RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031980

Ensembl transcript IDs: ENSMUST00000063278.7, ENSMUST00000238882.2

Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAAATTTCTTCCAGAGTGGCAGTCCTGTGCAGAGTGCCAGCTTCTaGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCT +
Preference number: 1 (lower is better)
Translates to: PNFFQSGSPVQSASF*LSPQYPNKPTSQEA
Trigger: AGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCCACTCTGGAAGAAATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
3UTR-3UTR GCA 90 bp GGCAGTCCTGTGCAGAGTGCCAGCTTCTGGCTGTCACCCCAGTATCCAAACAAACATCCCAGGAGGCTCTaGTGCTCATCATTTATTCTC +
Preference number: 2 (lower is better)
Translates to: GSPVQSASFWLSPQYPNKHPRRL*CSSFIL
Trigger: GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATG...TTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
3UTR CCA 72 bp TTCCAGAGTGGCAGTCCTGTGCAGAGTGCCAGCTTCTaGCTGTCACCCCAGTATCCAAACAAACCCACATCC +
Preference number: 3 (lower is better)
Translates to: FQSGSPVQSASF*LSPQYPNKPTS
Trigger: GGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCCACTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
3UTR GCA 72 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTaGTCATCATTTATTCTCGGTCAGCGCAGTCTCCAA +
Preference number: 3 (lower is better)
Translates to: SIQTNPHPRRLC*SSFILGQRSLQ
Trigger: TTGGAGACTGCGCTGACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp GGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGATCCAGTGCCTCCGGTaGGCCAGGCTGCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: GQRSLQGDGLCRATRRDGIQCLR*ARLLDR
Trigger: TCTGTCCAGCAGCCTGGCTCACCGGAGGCACTGGAT...CCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp AGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGCACCCTGTCGAGATCTaGGGTGCAGTGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SLQGDGLCRATRRDGEPGHPVEI*GAVGLD
Trigger: ATCCAGCCCCACTGCACCTCAGATCTCGACAGGGTG...CCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp AGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGAGATGCAGAAGATGGTaGCCTTCAGGCCTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SLQGDGLCRATRRDGEPGRCRRW*PSGLPP
Trigger: CGGGGGCAGGCCTGAAGGCCACCATCTTCTGCATCT...CCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp GGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGAGAGGATGGCCCCACTaGCCCCACTTCCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GQRSLQGDGLCRATRRDGRGWPH*PHFLPH
Trigger: ATGAGGCAGGAAGTGGGGCCAGTGGGGCCATCCTCT...CCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp GGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGAGCAGCGTCTGCAGCTaGCTGGCCGTGGGATCTAAG +
Preference number: 4 (lower is better)
Translates to: GQRSLQGDGLCRATRRDGSSVCS*LAVGSK
Trigger: CTTAGATCCCACGGCCAGCCAGCTGCAGACGCTGCT...CCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp AGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGTGGGTGTCACTCCAGTaGTGGAAGTTGCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SLQGDGLCRATRRDGEPGWVSLQ*WKLPVP
Trigger: CGGCACTGGCAACTTCCAGCACTGGAGTGACACCCA...CCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGTAGCAGGGGTGTCTaGCTGCTGCTCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: YSRSAQSPRRRPLPRYKACSRGV*LLLPPW
Trigger: CCAGGGTGGGAGCAGCAGCCAGACACCCCTGCTACA...CGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp CTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGTGACAGCACTGAGTTTTTGCTCCCACCCTGGGTaGCCAGCAAGCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LCRATRRDGEPGVTALSFCSHPG*PASPEW
Trigger: CCATTCAGGGCTTGCTGGTCACCCAGGGTGGGAGCA...AAAACTCAGTGCTGTCACCCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp CTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGTGACAGCACTGAGTTTTATCCAGTGCCTCCGGTaGGCCAGGCTGCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LCRATRRDGEPGVTALSFIQCLR*ARLLDR
Trigger: TCTGTCCAGCAGCCTGGCTCACCGGAGGCACTGGAT...AAAACTCAGTGCTGTCACCCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp AGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGCATCTAGTCGGGAGGTaGAGTCTCCCTCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SLQGDGLCRATRRDGEPGHLVGR*SLPPSQ
Trigger: CTGTGAAGGAGGGAGACTGCACCTCCCGACTAGATG...CCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp ACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCAGCGCAGTCGTGACCAGCAAGCCCTaGATGGCCCGCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: THIPGGSAAHHLFSVSAVVTSKP*MARRAA
Trigger: CGCTGCCCTGCGGGCCATTCAGGGCTTGCTGGTCAC...GACTGCGCTGACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp TATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGGAAAGCCTGGAGCAGTaGAGAGCCCCACCACAATGG +
Preference number: 4 (lower is better)
Translates to: YSRSAQSPRRRPLPRYKAESLEQ*RAPPQW
