RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGPAT5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031467

Ensembl transcript IDs: ENSMUST00000033847.5, ENSMUST00000149565.8

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTTGGATGGCTAACCAGAGGCAGAAGGACCCAACATGGGGTGGGTaGTCTGCCTGCAGACAGGCTGGTGCCTACAAGAGGTGCAGAAGC +
Preference number: 1 (lower is better)
Translates to: GWMANQRQKDPTWGG*SACRQAGAYKRCRS
Trigger: GCTTCTGCACCTCTTGTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGGGTCCTTCTGCCTCTGGTTAGCCATCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp GCTGTCCAAGGTTGGATGGCTAACCAGAGGCAGAAGGACCCAACATaGGGTGGGTGGTCTGCCTGCAGACAGGCTGGTGCCTACAAGAGG +
Preference number: 1 (lower is better)
Translates to: AVQGWMANQRQKDPT*GGWSACRQAGAYKR
Trigger: CCTCTTGTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGGGTCCTTCTGCCTCTGGTTAGCCATCCAACCTTGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp GAAGGACCCAACATGGGGTGGGTGGTCTGCCTGCAGACAGGCTGGTaGCTACAAGAGGTGCAGAAGCAGTCAGCATACAGCGAACACCCA +
Preference number: 1 (lower is better)
Translates to: EGPNMGWVVCLQTGW*LQEVQKQSAYSEHP
Trigger: TGGGTGTTCGCTGTATGCTGACTGCTTCTGCACCTCTTGTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGGGTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp GCTTCCTGTCGGAGCACAGAACTGCTGGGTCCAACAGCTGATGCTTaGAGCTCAGAAGGGGAGGGGCACCAGCGTGAGTACATCACACCA +
Preference number: 1 (lower is better)
Translates to: ASCRSTELLGPTADA*SSEGEGHQREYITP
Trigger: TGGTGTGATGTACTCACGCTGGTGCCCCTCCCCTTCTGAGCTGCAAGCATCAGCTGTTGGACCCAGCAGTTCTGTGCTCCGACAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 90 bp CACAGGACACACCGTGCCGTGACTCACGACAGTATGATGTGCTCCTaGAAGGTAGCTCTGTTCACAGGGGACATGTACCAACAGTGTGGC +
Preference number: 1 (lower is better)
Translates to: HRTHRAVTHDSMMCS*KVALFTGDMYQQCG
Trigger: GCCACACTGTTGGTACATGTCCCCTGTGAACAGAGCTACCTTTCAGGAGCACATCATACTGTCGTGAGTCACGGCACGGTGTGTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR GCA 90 bp TGTGAGCAAAGGGGGTTGCAGCAAATGCTAGAACTGGGATCATCTTaGAGCCCAGTTTCCCACTGCTTCCTGTCGGAGCACAGAACTGCT +
Preference number: 1 (lower is better)
Translates to: CEQRGLQQMLELGSS*SPVSHCFLSEHRTA
Trigger: AGCAGTTCTGTGCTCCGACAGGAAGCAGTGGGAAACTGGGCTGCAAGATGATCCCAGTTCTAGCATTTGCTGCAACCCCCTTTGCTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp AGAGCTCAGCTGAGTGCAACTTTACATATGGGAACCCACACTCCATaGAGTCACCACACTGACCTCTCCACAGACTTCCACACTCCCCAC +
Preference number: 1 (lower is better)
Translates to: RAQLSATLHMGTHTP*SHHTDLSTDFHTPH
Trigger: GTGGGGAGTGTGGAAGTCTGTGGAGAGGTCAGTGTGGTGACTCCATGGAGTGTGGGTTCCCATATGTAAAGTTGCACTCAGCTGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp GAAACTGAGGCAGACACAGGAAGACAATTGACAGCTTTCCTCAGCTaGCTGGTGGCAAGACAGGGATCCAGCCCCGCCAACTCCATATTT +
Preference number: 1 (lower is better)
Translates to: ETEADTGRQLTAFLS*LVARQGSSPANSIF
Trigger: AAATATGGAGTTGGCGGGGCTGGATCCCTGTCTTGCCACCAGCCAGCTGAGGAAAGCTGTCAATTGTCTTCCTGTGTCTGCCTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 90 bp TCCTTTCTAGTTTCTAGGAAACTGAGGCAGACACAGGAAGACAATTaGCAGCTTTCCTCAGCTGGCTGGTGGCAAGACAGGGATCCAGCC +
Preference number: 1 (lower is better)
Translates to: SFLVSRKLRQTQEDN*QLSSAGWWQDRDPA
Trigger: GGCTGGATCCCTGTCTTGCCACCAGCCAGCTGAGGAAAGCTGTCAATTGTCTTCCTGTGTCTGCCTCAGTTTCCTAGAAACTAGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp CCAGAGCTATCCTTCAGACTTCTTAAGCACCATGCTCACTGCATCTaGCGAAATCTGAACCAGGTGCAAGGTAGAGGAGATGAAGGTGGG +
Preference number: 1 (lower is better)
Translates to: PELSFRLLKHHAHCI*RNLNQVQGRGDEGG
Trigger: CCCACCTTCATCTCCTCTACCTTGCACCTGGTTCAGATTTCGGCAGATGCAGTGAGCATGGTGCTTAAGAAGTCTGAAGGATAGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp CAGGTGATAAACCTGGGACACTCTTTATTTAAAGCTGTCCAAGGTTaGATGGCTAACCAGAGGCAGAAGGACCCAACATGGGGTGGGTGG +
Preference number: 1 (lower is better)
Translates to: QVINLGHSLFKAVQG*MANQRQKDPTWGGW
Trigger: CCACCCACCCCATGTTGGGTCCTTCTGCCTCTGGTTAGCCATCCAACCTTGGACAGCTTTAAATAAAGAGTGTCCCAGGTTTATCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp GGGAAGAGGAGAAAAGAGCAGAGCCAAGGGTTCTACATCCAGACTTaGACCAGATCGCTGTGTTGGAGTTATGTATGGGTCTGTTCCCCT +
Preference number: 1 (lower is better)
Translates to: GKRRKEQSQGFYIQT*TRSLCWSYVWVCSP
Trigger: AGGGGAACAGACCCATACATAACTCCAACACAGCGATCTGGTCCAAGTCTGGATGTAGAACCCTTGGCTCTGCTCTTTTCTCCTCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp TACATCAAGTTAGATGAGCACCAGCCAATTAGAAAGGGAGGCGACTaGGACAGCTCTGGGAAGAGGAGAAAAGAGCAGAGCCAAGGGTTC +
Preference number: 1 (lower is better)
Translates to: YIKLDEHQPIRKGGD*DSSGKRRKEQSQGF
Trigger: GAACCCTTGGCTCTGCTCTTTTCTCCTCTTCCCAGAGCTGTCCCAGTCGCCTCCCTTTCTAATTGGCTGGTGCTCATCTAACTTGATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp TTCCATGAAGCTGGAATTCCAGCCTTCTGTGAGCCTCCATATGAGTaGTGGGAACTGAAGCCCTTGAAAGAGTGGCATGTGTTCCTAACT +
Preference number: 1 (lower is better)
Translates to: FHEAGIPAFCEPPYE*WELKPLKEWHVFLT
Trigger: AGTTAGGAACACATGCCACTCTTTCAAGGGCTTCAGTTCCCAGCACTCATATGGAGGCTCACAGAAGGCTGGAATTCCAGCTTCATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp AGGACAGGAACCCGAGCCAGCACCAGCTACATTCTTTCTATGCTCTaGATCTGCTGCATCATCTGCAGTAGTTCACATGCTCTCAACAAT +
Preference number: 1 (lower is better)
Translates to: RTGTRASTSYILSML*ICCIICSSSHALNN
Trigger: ATTGTTGAGAGCATGTGAACTACTGCAGATGATGCAGCAGATGCAGAGCATAGAAAGAATGTAGCTGGTGCTGGCTCGGGTTCCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp CATGAAGCTGGAATTCCAGCCTTCTGTGAGCCTCCATATGAGTGCTaGGAACTGAAGCCCTTGAAAGAGTGGCATGTGTTCCTAACTACT +
Preference number: 1 (lower is better)
Translates to: HEAGIPAFCEPPYEC*ELKPLKEWHVFLTT
Trigger: AGTAGTTAGGAACACATGCCACTCTTTCAAGGGCTTCAGTTCCCAGCACTCATATGGAGGCTCACAGAAGGCTGGAATTCCAGCTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 90 bp CTGCCTCAAAAAGTAAGGTGGAAATCAGTTACCCCCAGGTGGCCTTaGACTCACTGCAGAGCTGAGGATGGCCTTGAAATGTCTAATTCT +
Preference number: 1 (lower is better)
Translates to: LPQKVRWKSVTPRWP*THCRAEDGLEMSNS
Trigger: AGAATTAGACATTTCAAGGCCATCCTCAGCTCTGCAGTGAGTTCAAGGCCACCTGGGGGTAACTGATTTCCACCTTACTTTTTGAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp ACCCGAGCCAGCACCAGCTACATTCTTTCTATGCTCTGCATCTGCTaGATCATCTGCAGTAGTTCACATGCTCTCAACAATTCTTTGTGG +
Preference number: 1 (lower is better)
Translates to: TRASTSYILSMLCIC*IICSSSHALNNSLW
Trigger: CCACAAAGAATTGTTGAGAGCATGTGAACTACTGCAGATGATGCAGCAGATGCAGAGCATAGAAAGAATGTAGCTGGTGCTGGCTCGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp AGTTGCCACACTAGTTGGTTGTCTTCAGCAAGAGCACAAAGACCATaGGAGGTCTTGGAAGACAGAAAGACTTTCTCTGCTCTTTCTGCG +
Preference number: 1 (lower is better)
Translates to: SCHTSWLSSARAQRP*EVLEDRKTFSALSA
Trigger: CGCAGAAAGAGCAGAGAAAGTCTTTCTGTCTTCCAAGACCTCCCATGGTCTTTGTGCTCTTGCTGAAGACAACCAACTAGTGTGGCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp ACCATGCATTTTACATATACAGCACAGCTCATATCATCTCGACACTaGATCTCCATAGGACTGCTGGAAAGTGCTGCTGTGCATCGTGGA +
Preference number: 1 (lower is better)
Translates to: TMHFTYTAQLISSRH*ISIGLLESAAVHRG
Trigger: TCCACGATGCACAGCAGCACTTTCCAGCAGTCCTATGGAGATGCAGTGTCGAGATGATATGAGCTGTGCTGTATATGTAAAATGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp CTAGTTGGTTGTCTTCAGCAAGAGCACAAAGACCATGGGAGGTCTTaGAAGACAGAAAGACTTTCTCTGCTCTTTCTGCGACAGACTGAA +
Preference number: 1 (lower is better)
Translates to: LVGCLQQEHKDHGRS*KTERLSLLFLRQTE
Trigger: TTCAGTCTGTCGCAGAAAGAGCAGAGAAAGTCTTTCTGTCTTCCAAGACCTCCCATGGTCTTTGTGCTCTTGCTGAAGACAACCAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp TCCTCTACTGTCCTCTTGATGGCTTTAATCAGAGAGGTGTTGGGGTaGTCTGGTAGCCACTACTACATTTTGAGGTTGAGGTTAGCAGTA +
Preference number: 1 (lower is better)
Translates to: SSTVLLMALIREVLG*SGSHYYILRLRLAV
Trigger: TACTGCTAACCTCAACCTCAAAATGTAGTAGTGGCTACCAGACCACCCCAACACCTCTCTGATTAAAGCCATCAAGAGGACAGTAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 90 bp AAGCAGCTCAGTAGCTGGGCTACTAGAAGCTCTGACAAAGGAGACTaGGTCACAGCAGAGCTTCAAGTCTATTCTGACACTTTACACATT +
Preference number: 1 (lower is better)
Translates to: KQLSSWATRSSDKGD*VTAELQVYSDTLHI
Trigger: AATGTGTAAAGTGTCAGAATAGACTTGAAGCTCTGCTGTGACTCAGTCTCCTTTGTCAGAGCTTCTAGTAGCCCAGCTACTGAGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR GCA 90 bp TATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCCAGCCTaGTCTGTTGGTTTGGACTGTGGTAAAATTCACCATATCCATTTA +
Preference number: 1 (lower is better)
Translates to: YARQVYCTNSATSPA*SVGLDCGKIHHIHL
Trigger: TAAATGGATATGGTGAATTTTACCACAGTCCAAACCAACAGAGCAGGCTGGGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp TGTAAAAATCAAAACGACTCCTGGCCCAGACAGAAAGTTAACTCGTaGAGGCATAGGACAGAAGCCAATATAGGCATGGTTCCAAATGAC +
Preference number: 1 (lower is better)
Translates to: CKNQNDSWPRQKVNS*RHRTEANIGMVPND
