Pregenerated sensors for AGMO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050103Ensembl transcript IDs: ENSMUST00000049874.14, ENSMUST00000159998.8, ENSMUST00000160390.2, ENSMUST00000160768.8
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGGTCCATTGTTCTGGATTTCATCCTTAGCCAGGAGACAGAGCTaGGACCCAGACCTCTGGGAACCTTCCCCTCCAGAGGAGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: QGPLFWISSLARRQS*DPDLWEPSPPEESW Trigger: CCAACTCTCCTCTGGAGGGGAAGGTTCCCAGAGGTCTGGGTCTCAGCTCTGTCTCCTGGCTAAGGATGAAATCCAGAACAATGGACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR-3UTR TCA 90 bp | GCCATCGTGTGTCCTGGGTCTCTCAGAGACCAGCTCACCCAGGAGAGCATGCGGCTCCAAGGAGGGCTCTaGCCCCAGGAATCAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: AIVCPGSLRDQLTQESMRLQGGL*PQESGE Trigger: CTCACCTGATTCCTGGGGTCAGAGCCCTCCTTGGAG...CCGCATGCTCTCCTGGGTGAGCTGGTCTCTGAGAGACCCAGGACACACGATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR CAA 90 bp | GAGCTGAGACCCAGACCTCTGGGAACCTTCCCCTCCAGAGGAGAGTaGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCAGGTGAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: ELRPRPLGTFPSRGE*ASKEGSDPRNQVRV Trigger: CACTCTCACCTGATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGTTCCCAGAGGTCTGGGTCTCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATTTACAGGAGAGCCTGTaGGCTGCAGAAGAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: TFPSRGELASKEGSDPRNLQESL*AAEETE Trigger: CTCTGTTTCTTCTGCAGCTCACAGGCTCTCCTGTAA...ATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCCCAGAGGACTCTCCAAACCCGCAGGCACCATAGCACACCCAGGATCTTAACCACAAGACTAAGGTaGGAGAGCCATCGTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SPQRTLQTRRHHSTPRILTTRLR*ESHRVS Trigger: GGACACACGATGGCTCTCTCACCTTAGTCTTGTGGT...TAAGATCCTGGGTGTGCTATGGTGCCTGCGGGTTTGGAGAGTCCTCTGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTGGATTTCATCCTTAGCCAGGAGACAGAGCTGAGACCCAGACCTCTGGGAACCCCAGGAATCAGGTaGGAGTGCCATCTTGTATCC | + |
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Preference number: 2 (lower is better) Translates to: VLDFILSQETELRPRPLGTPGIR*ECHLVS Trigger: GGATACAAGATGGCACTCTCACCTGATTCCTGGGGT...TCCCAGAGGTCTGGGTCTCAGCTCTGTCTCCTGGCTAAGGATGAAATCCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGATACAGTCTGCCCACTCCAGAAGATaGAACCCATACTTGACACTT | + |
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Preference number: 2 (lower is better) Translates to: MYIFLKYLGNRGHLRIQSAHSRR*NPYLTL Trigger: AAGTGTCAAGTATGGGTTCCATCTTCTGGAGTGGGC...AGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| 3UTR CAA 90 bp | CTATACTATACGTGCTTTCTGTTAATGTATATTTTTCTCAAGTACTaGGGTAACAGAGGCCATCTCAGGATACAGTCTTTTCGATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LYYTCFLLMYIFLKY*GNRGHLRIQSFRCE Trigger: TTCACATCGAAAAGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAAGCACGTATAGTATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| 3UTR-3UTR CAA 90 bp | GCCATCGTGTGTCCTGGGTCTCTCAGAGACCAGCTCACCCAGGAGAGCATGCGGCCCTCCAGAGGAGAGTaGGCCTCCAAGGAGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: AIVCPGSLRDQLTQESMRPSRGE*ASKEGS Trigger: AGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGG...CCGCATGCTCTCCTGGGTGAGCTGGTCTCTGAGAGACCCAGGACACACGATGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR TCA 72 bp | CCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTaGCCCCAGGAATCAGGTGAGAGTGCCATCTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: PLQRRVGLQGGL*PQESGESAILY Trigger: ATACAAGATGGCACTCTCACCTGATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR GCA 72 bp | CTGGGTCTCTCAGAGACCAGCTCACCCAGGAGAGCATaGGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGLSETSSPRRA*GPQKQQCFLDK Trigger: CTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATGCTCTCCTGGGTGAGCTGGTCTCTGAGAGACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR TCA 72 bp | CTGCCTCCAGAGAGGGCTCTGACCACAAGACTAAGGTaGGAGAGCCATCGTGTGTCCTGGGTCTCTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPPERALTTRLR*ESHRVSWVSQR Trigger: TCTCTGAGAGACCCAGGACACACGATGGCTCTCTCACCTTAGTCTTGTGGTCAGAGCCCTCTCTGGAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR TCA 72 bp | TGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCAGGTaGGAGTGCCATCTTGTATCCTGGGTCTCTCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: WPPRRALTPGIR*ECHLVSWVSLL Trigger: TAAGAGAGAGACCCAGGATACAAGATGGCACTCTCACCTGATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR TCA 72 bp | TTGTTCTGGATTTCATCCTTAGCCAGGAGACAGAGCTaGGACCCAGACCTCTGGGAACCTTCCCCTCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LFWISSLARRQS*DPDLWEPSPPE Trigger: CTCTGGAGGGGAAGGTTCCCAGAGGTCTGGGTCTCAGCTCTGTCTCCTGGCTAAGGATGAAATCCAGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR GCA 72 bp | ATCCTGGGTCTCTCTCTTACAGGAGAGCCTGTGAGCTaGAGAAGAAACAGAGCTTCTAGGACAGGGGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: ILGLSLTGEPVS*RRNRASRTGAL Trigger: AAGAGCCCCTGTCCTAGAAGCTCTGTTTCTTCTGCAGCTCACAGGCTCTCCTGTAAGAGAGAGACCCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR-3UTR CAA 90 bp | TTCACTTTGGCCATGAACTCGATGGACAGTCCCACAGTCCCCAGAGGACTCTCCCTTGGACAAGGTCCATaGTTCTGGATTTCATCCTTA | + |
