Pregenerated sensors for AGMAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040706Ensembl transcript IDs: ENSMUST00000038161.5
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGTTTGGGTTAGTGTCCCAGTTGTCCTTGTTTGCAGCCAGTGGTaGCATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: AVWVSVPVVLVCSQW*HFTESFLWSLHCWL Trigger: GAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGTTAGTGTCCCAGTTGTCCTTGTTTGCAGCCAGTGGTGACATTTCACAGGCTTTCTTTGGTCCTTaGACTGCTGGCTCACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: FGLVSQLSLFAASGDISQAFFGP*TAGSQV Trigger: GACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGC...CTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| 3UTR-3UTR CAA 90 bp | AATGTTAGGAGGGAAGGAAGGAGACACGAGCTGTTTGGGTTAGTGTCCCAGTTGAGCTTTCTTTGGTCCTaGCACTGCTGGCTCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: NVRREGRRHELFGLVSQLSFLWS*HCWLTS Trigger: ACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCT...CAACTGGGACACTAACCCAAACAGCTCGTGTCTCCTTCCTTCCCTCCTAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| 3UTR GCA 72 bp | AGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTaGACTGCTGGCTCACAAGTCCTTGAGGCTCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: SGDISQKAFFGP*TAGSQVLEALS Trigger: TGACAGAGCCTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| 3UTR TCA 72 bp | GTTAGTGTCCCAGTTGTCCTTGTTTGCAGCCAGTGGTaGCATTTCACAGAAAGCTTTCTTTGGTCCTTGCAC | + |
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Preference number: 3 (lower is better) Translates to: VSVPVVLVCSQW*HFTESFLWSLH Trigger: GTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCAGCCGCGGGCCCAGCTaGACCTCAGCAGCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AASGDISQKAFFGPCTAGSRGPS*TSAASA Trigger: TGCTGAGGCTGCTGAGGTCCAGCTGGGCCCGCGGCT...GCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR TCA 90 bp | GCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCCACCGGCTGTACCGGTaGCTCAGAGCTGGGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: AASGDISQKAFFGPCTAGHRLYR*LRAGGL Trigger: CAGTCCCCCAGCTCTGAGTCACCGGTACAGCCGGTG...GCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR GCA 90 bp | CCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACCCCTCGGGGGAGGACTaGAGGGGCAGGCGCATCATG | + |
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Preference number: 4 (lower is better) Translates to: PVVTFHRKLSLVLALLAHPSGED*RGRRIM Trigger: CATGATGCGCCTGCCCCTGCAGTCCTCCCCCGAGGG...GTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | AATGTTAGGAGGGAAGGAAGGAGACACGAGCTGTTTGGGTTAGTGTCCCAGTTGGAGGCACCTGAAGCCTaGCGGATCCCAGGGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: NVRREGRRHELFGLVSQLEAPEA*RIPGHP Trigger: TGGGTGCCCTGGGATCCGCCAGGCTTCAGGTGCCTC...CAACTGGGACACTAACCCAAACAGCTCGTGTCTCCTTCCTTCCCTCCTAACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR TCA 90 bp | CAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCCAGAGGCACACCGATaGAAGCAGCGTCCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QPVVTFHRKLSLVLALLAPEAHR*KQRPAP Trigger: AGGGGCTGGACGCTGCTTTCATCGGTGTGCCTCTGG...AGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | GTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCCTGAGGGACGCCAAGTaGCCACCCCAGACCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VTFHRKLSLVLALLAHKSLRDAK*PPQTPS Trigger: GCTTGGGGTCTGGGGTGGCCACTTGGCGTCCCTCAG...GGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCCGGTGACTCAGAGCTaGGGGACTGGTGGTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GDISQKAFFGPCTAGSQVPVTQS*GTGGVG Trigger: CCCCACACCACCAGTCCCCCAGCTCTGAGTCACCGG...GACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | CCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACGGGGCAGGCGCATCATaGAACAGACACCCACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PVVTFHRKLSLVLALLAHGAGAS*NRHPPP Trigger: TGGGGGTGGGTGTCTGTTCCATGATGCGCCTGCCCC...GTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR TCA 90 bp | AGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAACTCCCGTGCTGGGGTTaGCAGCCCCCAGCATCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SGDISQKAFFGPCTAGSQLPCWG*QPPASV Trigger: CACTGATGCTGGGGGCTGTCAACCCCAGCACGGGAG...TTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | GGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCGCAACCCTGAGGGACTaGAAGGGGAGAGCTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GDISQKAFFGPCTAGSQVATLRD*KGRAPV Trigger: CACGGGAGCTCTCCCCTTCCAGTCCCTCAGGGTTGC...GACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | CCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAGGGATCCAGAGTCCTaGAGGAGCCCCGGATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: PVVTFHRKLSLVLALLAHRDPES*RSPGCL Trigger: TAGGCATCCGGGGCTCCTCCAGGACTCTGGATCCCT...GTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR GCA 90 bp | GGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCGTGTGGGCACCCACATaGACTAAACCCACCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GDISQKAFFGPCTAGSQVVWAPT*TKPTGP Trigger: TGGCCCGGTGGGTTTAGTGCATGTGGGTGCCCACAC...GACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR GCA 90 bp | CTGTTTGGGTTAGTGTCCCAGTTGTCCTTGTTTGCAGCCAGTGGTGACATTTCACCAAGGTCAGAGGAATaGAGCCCGCAGCGAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LFGLVSQLSLFAASGDISPRSEE*SPQRGH Trigger: ATGTCCTCGCTGCGGGCTGCATTCCTCTGACCTTGG...TGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR GCA 90 bp | ATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGAAACCCACCGGGCCATaGTCCTTTGCCACGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ISQKAFFGPCTAGSQVLEKPTGP*SFATAC Trigger: GCAAGCCGTGGCAAAGGAGCATGGCCCGGTGGGTTT...CTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR GCA 90 bp | CTGTTTGGGTTAGTGTCCCAGTTGTCCTTGTTTGCAGCCAGTGGTGACATTTCATGGAGGAGCCCCGGATaGCTATCTGTACCACTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LFGLVSQLSLFAASGDISWRSPG*LSVPLA Trigger: AGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCA...TGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | TGTTTGCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGTTGCCCCGGGCCGGTTaGAAGTCCCAGTATCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: CLQPVVTFHRKLSLVLALLPRAG*KSQYPE Trigger: CTCTGGATACTGGGACTTCCAACCGGCCCGGGGCAA...CAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCCGTGGTGTTGGTGTaGGCACCCACATGCACTAAA | + |
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Preference number: 4 (lower is better) Translates to: AASGDISQKAFFGPCTAGSVVLV*APTCTK Trigger: TTTAGTGCATGTGGGTGCCCACACCAACACCACGGA...GCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | CCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACGTTTGTCCGTGGTGTTaGTGTGGGCACCCACATGCA | + |
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Preference number: 4 (lower is better) Translates to: PVVTFHRKLSLVLALLAHVCPWC*CGHPHA Trigger: TGCATGTGGGTGCCCACACCAACACCACGGACAAAC...GTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | AGTTGTCCTTGTTTGCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCGAGCTGGGGGACTGGTaGTGTGGGGTATCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SCPCLQPVVTFHRKLSLVELGDW*CGVSEA Trigger: TGCCTCAGATACCCCACACCACCAGTCCCCCAGCTC...GACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | ATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGTCAGAGCTGGGGGACTaGTGGTGTGGGGTATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ISQKAFFGPCTAGSQVLESELGD*WCGVSE Trigger: CTCAGATACCCCACACCACCAGTCCCCCAGCTCTGA...CTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | TGTTTGCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCGGTGTCCCTGTTCCTaGGGCATAGGCAGGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: CLQPVVTFHRKLSLVLALRCPCS*GIGRIQ Trigger: TTGGATCCTGCCTATGCCCCAGGAACAGGGACACCG...CAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| 3UTR CAA 72 bp | GGAAGGAGACACGAGCTGTTTGGGTTAGTGTCCCAGTaGTCCTTGTTTGCAGCCAGTGGTGACATTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GRRHELFGLVSQ*SLFAASGDISQ Trigger: CTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAACAGCTCGTGTCTCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| 3UTR CAA 72 bp | TTGCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTaGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LQPVVTFHRKLS*VLALLAHKSLR Trigger: CCTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR TCA 90 bp | TCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGGCTGCAGTATGGGATATGTaGTTGTTTGGTCTCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SQKAFFGPCTAGSQVLEAAVWDM*LFGLHP Trigger: TGGGTGGAGACCAAACAATCACATATCCCATACTGC...AGCCTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR TCA 90 bp | TCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGGCTCATCTATGGCAAAGCTaGTATAAAGAGGCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SQKAFFGPCTAGSQVLEAHLWQS*YKEACP Trigger: GGGGCAAGCCTCTTTATATCAGCTTTGCCATAGATG...AGCCTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR GCA 90 bp | AGTTGTCCTTGTTTGCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCGTGACTCCTCCCGGATaGGACAGGGTCCAAATCTTG | + |
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Preference number: 4 (lower is better) Translates to: SCPCLQPVVTFHRKLSLVVTPPG*DRVQIL Trigger: CAAGATTTGGACCCTGTCGCATCCGGGAGGAGTCAC...GACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| 3UTR CAA 72 bp | AGACACGAGCTGTTTGGGTTAGTGTCCCAGTTGTCCTaGTTTGCAGCCAGTGGTGACATTTCACAGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: RHELFGLVSQLS*FAASGDISQKA Trigger: AGCTTTCTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAACAGCTCGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR GCA 90 bp | TCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGGCTTCCTTTGCCACGGCTTaGAGTATGGGATATGTGATT | + |
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Preference number: 4 (lower is better) Translates to: SQKAFFGPCTAGSQVLEASFATA*SMGYVI Trigger: AATCACATATCCCATACTGCAAGCCGTGGCAAAGGA...AGCCTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CCA 90 bp | TGTTTGCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGGGATATGTGATTGTTTaGTCTCCACCCAAGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: CLQPVVTFHRKLSLVLALGYVIV*SPPKVR Trigger: TCTGACCTTGGGTGGAGACCAAACAATCACATATCC...CAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 90 bp | CCAGAGTCCTGGAGGAGCCCCGGATGCCTATCTGTACCACTCGCTTaGTGTCCAGCAGTCCCTCATCCACACTTCGGCGGAAAGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PESWRSPGCLSVPLA*CPAVPHPHFGGKVS Trigger: GGACACCTTTCCGCCGAAGTGTGGATGAGGGACTGCTGGACAGCAAGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCAGGACTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 90 bp | CACGGAAGCCCTGGCTCCTACTGTATCTGTAGGGATCCAGAGTCCTaGAGGAGCCCCGGATGCCTATCTGTACCACTCGCTTGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: HGSPGSYCICRDPES*RSPGCLSVPLACCP Trigger: TGGACAGCAAGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCAGGACTCTGGATCCCTACAGATACAGTAGGAGCCAGGGCTTCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 90 bp | TCCTACTGTATCTGTAGGGATCCAGAGTCCTGGAGGAGCCCCGGATaGCTATCTGTACCACTCGCTTGCTGTCCAGCAGTCCCTCATCCA | + |
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Preference number: 5 (lower is better) Translates to: SYCICRDPESWRSPG*LSVPLACCPAVPHP Trigger: TGGATGAGGGACTGCTGGACAGCAAGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCAGGACTCTGGATCCCTACAGATACAGTAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 90 bp | AGCCTGACTAGGGGTGAGCCCCGCGATTTCCGGTGTCCCTGTTCCTaGGGCATAGGCAGGATCCAAGGCATCTATGGCAAAGCTGATATA | + |
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Preference number: 5 (lower is better) Translates to: SLTRGEPRDFRCPCS*GIGRIQGIYGKADI Trigger: TATATCAGCTTTGCCATAGATGCCTTGGATCCTGCCTATGCCCCAGGAACAGGGACACCGGAAATCGCGGGGCTCACCCCTAGTCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 90 bp | GTGGTGTTGGTGTGGGCACCCACATGCACTAAACCCACCGGGCCATaGTCCTTTGCCACGGCTTGCAGTATGGGATATGTGATTGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: VVLVWAPTCTKPTGP*SFATACSMGYVIVW Trigger: CCAAACAATCACATATCCCATACTGCAAGCCGTGGCAAAGGAGCATGGCCCGGTGGGTTTAGTGCATGTGGGTGCCCACACCAACACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 90 bp | CCCACATGCACTAAACCCACCGGGCCATGCTCCTTTGCCACGGCTTaGAGTATGGGATATGTGATTGTTTGGTCTCCACCCAAGGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PTCTKPTGPCSFATA*SMGYVIVWSPPKVR Trigger: TCTGACCTTGGGTGGAGACCAAACAATCACATATCCCATACTGCAAGCCGTGGCAAAGGAGCATGGCCCGGTGGGTTTAGTGCATGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CAA 90 bp | CTGTTTGGGTTAGTGTCCCAGTTGTCCTTGTTTGCAGCCAGTGGTGACATTTCACTTGCCCCGGGCCGGTaGGAAGTCCCAGTATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LFGLVSQLSLFAASGDISLAPGR*EVPVSR Trigger: TCTGGATACTGGGACTTCCAACCGGCCCGGGGCAAG...TGAAATGTCACCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CAA 90 bp | ATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGGCTCCCGTGCTGGGGTaGACAGCCCCCAGCATCAGT | + |