Trigger: GTCATTTGGAACCATGCCTATATTGGCTTCTGTCCTATGCCTGCACGAGTTAACTTTCTGTCTGGGCCAGGAGTCGTTTTGATTTTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp GAGGCCAAGTTGAGCTTAGCTTCTAACACCAGATGCACTAATGACTaGAGCAGGCCAGTCATAAAACAGACCAGGAAAGAAACATATACA +
Preference number: 1 (lower is better)
Translates to: EAKLSLASNTRCTND*SRPVIKQTRKETYT
Trigger: TGTATATGTTTCTTTCCTGGTCTGTTTTATGACTGGCCTGCTCCAGTCATTAGTGCATCTGGTGTTAGAAGCTAAGCTCAACTTGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 90 bp CAGTCACAGCTAAGTAGAAACATTAGGGACTCTCTGGAAATGTCTTaGAGGGAAATAGGCATTCTTCTGTCCTCTACTGTCCTCTTGATG +
Preference number: 1 (lower is better)
Translates to: QSQLSRNIRDSLEMS*REIGILLSSTVLLM
Trigger: CATCAAGAGGACAGTAGAGGACAGAAGAATGCCTATTTCCCTTCAAGACATTTCCAGAGAGTCCCTAATGTTTCTACTTAGCTGTGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 90 bp ACAAACAGAAATATGTTAGATGCCTGTAAAAATCAAAACGACTCCTaGCCCAGACAGAAAGTTAACTCGTGCAGGCATAGGACAGAAGCC +
Preference number: 1 (lower is better)
Translates to: TNRNMLDACKNQNDS*PRQKVNSCRHRTEA
Trigger: GGCTTCTGTCCTATGCCTGCACGAGTTAACTTTCTGTCTGGGCCAGGAGTCGTTTTGATTTTTACAGGCATCTAACATATTTCTGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp GCTTCATCAGTGAACTACAGGCTTAGTGACACTGCTCACCAATTTTaGCTTACAGTAGATAAGAAATGTTGGCATGTCCTTATTCAGCAC +
Preference number: 1 (lower is better)
Translates to: ASSVNYRLSDTAHQF*LTVDKKCWHVLIQH
Trigger: GTGCTGAATAAGGACATGCCAACATTTCTTATCTACTGTAAGGCAAAATTGGTGAGCAGTGTCACTAAGCCTGTAGTTCACTGATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 90 bp TCAGGAAACAATGTGATACAACGTGTAGCCATCAATAAGAGACTGTaGCTGCAGCCTGCTACTTGCTTATGCTTTAATAACAAACCACAG +
Preference number: 1 (lower is better)
Translates to: SGNNVIQRVAINKRL*LQPATCLCFNNKPQ
Trigger: CTGTGGTTTGTTATTAAAGCATAAGCAAGTAGCAGGCTGCAGTCACAGTCTCTTATTGATGGCTACACGTTGTATCACATTGTTTCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR TCA 90 bp GATGGCAGCCATGTGTCACAACTCCCAGCTGTTATCCATGATATATaGATAAGAGATTTTAAGTTCAGTCAGTCACACAAATACTTACTT +
Preference number: 1 (lower is better)
Translates to: DGSHVSQLPAVIHDI*IRDFKFSQSHKYLL
Trigger: AAGTAAGTATTTGTGTGACTGACTGAACTTAAAATCTCTTATTCATATATCATGGATAACAGCTGGGAGTTGTGACACATGGCTGCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 90 bp TGGAGATGTTCTTTCTCTTGTTGTATCTCTCTACACCACGTGATCTaGATCTTAAACAAAACCTACAATCTGAACCATAACTACGAGCAT +
Preference number: 1 (lower is better)
Translates to: WRCSFSCCISLHHVI*ILNKTYNLNHNYEH
Trigger: ATGCTCGTAGTTATGGTTCAGATTGTAGGTTTTGTTTAAGATTCAGATCACGTGGTGTAGAGAGATACAACAAGAGAAAGAACATCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 90 bp GGAAATCAAAGAGAAATAACACATTTATCCAATCCTGATGGTTCTTaGCATAAACAAACGCACAATACTTCTGTAGTAGCCAAGAAGGCT +
Preference number: 1 (lower is better)
Translates to: GNQREITHLSNPDGS*HKQTHNTSVVAKKA
Trigger: AGCCTTCTTGGCTACTACAGAAGTATTGTGCGTTTGTTTATGGCAAGAACCATCAGGATTGGATAAATGTGTTATTTCTCTTTGATTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CCA 90 bp TACGACTTTGTTATTTATTTATTCAGATATGACAAAACACTAGTCTaGGTAAAACACTGGCCTGTCTCATGGCATAACCATGGACTGAGT +
Preference number: 1 (lower is better)
Translates to: YDFVIYLFRYDKTLV*VKHWPVSWHNHGLS
Trigger: ACTCAGTCCATGGTTATGCCATGAGACAGGCCAGTGTTTTACCCAGACTAGTGTTTTGTCATATCTGAATAAATAAATAACAAAGTCGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp CACAGCAGCTGTTCTATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCCAGGAGCCAGGGAGCTaGCCCTCTGAGTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: HSSCSMLGKCTVPTQPHPQEPGS*PSESGQ
Trigger: CTGCCCTGACTCAGAGGGGCAGCTCCCTGGCTCCTG...GGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATAGAACAGCTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp ACAGGATCCAGCCATAACCCCATGTGTCCTGAACATCAAGACTGTGAGGCCAAGCCAACATGGGGTGGGTaGTCTGCCTGCAGACAGGCT +
Preference number: 2 (lower is better)
Translates to: TGSSHNPMCPEHQDCEAKPTWGG*SACRQA
Trigger: AGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGG...CTTGGCCTCACAGTCTTGATGTTCAGGACACATGGGGTTATGGCTGGATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp ACAGGATCCAGCCATAACCCCATGTGTCCTGAACATCAAGACTGTGAGGCCAAGTCCTCAGCTGGCTGGTaGCAAGACAGGGATCCAGCC +
Preference number: 2 (lower is better)
Translates to: TGSSHNPMCPEHQDCEAKSSAGW*QDRDPA
Trigger: GGCTGGATCCCTGTCTTGCCACCAGCCAGCTGAGGA...CTTGGCCTCACAGTCTTGATGTTCAGGACACATGGGGTTATGGCTGGATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp GAGCCAGGCAGAAGGCACGTGCGAGGACAGAGAGGATGCTGGCAGACTTTCATCATCAATAAGAGACTGTaGCTGCAGCCTGCTACTTGC +
Preference number: 2 (lower is better)
Translates to: EPGRRHVRGQRGCWQTFIINKRL*LQPATC
Trigger: GCAAGTAGCAGGCTGCAGTCACAGTCTCTTATTGAT...GATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCTGCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp GAGAGACAGACAGACAGATCCATGGAAGCTAGAGGATGTGTCCAATTCCATGAAAGGGAGCTGCCCCTCTaGGTCAGGGCAGCACCACCT +
Preference number: 2 (lower is better)
Translates to: ERQTDRSMEARGCVQFHERELPL*VRAAPP
Trigger: AGGTGGTGCTGCCCTGACTCAGAGGGGCAGCTCCCT...TTCATGGAATTGGACACATCCTCTAGCTTCCATGGATCTGTCTGTCTGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGGCGTGTGTGTCCATATaGAGGTGTTGGATACCCTGG +
Preference number: 2 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGACVSI*RCWIPW
Trigger: CCAGGGTATCCAACACCTTCATATGGACACACACGC...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp GACCCAGCACTACACAAGAGAATGCTAACATCCACCGGGGGAAGGGGCAGAGGGAACTCCCCCACCCCCTaGCCATTAAATGAAATCCTA +
Preference number: 2 (lower is better)
Translates to: DPALHKRMLTSTGGRGRGNSPTP*PLNEIL
Trigger: TAGGATTTCATTTAATGGGCAGGGGGTGGGGGAGTT...CCCTCTGCCCCTTCCCCCGGTGGATGTTAGCATTCTCTTGTGTAGTGCTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGTTCCGAGTGCCTGGATaGCAGCCATGTGTCACAACT +
Preference number: 2 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGFRVPG*QPCVTT
Trigger: AGTTGTGACACATGGCTGCCATCCAGGCACTCGGAA...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp GGAGCTGCCCCTCTGAGTCAGGGCAGCACCACCTGCACCCCAACAGTGAACAGCAATGCATGTTGGCTGTaGTCACAAACTCTACTTTAT +
Preference number: 2 (lower is better)
Translates to: GAAPLSQGSTTCTPTVNSNACWL*SQTLLY
Trigger: ATAAAGTAGAGTTTGTGACCACAGCCAACATGCATT...GCTGTTCACTGTTGGGGTGCAGGTGGTGCTGCCCTGACTCAGAGGGGCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp AGATCTGGAGTGGTTGCAGAACAACACTGTGACACAGCTTTCTCACTATTGCCTACCCCCAGGTGGCCTTaGACTCACTGCAGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: RSGVVAEQHCDTAFSLLPTPRWP*THCRAE
Trigger: CTCAGCTCTGCAGTGAGTTCAAGGCCACCTGGGGGT...AGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp GTGAGTTCTAGCACAGCCAGGGATAGATACACAGAGAAACCTTGTCTCAAAAACGGTGGGTGGTCTGCCTaGAGACAGGCTGGTGCCTAC +
Preference number: 2 (lower is better)
Translates to: VSSSTARDRYTEKPCLKNGGWSA*RQAGAY
Trigger: GTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACC...GTTTTTGAGACAAGGTTTCTCTGTGTATCTATCCCTGGCTGTGCTAGAACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp ACAGGATCCAGCCATAACCCCATGTGTCCTGAACATCAAGACTGTGAGGCCAAGGGCTGCTGGAGTTTGTaGGCCACTGTAGCTTCATCA +
Preference number: 2 (lower is better)
Translates to: TGSSHNPMCPEHQDCEAKGCWSL*ATVASS
Trigger: TGATGAAGCTACAGTGGCCCACAAACTCCAGCAGCC...CTTGGCCTCACAGTCTTGATGTTCAGGACACATGGGGTTATGGCTGGATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp TGGGAAGAGGAGAAAAGAGCAGAGCCAAGGGTTCTACATCCAGACTaGGACCAGATCGCTGTGTTGGAGTTATGTATGGGTCTGTTCCCC +
Preference number: 2 (lower is better)
Translates to: WEEEKRAEPRVLHPD*DQIAVLELCMGLFP
Trigger: GGGGAACAGACCCATACATAACTCCAACACAGCGATCTGGTCCAAGTCTGGATGTAGAACCCTTGGCTCTGCTCTTTTCTCCTCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp TCTGTAGTAGCCAAGAAGGCTCACCCTCAGGAGCCAGGGAGCTGCCCCTCTGAGCCTGCTACTTGCTTATaGTTTAATAACAAACCACAG +
Preference number: 2 (lower is better)
Translates to: SVVAKKAHPQEPGSCPSEPATCL*FNNKPQ
Trigger: CTGTGGTTTGTTATTAAAGCATAAGCAAGTAGCAGG...CTCAGAGGGGCAGCTCCCTGGCTCCTGAGGGTGAGCCTTCTTGGCTACTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR-3UTR GCA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGTTTCTCTGCTCTTTCTaGGACAGACTGAAGAGACAG +
Preference number: 2 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGFLCSF*DRLKRQ
Trigger: CTGTCTCTTCAGTCTGTCGCAGAAAGAGCAGAGAAA...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp TTGGACCAGATCGCTGTGTTGGAGTTATGTATGGGTCTGTTCCCCTaGTTTCAATGTTTAGAGACAGAGAAGGGGCCGACCCAGCACTAC +
Preference number: 2 (lower is better)
Translates to: LDQIAVLELCMGLFP*FQCLETEKGPTQHY
Trigger: GTAGTGCTGGGTCGGCCCCTTCTCTGTCTCTAAACATTGAAACAAGGGGAACAGACCCATACATAACTCCAACACAGCGATCTGGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp GACCCAGCACTACACAAGAGAATGCTAACATCCACCGGGGGAAGGGGCAGAGGGATGATATTTAAAGAGTaGGTGAGAGAGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: DPALHKRMLTSTGGRGRGMIFKE*VRERER