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Preference number: 3 (lower is better) Translates to: FTLAMNSMDSPTVPRGLSLGQGP*FWISSL Trigger: TAAGGATGAAATCCAGAACAATGGACCTTGTCCAAG...GGAGAGTCCTCTGGGGACTGTGGGACTGTCCATCGAGTTCATGGCCAAAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGTTGAATGTCATCCAATaGCAGGAGCTATCCATACAA | + |
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Preference number: 3 (lower is better) Translates to: FLLMYIFLKYLGNRGHLRLNVIQ*QELSIQ Trigger: TTGTATGGATAGCTCCTGCAATTGGATGACATTCAA...CCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| 3UTR CAA 72 bp | CCCAGACCTCTGGGAACCTTCCCCTCCAGAGGAGAGTaGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCAG | + |
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Preference number: 4 (lower is better) Translates to: PRPLGTFPSRGE*ASKEGSDPRNQ Trigger: CTGATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGTTCCCAGAGGTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | TCCTGGGTCTCTCAGAGACCAGCTCACCCAGGAGAGCATGCGGGCCTCAGAAGCGCTAGGAGGCAGAGCTaGGCTCCAGACTTCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SWVSQRPAHPGEHAGLRSARRQS*APDFCA Trigger: TGCACAGAAGTCTGGAGCTCAGCTCTGCCTCCTAGC...GCTTCTGAGGCCCGCATGCTCTCCTGGGTGAGCTGGTCTCTGAGAGACCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | GCCATCGTGTGTCCTGGGTCTCTCAGAGACCAGCTCACCCAGGAGAGCATGCGGACTCAGGCCAAGTCTTaGTTTACCTGGACCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: AIVCPGSLRDQLTQESMRTQAKS*FTWTPS Trigger: GGATGGGGTCCAGGTAAACCAAGACTTGGCCTGAGT...CCGCATGCTCTCCTGGGTGAGCTGGTCTCTGAGAGACCCAGGACACACGATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | ACCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATTTCTCAGAAGAAGAGTaGCCTGGGACAGTACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TFPSRGELASKEGSDPRNFSEEE*PGTVPL Trigger: CAGCGGTACTGTCCCAGGTCACTCTTCTTCTGAGAA...ATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR GCA 90 bp | TCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCAGGTTCAGAACTGTGGTGTaGTTGGTGTGCTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPPEESWPPRRALTPGIRFRTVV*LVCCPE Trigger: TTCTGGGCAGCACACCAAGCACACCACAGTTCTGAA...CCTGATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR GCA 90 bp | CCCAGACCTCTGGGAACCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCAGCTCCAGACTTCTGTaGACCATCCCTCAAATGCAA | + |
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Preference number: 4 (lower is better) Translates to: PRPLGTFPSRGELASKEGSSRLL*TIPQMQ Trigger: TTGCATTTGAGGGATGGTGCACAGAAGTCTGGAGCT...GCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGTTCCCAGAGGTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCAGGTGAGAGTGCCATCACTTCAAGGCTCCTaGAGAACAGACTTGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GELASKEGSDPRNQVRVPSLQGS*RTDLEA Trigger: GGCTTCCAAGTCTGTTCTTCAGGAGCCTTGAAGTGA...TGGCACTCTCACCTGATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | CCCAGACCTCTGGGAACCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCGGAAGGCAGTTTCACTaGGCTCCATCATGTAAAACA | + |
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Preference number: 4 (lower is better) Translates to: PRPLGTFPSRGELASKEGGRQFH*APSCKT Trigger: TGTTTTACATGATGGAGCCCAGTGAAACTGCCTTCC...GCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGTTCCCAGAGGTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCAGGTGAGAGTGCCACCTGAAGAACAGACTTaGAAGCCGAGACACAACACC | + |
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Preference number: 4 (lower is better) Translates to: GELASKEGSDPRNQVRVPPEEQT*KPRHNT Trigger: GGTGTTGTGTCTCGGCTTCCAAGTCTGTTCTTCAGG...TGGCACTCTCACCTGATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCGGTCTCTTCATAAAATaGCAGCATTACTGCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: PSPPEESWPPRRALTPGIGLFIK*QHYCKL Trigger: CAGTTTGCAGTAATGCTGGCATTTTATGAAGAGACC...GATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | CCAGGAGAGCATGCGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTCATACCCTGAGAAACTaGAACATTGTCTTGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGEHAGLRSNSASWTRSIHTLRN*NIVLGS Trigger: GGAGCCCAAGACAATGTTTCAGTTTCTCAGGGTATG...AATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATGCTCTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR GCA 90 bp | ACCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCAGTACCGCTGTGTTTaGAAAGGTCTCTTCATAAAA | + |
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Preference number: 4 (lower is better) Translates to: TFPSRGELASKEGSDPRNQYRCV*KGLFIK Trigger: TTTTATGAAGAGACCTTTGCAAACACAGCGGTACTG...ATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTTTCTCAGAAGAAGAGTaGCCTGGGACAGTACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGFSEEE*PGTVPL Trigger: CAGCGGTACTGTCCCAGGTCACTCTTCTTCTGAGAA...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR TCA 90 bp | TTCACTTTGGCCATGAACTCGATGGACAGTCCCACAGTCCCCAGAGGACTCTCCATCATCCAAACGACCTaGTGGTTTCCCTTTGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: FTLAMNSMDSPTVPRGLSIIQTT*WFPFEN Trigger: ATTCTCAAAGGGAAACCATCAGGTCGTTTGGATGAT...GGAGAGTCCTCTGGGGACTGTGGGACTGTCCATCGAGTTCATGGCCAAAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | ACCCGCAGGCACCATAGCACACCCAGGATCTTAAGATCACTAAGGAGAGTCTGCGGGTTAGACCATATATaGCCTGCTCATTCTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TRRHHSTPRILRSLRRVCGLDHI*PAHSLL Trigger: AAGCAGAGAATGAGCAGGTCATATATGGTCTAACCC...GCAGACTCTCCTTAGTGATCTTAAGATCCTGGGTGTGCTATGGTGCCTGCGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| 3UTR CAA 72 bp | GCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATaGTTCTGGATTTCATCCTTAGCCAGGAGACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ASEATVLLGQGP*FWISSLARRQS Trigger: GCTCTGTCTCCTGGCTAAGGATGAAATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTCATACCCTGAGAAACTaGAACATTGTCTTGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGHTLRN*NIVLGS Trigger: GGAGCCCAAGACAATGTTTCAGTTTCTCAGGGTATG...