Trigger: CCATTGTGGTGGGGCTCTTCACTGCTCCAGGCTTTC...CGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp TATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGCGAACAGGAAGGGGCTaGTCAGGGTCACATCCAGTG +
Preference number: 4 (lower is better)
Translates to: YSRSAQSPRRRPLPRYKARTGRG*SGSHPV
Trigger: CACTGGATGTGACCCTGAGCAGCCCCTTCCTGTTCG...CGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp CTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGTGACAGCACTGAGTTTTCTGGGGTTCTCCAGCTaGGCGCAGGTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LCRATRRDGEPGVTALSFLGFSS*AQVLLL
Trigger: CAACAAGAGCACCTGCGCCCAGCTGGAGAACCCCAG...AAAACTCAGTGCTGTCACCCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGCAGTGCCGGAGATCATaGGCACAGACACCGAGATGC +
Preference number: 4 (lower is better)
Translates to: YSRSAQSPRRRPLPRYKAQCRRS*AQTPRC
Trigger: GCATCTCGGTGTCTGTGCCCATGATCTCCGGCACTG...CGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp GGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGTCAGCATCTTGTACATaGGGAAGCCCACGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GQRSLQGDGLCRATRRDGSASCT*GSPRSW
Trigger: CCAACTTCGTGGGCTTCCGCATGTACAAGATGCTGA...CCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp GGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGACTGGCCCCACTTCCTaGCTCATTCAGCATCTTGTA +
Preference number: 4 (lower is better)
Translates to: GQRSLQGDGLCRATRRDGTGPTS*LIQHLV
Trigger: TACAAGATGCTGAATGAGGCAGGAAGTGGGGCCAGT...CCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp GGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGCTGTTCCTCCTCTCCTaGTTTGAGTTCGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GQRSLQGDGLCRATRRDGLFLLS*FEFEED
Trigger: ATCCTCCTCGAACTCAAAGCAGGAGAGGAGGAACAG...CCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp CTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGTGACAGCACTGAGTTTTTCACAGGGGAGGTCTTaGCCTGAATGGGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LCRATRRDGEPGVTALSFSQGRS*PEWAQA
Trigger: AGCCTGTGCCCATTCAGGCCAAGACCTCCCCTGTGA...AAAACTCAGTGCTGTCACCCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TTATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCCAGTGCCGGAGATCATaGGCACAGACACCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LFSVSAVSKETASAALQGQCRRS*AQTPRC
Trigger: GCATCTCGGTGTCTGTGCCCATGATCTCCGGCACTG...GCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TTATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGTCACTCCAGTGCTaGAAGTTGCCAGTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LFSVSAVSKETASAALQGVSLQC*KLPVPE
Trigger: CTCCGGCACTGGCAACTTCCAGCACTGGAGTGACAC...GCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp CTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGTGACAGCACTGAGTTTTAGATCTGAGGTGCAGTaGGGCTGGATGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LCRATRRDGEPGVTALSFRSEVQ*GWMSSR
Trigger: CCTGCTGCTCATCCAGCCCCACTGCACCTCAGATCT...AAAACTCAGTGCTGTCACCCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TTATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCAGGTCTTGGCCTGAATaGGCACAGGCTCGAACGTTG +
Preference number: 4 (lower is better)
Translates to: LFSVSAVSKETASAALQGRSWPE*AQARTL
Trigger: CAACGTTCGAGCCTGTGCCCATTCAGGCCAAGACCT...GCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp GGCAGTCCTGTGCAGAGTGCCAGCTTCTGGCTGTCACCCCAGTATCCAAACAAAGAGGTGCAGTGGGGCTaGATGAGCAGCAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSPVQSASFWLSPQYPNKEVQWG*MSSRVA
Trigger: AGCCACCCTGCTGCTCATCCAGCCCCACTGCACCTC...TTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp ACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCAGCGCAGTCGAGGTGCAGTGGGGCTaGATGAGCAGCAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: THIPGGSAAHHLFSVSAVEVQWG*MSSRVA
Trigger: AGCCACCCTGCTGCTCATCCAGCCCCACTGCACCTC...GACTGCGCTGACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp TTATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCTGGACTCCAGGCAGCTaGGAGAAACCTCTCATCGTT +
Preference number: 4 (lower is better)
Translates to: LFSVSAVSKETASAALQGWTPGS*EKPLIV
Trigger: AACGATGAGAGGTTTCTCTCAGCTGCCTGGAGTCCA...GCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp GGCAGTCCTGTGCAGAGTGCCAGCTTCTGGCTGTCACCCCAGTATCCAAACAAACACCCTGTCGAGATCTaGGGTGCAGTGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GSPVQSASFWLSPQYPNKHPVEI*GAVGLD
Trigger: ATCCAGCCCCACTGCACCTCAGATCTCGACAGGGTG...TTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCCGAACAGGAAGGGGCTaGTCAGGGTCACATCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCRTGRG*SGSHPV
Trigger: CACTGGATGTGACCCTGAGCAGCCCCTTCCTGTTCG...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCACTCTGCCCAGAAAGTaGAGCGTGCCTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCTLPRK*SVPESC