Trigger: TCTCTCTCTCTCTCTCACTCACTCTTTAAATATCAT...CCCTCTGCCCCTTCCCCCGGTGGATGTTAGCATTCTCTTGTGTAGTGCTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp GTGAGTTCTAGCACAGCCAGGGATAGATACACAGAGAAACCTTGTCTCAAAAACAGTCCTCGGGGGACTTaGGACTCACTTTGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: VSSSTARDRYTEKPCLKNSPRGT*DSLWSP
Trigger: GGGACTCCAAAGTGAGTCTCAAGTCCCCCGAGGACT...GTTTTTGAGACAAGGTTTCTCTGTGTATCTATCCCTGGCTGTGCTAGAACTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp GAGCCAGGCAGAAGGCACGTGCGAGGACAGAGAGGATGCTGGCAGACTTTCATCCTGCAGCCTGCTACTTaGTTATGCTTTAATAACAAA +
Preference number: 2 (lower is better)
Translates to: EPGRRHVRGQRGCWQTFILQPAT*LCFNNK
Trigger: TTTGTTATTAAAGCATAAGCAAGTAGCAGGCTGCAG...GATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCTGCCTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR-3UTR GCA 90 bp AGAAGGCACGTGCGAGGACAGAGAGGATGCTGGCAGACTTTCATCGCCTTAGAGATAAGAGACTGTGACTaGAGCCTGCTACTTGCTTAT +
Preference number: 2 (lower is better)
Translates to: RRHVRGQRGCWQTFIALEIRDCD*SLLLAY
Trigger: ATAAGCAAGTAGCAGGCTGCAGTCACAGTCTCTTAT...CTCTAAGGCGATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR-3UTR CCA 90 bp GACCCAGCACTACACAAGAGAATGCTAACATCCACCGGGGGAAGGGGCAGAGGGTGCCAAGTAGTCAAATaGAAGATAACCAATATAGCG +
Preference number: 2 (lower is better)
Translates to: DPALHKRMLTSTGGRGRGCQVVK*KITNIA
Trigger: CGCTATATTGGTTATCTTCCATTTGACTACTTGGCA...CCCTCTGCCCCTTCCCCCGGTGGATGTTAGCATTCTCTTGTGTAGTGCTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp AGTTGGTTGTCTTCAGCAAGAGCACAAAGACCATGGGAGGTCTTGGAAGACAGAGATTTTCCGAGTGCCTaGATGGCAGCCATGTGTCAC +
Preference number: 2 (lower is better)
Translates to: SWLSSARAQRPWEVLEDRDFPSA*MAAMCH
Trigger: GTGACACATGGCTGCCATCCAGGCACTCGGAAAATC...TCTGTCTTCCAAGACCTCCCATGGTCTTTGTGCTCTTGCTGAAGACAACCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp AGAAGGCACGTGCGAGGACAGAGAGGATGCTGGCAGACTTTCATCGCCTTAGAGTCTTTCTGGATCTGGTaGATCATAGAACTCTATGAG +
Preference number: 2 (lower is better)
Translates to: RRHVRGQRGCWQTFIALESFWIW*IIELYE
Trigger: CTCATAGAGTTCTATGATTCACCAGATCCAGAAAGA...CTCTAAGGCGATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR-3UTR TCA 90 bp GTGCAAGGTAGAGGAGATGAAGGTGGGTGTGTTCATGGGACAGTGGAAGTCACTATGTGTCCAATTCCATaGAGCTGGAATTCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: VQGRGDEGGCVHGTVEVTMCPIP*SWNSSL
Trigger: AAGGCTGGAATTCCAGCTTCATGGAATTGGACACAT...AGTGACTTCCACTGTCCCATGAACACACCCACCTTCATCTCCTCTACCTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp ACATGTACCAACAGTGTGGCTCCATGGAAATCAAAGAGAAATAACACATTTATCCAGGAGCCAGGGAGCTaGCCCTCTGAGTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: TCTNSVAPWKSKRNNTFIQEPGS*PSESGQ
Trigger: CTGCCCTGACTCAGAGGGGCAGCTCCCTGGCTCCTG...GATAAATGTGTTATTTCTCTTTGATTTCCATGGAGCCACACTGTTGGTACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp GTACTAACAAAGCAGCTCAGTAGCTGGGCTACTAGAAGCTCTGACAAAGGAGACATCAATAAGAGACTGTaGCTGCAGCCTGCTACTTGC +
Preference number: 2 (lower is better)
Translates to: VLTKQLSSWATRSSDKGDINKRL*LQPATC
Trigger: GCAAGTAGCAGGCTGCAGTCACAGTCTCTTATTGAT...GTCTCCTTTGTCAGAGCTTCTAGTAGCCCAGCTACTGAGCTGCTTTGTTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp CAACATAGAAACACGGCAAATCACACGTTAGAAAGCCTCTTCTCACAGGACACAAGCAACCCCAGCACCTaGAAAGCCACATGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: QHRNTANHTLESLFSQDTSNPST*KATCVC
Trigger: GCAAACACATGTGGCTTTTCAGGTGCTGGGGTTGCT...TGTGTCCTGTGAGAAGAGGCTTTCTAACGTGTGATTTGCCGTGTTTCTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp CACAGCAGCTGTTCTATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCTCTTGTTTGTGTGGGTaGTGTGAAGAAGATCTTGGT +
Preference number: 2 (lower is better)
Translates to: HSSCSMLGKCTVPTQPHPSCLCG*CEEDLG
Trigger: ACCAAGATCTTCTTCACACCACCCACACAAACAAGA...GGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATAGAACAGCTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp ACTAGTAGGCAATCACGCTTAAATCACAACATAGAAACACGGCAAATCACACGTCGAGGACAGAGAGGATaGTGGCAGACTTTCATCGCC +
Preference number: 2 (lower is better)
Translates to: TSRQSRLNHNIETRQITRRGQRG*WQTFIA
Trigger: GGCGATGAAAGTCTGCCAGCATCCTCTCTGTCCTCG...ACGTGTGATTTGCCGTGTTTCTATGTTGTGATTTAAGCGTGATTGCCTACTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp ACCAACAGTGTGGCTCCATGGAAATCAAAGAGAAATAACACATTTATCCAATCCCAGGCAGAAGGCACGTaGGAGGACAGAGAGGATGCT +
Preference number: 2 (lower is better)
Translates to: TNSVAPWKSKRNNTFIQSQAEGT*EDREDA
Trigger: AGCATCCTCTCTGTCCTCGCACGTGCCTTCTGCCTG...GGATTGGATAAATGTGTTATTTCTCTTTGATTTCCATGGAGCCACACTGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp TACACTCTAGATCGAACGCAGTGCCAAAGCAAATGGAGCCAGGCAGAAGGCACGTGCCAAGTAGTCAAATaGAAGATAACCAATATAGCG +
Preference number: 2 (lower is better)
Translates to: YTLDRTQCQSKWSQAEGTCQVVK*KITNIA
Trigger: CGCTATATTGGTTATCTTCCATTTGACTACTTGGCA...CGTGCCTTCTGCCTGGCTCCATTTGCTTTGGCACTGCGTTCGATCTAGAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp AAACACTGGCCTGTCTCATGGCATAACCATGGACTGAGTATATGCTCTGATACCAGTGAACAGCACCACTaGAGGACACAAAACCACAGA +
Preference number: 2 (lower is better)
Translates to: KHWPVSWHNHGLSICSDTSEQHH*RTQNHR
Trigger: TCTGTGGTTTTGTGTCCTCCAGTGGTGCTGTTCACT...GGTATCAGAGCATATACTCAGTCCATGGTTATGCCATGAGACAGGCCAGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp GAGAGACAGACAGACAGATCCATGGAAGCTAGAGGATGTGTCCAATTCCATGAACCTCCATATGAGTGCTaGGAACTGAAGCCCTTGAAA +
Preference number: 2 (lower is better)
Translates to: ERQTDRSMEARGCVQFHEPPYEC*ELKPLK
Trigger: TTTCAAGGGCTTCAGTTCCCAGCACTCATATGGAGG...TTCATGGAATTGGACACATCCTCTAGCTTCCATGGATCTGTCTGTCTGTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp GTGTACTGTACCAACTCAGCCACATCCCCAGCCTGCTCTGTTGGTTaGGACTGTGGTAAAATTCACCATATCCATTTAGTAATCTTCAGC +
Preference number: 2 (lower is better)
Translates to: VYCTNSATSPACSVG*DCGKIHHIHLVIFS
Trigger: GCTGAAGATTACTAAATGGATATGGTGAATTTTACCACAGTCCAAACCAACAGAGCAGGCTGGGGATGTGGCTGAGTTGGTACAGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp GACAATGCACTCCATAGACATTGGGAGGGAATAGATCTGGAGTGGTaGCAGAACAACACTGTGACACAGCTTTCTCACTATTGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: DNALHRHWEGIDLEW*QNNTVTQLSHYCLF
Trigger: AAACAGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCTATTCCCTCCCAATGTCTATGGAGTGCATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp CTCAAGGATGAAATAAAATGTGGAAACAGATGTGAGCAAAGGGGGTaGCAGCAAATGCTAGAACTGGGATCATCTTGCAGCCCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: LKDEIKCGNRCEQRG*QQMLELGSSCSPVS
Trigger: GGAAACTGGGCTGCAAGATGATCCCAGTTCTAGCATTTGCTGCAACCCCCTTTGCTCACATCTGTTTCCACATTTTATTTCATCCTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp CACAGCAGCTGTTCTATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCGACCTTATTGTCTTGTaGGACATTTCTGTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: HSSCSMLGKCTVPTQPHPDLIVL*DISVLS
Trigger: TGAAAGAACAGAAATGTCTCACAAGACAATAAGGTC...GGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATAGAACAGCTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp ACATGTACCAACAGTGTGGCTCCATGGAAATCAAAGAGAAATAACACATTTATCCAGGCAGAAGGCACGTaGGAGGACAGAGAGGATGCT +
Preference number: 2 (lower is better)
Translates to: TCTNSVAPWKSKRNNTFIQAEGT*EDREDA
Trigger: AGCATCCTCTCTGTCCTCGCACGTGCCTTCTGCCTG...GATAAATGTGTTATTTCTCTTTGATTTCCATGGAGCCACACTGTTGGTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp CACAGCAGCTGTTCTATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCGTCCAACTTTTGGATTaGTTCACAATTTGGGGTATT +
Preference number: 2 (lower is better)
Translates to: HSSCSMLGKCTVPTQPHPVQLLD*FTIWGI
Trigger: AATACCCCAAATTGTGAAGCAATCCAAAAGTTGGAC...GGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATAGAACAGCTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp CACAGCAGCTGTTCTATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCTTTATATTCAGAAGATaGTGTGAACACTGCCACTGT +
Preference number: 2 (lower is better)
Translates to: HSSCSMLGKCTVPTQPHPFIFRR*CEHCHC
Trigger: ACAGTGGCAGTGTTCACACCATCTTCTGAATATAAA...GGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATAGAACAGCTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp TCACAACATAGAAACACGGCAAATCACACGTTAGAAAGCCTCTTCTCACAGGACAGTATGATGTGCTCCTaGAAGGTAGCTCTGTTCACA +
Preference number: 2 (lower is better)
Translates to: SQHRNTANHTLESLFSQDSMMCS*KVALFT
Trigger: TGTGAACAGAGCTACCTTTCAGGAGCACATCATACT...GTCCTGTGAGAAGAGGCTTTCTAACGTGTGATTTGCCGTGTTTCTATGTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp GTGCAAGGTAGAGGAGATGAAGGTGGGTGTGTTCATGGGACAGTGGAAGTCACTGTAGAATCGGGGGTATaGAAATCAAGCATTTTAATA +
Preference number: 2 (lower is better)
Translates to: VQGRGDEGGCVHGTVEVTVESGV*KSSILI
Trigger: TATTAAAATGCTTGATTTGCATACCCCCGATTCTAC...AGTGACTTCCACTGTCCCATGAACACACCCACCTTCATCTCCTCTACCTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp CACAGCAGCTGTTCTATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCTTCTCCAGCGTAACTTaGATGATCTCATTTCTATTA +