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR GCA 90 bp | CATGCGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATCAGGAACTATACTGCTaGAAGACAGACTGTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: HAGLRSNSASWTRSIVLDQELYC*KTDCLS Trigger: ACTGAGACAGTCTGTCTTGCAGCAGTATAGTTCCTG...ATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTACCTCTTCAACAGTTTaGAAGGCAGTTTCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGTSSTV*KAVSLG Trigger: GCCCAGTGAAACTGCCTTCCAAACTGTTGAAGAGGT...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR CCA 90 bp | CATGCGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATAGGACAGAAAACTTATaGCAGAATCCAGGTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HAGLRSNSASWTRSIVLDRTENL*QNPGVV Trigger: GACCACACCTGGATTCTGCCATAAGTTTTCTGTCCT...ATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTATCGCTCGCATACCCTaGGAAACTGAAACATTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGIARIP*ETETLS Trigger: AGACAATGTTTCAGTTTCTCAGGGTATGCGAGCGAT...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR GCA 90 bp | CATGCGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATGTGTGCTTGGTGTGCTaGCCAGAAAATATTAATCTC | + |
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Preference number: 4 (lower is better) Translates to: HAGLRSNSASWTRSIVLDVCLVC*PENINL Trigger: GAGATTAATATTTTCTGGGCAGCACACCAAGCACAC...ATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | GTTCTGGATTTCATCCTTAGCCAGGAGACAGAGCTGAGACCCAGACCTCTGGGAACTGTCTCAGTGCTGTaGATAAGTTATAGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VLDFILSQETELRPRPLGTVSVL*ISYSLQ Trigger: CTGAAGACTATAACTTATCCACAGCACTGAGACAGT...TCCCAGAGGTCTGGGTCTCAGCTCTGTCTCCTGGCTAAGGATGAAATCCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCAGGTGAGAGTGCCATCTTGTATCCTGGGTCTCTCTCTTACAGGAGAGTATGAAAAGGGCCAGTaGACAGTAGAAAACCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RNQVRVPSCILGLSLTGEYEKGQ*TVENPG Trigger: TCCTGGGTTTTCTACTGTCCACTGGCCCTTTTCATA...CTCTCCTGTAAGAGAGAGACCCAGGATACAAGATGGCACTCTCACCTGATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTAGGACAGAAAACTTATaGCAGAATCCAGGTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGRTENL*QNPGVV Trigger: GACCACACCTGGATTCTGCCATAAGTTTTCTGTCCT...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR CCA 90 bp | GCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATTTCATCCTTAGCCAGGAAGTCTTGGTTTACCTaGACCCCATCCTGGTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: ATVLLGQGPLFWISSLARKSWFT*TPSWSF Trigger: AAAGGACCAGGATGGGGTCCAGGTAAACCAAGACTT...CCTGGCTAAGGATGAAATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | CGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATTTCAGCTGCCTTGGATCTTTaGTCCAGAAGAAAACCAATG | + |
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Preference number: 4 (lower is better) Translates to: RASEATVLLGQGPLFWISAALDL*SRRKPM Trigger: CATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGC...TGAAATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR GCA 90 bp | CATGCGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATGACCTGCTCATTCTCTaGTTCAAATGTCCCAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: HAGLRSNSASWTRSIVLDDLLIL*FKCPKN Trigger: ATTTTTGGGACATTTGAAGCAGAGAATGAGCAGGTC...ATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR GCA 90 bp | CGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATTTCAAAATGCCAGCATTACTaGAAACTGGAGGACAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: RASEATVLLGQGPLFWISKCQHY*KLEDSV Trigger: TACACTGTCCTCCAGTTTGCAGTAATGCTGGCATTT...TGAAATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCAGGTGAGAGTGCCATCTTGTATCCTGGGTCTCTCTCTTACAGGAGAGAAACTGCACGTTGAATaGCTCAAATGTACCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNQVRVPSCILGLSLTGEKLHVE*LKCTNG Trigger: CCCATTGGTACATTTGAGCCATTCAACGTGCAGTTT...CTCTCCTGTAAGAGAGAGACCCAGGATACAAGATGGCACTCTCACCTGATTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
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| CDS-3UTR TCA 90 bp | TTACTTCAAGGCCAGGAAAATACAGCAGTAGGGTATAACTTCTGCCTGCTTCCTCATACCCTGAGAAACTaGAACATTGTCTTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLQGQENTAVGYNFCLLPHTLRN*NIVLGS Trigger: GGAGCCCAAGACAATGTTTCAGTTTCTCAGGGTATG...AGGAAGCAGGCAGAAGTTATACCCTACTGCTGTATTTTCCTGGCCTTGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160768.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTGGTCTCTTCATAAAATaGCAGCATTACTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGGLFIK*QHYCKL Trigger: CAGTTTGCAGTAATGCTGGCATTTTATGAAGAGACC...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTACTGTCTCAGTGCTGTaGATAAGTTATAGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGTVSVL*ISYSLQ Trigger: CTGAAGACTATAACTTATCCACAGCACTGAGACAGT...