Trigger: GCAGGACTCAGGCACGCTGCACTTTCTGGGCAGAGT...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp ACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCAGCGCAGTCAGATGCAGAAGATGGTaGCCTTCAGGCCTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: THIPGGSAAHHLFSVSAVRCRRW*PSGLPP
Trigger: CGGGGGCAGGCCTGAAGGCCACCATCTTCTGCATCT...GACTGCGCTGACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp GGCAGTCCTGTGCAGAGTGCCAGCTTCTGGCTGTCACCCCAGTATCCAAACAAATCACAGGGGAGGTCTTaGCCTGAATGGGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: GSPVQSASFWLSPQYPNKSQGRS*PEWAQA
Trigger: AGCCTGTGCCCATTCAGGCCAAGACCTCCCCTGTGA...TTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGCAAGAACTGGGTCAGTaGATAAATCCAGAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: YSRSAQSPRRRPLPRYKAQELGQ*INPESV
Trigger: CACGCTCTCTGGATTTATCCACTGACCCAGTTCTTG...CGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGTGACCAGCAAGCCCTaGATGGCCCGCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILVTSKP*MARRAA
Trigger: CGCTGCCCTGCGGGCCATTCAGGGCTTGCTGGTCAC...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCCTGGTGGTGAGAGGATaGCCCCACTGGCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SKQTHIPGGSAAHHLFSVLVVRG*PHWPHF
Trigger: GAAGTGGGGCCAGTGGGGCCATCCTCTCACCACCAG...GACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TTATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCCAAGAACTGGGTCAGTaGATAAATCCAGAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LFSVSAVSKETASAALQGQELGQ*INPESV
Trigger: CACGCTCTCTGGATTTATCCACTGACCCAGTTCTTG...GCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCAGCATCTTGTACATaGGGAAGCCCACGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCSASCT*GSPRSW
Trigger: CCAACTTCGTGGGCTTCCGCATGTACAAGATGCTGA...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCACTGGCCCCACTTCCTaGCTCATTCAGCATCTTGTA +
Preference number: 4 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCTGPTS*LIQHLV
Trigger: TACAAGATGCTGAATGAGGCAGGAAGTGGGGCCAGT...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp TCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCAGAGGATGGCCCCACTaGCCCCACTTCCTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SKQTHIPGGSAAHHLFSVRGWPH*PHFLPH
Trigger: ATGAGGCAGGAAGTGGGGCCAGTGGGGCCATCCTCT...GACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp ACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCAGCGCAGTCCTCCCACTCGGGGGTTaGTGTCACCAATGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: THIPGGSAAHHLFSVSAVLPLGG*CHQCCS
Trigger: TGAACAACATTGGTGACACCAACCCCCGAGTGGGAG...GACTGCGCTGACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCTGCTCCCACCCTGGGTaGCCAGCAAGCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILCSHPG*PASPEW
Trigger: CCATTCAGGGCTTGCTGGTCACCCAGGGTGGGAGCA...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp GGCAGTCCTGTGCAGAGTGCCAGCTTCTGGCTGTCACCCCAGTATCCAAACAAAGCACAGACACCGAGATaGTGTTGTCCACCCAGAATT +
Preference number: 4 (lower is better)
Translates to: GSPVQSASFWLSPQYPNKAQTPR*CCPPRI
Trigger: AATTCTGGGTGGACAACAGCATCTCGGTGTCTGTGC...TTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp TCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCACTCTGCCCAGAAAGTaGAGCGTGCCTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKQTHIPGGSAAHHLFSVTLPRK*SVPESC
Trigger: GCAGGACTCAGGCACGCTGCACTTTCTGGGCAGAGT...GACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCCTGGTGGTGAGAGGATaGCCCCACTGGCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILLVVRG*PHWPHF
Trigger: GAAGTGGGGCCAGTGGGGCCATCCTCTCACCACCAG...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCTGTAGCAGGGGTGTCTaGCTGCTGCTCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILCSRGV*LLLPPW
Trigger: CCAGGGTGGGAGCAGCAGCCAGACACCCCTGCTACA...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCAAGAGAGCCAGGCTCTaGACAAATGAGTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCKRARL*TNECFR
Trigger: TCTAAAGCACTCATTTGTTCAGAGCCTGGCTCTCTT...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCCTGGGGTTCTCCAGCTaGGCGCAGGTGCTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILLGFSS*AQVLLL
Trigger: CAACAAGAGCACCTGCGCCCAGCTGGAGAACCCCAG...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCTGGGTGTCACTCCAGTaGTGGAAGTTGCCAGTGCCG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILWVSLQ*WKLPVP
Trigger: CGGCACTGGCAACTTCCAGCACTGGAGTGACACCCA...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGTGTCACTCCAGTGCTaGAAGTTGCCAGTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILVSLQC*KLPVPE
Trigger: CTCCGGCACTGGCAACTTCCAGCACTGGAGTGACAC...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCAGATCTGAGGTGCAGTaGGGCTGGATGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILRSEVQ*GWMSSR