Preference number: 2 (lower is better)
Translates to: HSSCSMLGKCTVPTQPHPFSSVT*MISFLL
Trigger: TAATAGAAATGAGATCATCCAAGTTACGCTGGAGAA...GGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATAGAACAGCTGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp AGATCTGGAGTGGTTGCAGAACAACACTGTGACACAGCTTTCTCACTATTGCCTGAAAGAAAGGGTGGTTaGAAAGATTGGGTACTAGGT +
Preference number: 2 (lower is better)
Translates to: RSGVVAEQHCDTAFSLLPERKGG*KDWVLG
Trigger: ACCTAGTACCCAATCTTTCCAACCACCCTTTCTTTC...AGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp TTTATTGAGGATGTCAAAGCTGAAGATTTCACTTGTCAGCTTCCCTaGCAGCTAAATGAAGCCTGTACTAAGTTCCAGGCAGTCACAGCT +
Preference number: 2 (lower is better)
Translates to: FIEDVKAEDFTCQLP*QLNEACTKFQAVTA
Trigger: AGCTGTGACTGCCTGGAACTTAGTACAGGCTTCATTTAGCTGCAAGGGAAGCTGACAAGTGAAATCTTCAGCTTTGACATCCTCAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp AGTTGGTTGTCTTCAGCAAGAGCACAAAGACCATGGGAGGTCTTGGAAGACAGAAATCCTGATGGTTCTTaGCATAAACAAACGCACAAT +
Preference number: 2 (lower is better)
Translates to: SWLSSARAQRPWEVLEDRNPDGS*HKQTHN
Trigger: ATTGTGCGTTTGTTTATGGCAAGAACCATCAGGATT...TCTGTCTTCCAAGACCTCCCATGGTCTTTGTGCTCTTGCTGAAGACAACCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp GTACTAACAAAGCAGCTCAGTAGCTGGGCTACTAGAAGCTCTGACAAAGGAGACAAATCAAATGCATGTTaGCTGTGGTCACAAACTCTA +
Preference number: 2 (lower is better)
Translates to: VLTKQLSSWATRSSDKGDKSNAC*LWSQTL
Trigger: TAGAGTTTGTGACCACAGCCAACATGCATTTGATTT...GTCTCCTTTGTCAGAGCTTCTAGTAGCCCAGCTACTGAGCTGCTTTGTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 90 bp GCCACTGTTCTCAGAATAGTTTCATCCCTCAGACCTTCAATTTTATaGAGGATGTCAAAGCTGAAGATTTCACTTGTCAGCTTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: ATVLRIVSSLRPSIL*RMSKLKISLVSFPC
Trigger: GCAAGGGAAGCTGACAAGTGAAATCTTCAGCTTTGACATCCTCAATAAAATTGAAGGTCTGAGGGATGAAACTATTCTGAGAACAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp ATCAGCATGACAGCAGTCAAACTCCCCAAGATCAACACTGAAGGTAAAGTCTTCACACTTAGTCTGGAATaGACACTTTTCCCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: ISMTAVKLPKINTEGKVFTLSLE*TLFPGN
Trigger: ATTTCCTGGGAAAAGTGTTCATTCCAGACTAAGTGT...GAAGACTTTACCTTCAGTGTTGATCTTGGGGAGTTTGACTGCTGTCATGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR-3UTR TCA 90 bp AGATCTGGAGTGGTTGCAGAACAACACTGTGACACAGCTTTCTCACTATTGCCTAGGCATGGTTCCAAATaGCAAGGAACAATGTTTAAT +
Preference number: 2 (lower is better)
Translates to: RSGVVAEQHCDTAFSLLPRHGSK*QGTMFN
Trigger: ATTAAACATTGTTCCTTGTCATTTGGAACCATGCCT...AGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp TCACAACATAGAAACACGGCAAATCACACGTTAGAAAGCCTCTTCTCACAGGACTCTTCACACTTAGTCTaGAATGAACACTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SQHRNTANHTLESLFSQDSSHLV*NEHFSQ
Trigger: CTGGGAAAAGTGTTCATTCCAGACTAAGTGTGAAGA...GTCCTGTGAGAAGAGGCTTTCTAACGTGTGATTTGCCGTGTTTCTATGTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR-3UTR CCA 90 bp GTACTAACAAAGCAGCTCAGTAGCTGGGCTACTAGAAGCTCTGACAAAGGAGACTTCTCACCTTTTTCTTaGAACATCTTAACGCATCAT +
Preference number: 2 (lower is better)
Translates to: VLTKQLSSWATRSSDKGDFSPFS*NILTHH
Trigger: ATGATGCGTTAAGATGTTCCAAGAAAAAGGTGAGAA...GTCTCCTTTGTCAGAGCTTCTAGTAGCCCAGCTACTGAGCTGCTTTGTTAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp GTGAGTTCTAGCACAGCCAGGGATAGATACACAGAGAAACCTTGTCTCAAAAACGCTCTATGTTGCTTCTaGAAAATAAACCACCTGTTC +
Preference number: 2 (lower is better)
Translates to: VSSSTARDRYTEKPCLKNALCCF*KINHLF
Trigger: GAACAGGTGGTTTATTTTCCAGAAGCAACATAGAGC...GTTTTTGAGACAAGGTTTCTCTGTGTATCTATCCCTGGCTGTGCTAGAACTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp TATTATAGAGAGAAAAGATATCAAACTAGTTGCCACACTAGTTGGTaGTCTTCAGCAAGAGCACAAAGACCATGGGAGGTCTTGGAAGAC +
Preference number: 2 (lower is better)
Translates to: YYREKRYQTSCHTSW*SSARAQRPWEVLED
Trigger: GTCTTCCAAGACCTCCCATGGTCTTTGTGCTCTTGCTGAAGACAACCAACTAGTGTGGCAACTAGTTTGATATCTTTTCTCTCTATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR GCA 90 bp CAACATAGAAACACGGCAAATCACACGTTAGAAAGCCTCTTCTCACAGGACACAAATCCTGATGGTTCTTaGCATAAACAAACGCACAAT +
Preference number: 2 (lower is better)
Translates to: QHRNTANHTLESLFSQDTNPDGS*HKQTHN
Trigger: ATTGTGCGTTTGTTTATGGCAAGAACCATCAGGATT...TGTGTCCTGTGAGAAGAGGCTTTCTAACGTGTGATTTGCCGTGTTTCTATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp ATCGCCTTAGAGCTCTGTTCATGTCTATTCCGATATGAAGATAACGGGTCCCTTAAATCAAATGCATGTTaGCTGTGGTCACAAACTCTA +
Preference number: 2 (lower is better)
Translates to: IALELCSCLFRYEDNGSLKSNAC*LWSQTL
Trigger: TAGAGTTTGTGACCACAGCCAACATGCATTTGATTT...AAGGGACCCGTTATCTTCATATCGGAATAGACATGAACAGAGCTCTAAGGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 90 bp GGGAATACAGAGACACAGACACACACCCCAGTTCTCCAGCGTAACTaGGATGATCTCATTTCTATTATAGAGAGAAAAGATATCAAACTA +
Preference number: 2 (lower is better)
Translates to: GNTETQTHTPVLQRN*DDLISIIERKDIKL
Trigger: TAGTTTGATATCTTTTCTCTCTATAATAGAAATGAGATCATCCAAGTTACGCTGGAGAACTGGGGTGTGTGTCTGTGTCTCTGTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 90 bp TCTGGAGTGGTTGCAGAACAACACTGTGACACAGCTTTCTCACTATaGCCTGTTTTTCTACTAAGATTAAACTTCAAGAACTGTCATTCT +
Preference number: 2 (lower is better)
Translates to: SGVVAEQHCDTAFSL*PVFLLRLNFKNCHS
Trigger: AGAATGACAGTTCTTGAAGTTTAATCTTAGTAGAAAAACAGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR TCA 90 bp GCAACTAGGTTATTATCCAAGGTATATTATATGAAAGTGAGATCTCTGGCCTCTTATTTAAAGAGTGAGTaGGAGAGAGAGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: ATRLLSKVYYMKVRSLASYLKSE*ERERER
Trigger: TCTCTCTCTCTCTCTCTCTCACTCACTCTTTAAATA...AGAGGCCAGAGATCTCACTTTCATATAATATACCTTGGATAATAACCTAGTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CCA 90 bp TCACAGCAGAGCTTCAAGTCTATTCTGACACTTTACACATTATTCTCTGTAGAAAATGCATGTTGGCTGTaGTCACAAACTCTACTTTAT +
Preference number: 2 (lower is better)
Translates to: SQQSFKSILTLYTLFSVENACWL*SQTLLY
Trigger: ATAAAGTAGAGTTTGTGACCACAGCCAACATGCATT...TTCTACAGAGAATAATGTGTAAAGTGTCAGAATAGACTTGAAGCTCTGCTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR GCA 72 bp CCAGAGGCAGAAGGACCCAACATGGGGTGGGTGGTCTaGCTGCAGACAGGCTGGTGCCTACAAGAGGTGCAG +
Preference number: 3 (lower is better)
Translates to: PEAEGPNMGWVV*LQTGWCLQEVQ
Trigger: CTGCACCTCTTGTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGGGTCCTTCTGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GGTTGGATGGCTAACCAGAGGCAGAAGGACCCAACATaGGGTGGGTGGTCTGCCTGCAGACAGGCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: GWMANQRQKDPT*GGWSACRQAGA
Trigger: GGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGGGTCCTTCTGCCTCTGGTTAGCCATCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp TTCCTGTCGGAGCACAGAACTGCTGGGTCCAACAGCTaGTGCTTGCAGCTCAGAAGGGGAGGGGCACCAGCG +
Preference number: 3 (lower is better)
Translates to: FLSEHRTAGSNS*CLQLRRGGAPA
Trigger: CGCTGGTGCCCCTCCCCTTCTGAGCTGCAAGCATCAGCTGTTGGACCCAGCAGTTCTGTGCTCCGACAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GCTAACCAGAGGCAGAAGGACCCAACATGGGGTGGGTaGTCTGCCTGCAGACAGGCTGGTGCCTACAAGAGG +
Preference number: 3 (lower is better)
Translates to: ANQRQKDPTWGG*SACRQAGAYKR
Trigger: CCTCTTGTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGGGTCCTTCTGCCTCTGGTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp CCCAACATGGGGTGGGTGGTCTGCCTGCAGACAGGCTaGTGCCTACAAGAGGTGCAGAAGCAGTCAGCATAC +
Preference number: 3 (lower is better)
Translates to: PNMGWVVCLQTG*CLQEVQKQSAY
Trigger: GTATGCTGACTGCTTCTGCACCTCTTGTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp GAGCCAGGCAGAAGGCACGTGCGAGGACAGAGAGGATaGTGGCAGACTTTCATCGCCTTAGAGCTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: EPGRRHVRGQRG*WQTFIALELCS
Trigger: TGAACAGAGCTCTAAGGCGATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCTGCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CCA 72 bp AGTTTCCCACTGCTTCCTGTCGGAGCACAGAACTGCTaGGTCCAACAGCTGATGCTTGCAGCTCAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: SFPLLPVGAQNC*VQQLMLAAQKG
Trigger: CCCCTTCTGAGCTGCAAGCATCAGCTGTTGGACCCAGCAGTTCTGTGCTCCGACAGGAAGCAGTGGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp CTCCATAGGACTGCTGGAAAGTGCTGCTGTGCATCGTaGAGCGGCTTAGGGTCTCAGGAAAGCAGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: LHRTAGKCCCAS*SGLGSQESSRE
Trigger: CTCCCTACTGCTTTCCTGAGACCCTAAGCCGCTCCACGATGCACAGCAGCACTTTCCAGCAGTCCTATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp CCAGGGAGCTGCCCCTCTGAGTCAGGGCAGCACCACCTGCACCCCAACAGTGAACAAATCAAATGCATGTaGGCTGTGGTCACAAACTCT +
Preference number: 3 (lower is better)
Translates to: PGSCPSESGQHHLHPNSEQIKCM*AVVTNS
Trigger: AGAGTTTGTGACCACAGCCAACATGCATTTGATTTG...TTCACTGTTGGGGTGCAGGTGGTGCTGCCCTGACTCAGAGGGGCAGCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR TCA 72 bp ACTGCCCTGTGGATGCTGGGAATGGAACCCATTCTCTaGAAATGCAAACTGCTAACTCCCCCACCCCCTGCC +