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR TCA 90 bp | TACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGCAGGATCACTTCAAGGCTCCTaGAGAACAGACTTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YHVRYHSFSVMMYYGDAGSLQGS*RTDLEA Trigger: GGCTTCCAAGTCTGTTCTTCAGGAGCCTTGAAGTGA...TCCTGCATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | TACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGCAGGATTCAGAACTGTGGTGTaGTTGGTGTGCTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YHVRYHSFSVMMYYGDAGFRTVV*LVCCPE Trigger: TTCTGGGCAGCACACCAAGCACACCACAGTTCTGAA...TCCTGCATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR GCA 90 bp | AGGAATCAGGTGAGAGTGCCATCTTGTATCCTGGGTCTCTCTCTTACAGGAGAGAGACCATATATGACCTaGTCATTCTCTGCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNQVRVPSCILGLSLTGERPYMT*SFSASN Trigger: ATTTGAAGCAGAGAATGAGCAGGTCATATATGGTCT...CTCTCCTGTAAGAGAGAGACCCAGGATACAAGATGGCACTCTCACCTGATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATACTCAGGCCAAGTCTTaGTTTACCTGGACCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CRYHVRYHSFSVMMYYGDTQAKS*FTWTPS Trigger: GGATGGGGTCCAGGTAAACCAAGACTTGGCCTGAGT...ATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTACCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR TCA 90 bp | ATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGATACAGTCTTCACTTCAAGGCTCCTaGAGAACAGACTTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MYIFLKYLGNRGHLRIQSSLQGS*RTDLEA Trigger: GGCTTCCAAGTCTGTTCTTCAGGAGCCTTGAAGTGA...AGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR CCA 90 bp | GAGCAAAAGAAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGGAAGGCAGTTTCACTaGGCTCCATCATGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: EQKKGVILGGWRNGDDLGGRQFH*APSCKT Trigger: TGTTTTACATGATGGAGCCCAGTGAAACTGCCTTCC...TCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTTCTTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGTAGGGTATAACTTCTGCCTGCTTCCTCTAATACAAACATTTGGGTACGGAAGGCAGTTTCACTaGGCTCCATCATGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TAVGYNFCLLPLIQTFGYGRQFH*APSCKT Trigger: TGTTTTACATGATGGAGCCCAGTGAAACTGCCTTCC...GTACCCAAATGTTTGTATTAGAGGAAGCAGGCAGAAGTTATACCCTACTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160768.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATCCTGAAGAACAGACTTaGAAGCCGAGACACAACACC | + |
|
Preference number: 4 (lower is better) Translates to: CRYHVRYHSFSVMMYYGDPEEQT*KPRHNT Trigger: GGTGTTGTGTCTCGGCTTCCAAGTCTGTTCTTCAGG...ATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTACCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAAGAAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGATATGAAAAGGGCCAGTaGACAGTAGAAAACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EQKKGVILGGWRNGDDLGYEKGQ*TVENPG Trigger: TCCTGGGTTTTCTACTGTCCACTGGCCCTTTTCATA...TCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTTCTTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CCA 90 bp | TACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGCAGGAAAGTCTTGGTTTACCTaGACCCCATCCTGGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YHVRYHSFSVMMYYGDAGKSWFT*TPSWSF Trigger: AAAGGACCAGGATGGGGTCCAGGTAAACCAAGACTT...TCCTGCATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR TCA 90 bp | AAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTGGGTTAGACCATATATaGCCTGCTCATTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGVILGGWRNGDDLGESCGLDHI*PAHSLL Trigger: AAGCAGAGAATGAGCAGGTCATATATGGTCTAACCC...ACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR TCA 90 bp | TATACGTGCTTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCTTCTCAGAAGAAGAGTaGCCTGGGACAGTACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTCFLLMYIFLKYLGNRGFSEEE*PGTVPL Trigger: CAGCGGTACTGTCCCAGGTCACTCTTCTTCTGAGAA...GCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAAGCACGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR GCA 90 bp | GAGCAAAAGAAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGTGGTGTGCTTGGTGTaGTGCCCAGAAAATATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQKKGVILGGWRNGDDLGVVCLV*CPENIN Trigger: ATTAATATTTTCTGGGCAGCACACCAAGCACACCAC...TCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTTCTTTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGCCTGAAGAACAGACTTaGAAGCCGAGACACAACACC | + |
|
Preference number: 4 (lower is better) Translates to: FLLMYIFLKYLGNRGHLRPEEQT*KPRHNT Trigger: GGTGTTGTGTCTCGGCTTCCAAGTCTGTTCTTCAGG...CCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR CCA 90 bp | ATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGATACAGTCTAAGTCTTGGTTTACCTaGACCCCATCCTGGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MYIFLKYLGNRGHLRIQSKSWFT*TPSWSF Trigger: AAAGGACCAGGATGGGGTCCAGGTAAACCAAGACTT...AGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTAAAAGTAACACTCAGGCCAAGTCTTaGTTTACCTGGACCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ILGGWRNGDDLGESCKSNTQAKS*FTWTPS Trigger: GGATGGGGTCCAGGTAAACCAAGACTTGGCCTGAGT...GTTACTTTTACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTGCTGCCTTGGATCTTTaGTCCAGAAGAAAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KGVILGGWRNGDDLGESCAALDL*SRRKPM Trigger: CATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGC...ACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGCATACCCTGAGAAACTaGAACATTGTCTTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLMYIFLKYLGNRGHLRHTLRN*NIVLGS