Trigger: CCTGCTGCTCATCCAGCCCCACTGCACCTCAGATCT...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCCTCCCACTCGGGGGTTaGTGTCACCAATGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILLPLGG*CHQCCS
Trigger: TGAACAACATTGGTGACACCAACCCCCGAGTGGGAG...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp TCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCAAGAGAGCCAGGCTCTaGACAAATGAGTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SKQTHIPGGSAAHHLFSVKRARL*TNECFR
Trigger: TCTAAAGCACTCATTTGTTCAGAGCCTGGCTCTCTT...GACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGCACAGACACCGAGATaGTGTTGTCCACCCAGAATT +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILAQTPR*CCPPRI
Trigger: AATTCTGGGTGGACAACAGCATCTCGGTGTCTGTGC...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR GCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCCTGTTCCTCCTCTCCTaGTTTGAGTTCGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILLFLLS*FEFEED
Trigger: ATCCTCCTCGAACTCAAAGCAGGAGAGGAGGAACAG...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR TCA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCAGTGAACGTAGGTGTTaGAAAGTAGGGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILSERRC*KVGCCL
Trigger: CAGACAGCACCCTACTTTTCAACACCTACGTTCACT...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 90 bp AGGGGTGTCTGGCTGCTGCTCCCACCCTGGGTGACCAGCAAGCCCTaGATGGCCCGCAGGGCAGCGAGGACCTTGTGTCCATCTAGTCGG +
Preference number: 5 (lower is better)
Translates to: RGVWLLLPPWVTSKP*MARRAARTLCPSSR
Trigger: CCGACTAGATGGACACAAGGTCCTCGCTGCCCTGCGGGCCATTCAGGGCTTGCTGGTCACCCAGGGTGGGAGCAGCAGCCAGACACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 90 bp GGCGAACAGGAAGGGGCTGCTCAGGGTCACATCCAGTGCCTCCGGTaGGCCAGGCTGCTGGACAGACGTGGTCGGCTGTTCCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GEQEGAAQGHIQCLR*ARLLDRRGRLFLLS
Trigger: GGAGAGGAGGAACAGCCGACCACGTCTGTCCAGCAGCCTGGCTCACCGGAGGCACTGGATGTGACCCTGAGCAGCCCCTTCCTGTTCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 90 bp CAGGAGGTCGTTCCGGAAGATGAGGGCCTCCACCCTGTCGAGATCTaGGGTGCAGTGGGGCTGGATGAGCAGCAGGGTGGCTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: QEVVPEDEGLHPVEI*GAVGLDEQQGGSLT
Trigger: GGTGAGAGAGCCACCCTGCTGCTCATCCAGCCCCACTGCACCTCAGATCTCGACAGGGTGGAGGCCCTCATCTTCCGGAACGACCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp TGGCCCGCAGGGCAGCGAGGACCTTGTGTCCATCTAGTCGGGAGGTaGAGTCTCCCTCCTTCACAGGGACATCCAGCAGCGTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: WPAGQRGPCVHLVGR*SLPPSQGHPAASAA
Trigger: AGCTGCAGACGCTGCTGGATGTCCCTGTGAAGGAGGGAGACTGCACCTCCCGACTAGATGGACACAAGGTCCTCGCTGCCCTGCGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp AAGATGAGGGCCTCCACCCTGTCGAGATCTGAGGTGCAGTGGGGCTaGATGAGCAGCAGGGTGGCTCTCTCACCTAGGGGCACGCACGTC +
Preference number: 5 (lower is better)
Translates to: KMRASTLSRSEVQWG*MSSRVALSPRGTHV
Trigger: GACGTGCGTGCCCCTAGGTGAGAGAGCCACCCTGCTGCTCATCCAGCCCCACTGCACCTCAGATCTCGACAGGGTGGAGGCCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp GGGCTGCTCAGGGTCACATCCAGTGCCTCCGGTGAGCCAGGCTGCTaGACAGACGTGGTCGGCTGTTCCTCCTCTCCTGCTTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: GLLRVTSSASGEPGC*TDVVGCSSSPALSS
Trigger: CGAACTCAAAGCAGGAGAGGAGGAACAGCCGACCACGTCTGTCCAGCAGCCTGGCTCACCGGAGGCACTGGATGTGACCCTGAGCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 90 bp GGAGATGGAAGGGGTGGATGTATACGCGGTCCCCAGCCGTCAGGCTaGCCCAGGTCAAGATGCAGAAGATGGTGGCCTTCAGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: GDGRGGCIRGPQPSG*PRSRCRRWWPSGLP
Trigger: GGGCAGGCCTGAAGGCCACCATCTTCTGCATCTTGACCTGGGTCAGCCTGACGGCTGGGGACCGCGTATACATCCACCCCTTCCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp AAGGGGCTGCTCAGGGTCACATCCAGTGCCTCCGGTGAGCCAGGCTaGTGGACAGACGTGGTCGGCTGTTCCTCCTCTCCTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: KGLLRVTSSASGEPG*WTDVVGCSSSPALS
Trigger: ACTCAAAGCAGGAGAGGAGGAACAGCCGACCACGTCTGTCCAGCAGCCTGGCTCACCGGAGGCACTGGATGTGACCCTGAGCAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp TATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGAAAAGGGTGGGCAGCTaGTCCTCAGCCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: YSRSAQSPRRRPLPRYKAKRVGS*SSASRS
Trigger: GGACCTGCTGGCTGAGGACAAGCTGCCCACCCTTTT...CGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 90 bp GAGGAGGCGGGTTCTCTATCCAAGTCAGGAGGTCGTTCCGGAAGATaGGGGCCTCCACCCTGTCGAGATCTGAGGTGCAGTGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: EEAGSLSKSGGRSGR*GPPPCRDLRCSGAG
Trigger: TCCAGCCCCACTGCACCTCAGATCTCGACAGGGTGGAGGCCCTCATCTTCCGGAACGACCTCCTGACTTGGATAGAGAACCCGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp TGGCCCCACTGGCCCCACTTCCTGCCTCATTCAGCATCTTGTACATaGGGAAGCCCACGAAGTTGGCGATCATTGCGACCTGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: WPHWPHFLPHSASCT*GSPRSWRSLRPGQP