Preference number: 3 (lower is better)
Translates to: TALWMLGMEPIL*KCKLLTPPPPA
Trigger: GGCAGGGGGTGGGGGAGTTAGCAGTTTGCATTTTCAGAGAATGGGTTCCATTCCCAGCATCCACAGGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp ACCACAGGCAGCCAAGGAGGGTTCCATACAACCAGGTaGCCATGTACAGTTTCCTTCCGGACTCCGTCATCA +
Preference number: 3 (lower is better)
Translates to: TTGSQGGFHTTR*PCTVSFRTPSS
Trigger: TGATGACGGAGTCCGGAAGGAAACTGTACATGGGCACCTGGTTGTATGGAACCCTCCTTGGCTGCCTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR GCA 72 bp TCACAACAGCCTGACACTCTAGAGCCGGGGATCTTATaGCCCCTTCTGGCCTGTATGGGTGTTGCACTCATG +
Preference number: 3 (lower is better)
Translates to: SQQPDTLEPGIL*PLLACMGVALM
Trigger: CATGAGTGCAACACCCATACAGGCCAGAAGGGGGCATAAGATCCCCGGCTCTAGAGTGTCAGGCTGTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp AGGGGGTTGCAGCAAATGCTAGAACTGGGATCATCTTaGAGCCCAGTTTCCCACTGCTTCCTGTCGGAGCAC +
Preference number: 3 (lower is better)
Translates to: RGLQQMLELGSS*SPVSHCFLSEH
Trigger: GTGCTCCGACAGGAAGCAGTGGGAAACTGGGCTGCAAGATGATCCCAGTTCTAGCATTTGCTGCAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp ATCTCGACACTGCATCTCCATAGGACTGCTGGAAAGTaGTGCTGTGCATCGTGGAGCGGCTTAGGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: ISTLHLHRTAGK*CCASWSGLGSQ
Trigger: CTGAGACCCTAAGCCGCTCCACGATGCACAGCAGCACTTTCCAGCAGTCCTATGGAGATGCAGTGTCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp CACAGCAGCTGTTCTATGCTAGGCAAGTGTACTGTACCAACTCAGCCACATCCCGAGTCCTCGGGGGACTaGAGACTCACTTTGGAGTCC +
Preference number: 3 (lower is better)
Translates to: HSSCSMLGKCTVPTQPHPESSGD*RLTLES
Trigger: GGACTCCAAAGTGAGTCTCAAGTCCCCCGAGGACTC...GGGATGTGGCTGAGTTGGTACAGTACACTTGCCTAGCATAGAACAGCTGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp GTTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTaGCACTCTAGAGCCGGGGATCTTATGCCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: VPNTYSRQFTTA*HSRAGDLMPPS
Trigger: AGAAGGGGGCATAAGATCCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp CACCGTGCCGTGACTCACGACAGTATGATGTGCTCCTaGAAGGTAGCTCTGTTCACAGGGGACATGTACCAA +
Preference number: 3 (lower is better)
Translates to: HRAVTHDSMMCS*KVALFTGDMYQ
Trigger: TTGGTACATGTCCCCTGTGAACAGAGCTACCTTTCAGGAGCACATCATACTGTCGTGAGTCACGGCACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR GCA 72 bp GCTGGAATTCCAGCCTTCTGTGAGCCTCCATATGAGTaGTGGGAACTGAAGCCCTTGAAAGAGTGGCATGTG +
Preference number: 3 (lower is better)
Translates to: AGIPAFCEPPYE*WELKPLKEWHV
Trigger: CACATGCCACTCTTTCAAGGGCTTCAGTTCCCAGCACTCATATGGAGGCTCACAGAAGGCTGGAATTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GCATGTCCACTGTCATTGTCAGTCCTTAAGGAATTATaGCAGGAGGAGCATGAGTTCAAGGCTGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: ACPLSLSVLKEL*QEEHEFKAGPG
Trigger: GCCTGGGCCAGCCTTGAACTCATGCTCCTCCTGCCATAATTCCTTAAGGACTGACAATGACAGTGGACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp TTAGATGAGCACCAGCCAATTAGAAAGGGAGGCGACTaGGACAGCTCTGGGAAGAGGAGAAAAGAGCAGAGC +
Preference number: 3 (lower is better)
Translates to: LDEHQPIRKGGD*DSSGKRRKEQS
Trigger: GCTCTGCTCTTTTCTCCTCTTCCCAGAGCTGTCCCAGTCGCCTCCCTTTCTAATTGGCTGGTGCTCATCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp GAGCCAGGCAGAAGGCACGTGCGAGGACAGAGAGGATGCTGGCAGACTTTCATCAAAAGCCACATGTGTTaGCCCCAAATCAAATGCATG +
Preference number: 3 (lower is better)
Translates to: EPGRRHVRGQRGCWQTFIKSHMC*PQIKCM
Trigger: CATGCATTTGATTTGGGGCAAACACATGTGGCTTTT...GATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCTGCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGTGCCACACTAGTTGGTaGTCTTCAGCAAGAGCACAA +
Preference number: 3 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGCHTSW*SSARAQ
Trigger: TTGTGCTCTTGCTGAAGACAACCAACTAGTGTGGCA...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp GACCCAGCACTACACAAGAGAATGCTAACATCCACCGGGGGAAGGGGCAGAGGGAGCCACTACTACATTTaGAGGTTGAGGTTAGCAGTA +
Preference number: 3 (lower is better)
Translates to: DPALHKRMLTSTGGRGRGSHYYI*RLRLAV
Trigger: TACTGCTAACCTCAACCTCAAAATGTAGTAGTGGCT...CCCTCTGCCCCTTCCCCCGGTGGATGTTAGCATTCTCTTGTGTAGTGCTGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GGAATTCCAGCCTTCTGTGAGCCTCCATATGAGTGCTaGGAACTGAAGCCCTTGAAAGAGTGGCATGTGTTC +
Preference number: 3 (lower is better)
Translates to: GIPAFCEPPYEC*ELKPLKEWHVF
Trigger: GAACACATGCCACTCTTTCAAGGGCTTCAGTTCCCAGCACTCATATGGAGGCTCACAGAAGGCTGGAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp CCCCACTGTCTCCTTGAGAAACAGGAAAGGACCAGATaGCATCCCATCCCTAGACTTTATCCAAACCCCATC +
Preference number: 3 (lower is better)
Translates to: PHCLLEKQERTR*HPIPRLYPNPI
Trigger: GATGGGGTTTGGATAAAGTCTAGGGATGGGATGCCATCTGGTCCTTTCCTGTTTCTCAAGGAGACAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp CTGAGTGCAACTTTACATATGGGAACCCACACTCCATaGAGTCACCACACTGACCTCTCCACAGACTTCCAC +
Preference number: 3 (lower is better)
Translates to: LSATLHMGTHTP*SHHTDLSTDFH
Trigger: GTGGAAGTCTGTGGAGAGGTCAGTGTGGTGACTCCATGGAGTGTGGGTTCCCATATGTAAAGTTGCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp AGAAGGCACGTGCGAGGACAGAGAGGATGCTGGCAGACTTTCATCGCCTTAGAGAAAAGCCACATGTGTTaGCCCCAAATCAAATGCATG +
Preference number: 3 (lower is better)
Translates to: RRHVRGQRGCWQTFIALEKSHMC*PQIKCM
Trigger: CATGCATTTGATTTGGGGCAAACACATGTGGCTTTT...CTCTAAGGCGATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGTTTAATGTCATAGGGTaGGAAAGAAAGGGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGFNVIG*ERKGGW
Trigger: CCAACCACCCTTTCTTTCCAACCCTATGACATTAAA...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp CCATGTACAGTTTCCTTCCGGACTCCGTCATCAGCATaGCAGCAGTCAAACTCCCCAAGATCAACACTGAAG +
Preference number: 3 (lower is better)
Translates to: PCTVSFRTPSSA*QQSNSPRSTLK
Trigger: CTTCAGTGTTGATCTTGGGGAGTTTGACTGCTGTCATGCTGATGACGGAGTCCGGAAGGAAACTGTACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR TCA 72 bp AAAGTAAGGTGGAAATCAGTTACCCCCAGGTGGCCTTaGACTCACTGCAGAGCTGAGGATGGCCTTGAAATG +
Preference number: 3 (lower is better)
Translates to: KVRWKSVTPRWP*THCRAEDGLEM
Trigger: CATTTCAAGGCCATCCTCAGCTCTGCAGTGAGTTCAAGGCCACCTGGGGGTAACTGATTTCCACCTTACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp TTCTTAAGCACCATGCTCACTGCATCTGCCGAAATCTaGACCAGGTGCAAGGTAGAGGAGATGAAGGTGGGT +
Preference number: 3 (lower is better)
Translates to: FLSTMLTASAEI*TRCKVEEMKVG
Trigger: ACCCACCTTCATCTCCTCTACCTTGCACCTGGTTCAGATTTCGGCAGATGCAGTGAGCATGGTGCTTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp ACCCGAGCCAGCACCAGCTACATTCTTTCTATGCTCTaGATCTGCTGCATCATCTGCAGTAGTTCACATGCT +
Preference number: 3 (lower is better)
Translates to: TRASTSYILSML*ICCIICSSSHA
Trigger: AGCATGTGAACTACTGCAGATGATGCAGCAGATGCAGAGCATAGAAAGAATGTAGCTGGTGCTGGCTCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp CTCTTTCTCAAAACCTGGATTTTCCGAGTGCCTGGATaGCAGCCATGTGTCACAACTCCCAGCTGTTATCCA +
Preference number: 3 (lower is better)
Translates to: LFLKTWIFRVPG*QPCVTTPSCYP
Trigger: TGGATAACAGCTGGGAGTTGTGACACATGGCTGCCATCCAGGCACTCGGAAAATCCAGGTTTTGAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp CACTCTCTTTCTCAAAACCTGGATTTTCCGAGTGCCTaGATGGCAGCCATGTGTCACAACTCCCAGCTGTTA +
Preference number: 3 (lower is better)
Translates to: HSLSQNLDFPSA*MAAMCHNSQLL
Trigger: TAACAGCTGGGAGTTGTGACACATGGCTGCCATCCAGGCACTCGGAAAATCCAGGTTTTGAGAAAGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp TGGGACACTCTTTATTTAAAGCTGTCCAAGGTTGGATaGCTAACCAGAGGCAGAAGGACCCAACATGGGGTG +
Preference number: 3 (lower is better)
Translates to: WDTLYLKLSKVG*LTRGRRTQHGV
Trigger: CACCCCATGTTGGGTCCTTCTGCCTCTGGTTAGCCATCCAACCTTGGACAGCTTTAAATAAAGAGTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp CAAAACGACTCCTGGCCCAGACAGAAAGTTAACTCGTaGAGGCATAGGACAGAAGCCAATATAGGCATGGTT +
Preference number: 3 (lower is better)
Translates to: QNDSWPRQKVNS*RHRTEANIGMV
Trigger: AACCATGCCTATATTGGCTTCTGTCCTATGCCTGCACGAGTTAACTTTCTGTCTGGGCCAGGAGTCGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp ACCATGGGAGGTCTTGGAAGACAGAAAGACTTTCTCTaGTCTTTCTGCGACAGACTGAAGAGACAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: TMGGLGRQKDFL*SFCDRLKRQCR
Trigger: TCTGCACTGTCTCTTCAGTCTGTCGCAGAAAGAGCAGAGAAAGTCTTTCTGTCTTCCAAGACCTCCCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp AACCTGGGACACTCTTTATTTAAAGCTGTCCAAGGTTaGATGGCTAACCAGAGGCAGAAGGACCCAACATGG +
Preference number: 3 (lower is better)
Translates to: NLGHSLFKAVQG*MANQRQKDPTW
Trigger: CCATGTTGGGTCCTTCTGCCTCTGGTTAGCCATCCAACCTTGGACAGCTTTAAATAAAGAGTGTCCCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GCACTCCATAGACATTGGGAGGGAATAGATCTGGAGTaGTTGCAGAACAACACTGTGACACAGCTTTCTCAC +
Preference number: 3 (lower is better)
Translates to: ALHRHWEGIDLE*LQNNTVTQLSH
Trigger: GTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCTATTCCCTCCCAATGTCTATGGAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGGGCTGTTATATTCTATaGGCGTGTGTGTATGAATAT +