Trigger: GGAGCCCAAGACAATGTTTCAGTTTCTCAGGGTATG...CCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR TCA 90 bp | TACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGCAGGAATCATCCAAACGACCTaGTGGTTTCCCTTTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YHVRYHSFSVMMYYGDAGIIQTT*WFPFEN Trigger: ATTCTCAAAGGGAAACCATCAGGTCGTTTGGATGAT...TCCTGCATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR TCA 90 bp | GTGCACAGAATTTTACTTCAAGGCCAGGAAAATACAGCAGTAGGGTATAACTTCATCATCCAAACGACCTaGTGGTTTCCCTTTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHRILLQGQENTAVGYNFIIQTT*WFPFEN Trigger: ATTCTCAAAGGGAAACCATCAGGTCGTTTGGATGAT...GAAGTTATACCCTACTGCTGTATTTTCCTGGCCTTGAAGTAAAATTCTGTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160768.8 |
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| CDS-3UTR TCA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGGGGTTAGACCATATATaGCCTGCTCATTCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PYSLPQREMNIASMDMDRGLDHI*PAHSLL Trigger: AAGCAGAGAATGAGCAGGTCATATATGGTCTAACCC...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR GCA 90 bp | TACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGCAGGAGTGTGCTTGGTGTGCTaGCCAGAAAATATTAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHVRYHSFSVMMYYGDAGVCLVC*PENINL Trigger: GAGATTAATATTTTCTGGGCAGCACACCAAGCACAC...TCCTGCATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR GCA 90 bp | ATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTAAAAGTAACTTCAGAACTGTGGTGTaGTTGGTGTGCTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILGGWRNGDDLGESCKSNFRTVV*LVCCPE Trigger: TTCTGGGCAGCACACCAAGCACACCACAGTTCTGAA...GTTACTTTTACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR CCA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGGGAAGGCAGTTTCACTaGGCTCCATCATGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PYSLPQREMNIASMDMDRGRQFH*APSCKT Trigger: TGTTTTACATGATGGAGCCCAGTGAAACTGCCTTCC...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR CCA 90 bp | GAGCAAAAGAAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAACTGTCTCAGTGCTGTaGATAAGTTATAGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQKKGVILGGWRNGDDLGTVSVL*ISYSLQ Trigger: CTGAAGACTATAACTTATCCACAGCACTGAGACAGT...TCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTTCTTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR CCA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGTATGAAAAGGGCCAGTaGACAGTAGAAAACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PYSLPQREMNIASMDMDRYEKGQ*TVENPG Trigger: TCCTGGGTTTTCTACTGTCCACTGGCCCTTTTCATA...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR CCA 90 bp | TACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGCAGGAAAACTGCACGTTGAATaGCTCAAATGTACCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YHVRYHSFSVMMYYGDAGKLHVE*LKCTNG Trigger: CCCATTGGTACATTTGAGCCATTCAACGTGCAGTTT...TCCTGCATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
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| CDS-3UTR CCA 90 bp | ATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGATACAGTCTAGGACAGAAAACTTATaGCAGAATCCAGGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MYIFLKYLGNRGHLRIQSRTENL*QNPGVV Trigger: GACCACACCTGGATTCTGCCATAAGTTTTCTGTCCT...AGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
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| CDS-3UTR CCA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGGCTGCCTTGGATCTTTaGTCCAGAAGAAAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PYSLPQREMNIASMDMDRAALDL*SRRKPM Trigger: CATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGC...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGGTGGTGTGCTTGGTGTaGTGCCCAGAAAATATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PYSLPQREMNIASMDMDRVVCLV*CPENIN Trigger: ATTAATATTTTCTGGGCAGCACACCAAGCACACCAC...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | TGTAGGTACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATAAATGCCAGCATTACTaGAAACTGGAGGACAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CRYHVRYHSFSVMMYYGDKCQHY*KLEDSV Trigger: TACACTGTCCTCCAGTTTGCAGTAATGCTGGCATTT...ATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTACCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CCA 90 bp | ATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGATACAGTCTAAACTGCACGTTGAATaGCTCAAATGTACCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: MYIFLKYLGNRGHLRIQSKLHVE*LKCTNG Trigger: CCCATTGGTACATTTGAGCCATTCAACGTGCAGTTT...AGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGATCATCCAAACGACCTaGTGGTTTCCCTTTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLMYIFLKYLGNRGHLRIIQTT*WFPFEN Trigger: ATTCTCAAAGGGAAACCATCAGGTCGTTTGGATGAT...CCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCTCCTTATGTAATTGCAACATGCTAACCCAACATTGTAGAAATATGTACTCCAAGAGCCAGAGGTaGGTTGTGTTATGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MSSLCNCNMLTQHCRNMYSKSQR*VVLCFL Trigger: TAAGAAGCATAACACAACTCACCTCTGGCTCTTGGA...GTACATATTTCTACAATGTTGGGTTAGCATGTTGCAATTACATAAGGAGGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | ATGTCCTCCTTATGTAATTGCAACATGCTAACCCAACATTGTAGAAATATGTACCAGGAACTATACTGCTaGAAGACAGACTGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSSLCNCNMLTQHCRNMYQELYC*KTDCLS