Trigger: GGGCTGCCCAGGTCGCAATGATCGCCAACTTCGTGGGCTTCCGCATGTACAAGATGCTGAATGAGGCAGGAAGTGGGGCCAGTGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp GGCTGGCCGTGGGATCTAAGGATCCAAGGTAGAAAGAGACCAGGGTaGCAAAGAGAGCTGGTGGTGAGAGGATGGCCCCACTGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: GWPWDLRIQGRKRPG*QRELVVRGWPHWPH
Trigger: GTGGGGCCAGTGGGGCCATCCTCTCACCACCAGCTCTCTTTGGCACCCTGGTCTCTTTCTACCTTGGATCCTTAGATCCCACGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp TCACTCTGCCCAGAAAGTGCAGCGTGCCTGAGTCCTGCTCGTAGATaGCGAACAGGAAGGGGCTGCTCAGGGTCACATCCAGTGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SLCPESAACLSPARR*RTGRGCSGSHPVPP
Trigger: CGGAGGCACTGGATGTGACCCTGAGCAGCCCCTTCCTGTTCGCCATCTACGAGCAGGACTCAGGCACGCTGCACTTTCTGGGCAGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 90 bp ATTCACAGGGGAGGTCTTGGCCTGAATGGGCACAGGCTCGAACGTTaGCTCTGGGAGTGTCTCCACACTGGGGTTCTCCAGCTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: IHRGGLGLNGHRLER*LWECLHTGVLQLGA
Trigger: TGCGCCCAGCTGGAGAACCCCAGTGTGGAGACACTCCCAGAGTCAACGTTCGAGCCTGTGCCCATTCAGGCCAAGACCTCCCCTGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp AGGGGCACGCACGTCACGGAGAAGTTGTTCTGGGTGTCACTCCAGTaGTGGAAGTTGCCAGTGCCGGAGATCATGGGCACAGACACCGAG +
Preference number: 5 (lower is better)
Translates to: RGTHVTEKLFWVSLQ*WKLPVPEIMGTDTE
Trigger: CTCGGTGTCTGTGCCCATGATCTCCGGCACTGGCAACTTCCAGCACTGGAGTGACACCCAGAACAACTTCTCCGTGACGTGCGTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp GATTGTAGGATCCTCGGATTTCCAGCTGGGGCAGAGTCAGGCGGATaGCCCGAGGAGGCGGGTTCTCTATCCAAGTCAGGAGGTCGTTCC +
Preference number: 5 (lower is better)
Translates to: DCRILGFPAGAESGG*PEEAGSLSKSGGRS
Trigger: GGAACGACCTCCTGACTTGGATAGAGAACCCGCCTCCTCGGGCCATCCGCCTGACTCTGCCCCAGCTGGAAATCCGAGGATCCTACAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp AGTCTCCCTCCTTCACAGGGACATCCAGCAGCGTCTGCAGCTGGCTaGCCGTGGGATCTAAGGATCCAAGGTAGAAAGAGACCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: SLPPSQGHPAASAAG*PWDLRIQGRKRPGC
Trigger: GCACCCTGGTCTCTTTCTACCTTGGATCCTTAGATCCCACGGCCAGCCAGCTGCAGACGCTGCTGGATGTCCCTGTGAAGGAGGGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp GGCACGCACGTCACGGAGAAGTTGTTCTGGGTGTCACTCCAGTGCTaGAAGTTGCCAGTGCCGGAGATCATGGGCACAGACACCGAGATG +
Preference number: 5 (lower is better)
Translates to: GTHVTEKLFWVSLQC*KLPVPEIMGTDTEM
Trigger: CATCTCGGTGTCTGTGCCCATGATCTCCGGCACTGGCAACTTCCAGCACTGGAGTGACACCCAGAACAACTTCTCCGTGACGTGCGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp AACCTCTCCCACTCGGGGGTTGGTGTCACCAATGTTGTTCAGATTTaGCTCCGCACCCAAAAGGGTGGGCAGCTTGTCCTCAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: NLSHSGVGVTNVVQI*LRTQKGGQLVLSQQ
Trigger: CTGCTGGCTGAGGACAAGCTGCCCACCCTTTTGGGTGCGGAGGCAAATCTGAACAACATTGGTGACACCAACCCCCGAGTGGGAGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp ACACCACACTCTGGGGGTTATTCACTCTGCCCAGAAAGTGCAGCGTaGCTGAGTCCTGCTCGTAGATGGCGAACAGGAAGGGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: TPHSGGYSLCPESAA*LSPARRWRTGRGCS
Trigger: TGAGCAGCCCCTTCCTGTTCGCCATCTACGAGCAGGACTCAGGCACGCTGCACTTTCTGGGCAGAGTGAATAACCCCCAGAGTGTGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp CTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGTGACAGCACTGAGTTTTGACACCGAGATGCTGTaGTCCACCCAGAATTCATGG +
Preference number: 5 (lower is better)
Translates to: LCRATRRDGEPGVTALSFDTEML*STQNSW
Trigger: CCATGAATTCTGGGTGGACAACAGCATCTCGGTGTC...AAAACTCAGTGCTGTCACCCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp TTATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGACACCGAGATGCTGTaGTCCACCCAGAATTCATGG +
Preference number: 5 (lower is better)
Translates to: LFSVSAVSKETASAALQGDTEML*STQNSW
Trigger: CCATGAATTCTGGGTGGACAACAGCATCTCGGTGTC...GCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCCTCCAGTGCTGGAAGTaGCCAGTGCCGGAGATCATG +
Preference number: 5 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCLQCWK*PVPEIM
Trigger: CATGATCTCCGGCACTGGCAACTTCCAGCACTGGAG...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp ACTCTGGGAGTGTCTCCACACTGGGGTTCTCCAGCTGGGCGCAGGTaGTCTTGTTGTGGTAAAGGAGATGGAAGGGGTGGATGTATACGC +
Preference number: 5 (lower is better)
Translates to: TLGVSPHWGSPAGRR*SCCGKGDGRGGCIR
Trigger: GCGTATACATCCACCCCTTCCATCTCCTTTACCACAACAAGAGCACCTGCGCCCAGCTGGAGAACCCCAGTGTGGAGACACTCCCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp GCTGGAAGTTGCCAGTGCCGGAGATCATGGGCACAGACACCGAGATaGTGTTGTCCACCCAGAATTCATGGACTCCAGGCAGCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: AGSCQCRRSWAQTPR*CCPPRIHGLQAAER
