW Trigger: CCATTGGACTGGGTCTGACCAAGAACATTCTGGGCT...AAAACTTTTTGTGAAGTTCAGCCAGTGTCTTAAGAATTCGAAACAGTGTACCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| CDS-3UTR CCA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCAGCCCAGAATGTTCTTaGTCAGACCCAGTCCAATGG | + |
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Preference number: 4 (lower is better) Translates to: NKRIERALKTWYFCQYISSPECS*SDPVQW Trigger: CCATTGGACTGGGTCTGACCAAGAACATTCTGGGCT...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTATTGGTGTTCTCGATaGAATACACATTTCGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KRIERALKTWYFCQYISPYWCSR*NTHFGG Trigger: TCCACCGAAATGTGTATTTCATCGAGAACACCAATA...GGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR TCA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCGCACATCCAGAAAACTaGATATTTGGTGGGGAACCC | + |
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Preference number: 4 (lower is better) Translates to: NKRIERALKTWYFCQYISAHPEN*IFGGEP Trigger: GGGTTCCCCACCAAATATTCAGTTTTCTGGATGTGC...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR GCA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCATATGTAATTGTGCCTaGCAGCCTTGGGGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NKRIERALKTWYFCQYISICNCA*QPWGSH Trigger: ATGACTGCCCCAAGGCTGGCAGGCACAATTACATAT...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR GCA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCATAGCGGTATAAACTaGCCACAGAGGCAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: NKRIERALKTWYFCQYISHSGIN*PQRQSQ Trigger: TTGACTTTGCCTCTGTGGGCAGTTTATACCGCTATG...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR GCA 90 bp | GTGGTACACTGTTTCGAATTCTTAAGACACTGGCTGAACTTCACAAAAAGTTTTTCTTACATAGGTGATTaGCGAAGGGCCACTGGTATT | + |
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Preference number: 4 (lower is better) Translates to: VVHCFEFLRHWLNFTKSFSYIGD*RRATGI Trigger: AATACCAGTGGCCCTTCGGCAATCACCTATGTAAGA...AAAACTTTTTGTGAAGTTCAGCCAGTGTCTTAAGAATTCGAAACAGTGTACCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| CDS-3UTR CCA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCATGCGACCTGGCCTTTaGGGGAATATATTTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NKRIERALKTWYFCQYISMRPGL*GNIFQK Trigger: CTTCTGAAATATATTCCCCCAAAGGCCAGGTCGCAT...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| 3UTR CAA 72 bp | AAACTGATGTGTTGCTTCCTTGTCCCTTGGAAACTCTaGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KLMCCFLVPWKL*TSHLLFACQQS Trigger: ACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGTTTCCAAGGGACAAGGAAGCAACACATCAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| CDS-3UTR CCA 90 bp | GTGGTACACTGTTTCGAATTCTTAAGACACTGGCTGAACTTCACAAAAAGTTTTTCAGAAGGAAAACACTaGCCACAGTCTTTAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VVHCFEFLRHWLNFTKSFSEGKH*PQSLAS Trigger: TGAAGCTAAAGACTGTGGCCAGTGTTTTCCTTCTGA...AAAACTTTTTGTGAAGTTCAGCCAGTGTCTTAAGAATTCGAAACAGTGTACCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| CDS-3UTR TCA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATTCCAATGGGGAGTGTTaGGTTCTGAGATTCATAATG | + |
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Preference number: 4 (lower is better) Translates to: TLDFSSSFCLSTELIPTNSNGEC*VLRFIM Trigger: CATTATGAATCTCAGAACTCAACACTCCCCATTGGA...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CCA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATGATGTCATCATTCCTTaGCGTATTCTTCTGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: TLDFSSSFCLSTELIPTNDVIIP*RILLNF Trigger: AAAATTCAGAAGAATACGCCAAGGAATGATGACATC...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS TCA 90 bp | GTGTCCACTACGTCCGCAATTTCACAGTCATGGATGACGCCCAGCTaGATGAGCACATCCAGAAAACTGAATATTTGGTGGGGAACCCAG | + |