Trigger: ACTGAGACAGTCTGTCTTGCAGCAGTATAGTTCCTG...GTACATATTTCTACAATGTTGGGTTAGCATGTTGCAATTACATAAGGAGGACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | ATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTAAAAGTAACCAGGAACTATACTGCTaGAAGACAGACTGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGGWRNGDDLGESCKSNQELYC*KTDCLS Trigger: ACTGAGACAGTCTGTCTTGCAGCAGTATAGTTCCTG...GTTACTTTTACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGGTACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGACCTGCTCATTCTCTaGTTCAAATGTCCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CRYHVRYHSFSVMMYYGDDLLIL*FKCPKN Trigger: ATTTTTGGGACATTTGAAGCAGAGAATGAGCAGGTC...ATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTACCTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | TGTAGGTACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATCAGTACCGCTGTGTTTaGAAAGGTCTCTTCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRYHVRYHSFSVMMYYGDQYRCV*KGLFIK Trigger: TTTTATGAAGAGACCTTTGCAAACACAGCGGTACTG...ATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTACCTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | ATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTAAAAGTAACGTGTGCTTGGTGTGCTaGCCAGAAAATATTAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGGWRNGDDLGESCKSNVCLVC*PENINL Trigger: GAGATTAATATTTTCTGGGCAGCACACCAAGCACAC...GTTACTTTTACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGGTACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATAGACCATATATGACCTaGTCATTCTCTGCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CRYHVRYHSFSVMMYYGDRPYMT*SFSASN Trigger: ATTTGAAGCAGAGAATGAGCAGGTCATATATGGTCT...ATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTACCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR GCA 90 bp | CATGTCAGTGAATGCATAACACATTTATCTTCCTGGATTACCTCACTTAGAATTAAATGCCAGCATTACTaGAAACTGGAGGACAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HVSECITHLSSWITSLRIKCQHY*KLEDSV Trigger: TACACTGTCCTCCAGTTTGCAGTAATGCTGGCATTT...AATTCTAAGTGAGGTAATCCAGGAAGATAAATGTGTTATGCATTCACTGACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| 3UTR CAA 72 bp | ACGTGCTTTCTGTTAATGTATATTTTTCTCAAGTACTaGGGTAACAGAGGCCATCTCAGGATACAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCFLLMYIFLKY*GNRGHLRIQSF Trigger: AAAAGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAAGCACGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR GCA 90 bp | CATGTCAGTGAATGCATAACACATTTATCTTCCTGGATTACCTCACTTAGAATTGACCTGCTCATTCTCTaGTTCAAATGTCCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HVSECITHLSSWITSLRIDLLIL*FKCPKN Trigger: ATTTTTGGGACATTTGAAGCAGAGAATGAGCAGGTC...AATTCTAAGTGAGGTAATCCAGGAAGATAAATGTGTTATGCATTCACTGACATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGAGACCATATATGACCTaGTCATTCTCTGCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLMYIFLKYLGNRGHLRRPYMT*SFSASN Trigger: ATTTGAAGCAGAGAATGAGCAGGTCATATATGGTCT...CCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTAAAAGTAACGGTCTCTTCATAAAATaGCAGCATTACTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGGWRNGDDLGESCKSNGLFIK*QHYCKL Trigger: CAGTTTGCAGTAATGCTGGCATTTTATGAAGAGACC...GTTACTTTTACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTAAAAGTAACCAGTACCGCTGTGTTTaGAAAGGTCTCTTCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILGGWRNGDDLGESCKSNQYRCV*KGLFIK Trigger: TTTTATGAAGAGACCTTTGCAAACACAGCGGTACTG...GTTACTTTTACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATCACTCAGGCCAAGTCTaGGTTTACCTGGACCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TFPSRGELASKEGSDPRNHSGQV*VYLDPI Trigger: GATGGGGTCCAGGTAAACCAAGACTTGGCCTGAGTG...ATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCCCCTCCAGAGGAGAGTTGGCCTCCAAGGAGGGCTCTGACCCCAGGAATAGCTGCCTTGGATCTTaGGTCCAGAAGAAAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TFPSRGELASKEGSDPRNSCLGS*VQKKTN Trigger: ATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGCT...ATTCCTGGGGTCAGAGCCCTCCTTGGAGGCCAACTCTCCTCTGGAGGGGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGAGCATGCGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTAGAACTGTGGTGTGCTaGGTGTGCTGCCCAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PGEHAGLRSNSASWTRSIRTVVC*VCCPEN Trigger: ATTTTCTGGGCAGCACACCAAGCACACCACAGTTCT...AATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATGCTCTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCAGAAGAAACAGAGCTTCTAGGACAGGGGCTCTTCTGGCCTTCATCCACCTCTTCAACAGTTaGGAAGGCAGTTTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VSCRRNRASRTGALLAFIHLFNS*EGSFTG Trigger: CCCAGTGAAACTGCCTTCCAAACTGTTGAAGAGGTG...GATGAAGGCCAGAAGAGCCCCTGTCCTAGAAGCTCTGTTTCTTCTGCAGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTCACTCAGGCCAAGTCTaGGTTTACCTGGACCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGHSGQV*VYLDPI Trigger: GATGGGGTCCAGGTAAACCAAGACTTGGCCTGAGTG...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGAGCATGCGGGCCTCAGAAGCAACAGTGCTTCTTGGACAAGGTCCATTTCCATAGTAGCTGCCTaGGATCTTTGGTCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGEHAGLRSNSASWTRSISIVAA*DLWSRR Trigger: TCTTCTGGACCAAAGATCCAAGGCAGCTACTATGGA...AATGGACCTTGTCCAAGAAGCACTGTTGCTTCTGAGGCCCGCATGCTCTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTCACCTCTTCAACAGTTaGGAAGGCAGTTTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGHLFNS*EGSFTG Trigger: CCCAGTGAAACTGCCTTCCAAACTGTTGAAGAGGTG...