Trigger: TCTCTCAGCTGCCTGGAGTCCATGAATTCTGGGTGGACAACAGCATCTCGGTGTCTGTGCCCATGATCTCCGGCACTGGCAACTTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp GATCATGCAGGGTCTTCTCATTCACAGGGGAGGTCTTGGCCTGAATaGGCACAGGCTCGAACGTTGACTCTGGGAGTGTCTCCACACTGG +
Preference number: 5 (lower is better)
Translates to: DHAGSSHSQGRSWPE*AQARTLTLGVSPHW
Trigger: CCAGTGTGGAGACACTCCCAGAGTCAACGTTCGAGCCTGTGCCCATTCAGGCCAAGACCTCCCCTGTGAATGAGAAGACCCTGCATGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp AGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGCCTTTATGAACCTGTaGATTTTCTCAGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: SLQGDGLCRATRRDGEPGAFMNL*IFSVAR
Trigger: TCTTGCCACTGAGAAAATCAACAGGTTCATAAAGGC...CCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCCACGTCACGGAGAAGTaGTTCTGGGTGTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCHVTEK*FWVSLQ
Trigger: CTGGAGTGACACCCAGAACAACTTCTCCGTGACGTG...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 90 bp ACGTCACGGAGAAGTTGTTCTGGGTGTCACTCCAGTGCTGGAAGTTaGCAGTGCCGGAGATCATGGGCACAGACACCGAGATGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: TSRRSCSGCHSSAGS*QCRRSWAQTPRCCC
Trigger: ACAACAGCATCTCGGTGTCTGTGCCCATGATCTCCGGCACTGGCAACTTCCAGCACTGGAGTGACACCCAGAACAACTTCTCCGTGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp CTCTGCCGCGCTACAAGGCGTGATGGGGAGCCAGGGGTGACAGCACTGAGTTTTTTGGTGTCACCAATGTaGTTCAGATTTGCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: LCRATRRDGEPGVTALSFLVSPM*FRFASA
Trigger: TGCGGAGGCAAATCTGAACAACATTGGTGACACCAA...AAAACTCAGTGCTGTCACCCCTGGCTCCCCATCACGCCTTGTAGCGCGGCAGAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp GGCAGTCCTGTGCAGAGTGCCAGCTTCTGGCTGTCACCCCAGTATCCAAACAAATCTCCCACTCGGGGGTaGGTGTCACCAATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: GSPVQSASFWLSPQYPNKSPTRG*VSPMLF
Trigger: GAACAACATTGGTGACACCAACCCCCGAGTGGGAGA...TTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp ACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCGGTCAGCGCAGTCTCTCCCACTCGGGGGTaGGTGTCACCAATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: THIPGGSAAHHLFSVSAVSPTRG*VSPMLF
Trigger: GAACAACATTGGTGACACCAACCCCCGAGTGGGAGA...GACTGCGCTGACCGAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp TCTGGCTGTCACCCCAGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCCTCCTCTCCTGCTTaGAGTTCGAGGAGGATGCTA +
Preference number: 5 (lower is better)
Translates to: SGCHPSIQTNPHPRRLCCSSSPA*SSRRML
Trigger: TAGCATCCTCCTCGAACTCAAAGCAGGAGAGGAGGA...GCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACTGGGGTGACAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 90 bp TCCAGAGAGCGTGGGAAGAGGGCAGGGGTAAAGAGAGCCAGGCTCTaGACAAATGAGTGCTTTAGACGAAAGCCTGGAGCAGTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SRERGKRAGVKRARL*TNECFRRKPGAVKS
Trigger: GCTCTTCACTGCTCCAGGCTTTCGTCTAAAGCACTCATTTGTTCAGAGCCTGGCTCTCTTTACCCCTGCCCTCTTCCCACGCTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 90 bp TGGTGTCACCAATGTTGTTCAGATTTGCCTCCGCACCCAAAAGGGTaGGCAGCTTGTCCTCAGCCAGCAGGTCCTGCAGATTGTAGGATC +
Preference number: 5 (lower is better)
Translates to: WCHQCCSDLPPHPKG*AACPQPAGPADCRI
Trigger: GATCCTACAATCTGCAGGACCTGCTGGCTGAGGACAAGCTGCCCACCCTTTTGGGTGCGGAGGCAAATCTGAACAACATTGGTGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp GGCAGTCCTGTGCAGAGTGCCAGCTTCTGGCTGTCACCCCAGTATCCAAACAAATCCTCCTCTCCTGCTTaGAGTTCGAGGAGGATGCTA +
Preference number: 5 (lower is better)
Translates to: GSPVQSASFWLSPQYPNKSSSPA*SSRRML
Trigger: TAGCATCCTCCTCGAACTCAAAGCAGGAGAGGAGGA...TTTGTTTGGATACTGGGGTGACAGCCAGAAGCTGGCACTCTGCACAGGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp TTATTCTCGGTCAGCGCAGTCTCCAAGGAGACGGCCTCTGCCGCGCTACAAGGCGCCTTTATGAACCTGTaGATTTTCTCAGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: LFSVSAVSKETASAALQGAFMNL*IFSVAR
Trigger: TCTTGCCACTGAGAAAATCAACAGGTTCATAAAGGC...GCCTTGTAGCGCGGCAGAGGCCGTCTCCTTGGAGACTGCGCTGACCGAGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCAAAAGGGTGGGCAGCTaGTCCTCAGCCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILKRVGS*SSASRS
Trigger: GGACCTGCTGGCTGAGGACAAGCTGCCCACCCTTTT...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCCACGTCACGGAGAAGTaGTTCTGGGTGTCACTCCAG +
Preference number: 5 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILHVTEK*FWVSLQ
Trigger: CTGGAGTGACACCCAGAACAACTTCTCCGTGACGTG...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS-3UTR CAA 90 bp AGTATCCAAACAAACCCACATCCCAGGAGGCTCTGCTGCTCATCATTTATTCTCTTGGTGTCACCAATGTaGTTCAGATTTGCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: SIQTNPHPRRLCCSSFILLVSPM*FRFASA
Trigger: TGCGGAGGCAAATCTGAACAACATTGGTGACACCAA...GAGAATAAATGATGAGCAGCAGAGCCTCCTGGGATGTGGGTTTGTTTGGATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 72 bp TGGCTGCTGCTCCCACCCTGGGTGACCAGCAAGCCCTaGATGGCCCGCAGGGCAGCGAGGACCTTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: WLLLPPWVTSKP*MARRAARTLCP