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Preference number: 5 (lower is better) Translates to: VSTTSAISQSWMTPS*MSTSRKLNIWWGTQ Trigger: CTGGGTTCCCCACCAAATATTCAGTTTTCTGGATGTGCTCATTCAGCTGGGCGTCATCCATGACTGTGAAATTGCGGACGTAGTGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CCA 90 bp | GCACAAACTGTGATATTGGTGTTCTCGATGAAATACACATTTCGGTaGATGACGGCCGGCAAACTAGCCAAGCCAGCCATCAGCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: AQTVILVFSMKYTFR*MTAGKLAKPAISQM Trigger: CATCTGGCTGATGGCTGGCTTGGCTAGTTTGCCGGCCGTCATCCACCGAAATGTGTATTTCATCGAGAACACCAATATCACAGTTTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | GTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCTTTTGTGCCTGCCAGCCTaGGGGCAGTCATCTTGGATT | + |
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Preference number: 5 (lower is better) Translates to: VHFPLPQINSHSVCDTVLLCLPA*GQSSWI Trigger: AATCCAAGATGACTGCCCCAAGGCTGGCAGGCACAA...AAGAACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTCCATGATGCAGGTGACTTaGGCGACCAGCATTGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: RIERALKTWYFCQYISPSMMQVT*ATSIVR Trigger: ACGCACAATGCTGGTCGCCAAAGTCACCTGCATCAT...GGAGGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | GTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCTTATGATGCAGGTGACTTaGGCGACCAGCATTGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: VHFPLPQINSHSVCDTVLMMQVT*ATSIVR Trigger: ACGCACAATGCTGGTCGCCAAAGTCACCTGCATCAT...AAGAACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | CCAGTACATTTCCCCCTCCCCCAAATCAATAGTCACTCAGTTTGTGACACTGTTCATGCGACCTGGCCTTaGGGGGAATATATTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: PVHFPLPQINSHSVCDTVHATWP*GEYISE Trigger: TTCTGAAATATATTCCCCCAAAGGCCAGGTCGCATG...AACAGTGTCACAAACTGAGTGACTATTGATTTGGGGGAGGGGGAAATGTACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CCA 90 bp | AAGGGAACACGAAGCCCAGAATGTTCTTGGTCAGACCCAGTCCAATaGGGAGTGTTGAGTTCTGAGATTCATAATGAAAAGCACAAACTG | + |
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Preference number: 5 (lower is better) Translates to: KGTRSPECSWSDPVQ*GVLSSEIHNEKHKL Trigger: CAGTTTGTGCTTTTCATTATGAATCTCAGAACTCAACACTCCCCATTGGACTGGGTCTGACCAAGAACATTCTGGGCTTCGTGTTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCGGAGGCGAGACTTCATaGGGTGGACAATGGCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: NKRIERALKTWYFCQYISGGETS*GGQWLG Trigger: ACCTAGCCATTGTCCACCCAATGAAGTCTCGCCTCC...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATTTGTGCCTGCCAGCCTaGGGGCAGTCATCTTGGATT | + |
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Preference number: 5 (lower is better) Translates to: TLDFSSSFCLSTELIPTNLCLPA*GQSSWI Trigger: AATCCAAGATGACTGCCCCAAGGCTGGCAGGCACAA...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTCCGCACAAACTGTGATATaGGTGTTCTCGATGAAATAC | + |
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Preference number: 5 (lower is better) Translates to: RIERALKTWYFCQYISPSAQTVI*VFSMKY Trigger: GTATTTCATCGAGAACACCAATATCACAGTTTGTGC...GGAGGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CCA 90 bp | GGTAGGAAAGAGTACTCATTTTTGTTGATAACCCTGCATGCGACCTaGCCTTTGGGGGAATATATTTCAGAAGCTGGAGGAAATATCTTT | + |
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Preference number: 5 (lower is better) Translates to: GRKEYSFLLITLHAT*PLGEYISEAGGNIF Trigger: AAAGATATTTCCTCCAGCTTCTGAAATATATTCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAACAAAAATGAGTACTCTTTCCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCAAGCCCAGAATGTTCTaGGTCAGACCCAGTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: NKRIERALKTWYFCQYISKPRMF*VRPSPM Trigger: CATTGGACTGGGTCTGACCAAGAACATTCTGGGCTT...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCCCCTCCAGATGTCATCATTCCTaGGCGTATTCTTCTGAATTT | + |