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTGATGATGTACTATGGTGATGCAGGACGGAGAACTGACAGGACCGGTAGAGCCAGAGGTGAGTaGTGTTATGCTTCTTACGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSVMMYYGDAGRRTDRTGRARGE*CYASYA Trigger: GGCGTAAGAAGCATAACACAACTCACCTCTGGCTCT...ACCGGTCCTGTCAGTTCTCCGTCCTGCATCACCATAGTACATCATCACAGAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | ACCCGCAGGCACCATAGCACACCCAGGATCTTAAGATCACTAAGGAGAGTCTGCACAGTACCGCTGTGTTaGCAAAGGTCTCTTCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: TRRHHSTPRILRSLRRVCTVPLC*QRSLHK Trigger: TTTATGAAGAGACCTTTGCAAACACAGCGGTACTGT...GCAGACTCTCCTTAGTGATCTTAAGATCCTGGGTGTGCTATGGTGCCTGCGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS CCA 90 bp | AAACCCAGGAACTATACTGCTGCAAGACAGACTGTCTCAGTGCTGTaGATAAGTTATAGTCTTCAGAACTGTGGTGTGCTTGGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPRNYTAARQTVSVL*ISYSLQNCGVLGVL Trigger: CAGCACACCAAGCACACCACAGTTCTGAAGACTATAACTTATCCACAGCACTGAGACAGTCTGTCTTGCAGCAGTATAGTTCCTGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTCACTCAGGCCAAGTCTaGGTTTACCTGGACCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: KGVILGGWRNGDDLGESCHSGQV*VYLDPI Trigger: GATGGGGTCCAGGTAAACCAAGACTTGGCCTGAGTG...ACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS GCA 90 bp | GAAGATTCTCAGAAGAAGAGTGACCTGGGACAGTACCGCTGTGTTTaGAAAGGTCTCTTCATAAAATGCCAGCATTACTGCAAACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EDSQKKSDLGQYRCV*KGLFIKCQHYCKLE Trigger: CTCCAGTTTGCAGTAATGCTGGCATTTTATGAAGAGACCTTTGCAAACACAGCGGTACTGTCCCAGGTCACTCTTCTTCTGAGAATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGTAGGGTATAACTTCTGCCTGCTTCCTCTAATACAAACATTTGGGTACCACCTCTTCAACAGTTaGGAAGGCAGTTTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAVGYNFCLLPLIQTFGYHLFNS*EGSFTG Trigger: CCCAGTGAAACTGCCTTCCAAACTGTTGAAGAGGTG...GTACCCAAATGTTTGTATTAGAGGAAGCAGGCAGAAGTTATACCCTACTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160768.8 |
||
| CDS-3UTR CAA 90 bp | GCAACAGTGCTTCTTGGACAAGGTCCATTGTTCTGGATTTCATCCTTAGCCAGGGTAGAGGAGATTGAATaGAATATGAACAGCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: ATVLLGQGPLFWISSLARVEEIE*NMNSKH Trigger: GTGTTTGCTGTTCATATTCAATTCAATCTCCTCTAC...CCTGGCTAAGGATGAAATCCAGAACAATGGACCTTGTCCAAGAAGCACTGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | TACCATGTAAGATACCACTCTTTCTCTGTGATGATGTACTATGGTGATGCAGGATCCATAGTAGCTGCCTaGGATCTTTGGTCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YHVRYHSFSVMMYYGDAGSIVAA*DLWSRR Trigger: TCTTCTGGACCAAAGATCCAAGGCAGCTACTATGGA...TCCTGCATCACCATAGTACATCATCACAGAGAAAGAGTGGTATCTTACATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGCCTGATGGTTTCCCTTaGAGAATCCAGCTGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: PYSLPQREMNIASMDMDRPDGFP*RIQLMT Trigger: AGTCATCAGCTGGATTCTCAAAGGGAAACCATCAGG...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | ATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCATCTCAGGATACAGTCTTCCATAGTAGCTGCCTaGGATCTTTGGTCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MYIFLKYLGNRGHLRIQSSIVAA*DLWSRR Trigger: TCTTCTGGACCAAAGATCCAAGGCAGCTACTATGGA...AGACTGTATCCTGAGATGGCCTCTGTTACCCAAGTACTTGAGAAAAATATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CAA 90 bp | TATACGTGCTTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCCACCTCTTCAACAGTTaGGAAGGCAGTTTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YTCFLLMYIFLKYLGNRGHLFNS*EGSFTG Trigger: CCCAGTGAAACTGCCTTCCAAACTGTTGAAGAGGTG...GCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAAGCACGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCTCCTTATGTAATTGCAACATGCTAACCCAACATTGTAGAAATATGTACAGAACTGTGGTGTGCTaGGTGTGCTGCCCAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: MSSLCNCNMLTQHCRNMYRTVVC*VCCPEN Trigger: ATTTTCTGGGCAGCACACCAAGCACACCACAGTTCT...GTACATATTTCTACAATGTTGGGTTAGCATGTTGCAATTACATAAGGAGGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | CATGTCAGTGAATGCATAACACATTTATCTTCCTGGATTACCTCACTTAGAATTAGAACTGTGGTGTGCTaGGTGTGCTGCCCAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HVSECITHLSSWITSLRIRTVVC*VCCPEN Trigger: ATTTTCTGGGCAGCACACCAAGCACACCACAGTTCT...AATTCTAAGTGAGGTAATCCAGGAAGATAAATGTGTTATGCATTCACTGACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGTGATTTTAGGTGGATGGAGAAATGGTGATGATCTAGGAGAATCTTGTACAGTACCGCTGTGTTaGCAAAGGTCTCTTCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: KGVILGGWRNGDDLGESCTVPLC*QRSLHK Trigger: TTTATGAAGAGACCTTTGCAAACACAGCGGTACTGT...ACAAGATTCTCCTAGATCATCACCATTTCTCCATCCACCTAAAATCACACCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CAA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGAGCTGCCTTGGATCTTaGGTCCAGAAGAAAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PYSLPQREMNIASMDMDRSCLGS*VQKKTN Trigger: ATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGCT...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGACAGTACCGCTGTGTTaGCAAAGGTCTCTTCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: PYSLPQREMNIASMDMDRTVPLC*QRSLHK Trigger: TTTATGAAGAGACCTTTGCAAACACAGCGGTACTGT...