Trigger: TGGACACAAGGTCCTCGCTGCCCTGCGGGCCATTCAGGGCTTGCTGGTCACCCAGGGTGGGAGCAGCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 72 bp GTTCCGGAAGATGAGGGCCTCCACCCTGTCGAGATCTaGGGTGCAGTGGGGCTGGATGAGCAGCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: VPEDEGLHPVEI*GAVGLDEQQGG
Trigger: GCCACCCTGCTGCTCATCCAGCCCCACTGCACCTCAGATCTCGACAGGGTGGAGGCCCTCATCTTCCGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp CTCAGGGTCACATCCAGTGCCTCCGGTGAGCCAGGCTaGTGGACAGACGTGGTCGGCTGTTCCTCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: LRVTSSASGEPG*WTDVVGCSSSP
Trigger: AGGAGAGGAGGAACAGCCGACCACGTCTGTCCAGCAGCCTGGCTCACCGGAGGCACTGGATGTGACCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp GGGCAGCGAGGACCTTGTGTCCATCTAGTCGGGAGGTaGAGTCTCCCTCCTTCACAGGGACATCCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: GQRGPCVHLVGR*SLPPSQGHPAA
Trigger: CGCTGCTGGATGTCCCTGTGAAGGAGGGAGACTGCACCTCCCGACTAGATGGACACAAGGTCCTCGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 90 bp CATTCACAGGGGAGGTCTTGGCCTGAATGGGCACAGGCTCGAACGTaGACTCTGGGAGTGTCTCCACACTGGGGTTCTCCAGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: HSQGRSWPEWAQART*TLGVSPHWGSPAGR
Trigger: GCGCCCAGCTGGAGAACCCCAGTGTGGAGACACTCCCAGAGTCAACGTTCGAGCCTGTGCCCATTCAGGCCAAGACCTCCCCTGTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 72 bp ATCCTCGGATTTCCAGCTGGGGCAGAGTCAGGCGGATaGCCCGAGGAGGCGGGTTCTCTATCCAAGTCAGGA +
Preference number: 6 (lower is better)
Translates to: ILGFPAGAESGG*PEEAGSLSKSG
Trigger: TCCTGACTTGGATAGAGAACCCGCCTCCTCGGGCCATCCGCCTGACTCTGCCCCAGCTGGAAATCCGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 90 bp CCAGGCTGCTGGACAGACGTGGTCGGCTGTTCCTCCTCTCCTGCTTaGAGTTCGAGGAGGATGCTATTGAGAACCTCTCCCACTCGGGGG +
Preference number: 6 (lower is better)
Translates to: PGCWTDVVGCSSSPA*SSRRMLLRTSPTRG
Trigger: CCCCCGAGTGGGAGAGGTTCTCAATAGCATCCTCCTCGAACTCAAAGCAGGAGAGGAGGAACAGCCGACCACGTCTGTCCAGCAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 72 bp CCAGAAAGTGCAGCGTGCCTGAGTCCTGCTCGTAGATaGCGAACAGGAAGGGGCTGCTCAGGGTCACATCCA +
Preference number: 6 (lower is better)
Translates to: PESAACLSPARR*RTGRGCSGSHP
Trigger: TGGATGTGACCCTGAGCAGCCCCTTCCTGTTCGCCATCTACGAGCAGGACTCAGGCACGCTGCACTTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 72 bp GGGGTTATTCACTCTGCCCAGAAAGTGCAGCGTGCCTaGGTCCTGCTCGTAGATGGCGAACAGGAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GVIHSAQKVQRA*VLLVDGEQEGA
Trigger: AGCCCCTTCCTGTTCGCCATCTACGAGCAGGACTCAGGCACGCTGCACTTTCTGGGCAGAGTGAATAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp GTGTCTCCACACTGGGGTTCTCCAGCTGGGCGCAGGTaGTCTTGTTGTGGTAAAGGAGATGGAAGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: VSPHWGSPAGRR*SCCGKGDGRGG
Trigger: TCCACCCCTTCCATCTCCTTTACCACAACAAGAGCACCTGCGCCCAGCTGGAGAACCCCAGTGTGGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 72 bp CACTCCAGTGCTGGAAGTTGCCAGTGCCGGAGATCATaGGCACAGACACCGAGATGCTGTTGTCCACCCAGA +
Preference number: 6 (lower is better)
Translates to: HSSAGSCQCRRS*AQTPRCCCPPR
Trigger: TCTGGGTGGACAACAGCATCTCGGTGTCTGTGCCCATGATCTCCGGCACTGGCAACTTCCAGCACTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp TCATTCAGCATCTTGTACATGCGGAAGCCCACGAAGTaGGCGATCATTGCGACCTGGGCAGCCCGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SFSILYMRKPTK*AIIATWAARFR
Trigger: CCGGAAGCGGGCTGCCCAGGTCGCAATGATCGCCAACTTCGTGGGCTTCCGCATGTACAAGATGCTGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp GCTCTCTCACCTAGGGGCACGCACGTCACGGAGAAGTaGTTCTGGGTGTCACTCCAGTGCTGGAAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: ALSPRGTHVTEK*FWVSLQCWKLP
Trigger: TGGCAACTTCCAGCACTGGAGTGACACCCAGAACAACTTCTCCGTGACGTGCGTGCCCCTAGGTGAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp TGCCAGTGCCGGAGATCATGGGCACAGACACCGAGATaGTGTTGTCCACCCAGAATTCATGGACTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: CQCRRSWAQTPR*CCPPRIHGLQA
Trigger: TGCCTGGAGTCCATGAATTCTGGGTGGACAACAGCATCTCGGTGTCTGTGCCCATGATCTCCGGCACTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp CACGTCACGGAGAAGTTGTTCTGGGTGTCACTCCAGTaGTGGAAGTTGCCAGTGCCGGAGATCATGGGCACA +
Preference number: 6 (lower is better)
Translates to: HVTEKLFWVSLQ*WKLPVPEIMGT
Trigger: TGTGCCCATGATCTCCGGCACTGGCAACTTCCAGCACTGGAGTGACACCCAGAACAACTTCTCCGTGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp CACTCGGGGGTTGGTGTCACCAATGTTGTTCAGATTTaGCTCCGCACCCAAAAGGGTGGGCAGCTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: HSGVGVTNVVQI*LRTQKGGQLVL
Trigger: GAGGACAAGCTGCCCACCCTTTTGGGTGCGGAGGCAAATCTGAACAACATTGGTGACACCAACCCCCGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp TCTGGGGGTTATTCACTCTGCCCAGAAAGTGCAGCGTaGCTGAGTCCTGCTCGTAGATGGCGAACAGGAAGG +
Preference number: 6 (lower is better)