Preference number: 3 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGGCYIL*ACVYEY
Trigger: ATATTCATACACACACGCCAATAGAATATAACAGCC...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp ACAGGATCCAGCCATAACCCCATGTGTCCTGAACATCAAGACTGTGAGGCCAAGCTCTCTGGAAATGTCTaGAAGGGAAATAGGCATTCT +
Preference number: 3 (lower is better)
Translates to: TGSSHNPMCPEHQDCEAKLSGNV*KGNRHS
Trigger: AGAATGCCTATTTCCCTTCAAGACATTTCCAGAGAG...CTTGGCCTCACAGTCTTGATGTTCAGGACACATGGGGTTATGGCTGGATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp ACAGGATCCAGCCATAACCCCATGTGTCCTGAACATCAAGACTGTGAGGCCAAGATTCTCACCTTTTTCTaGGAACATCTTAACGCATCA +
Preference number: 3 (lower is better)
Translates to: TGSSHNPMCPEHQDCEAKILTFF*EHLNAS
Trigger: TGATGCGTTAAGATGTTCCAAGAAAAAGGTGAGAAT...CTTGGCCTCACAGTCTTGATGTTCAGGACACATGGGGTTATGGCTGGATCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp GTGCAAGGTAGAGGAGATGAAGGTGGGTGTGTTCATGGGACAGTGGAAGTCACTTATACAGTCCAACTTTaGGATTGCTTCACAATTTGG +
Preference number: 3 (lower is better)
Translates to: VQGRGDEGGCVHGTVEVTYTVQL*DCFTIW
Trigger: CCAAATTGTGAAGCAATCCAAAAGTTGGACTGTATA...AGTGACTTCCACTGTCCCATGAACACACCCACCTTCATCTCCTCTACCTTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp TTTACATATACAGCACAGCTCATATCATCTCGACACTaGATCTCCATAGGACTGCTGGAAAGTGCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: FTYTAQLISSRH*ISIGLLESAAV
Trigger: CACAGCAGCACTTTCCAGCAGTCCTATGGAGATGCAGTGTCGAGATGATATGAGCTGTGCTGTATATGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GTAGAGGAGATGAAGGTGGGTGTGTTCATGGGACAGTaGAAGTCACTTTCTTTCACACTATTACTAGTGTGC +
Preference number: 3 (lower is better)
Translates to: VEEMKVGVFMGQ*KSLSFTLLLVC
Trigger: GCACACTAGTAATAGTGTGAAAGAAAGTGACTTCCACTGTCCCATGAACACACCCACCTTCATCTCCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp CGACAGTATGATGTGCTCCTGAAAGGTAGCTCTGTTCACAGGGGACATGTACCAATTCTCACCTTTTTCTaGGAACATCTTAACGCATCA +
Preference number: 3 (lower is better)
Translates to: RQYDVLLKGSSVHRGHVPILTFF*EHLNAS
Trigger: TGATGCGTTAAGATGTTCCAAGAAAAAGGTGAGAAT...TGGTACATGTCCCCTGTGAACAGAGCTACCTTTCAGGAGCACATCATACTGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR TCA 72 bp CCACCTTACCAGGACTTCCAACTAACCAAACTACAATaGATTTCTCTAGGAGAAAGGGGTAGCGGGAATACA +
Preference number: 3 (lower is better)
Translates to: PPYQDFQLTKLQ*ISLGERGSGNT
Trigger: TGTATTCCCGCTACCCCTTTCTCCTAGAGAAATTCATTGTAGTTTGGTTAGTTGGAAGTCCTGGTAAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp TTTGTGTGCATGAACATGTTCTACTTCATCCCACAATaGCTGGTGTGCAGTGTCACATTCCACATTAGACCA +
Preference number: 3 (lower is better)
Translates to: FVCMNMFYFIPQ*LVCSVTFHIRP
Trigger: TGGTCTAATGTGGAATGTGACACTGCACACCAGGCATTGTGGGATGAAGTAGAACATGTTCATGCACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GAACTAAAGTTACTTCAGTTACTGCCCTGTGGATGCTaGGAATGGAACCCATTCTCTGAAAATGCAAACTGC +
Preference number: 3 (lower is better)
Translates to: ELKLLQLLPCGC*EWNPFSENANC
Trigger: GCAGTTTGCATTTTCAGAGAATGGGTTCCATTCCCAGCATCCACAGGGCAGTAACTGAAGTAACTTTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp AAAACACTAGTCTGGGTAAAACACTGGCCTGTCTCATaGCATAACCATGGACTGAGTATATGCTCTGATACC +
Preference number: 3 (lower is better)
Translates to: KTLVWVKHWPVS*HNHGLSICSDT
Trigger: GGTATCAGAGCATATACTCAGTCCATGGTTATGCCATGAGACAGGCCAGTGTTTTACCCAGACTAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp TTGAGCTTAGCTTCTAACACCAGATGCACTAATGACTaGAGCAGGCCAGTCATAAAACAGACCAGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: LSLASNTRCTND*SRPVIKQTRKE
Trigger: TTCTTTCCTGGTCTGTTTTATGACTGGCCTGCTCCAGTCATTAGTGCATCTGGTGTTAGAAGCTAAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR-3UTR CAA 90 bp AAACACTGGCCTGTCTCATGGCATAACCATGGACTGAGTATATGCTCTGATACCTATAACTTCTCTTGTTaGTGTGGGTGGTGTGAAGAA +
Preference number: 3 (lower is better)
Translates to: KHWPVSWHNHGLSICSDTYNFSC*CGWCEE
Trigger: TTCTTCACACCACCCACACAAACAAGAGAAGTTATA...GGTATCAGAGCATATACTCAGTCCATGGTTATGCCATGAGACAGGCCAGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp AAAGCCACATGTGTTTGCCCCAAATCAAATGCATGTTaGCTGTGGTCACAAACTCTACTTTATCCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: KATCVCPKSNAC*LWSQTLLYPVF
Trigger: GAACACTGGATAAAGTAGAGTTTGTGACCACAGCCAACATGCATTTGATTTGGGGCAAACACATGTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CCA 72 bp TTAGTCTTAAGACAAAAAGAAAACGAGAAACTAGCCTaGCCATGGACATGTCAACGTTCCGCAAACACTCAG +
Preference number: 3 (lower is better)
Translates to: LVLRQKENEKLA*PWTCQRSANTQ
Trigger: CTGAGTGTTTGCGGAACGTTGACATGTCCATGGCCAGGCTAGTTTCTCGTTTTCTTTTTGTCTTAAGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp AATATGTTAGATGCCTGTAAAAATCAAAACGACTCCTaGCCCAGACAGAAAGTTAACTCGTGCAGGCATAGG +
Preference number: 3 (lower is better)
Translates to: NMLDACKNQNDS*PRQKVNSCRHR
Trigger: CCTATGCCTGCACGAGTTAACTTTCTGTCTGGGCCAGGAGTCGTTTTGATTTTTACAGGCATCTAACATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp AGAGAGAAAAGATATCAAACTAGTTGCCACACTAGTTaGTTGTCTTCAGCAAGAGCACAAAGACCATGGGAG +
Preference number: 3 (lower is better)
Translates to: REKRYQTSCHTS*LSSARAQRPWE
Trigger: CTCCCATGGTCTTTGTGCTCTTGCTGAAGACAACCAACTAGTGTGGCAACTAGTTTGATATCTTTTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp CCAGTCAGTAAAGTGCTTGCCCTGAGGATAAGAACTTaGGTTTGGATCTCCAGCACTTTTTGTTTTGTTGTT +
Preference number: 3 (lower is better)
Translates to: PVSKVLALRIRT*VWISSTFCFVV
Trigger: AACAACAAAACAAAAAGTGCTGGAGATCCAAACTCAAGTTCTTATCCTCAGGGCAAGCACTTTACTGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp TCTTCAGCATTTATATTCAGAAGATGGTGTGAACACTaGCACTGTTCTCAGAATAGTTTCATCCCTCAGACC +
Preference number: 3 (lower is better)
Translates to: SSAFIFRRWCEH*HCSQNSFIPQT
Trigger: GGTCTGAGGGATGAAACTATTCTGAGAACAGTGGCAGTGTTCACACCATCTTCTGAATATAAATGCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp GTGAACTACAGGCTTAGTGACACTGCTCACCAATTTTaGCTTACAGTAGATAAGAAATGTTGGCATGTCCTT +
Preference number: 3 (lower is better)
Translates to: VNYRLSDTAHQF*LTVDKKCWHVL
Trigger: AAGGACATGCCAACATTTCTTATCTACTGTAAGGCAAAATTGGTGAGCAGTGTCACTAAGCCTGTAGTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp CAGAATGCAGGGTTAATCGCTAACCCTTTTATCTGCTaGAAAATGGATGAATCCCTGAGTTGTGAAATGCTA +
Preference number: 3 (lower is better)
Translates to: QNAGLIANPFIC*KMDESLSCEML
Trigger: TAGCATTTCACAACTCAGGGATTCATCCATTTTCCAGCAGATAAAAGGGTTAGCGATTAACCCTGCATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp TTAAGACAAAAAGAAAACGAGAAACTAGCCTGGCCATaGACATGTCAACGTTCCGCAAACACTCAGTCTTTA +
Preference number: 3 (lower is better)
Translates to: LRQKENEKLAWP*TCQRSANTQSL
Trigger: TAAAGACTGAGTGTTTGCGGAACGTTGACATGTCCATGGCCAGGCTAGTTTCTCGTTTTCTTTTTGTCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp TTCAGATATGACAAAACACTAGTCTGGGTAAAACACTaGCCTGTCTCATGGCATAACCATGGACTGAGTATA +
Preference number: 3 (lower is better)
Translates to: FRYDKTLVWVKH*PVSWHNHGLSI
Trigger: TATACTCAGTCCATGGTTATGCCATGAGACAGGCCAGTGTTTTACCCAGACTAGTGTTTTGTCATATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp GCTCACCAATTTTGCCTTACAGTAGATAAGAAATGTTaGCATGTCCTTATTCAGCACCTAAGCAGACAATGC +
Preference number: 3 (lower is better)
Translates to: AHQFCLTVDKKC*HVLIQHLSRQC
Trigger: GCATTGTCTGCTTAGGTGCTGAATAAGGACATGCCAACATTTCTTATCTACTGTAAGGCAAAATTGGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp AATGTGATACAACGTGTAGCCATCAATAAGAGACTGTaGCTGCAGCCTGCTACTTGCTTATGCTTTAATAAC +
Preference number: 3 (lower is better)
Translates to: NVIQRVAINKRL*LQPATCLCFNN
Trigger: GTTATTAAAGCATAAGCAAGTAGCAGGCTGCAGTCACAGTCTCTTATTGATGGCTACACGTTGTATCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR TCA 72 bp CATGGACTGAGTATATGCTCTGATACCAATTTTCTGTaGTGTAGCTCTTCCAAGGAACTTCTTTGCTTAGGT +
Preference number: 3 (lower is better)
Translates to: HGLSICSDTNFL*CSSSKELLCLG
Trigger: ACCTAAGCAAAGAAGTTCCTTGGAAGAGCTACATCACAGAAAATTGGTATCAGAGCATATACTCAGTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp ACATGTGTTTGCCCCAAATCAAATGCATGTTGGCTGTaGTCACAAACTCTACTTTATCCAGTGTTCAATCAT +
Preference number: 3 (lower is better)
Translates to: TCVCPKSNACWL*SQTLLYPVFNH
Trigger: ATGATTGAACACTGGATAAAGTAGAGTTTGTGACCACAGCCAACATGCATTTGATTTGGGGCAAACACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CCA 72 bp CTAAGAATCCAACTTGGTGCTCATGTGAGTTTACCATaGTCTGAATGTCTCTCCAAAATTGAAGCACTGAAA +
Preference number: 3 (lower is better)
Translates to: LRIQLGAHVSLP*SECLSKIEALK
Trigger: TTTCAGTGCTTCAATTTTGGAGAGACATTCAGACCATGGTAAACTCACATGAGCACCAAGTTGGATTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp AAAACACTTGAGAGAAAACTACATACAAGAATGTACTaGTGTCAGCCATGTGACAATGCCCATGTCTTAAGA +
Preference number: 3 (lower is better)
Translates to: KTLERKLHTRMY*CQPCDNAHVLR