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS TCA 90 bp | AAAATCTCAAATGCAAAAGATAAAGATGGAATAAGAGGCTTTAAGTaGCCAAATCTGTGCAGGGTTAGGAACAACAGGCACCGGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KISNAKDKDGIRGFK*PNLCRVRNNRHRKV Trigger: AACTTTCCGGTGCCTGTTGTTCCTAACCCTGCACAGATTTGGTCACTTAAAGCCTCTTATTCCATCTTTATCTTTTGCATTTGAGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS GCA 90 bp | AATGGCTCAAATGTACCAATGGGATGGGTTAGACCATATATGACCTaGTCATTCTCTGCTTCAAATGTCCCAAAAATTCTATCCCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: NGSNVPMGWVRPYMT*SFSASNVPKILSQI Trigger: TATTTGGGATAGAATTTTTGGGACATTTGAAGCAGAGAATGAGCAGGTCATATATGGTCTAACCCATCCCATTGGTACATTTGAGCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS-3UTR CAA 90 bp | TATACGTGCTTTCTGTTAATGTATATTTTTCTCAAGTACTTGGGTAACAGAGGCAGCTGCCTTGGATCTTaGGTCCAGAAGAAAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: YTCFLLMYIFLKYLGNRGSCLGS*VQKKTN Trigger: ATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGCT...GCCTCTGTTACCCAAGTACTTGAGAAAAATATACATTAACAGAAAGCACGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS-3UTR CAA 90 bp | CCTTATTCATTGCCACAGAGAGAAATGAATATAGCCTCAATGGATATGGATAGGGTAGAGGAGATTGAATaGAATATGAACAGCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: PYSLPQREMNIASMDMDRVEEIE*NMNSKH Trigger: GTGTTTGCTGTTCATATTCAATTCAATCTCCTCTAC...CCTATCCATATCCATTGAGGCTATATTCATTTCTCTCTGTGGCAATGAATAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049874.14 |
||
| CDS-3UTR CAA 90 bp | CATGTCAGTGAATGCATAACACATTTATCTTCCTGGATTACCTCACTTAGAATTGTAGAGGAGATTGAATaGAATATGAACAGCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HVSECITHLSSWITSLRIVEEIE*NMNSKH Trigger: GTGTTTGCTGTTCATATTCAATTCAATCTCCTCTAC...AATTCTAAGTGAGGTAATCCAGGAAGATAAATGTGTTATGCATTCACTGACATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159998.8 |
||
| CDS CAA 90 bp | AGGGTTAGGAACAACAGGCACCGGAAAGTTTCCATAGTAGCTGCCTaGGATCTTTGGTCCAGAAGAAAACCAATGGACGTCAAGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RVRNNRHRKVSIVAA*DLWSRRKPMDVKVR Trigger: CCTGACCTTGACGTCCATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGCTACTATGGAAACTTTCCGGTGCCTGTTGTTCCTAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS GCA 72 bp | CAGAAGAAGAGTGACCTGGGACAGTACCGCTGTGTTTaGAAAGGTCTCTTCATAAAATGCCAGCATTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QKKSDLGQYRCV*KGLFIKCQHYC Trigger: GCAGTAATGCTGGCATTTTATGAAGAGACCTTTGCAAACACAGCGGTACTGTCCCAGGTCACTCTTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS CAA 72 bp | AACAACAGGCACCGGAAAGTTTCCATAGTAGCTGCCTaGGATCTTTGGTCCAGAAGAAAACCAATGGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: NNRHRKVSIVAA*DLWSRRKPMDV Trigger: GACGTCCATTGGTTTTCTTCTGGACCAAAGATCCAAGGCAGCTACTATGGAAACTTTCCGGTGCCTGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS GCA 72 bp | GTTATAGTCTTCAGAACTGTGGTGTGCTTGGTGTGCTaGCCAGAAAATATTAATCTCATGAGCCATGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VIVFRTVVCLVC*PENINLMSHAV Trigger: CACCGCATGGCTCATGAGATTAATATTTTCTGGGCAGCACACCAAGCACACCACAGTTCTGAAGACTATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS CCA 72 bp | CCCCATCCTGGTCCTTTAAATAGGACAGAAAACTTATaGCAGAATCCAGGTGTGGTCCAGAATGTAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PHPGPLNRTENL*QNPGVVQNVVH Trigger: ATGGACTACATTCTGGACCACACCTGGATTCTGCCATAAGTTTTCTGTCCTATTTAAAGGACCAGGATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS CAA 72 bp | GTGAGAGCATCATCCAAACGACCTGATGGTTTCCCTTaGAGAATCCAGCTGATGACTAGTTCAAGCAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: VRASSKRPDGFP*RIQLMTSSSRI Trigger: GATTCTGCTTGAACTAGTCATCAGCTGGATTCTCAAAGGGAAACCATCAGGTCGTTTGGATGATGCTCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 ENSMUST00000160768.8 |
||
| CDS CCA 72 bp | AACTATACTGCTGCAAGACAGACTGTCTCAGTGCTGTaGATAAGTTATAGTCTTCAGAACTGTGGTGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: NYTAARQTVSVL*ISYSLQNCGVL Trigger: AAGCACACCACAGTTCTGAAGACTATAACTTATCCACAGCACTGAGACAGTCTGTCTTGCAGCAGTATAGTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS TCA 72 bp | GCTCAAATGTACCAATGGGATGGGTTAGACCATATATaGCCTGCTCATTCTCTGCTTCAAATGTCCCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AQMYQWDGLDHI*PAHSLLQMSQK Trigger: TTTTTGGGACATTTGAAGCAGAGAATGAGCAGGTCATATATGGTCTAACCCATCCCATTGGTACATTTGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS CAA 90 bp | GATATAGATGTGAGAGCATCATCCAAACGACCTGATGGTTTCCCTTaGAGAATCCAGCTGATGACTAGTTCAAGCAGAATCAAGAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: DIDVRASSKRPDGFP*RIQLMTSSSRIKKI Trigger: TATCTTCTTGATTCTGCTTGAACTAGTCATCAGCTGGATTCTCAAAGGGAAACCATCAGGTCGTTTGGATGATGCTCTCACATCTATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 ENSMUST00000160768.8 |
||
| CDS TCA 72 bp | AATGCAAAAGATAAAGATGGAATAAGAGGCTTTAAGTaGCCAAATCTGTGCAGGGTTAGGAACAACAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NAKDKDGIRGFK*PNLCRVRNNRH Trigger: GTGCCTGTTGTTCCTAACCCTGCACAGATTTGGTCACTTAAAGCCTCTTATTCCATCTTTATCTTTTGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||
| CDS GCA 72 bp | AATGTACCAATGGGATGGGTTAGACCATATATGACCTaGTCATTCTCTGCTTCAAATGTCCCAAAAATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: NVPMGWVRPYMT*SFSASNVPKIL Trigger: TAGAATTTTTGGGACATTTGAAGCAGAGAATGAGCAGGTCATATATGGTCTAACCCATCCCATTGGTACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049874.14 ENSMUST00000159998.8 ENSMUST00000160390.2 |
||