Translates to: SGGYSLCPESAA*LSPARRWRTGR
Trigger: CCTTCCTGTTCGCCATCTACGAGCAGGACTCAGGCACGCTGCACTTTCTGGGCAGAGTGAATAACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 72 bp GGGTCTTCTCATTCACAGGGGAGGTCTTGGCCTGAATaGGCACAGGCTCGAACGTTGACTCTGGGAGTGTCT +
Preference number: 6 (lower is better)
Translates to: GSSHSQGRSWPE*AQARTLTLGVS
Trigger: AGACACTCCCAGAGTCAACGTTCGAGCCTGTGCCCATTCAGGCCAAGACCTCCCCTGTGAATGAGAAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp CCACTCGGGGGTTGGTGTCACCAATGTTGTTCAGATTaGCCTCCGCACCCAAAAGGGTGGGCAGCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: PLGGWCHQCCSD*PPHPKGWAACP
Trigger: AGGACAAGCTGCCCACCCTTTTGGGTGCGGAGGCAAATCTGAACAACATTGGTGACACCAACCCCCGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp AGAACCTCTCCCACTCGGGGGTTGGTGTCACCAATGTaGTTCAGATTTGCCTCCGCACCCAAAAGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: RTSPTRGLVSPM*FRFASAPKRVG
Trigger: GCCCACCCTTTTGGGTGCGGAGGCAAATCTGAACAACATTGGTGACACCAACCCCCGAGTGGGAGAGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp AGAAGTTGTTCTGGGTGTCACTCCAGTGCTGGAAGTTaGCAGTGCCGGAGATCATGGGCACAGACACCGAGA +
Preference number: 6 (lower is better)
Translates to: RSCSGCHSSAGS*QCRRSWAQTPR
Trigger: TCTCGGTGTCTGTGCCCATGATCTCCGGCACTGGCAACTTCCAGCACTGGAGTGACACCCAGAACAACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS GCA 72 bp CTGCTGGACAGACGTGGTCGGCTGTTCCTCCTCTCCTaGTTTGAGTTCGAGGAGGATGCTATTGAGAACCTC +
Preference number: 6 (lower is better)
Translates to: LLDRRGRLFLLS*FEFEEDAIENL
Trigger: GAGGTTCTCAATAGCATCCTCCTCGAACTCAAAGCAGGAGAGGAGGAACAGCCGACCACGTCTGTCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 72 bp GATCATGCAGGGTCTTCTCATTCACAGGGGAGGTCTTaGCCTGAATGGGCACAGGCTCGAACGTTGACTCTG +
Preference number: 6 (lower is better)
Translates to: DHAGSSHSQGRS*PEWAQARTLTL
Trigger: CAGAGTCAACGTTCGAGCCTGTGCCCATTCAGGCCAAGACCTCCCCTGTGAATGAGAAGACCCTGCATGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CCA 72 bp CAATGTTGTTCAGATTTGCCTCCGCACCCAAAAGGGTaGGCAGCTTGTCCTCAGCCAGCAGGTCCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: QCCSDLPPHPKG*AACPQPAGPAD
Trigger: ATCTGCAGGACCTGCTGGCTGAGGACAAGCTGCCCACCCTTTTGGGTGCGGAGGCAAATCTGAACAACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp TCCTCCTCTCCTGCTTTGAGTTCGAGGAGGATGCTATaGAGAACCTCTCCCACTCGGGGGTTGGTGTCACCA +
Preference number: 6 (lower is better)
Translates to: SSSPALSSRRML*RTSPTRGLVSP
Trigger: TGGTGACACCAACCCCCGAGTGGGAGAGGTTCTCAATAGCATCCTCCTCGAACTCAAAGCAGGAGAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp TGGACAGACGTGGTCGGCTGTTCCTCCTCTCCTGCTTaGAGTTCGAGGAGGATGCTATTGAGAACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: WTDVVGCSSSPA*SSRRMLLRTSP
Trigger: GGGAGAGGTTCTCAATAGCATCCTCCTCGAACTCAAAGCAGGAGAGGAGGAACAGCCGACCACGTCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 90 bp GTCGGCTGTTCCTCCTCTCCTGCTTTGAGTTCGAGGAGGATGCTATaGAGAACCTCTCCCACTCGGGGGTTGGTGTCACCAATGTTGTTC +
Preference number: 6 (lower is better)
Translates to: VGCSSSPALSSRRML*RTSPTRGLVSPMLF
Trigger: GAACAACATTGGTGACACCAACCCCCGAGTGGGAGAGGTTCTCAATAGCATCCTCCTCGAACTCAAAGCAGGAGAGGAGGAACAGCCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS TCA 72 bp GAACAAATGAGTGCTTTAGACGAAAGCCTGGAGCAGTaGAGAGCCCCACCACAATGGACTGTAGCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: EQMSALDESLEQ*RAPPQWTVAGV
Trigger: CACCCCTGCTACAGTCCATTGTGGTGGGGCTCTTCACTGCTCCAGGCTTTCGTCTAAAGCACTCATTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp AGGAGGATGCTATTGAGAACCTCTCCCACTCGGGGGTaGGTGTCACCAATGTTGTTCAGATTTGCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: RRMLLRTSPTRG*VSPMLFRFASA
Trigger: TGCGGAGGCAAATCTGAACAACATTGGTGACACCAACCCCCGAGTGGGAGAGGTTCTCAATAGCATCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 90 bp TTGAGTTCGAGGAGGATGCTATTGAGAACCTCTCCCACTCGGGGGTaGGTGTCACCAATGTTGTTCAGATTTGCCTCCGCACCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: LSSRRMLLRTSPTRG*VSPMLFRFASAPKR
Trigger: CCTTTTGGGTGCGGAGGCAAATCTGAACAACATTGGTGACACCAACCCCCGAGTGGGAGAGGTTCTCAATAGCATCCTCCTCGAACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 90 bp AGTGGCAAGTTCATCTTCCACCCTGTCACAGCCTTTATGAACCTGTaGATTTTCTCAGTGGCAAGAACTGGGTCAGTGGATAAATCCAGA +
Preference number: 6 (lower is better)
Translates to: SGKFIFHPVTAFMNL*IFSVARTGSVDKSR
Trigger: TCTGGATTTATCCACTGACCCAGTTCTTGCCACTGAGAAAATCAACAGGTTCATAAAGGCTGTGACAGGGTGGAAGATGAACTTGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2
CDS CAA 72 bp TTCATCTTCCACCCTGTCACAGCCTTTATGAACCTGTaGATTTTCTCAGTGGCAAGAACTGGGTCAGTGGAT +
Preference number: 6 (lower is better)
Translates to: FIFHPVTAFMNL*IFSVARTGSVD
Trigger: ATCCACTGACCCAGTTCTTGCCACTGAGAAAATCAACAGGTTCATAAAGGCTGTGACAGGGTGGAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063278.7
ENSMUST00000238882.2