Trigger: TCTTAAGACATGGGCATTGTCACATGGCTGACAGCAGTACATTCTTGTATGTAGTTTTCTCTCAAGTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR TCA 72 bp CATGTGTCACAACTCCCAGCTGTTATCCATGATATATaGATAAGAGATTTTAAGTTCAGTCAGTCACACAAA +
Preference number: 3 (lower is better)
Translates to: HVSQLPAVIHDI*IRDFKFSQSHK
Trigger: TTTGTGTGACTGACTGAACTTAAAATCTCTTATTCATATATCATGGATAACAGCTGGGAGTTGTGACACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR GCA 72 bp CATTTCTATTATAGAGAGAAAAGATATCAAACTAGTTaGCACACTAGTTGGTTGTCTTCAGCAAGAGCACAA +
Preference number: 3 (lower is better)
Translates to: HFYYREKRYQTS*HTSWLSSARAQ
Trigger: TTGTGCTCTTGCTGAAGACAACCAACTAGTGTGGCAACTAGTTTGATATCTTTTCTCTCTATAATAGAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CCA 72 bp TTTAGTATTAAGAGTCTGAGCTGCCAAGTAGTCAAATaGAAGATAACCAATATAGCGAAACATACTGCAAAC +
Preference number: 3 (lower is better)
Translates to: FSIKSLSCQVVK*KITNIAKHTAN
Trigger: GTTTGCAGTATGTTTCGCTATATTGGTTATCTTCCATTTGACTACTTGGCAGCTCAGACTCTTAATACTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CCA 72 bp ACACAATTAGGAGCCAGTTTGTTTATGCCGACATTTTaGCAGATTTCAATATGTAGTTTTCTTAATAGCCAA +
Preference number: 3 (lower is better)
Translates to: TQLGASLFMPTF*QISICSFLNSQ
Trigger: TTGGCTATTAAGAAAACTACATATTGAAATCTGCCAAAATGTCGGCATAAACAAACTGGCTCCTAATTGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CCA 90 bp TCTGTAGTAGCCAAGAAGGCTCACCCTCAGGAGCCAGGGAGCTGCCCCTCTGAGCAAAAGCAACGTGAGTaGCCTTTATTCTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVVAKKAHPQEPGSCPSEQKQRE*PLFLVS
Trigger: TGACACCAAGAATAAAGGCCACTCACGTTGCTTTTG...CTCAGAGGGGCAGCTCCCTGGCTCCTGAGGGTGAGCCTTCTTGGCTACTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 72 bp AACTACGAGCATCCACTTCCACACCCCACTGTCTCCTaGAGAAACAGGAAAGGACCAGATGGCATCCCATCC +
Preference number: 4 (lower is better)
Translates to: NYEHPLPHPTVS*RNRKGPDGIPS
Trigger: GGATGGGATGCCATCTGGTCCTTTCCTGTTTCTCAAGGAGACAGTGGGGTGTGGAAGTGGATGCTCGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR GCA 90 bp AACATGGGGTGGGTGGTCTGCCTGCAGACAGGCTGGTGCCTACAAGAGGTGCAGCAATCCAGTCAACTGTaGTTTGATGATTCGCTAGAT +
Preference number: 4 (lower is better)
Translates to: NMGWVVCLQTGWCLQEVQQSSQL*FDDSLD
Trigger: ATCTAGCGAATCATCAAAGCACAGTTGACTGGATTG...CTGCACCTCTTGTAGGCACCAGCCTGTCTGCAGGCAGACCACCCACCCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CCA 90 bp GTACTAACAAAGCAGCTCAGTAGCTGGGCTACTAGAAGCTCTGACAAAGGAGACCGCATAGAGTACGTGTaGAGCACCAGGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLTKQLSSWATRSSDKGDRIEYV*STRDSS
Trigger: GCTGCTGTCCCTGGTGCTCCACACGTACTCTATGCG...GTCTCCTTTGTCAGAGCTTCTAGTAGCCCAGCTACTGAGCTGCTTTGTTAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR GCA 90 bp GGTGCCCATGTACAGTTTCCTTCCGGACTCCGTCATCAGCATGACAGCAGTCAAGTTTTGGGCACTGTTTaGAGAGAAACTCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: GAHVQFPSGLRHQHDSSQVLGTV*RETQSW
Trigger: CCATGACTGAGTTTCTCTGCAAACAGTGCCCAAAAC...TTGACTGCTGTCATGCTGATGACGGAGTCCGGAAGGAAACTGTACATGGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
CDS-3UTR CCA 90 bp ATCAGCATGACAGCAGTCAAACTCCCCAAGATCAACACTGAAGGTAAAGTCTTCCTAGGGCATCCTGTCTaGCAGCCAGCATGTCCGCAA +
Preference number: 4 (lower is better)
Translates to: ISMTAVKLPKINTEGKVFLGHPV*QPACPQ
Trigger: TTGCGGACATGCTGGCTGCCAGACAGGATGCCCTAG...GAAGACTTTACCTTCAGTGTTGATCTTGGGGAGTTTGACTGCTGTCATGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR CAA 72 bp CGGGGATCTTATGCCCCCTTCTGGCCTGTATGGGTGTaGCACTCATGTGCACAAACCCATTTAAATCACCTA +
Preference number: 4 (lower is better)
Translates to: RGSYAPFWPVWV*HSCAQTHLNHL
Trigger: TAGGTGATTTAAATGGGTTTGTGCACATGAGTGCAACACCCATACAGGCCAGAAGGGGGCATAAGATCCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR TCA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGTCTTTCTGGATCTGGTaGATCATAGAACTCTATGAG +
Preference number: 4 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGSFWIW*IIELYE
Trigger: CTCATAGAGTTCTATGATTCACCAGATCCAGAAAGA...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CCA 90 bp GGTGCCCATGTACAGTTTCCTTCCGGACTCCGTCATCAGCATGACAGCAGTCAACAAAAGCAACGTGAGTaGCCTTTATTCTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GAHVQFPSGLRHQHDSSQQKQRE*PLFLVS
Trigger: TGACACCAAGAATAAAGGCCACTCACGTTGCTTTTG...TTGACTGCTGTCATGCTGATGACGGAGTCCGGAAGGAAACTGTACATGGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
CDS-3UTR CCA 90 bp TTCCCAACACCTATTCCAGGCAGTTCACAACAGCCTGACACTCTAGAGCCGGGGTCTTCACACTTAGTCTaGAATGAACACTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPTPIPGSSQQPDTLEPGSSHLV*NEHFSQ
Trigger: CTGGGAAAAGTGTTCATTCCAGACTAAGTGTGAAGA...CCCCGGCTCTAGAGTGTCAGGCTGTTGTGAACTGCCTGGAATAGGTGTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 72 bp TGTGAGCCTCCATATGAGTGCTGGGAACTGAAGCCCTaGAAAGAGTGGCATGTGTTCCTAACTACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: CEPPYECWELKP*KEWHVFLTTEL
Trigger: TAGCTCAGTAGTTAGGAACACATGCCACTCTTTCAAGGGCTTCAGTTCCCAGCACTCATATGGAGGCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR TCA 90 bp GTGCAAGGTAGAGGAGATGAAGGTGGGTGTGTTCATGGGACAGTGGAAGTCACTACACTTAGTCTGGAATaGACACTTTTCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: VQGRGDEGGCVHGTVEVTTLSLE*TLFPGN
Trigger: ATTTCCTGGGAAAAGTGTTCATTCCAGACTAAGTGT...AGTGACTTCCACTGTCCCATGAACACACCCACCTTCATCTCCTCTACCTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR GCA 90 bp CAGTATGATGTGCTCCTGAAAGGTAGCTCTGTTCACAGGGGACATGTACCAACATTCCATACAACCAGGTaGCCATGTACAGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QYDVLLKGSSVHRGHVPTFHTTR*PCTVSF
Trigger: GAAGGAAACTGTACATGGGCACCTGGTTGTATGGAA...TGTTGGTACATGTCCCCTGTGAACAGAGCTACCTTTCAGGAGCACATCATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 72 bp CCCATGTGTCCTGAACATCAAGACTGTGAGGCCAAGTaGAGCTTAGCTTCTAACACCAGATGCACTAATGAC +
Preference number: 4 (lower is better)
Translates to: PMCPEHQDCEAK*SLASNTRCTND
Trigger: GTCATTAGTGCATCTGGTGTTAGAAGCTAAGCTCAACTTGGCCTCACAGTCTTGATGTTCAGGACACATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CCA 90 bp TCACAGCAGAGCTTCAAGTCTATTCTGACACTTTACACATTATTCTCTGTAGAACGCATAGAGTACGTGTaGAGCACCAGGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQQSFKSILTLYTLFSVERIEYV*STRDSS
Trigger: GCTGCTGTCCCTGGTGCTCCACACGTACTCTATGCG...TTCTACAGAGAATAATGTGTAAAGTGTCAGAATAGACTTGAAGCTCTGCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CCA 90 bp ACATGTACCAACAGTGTGGCTCCATGGAAATCAAAGAGAAATAACACATTTATCCTAGGGCATCCTGTCTaGCAGCCAGCATGTCCGCAA +
Preference number: 4 (lower is better)
Translates to: TCTNSVAPWKSKRNNTFILGHPV*QPACPQ
Trigger: TTGCGGACATGCTGGCTGCCAGACAGGATGCCCTAG...GATAAATGTGTTATTTCTCTTTGATTTCCATGGAGCCACACTGTTGGTACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 72 bp CTCCATAGACATTGGGAGGGAATAGATCTGGAGTGGTaGCAGAACAACACTGTGACACAGCTTTCTCACTAT +
Preference number: 4 (lower is better)
Translates to: LHRHWEGIDLEW*QNNTVTQLSHY
Trigger: ATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCTATTCCCTCCCAATGTCTATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR TCA 90 bp AGATCTGGAGTGGTTGCAGAACAACACTGTGACACAGCTTTCTCACTATTGCCTGAATCAAAAGCAACGTaGGTGGCCTTTATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSGVVAEQHCDTAFSLLPESKAT*VAFILG
Trigger: ACCAAGAATAAAGGCCACTCACGTTGCTTTTGATTC...AGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CCA 90 bp ATCAGCATGACAGCAGTCAAACTCCCCAAGATCAACACTGAAGGTAAAGTCTTCCAGCAAATGCCTGACTaGCTGAAAGGAGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: ISMTAVKLPKINTEGKVFQQMPD*LKGVLC
Trigger: ACACAAAACTCCTTTCAGCCAGTCAGGCATTTGCTG...GAAGACTTTACCTTCAGTGTTGATCTTGGGGAGTTTGACTGCTGTCATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
3UTR CAA 72 bp GAGAAAAGATATCAAACTAGTTGCCACACTAGTTGGTaGTCTTCAGCAAGAGCACAAAGACCATGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: EKRYQTSCHTSW*SSARAQRPWEV
Trigger: GACCTCCCATGGTCTTTGTGCTCTTGCTGAAGACAACCAACTAGTGTGGCAACTAGTTTGATATCTTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
3UTR CAA 72 bp GATGTCAAAGCTGAAGATTTCACTTGTCAGCTTCCCTaGCAGCTAAATGAAGCCTGTACTAAGTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DVKAEDFTCQLP*QLNEACTKFQA
Trigger: TGCCTGGAACTTAGTACAGGCTTCATTTAGCTGCAAGGGAAGCTGACAAGTGAAATCTTCAGCTTTGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR TCA 90 bp AGAGACTGTGACTGCAGCCTGCTACTTGCTTATGCTTTAATAACAAACCACAGGATCTCAAAGCGCTCATaGAGCCACTTTTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: RDCDCSLLLAYALITNHRISKRS*SHFFMC
Trigger: ACACATGAAAAAGTGGCTTCATGAGCGCTTTGAGAT...CCTGTGGTTTGTTATTAAAGCATAAGCAAGTAGCAGGCTGCAGTCACAGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
CDS-3UTR GCA 90 bp TGCAGCCTGCTACTTGCTTATGCTTTAATAACAAACCACAGGCAGCCAAGGAGGGAGTTTTGTGTATGTTaGATTATACCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CSLLLAYALITNHRQPRREFCVC*IIPCSL
Trigger: GAGGGAACAAGGTATAATGCAACATACACAAAACTC...CCTCCTTGGCTGCCTGTGGTTTGTTATTAAAGCATAAGCAAGTAGCAGGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