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Preference number: 5 (lower is better) Translates to: RIERALKTWYFCQYISPSRCHHS*AYSSEF Trigger: AAATTCAGAAGAATACGCCAAGGAATGATGACATCT...GGAGGGGGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATAAGCCCAGAATGTTCTaGGTCAGACCCAGTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: TLDFSSSFCLSTELIPTNKPRMF*VRPSPM Trigger: CATTGGACTGGGTCTGACCAAGAACATTCTGGGCTT...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATCATGCGACCTGGCCTTaGGGGGAATATATTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TLDFSSSFCLSTELIPTNHATWP*GEYISE Trigger: TTCTGAAATATATTCCCCCAAAGGCCAGGTCGCATG...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | GTGGTACACTGTTTCGAATTCTTAAGACACTGGCTGAACTTCACAAAAAGTTTTCTTGGGGCAGTCATCTaGGATTCTTTTAATTCCATC | + |
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Preference number: 5 (lower is better) Translates to: VVHCFEFLRHWLNFTKSFLGAVI*DSFNSI Trigger: GATGGAATTAAAAGAATCCAAGATGACTGCCCCAAG...AAAACTTTTTGTGAAGTTCAGCCAGTGTCTTAAGAATTCGAAACAGTGTACCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000068316.8 |
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| CDS-3UTR CAA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATCTTGGGGCAGTCATCTaGGATTCTTTTAATTCCATC | + |
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Preference number: 5 (lower is better) Translates to: TLDFSSSFCLSTELIPTNLGAVI*DSFNSI Trigger: GATGGAATTAAAAGAATCCAAGATGACTGCCCCAAG...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCGCACAAACTGTGATATaGGTGTTCTCGATGAAATAC | + |
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Preference number: 5 (lower is better) Translates to: NKRIERALKTWYFCQYISAQTVI*VFSMKY Trigger: GTATTTCATCGAGAACACCAATATCACAGTTTGTGC...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCAAAGAGTACTCATTTTaGTTGATAACCCTGCATGCG | + |
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Preference number: 5 (lower is better) Translates to: NKRIERALKTWYFCQYISKEYSF*LITLHA Trigger: CGCATGCAGGGTTATCAACAAAAATGAGTACTCTTT...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | AATAAAAGAATTGAGAGGGCATTGAAGACATGGTATTTCTGCCAGTACATTTCCAGATGTCATCATTCCTaGGCGTATTCTTCTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: NKRIERALKTWYFCQYISRCHHS*AYSSEF Trigger: AAATTCAGAAGAATACGCCAAGGAATGATGACATCT...GGAAATGTACTGGCAGAAATACCATGTCTTCAATGCCCTCTCAATTCTTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTGACTTCTCATCTTCTTTTTGCTTGTCAACAGAGTTAATACCGACTAATAAAGAGTACTCATTTTaGTTGATAACCCTGCATGCG | + |
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Preference number: 5 (lower is better) Translates to: TLDFSSSFCLSTELIPTNKEYSF*LITLHA Trigger: CGCATGCAGGGTTATCAACAAAAATGAGTACTCTTT...ATTAGTCGGTATTAACTCTGTTGACAAGCAAAAAGAAGATGAGAAGTCAAGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 90 bp | AAACTAGCCAAGCCAGCCATCAGCCAGATGATGATGCAGGTGACTTaGGCGACCAGCATTGTGCGTCGGAGGCGAGACTTCATTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: KLAKPAISQMMMQVT*ATSIVRRRRDFIGW Trigger: CCACCCAATGAAGTCTCGCCTCCGACGCACAATGCTGGTCGCCAAAGTCACCTGCATCATCATCTGGCTGATGGCTGGCTTGGCTAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS TCA 72 bp | TTGAAACTGACGCTGGCCGAAGCGATCTTACATAGGTaGTTGCCGAAGGGCCACTGGTATTCCATAGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: LKLTLAEAILHR*LPKGHWYSIAV Trigger: TACCGCTATGGAATACCAGTGGCCCTTCGGCAATCACCTATGTAAGATCGCTTCGGCCAGCGTCAGTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CCA 72 bp | GTGATATTGGTGTTCTCGATGAAATACACATTTCGGTaGATGACGGCCGGCAAACTAGCCAAGCCAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: VILVFSMKYTFR*MTAGKLAKPAI Trigger: GATGGCTGGCTTGGCTAGTTTGCCGGCCGTCATCCACCGAAATGTGTATTTCATCGAGAACACCAATATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 72 bp | TATCTGAAGGGCGGTAGGAAAGAGTACTCATTTTTGTaGATAACCCTGCATGCGACCTGGCCTTTGGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: YLKGGRKEYSFL*ITLHATWPLGE Trigger: TTCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAACAAAAATGAGTACTCTTTCCTACCGCCCTTCAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 72 bp | TGTTATCTGAAGGGCGGTAGGAAAGAGTACTCATTTTaGTTGATAACCCTGCATGCGACCTGGCCTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CYLKGGRKEYSF*LITLHATWPLG Trigger: CCCCAAAGGCCAGGTCGCATGCAGGGTTATCAACAAAAATGAGTACTCTTTCCTACCGCCCTTCAGATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 90 bp | ACGAGCTCATGTTATCTGAAGGGCGGTAGGAAAGAGTACTCATTTTaGTTGATAACCCTGCATGCGACCTGGCCTTTGGGGGAATATATT | + |
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Preference number: 6 (lower is better) Translates to: TSSCYLKGGRKEYSF*LITLHATWPLGEYI Trigger: AATATATTCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAACAAAAATGAGTACTCTTTCCTACCGCCCTTCAGATAACATGAGCTCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CCA 72 bp | GAGTACTCATTTTTGTTGATAACCCTGCATGCGACCTaGCCTTTGGGGGAATATATTTCAGAAGCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: EYSFLLITLHAT*PLGEYISEAGG Trigger: TCCTCCAGCTTCTGAAATATATTCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAACAAAAATGAGTACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 90 bp | AGCTCATGTTATCTGAAGGGCGGTAGGAAAGAGTACTCATTTTTGTaGATAACCCTGCATGCGACCTGGCCTTTGGGGGAATATATTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSCYLKGGRKEYSFL*ITLHATWPLGEYIS Trigger: TGAAATATATTCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAACAAAAATGAGTACTCTTTCCTACCGCCCTTCAGATAACATGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 72 bp | GAATGTTCTTGGTCAGACCCAGTCCAATGGGGAGTGTaGAGTTCTGAGATTCATAATGAAAAGCACAAACTG | + |
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Preference number: 6 (lower is better) Translates to: ECSWSDPVQWGV*SSEIHNEKHKL Trigger: CAGTTTGTGCTTTTCATTATGAATCTCAGAACTCAACACTCCCCATTGGACTGGGTCTGACCAAGAACATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 72 bp | TCATTTTTGTTGATAACCCTGCATGCGACCTGGCCTTaGGGGGAATATATTTCAGAAGCTGGAGGAAATATC | + |
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Preference number: 6 (lower is better) Translates to: SFLLITLHATWP*GEYISEAGGNI Trigger: GATATTTCCTCCAGCTTCTGAAATATATTCCCCCAAAGGCCAGGTCGCATGCAGGGTTATCAACAAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS TCA 72 bp | AATGTTCTTGGTCAGACCCAGTCCAATGGGGAGTGTTaGGTTCTGAGATTCATAATGAAAAGCACAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: NVLGQTQSNGEC*VLRFIMKSTNC Trigger: ACAGTTTGTGCTTTTCATTATGAATCTCAGAACTCAACACTCCCCATTGGACTGGGTCTGACCAAGAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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| CDS CAA 90 bp | CATGACAAATATGTAATTGTGCCTGCCAGCCTTGGGGCAGTCATCTaGGATTCTTTTAATTCCATCTTCAATAGAAGAGTTAAGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: HDKYVIVPASLGAVI*DSFNSIFNRRVKDH Trigger: ATGATCCTTAACTCTTCTATTGAAGATGGAATTAAAAGAATCCAAGATGACTGCCCCAAGGCTGGCAGGCACAATTACATATTTGTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068316.8 ENSMUST00000163776.3 |
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