CDS-3UTR GCA 90 bp CAACATAGAAACACGGCAAATCACACGTTAGAAAGCCTCTTCTCACAGGACACACAATCCAGTCAACTGTaGTTTGATGATTCGCTAGAT +
Preference number: 4 (lower is better)
Translates to: QHRNTANHTLESLFSQDTQSSQL*FDDSLD
Trigger: ATCTAGCGAATCATCAAAGCACAGTTGACTGGATTG...TGTGTCCTGTGAGAAGAGGCTTTCTAACGTGTGATTTGCCGTGTTTCTATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 72 bp AAAAGCCACATGTGTTTGCCCCAAATCAAATGCATGTaGGCTGTGGTCACAAACTCTACTTTATCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KSHMCLPQIKCM*AVVTNSTLSSV
Trigger: AACACTGGATAAAGTAGAGTTTGTGACCACAGCCAACATGCATTTGATTTGGGGCAAACACATGTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 72 bp GAGACACAGACACACACCCCAGTTCTCCAGCGTAACTaGGATGATCTCATTTCTATTATAGAGAGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: ETQTHTPVLQRN*DDLISIIERKD
Trigger: ATCTTTTCTCTCTATAATAGAAATGAGATCATCCAAGTTACGCTGGAGAACTGGGGTGTGTGTCTGTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR TCA 90 bp ACCAACAGTGTGGCTCCATGGAAATCAAAGAGAAATAACACATTTATCCAATCCGAATCAAAAGCAACGTaGGTGGCCTTTATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TNSVAPWKSKRNNTFIQSESKAT*VAFILG
Trigger: ACCAAGAATAAAGGCCACTCACGTTGCTTTTGATTC...GGATTGGATAAATGTGTTATTTCTCTTTGATTTCCATGGAGCCACACTGTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR TCA 90 bp ACATGTACCAACAGTGTGGCTCCATGGAAATCAAAGAGAAATAACACATTTATCATCTCAAAGCGCTCATaGAGCCACTTTTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: TCTNSVAPWKSKRNNTFIISKRS*SHFFMC
Trigger: ACACATGAAAAAGTGGCTTCATGAGCGCTTTGAGAT...GATAAATGTGTTATTTCTCTTTGATTTCCATGGAGCCACACTGTTGGTACATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 72 bp GTTGCAGAACAACACTGTGACACAGCTTTCTCACTATaGCCTGTTTTTCTACTAAGATTAAACTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: VAEQHCDTAFSL*PVFLLRLNFKN
Trigger: GTTCTTGAAGTTTAATCTTAGTAGAAAAACAGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR GCA 90 bp ACATGTACCAACAGTGTGGCTCCATGGAAATCAAAGAGAAATAACACATTTATCGAGTTTTGTGTATGTTaGATTATACCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TCTNSVAPWKSKRNNTFIEFCVC*IIPCSL
Trigger: GAGGGAACAAGGTATAATGCAACATACACAAAACTC...GATAAATGTGTTATTTCTCTTTGATTTCCATGGAGCCACACTGTTGGTACATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
3UTR CAA 72 bp TTCAAATGTAGATCTGGTACACAATTAGGAGCCAGTTaGTTTATGCCGACATTTTGGCAGATTTCAATATGT +
Preference number: 4 (lower is better)
Translates to: FKCRSGTQLGAS*FMPTFWQISIC
Trigger: ACATATTGAAATCTGCCAAAATGTCGGCATAAACAAACTGGCTCCTAATTGTGTACCAGATCTACATTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp CCAGGGAGCTGCCCCTCTGAGTCAGGGCAGCACCACCTGCACCCCAACAGTGAAAGTTTTGGGCACTGTTaGCAGAGAAACTCAGTCATG +
Preference number: 5 (lower is better)
Translates to: PGSCPSESGQHHLHPNSESFGHC*QRNSVM
Trigger: CATGACTGAGTTTCTCTGCAAACAGTGCCCAAAACT...TTCACTGTTGGGGTGCAGGTGGTGCTGCCCTGACTCAGAGGGGCAGCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp GGAGCTGCCCCTCTGAGTCAGGGCAGCACCACCTGCACCCCAACAGTGAACAGCGAGTGGCCTTTATTCTaGGTGTCAGTACGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: GAAPLSQGSTTCTPTVNSEWPLF*VSVRVL
Trigger: TAAAACACGTACTGACACCAAGAATAAAGGCCACTC...GCTGTTCACTGTTGGGGTGCAGGTGGTGCTGCCCTGACTCAGAGGGGCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp GAGCCAGGCAGAAGGCACGTGCGAGGACAGAGAGGATGCTGGCAGACTTTCATCAGTTTTGGGCACTGTTaGCAGAGAAACTCAGTCATG +
Preference number: 5 (lower is better)
Translates to: EPGRRHVRGQRGCWQTFISFGHC*QRNSVM
Trigger: CATGACTGAGTTTCTCTGCAAACAGTGCCCAAAACT...GATGAAAGTCTGCCAGCATCCTCTCTGTCCTCGCACGTGCCTTCTGCCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp TCTGTAGTAGCCAAGAAGGCTCACCCTCAGGAGCCAGGGAGCTGCCCCTCTGAGTCATGGATGGTGGATTaGAGTATTTTCCTGAACCTT +
Preference number: 5 (lower is better)
Translates to: SVVAKKAHPQEPGSCPSESWMVD*SIFLNL
Trigger: AAGGTTCAGGAAAATACTCAAATCCACCATCCATGA...CTCAGAGGGGCAGCTCCCTGGCTCCTGAGGGTGAGCCTTCTTGGCTACTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp GGTGCCCATGTACAGTTTCCTTCCGGACTCCGTCATCAGCATGACAGCAGTCAAATGTTGCATTATACCTaGTTCCCTCTGGGAAAATCA +
Preference number: 5 (lower is better)
Translates to: GAHVQFPSGLRHQHDSSQMLHYT*FPLGKS
Trigger: TGATTTTCCCAGAGGGAACAAGGTATAATGCAACAT...TTGACTGCTGTCATGCTGATGACGGAGTCCGGAAGGAAACTGTACATGGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
CDS-3UTR CAA 90 bp GGTGCCCATGTACAGTTTCCTTCCGGACTCCGTCATCAGCATGACAGCAGTCAATGGCTGAAAGGAGTTTaGTGTATGTTGCATTATACC +
Preference number: 5 (lower is better)
Translates to: GAHVQFPSGLRHQHDSSQWLKGV*CMLHYT
Trigger: GGTATAATGCAACATACACAAAACTCCTTTCAGCCA...TTGACTGCTGTCATGCTGATGACGGAGTCCGGAAGGAAACTGTACATGGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
CDS-3UTR CAA 90 bp GGTGCCCATGTACAGTTTCCTTCCGGACTCCGTCATCAGCATGACAGCAGTCAATCATGGATGGTGGATTaGAGTATTTTCCTGAACCTT +
Preference number: 5 (lower is better)
Translates to: GAHVQFPSGLRHQHDSSQSWMVD*SIFLNL
Trigger: AAGGTTCAGGAAAATACTCAAATCCACCATCCATGA...TTGACTGCTGTCATGCTGATGACGGAGTCCGGAAGGAAACTGTACATGGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033847.5
CDS-3UTR CAA 90 bp CGACAGTATGATGTGCTCCTGAAAGGTAGCTCTGTTCACAGGGGACATGTACCACTTTTTCATGTGTTCTaGTTCCTCTGGAACTTCATT +
Preference number: 5 (lower is better)
Translates to: RQYDVLLKGSSVHRGHVPLFHVF*FLWNFI
Trigger: AATGAAGTTCCAGAGGAACAAGAACACATGAAAAAG...TGGTACATGTCCCCTGTGAACAGAGCTACCTTTCAGGAGCACATCATACTGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp AGATCTGGAGTGGTTGCAGAACAACACTGTGACACAGCTTTCTCACTATTGCCTATGTTGCATTATACCTaGTTCCCTCTGGGAAAATCA +
Preference number: 5 (lower is better)
Translates to: RSGVVAEQHCDTAFSLLPMLHYT*FPLGKS
Trigger: TGATTTTCCCAGAGGGAACAAGGTATAATGCAACAT...AGGCAATAGTGAGAAAGCTGTGTCACAGTGTTGTTCTGCAACCACTCCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp GTGAGTTCTAGCACAGCCAGGGATAGATACACAGAGAAACCTTGTCTCAAAAACGAGTGGCCTTTATTCTaGGTGTCAGTACGTGTTTTA +
Preference number: 5 (lower is better)
Translates to: VSSSTARDRYTEKPCLKNEWPLF*VSVRVL
Trigger: TAAAACACGTACTGACACCAAGAATAAAGGCCACTC...GTTTTTGAGACAAGGTTTCTCTGTGTATCTATCCCTGGCTGTGCTAGAACTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp GCAATCACGCTTAAATCACAACATAGAAACACGGCAAATCACACGTTAGAAAGCGGAGTTTTGTGTATGTaGCATTATACCTTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: AITLKSQHRNTANHTLESGVLCM*HYTLFP
Trigger: AGGGAACAAGGTATAATGCAACATACACAAAACTCC...GCTTTCTAACGTGTGATTTGCCGTGTTTCTATGTTGTGATTTAAGCGTGATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp ACTAGTAGGCAATCACGCTTAAATCACAACATAGAAACACGGCAAATCACACGTCTTTTTCATGTGTTCTaGTTCCTCTGGAACTTCATT +
Preference number: 5 (lower is better)
Translates to: TSRQSRLNHNIETRQITRLFHVF*FLWNFI
Trigger: AATGAAGTTCCAGAGGAACAAGAACACATGAAAAAG...ACGTGTGATTTGCCGTGTTTCTATGTTGTGATTTAAGCGTGATTGCCTACTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS-3UTR CAA 90 bp GCAACTAGGTTATTATCCAAGGTATATTATATGAAAGTGAGATCTCTGGCCTCTGGAGTTTTGTGTATGTaGCATTATACCTTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: ATRLLSKVYYMKVRSLASGVLCM*HYTLFP
Trigger: AGGGAACAAGGTATAATGCAACATACACAAAACTCC...AGAGGCCAGAGATCTCACTTTCATATAATATACCTTGGATAATAACCTAGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149565.8
CDS CCA 72 bp AGAGCACCCGCCACAGCGTCCAGGCCAGCAGGTAGGTaGGCGCCGAGCCCAGCAACAGGACGCTGGGGAGCA +
Preference number: 6 (lower is better)
Translates to: RAPATASRPAGR*APSPATGRWGA
Trigger: TGCTCCCCAGCGTCCTGTTGCTGGGCTCGGCGCCCACCTACCTGCTGGCCTGGACGCTGTGGCGGGTGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS CCA 72 bp TCAGTACGTAGCGCACATGTCCTAGGGCATCCTGTCTaGCAGCCAGCATGTCCGCAACAATCCAGTCAACTG +
Preference number: 6 (lower is better)
Translates to: SVRSAHVLGHPV*QPACPQQSSQL
Trigger: CAGTTGACTGGATTGTTGCGGACATGCTGGCTGCCAGACAGGATGCCCTAGGACATGTGCGCTACGTACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS CCA 72 bp GAAGTTTTGGGCACTGTTTGCAGAGAAACTCAGTCATaGATGGTGGATTTGAGTATTTTCCTGAACCTTTCT +
Preference number: 6 (lower is better)
Translates to: EVLGTVCRETQS*MVDLSIFLNLS
Trigger: AGAAAGGTTCAGGAAAATACTCAAATCCACCATCCATGACTGAGTTTCTCTGCAAACAGTGCCCAAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS CAA 72 bp CTCAAAGCGCTCATGAAGCCACTTTTTCATGTGTTCTaGTTCCTCTGGAACTTCATTTCTGTCTATACGATC +
Preference number: 6 (lower is better)
Translates to: LKALMKPLFHVF*FLWNFISVYTI
Trigger: GATCGTATAGACAGAAATGAAGTTCCAGAGGAACAAGAACACATGAAAAAGTGGCTTCATGAGCGCTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8
CDS CAA 90 bp ATCTTTTATCTCAAAGCGCTCATGAAGCCACTTTTTCATGTGTTCTaGTTCCTCTGGAACTTCATTTCTGTCTATACGATCAAAGTGAAT +
Preference number: 6 (lower is better)
Translates to: IFYLKALMKPLFHVF*FLWNFISVYTIKVN
Trigger: ATTCACTTTGATCGTATAGACAGAAATGAAGTTCCAGAGGAACAAGAACACATGAAAAAGTGGCTTCATGAGCGCTTTGAGATAAAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033847.5
ENSMUST00000149565.8