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Preference number: 5 (lower is better) Translates to: ISQKAFFGPCTAGSQVLEAPVLG*TAPSIS Trigger: ACTGATGCTGGGGGCTGTCAACCCCAGCACGGGAGC...CTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CAA 90 bp | GGTGACATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCAGATTGACGTTCACATaGCCTAGGTCTGCAACCCTG | + |
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Preference number: 5 (lower is better) Translates to: GDISQKAFFGPCTAGSQVRLTFT*PRSATL Trigger: CAGGGTTGCAGACCTAGGCAATGTGAACGTCAATCT...GACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAATGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CAA 90 bp | ATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGCAGACAGTTGTCACTTaGGGGAGAGCACACAGCATC | + |
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Preference number: 5 (lower is better) Translates to: ISQKAFFGPCTAGSQVLEQTVVT*GRAHSI Trigger: GATGCTGTGTGCTCTCCCCAAAGTGACAACTGTCTG...CTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CAA 90 bp | ATTTCACAGAAAGCTTTCTTTGGTCCTTGCACTGCTGGCTCACAAGTCCTTGAGGGGATATGTGATTGTTaGGTCTCCACCCAAGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ISQKAFFGPCTAGSQVLEGICDC*VSTQGQ Trigger: CTGACCTTGGGTGGAGACCAAACAATCACATATCCC...CTCAAGGACTTGTGAGCCAGCAGTGCAAGGACCAAAGAAAGCTTTCTGTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS-3UTR CAA 90 bp | AGTTGTCCTTGTTTGCAGCCAGTGGTGACATTTCACAGAAAGCTTTCTTTGGTCCTCCTTTGCCACGGCTaGCAGTATGGGATATGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SCPCLQPVVTFHRKLSLVLLCHG*QYGICD Trigger: ATCACATATCCCATACTGCAAGCCGTGGCAAAGGAG...GACCAAAGAAAGCTTTCTGTGAAATGTCACCACTGGCTGCAAACAAGGACAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 72 bp | GACTGGTGGTGTGGGGTATCTGAGGCACCTGAAGCCTaGCGGATCCCAGGGCACCCAGGACGAAAGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: DWWCGVSEAPEA*RIPGHPGRKSP Trigger: GGGGCTCTTTCGTCCTGGGTGCCCTGGGATCCGCCAGGCTTCAGGTGCCTCAGATACCCCACACCACCAGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 72 bp | CCCACCGGCTGTACCGGTGACTCAGAGCTGGGGGACTaGTGGTGTGGGGTATCTGAGGCACCTGAAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PTGCTGDSELGD*WCGVSEAPEAW Trigger: CCAGGCTTCAGGTGCCTCAGATACCCCACACCACCAGTCCCCCAGCTCTGAGTCACCGGTACAGCCGGTGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CAA 90 bp | GACTCCTCCCGGATGCGACAGGGTCCAAATCTTGCCCCGGGCCGGTaGGAAGTCCCAGTATCCAGAGGCACACCGATGAAAGCAGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: DSSRMRQGPNLAPGR*EVPVSRGTPMKAAS Trigger: GGACGCTGCTTTCATCGGTGTGCCTCTGGATACTGGGACTTCCAACCGGCCCGGGGCAAGATTTGGACCCTGTCGCATCCGGGAGGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS TCA 72 bp | AGCTCCCGTGCTGGGGTTGACAGCCCCCAGCATCAGTaGCTCCTCCCGGATGCGACAGGGTCCAAATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSRAGVDSPQHQ*LLPDATGSKSC Trigger: GCAAGATTTGGACCCTGTCGCATCCGGGAGGAGTCACTGATGCTGGGGGCTGTCAACCCCAGCACGGGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CAA 72 bp | CTGGAGGAGCCCCGGATGCCTATCTGTACCACTCGCTaGCTGTCCAGCAGTCCCTCATCCACACTTCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: LEEPRMPICTTR*LSSSPSSTLRR Trigger: CCGCCGAAGTGTGGATGAGGGACTGCTGGACAGCAAGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 72 bp | CGAGGTTTGTCCGTGGTGTTGGTGTGGGCACCCACATaGACTAAACCCACCGGGCCATGCTCCTTTGCCACG | + |
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Preference number: 6 (lower is better) Translates to: RGLSVVLVWAPT*TKPTGPCSFAT Trigger: CGTGGCAAAGGAGCATGGCCCGGTGGGTTTAGTGCATGTGGGTGCCCACACCAACACCACGGACAAACCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 72 bp | TGGAGGAGCCCCGGATGCCTATCTGTACCACTCGCTTaGTGTCCAGCAGTCCCTCATCCACACTTCGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: WRSPGCLSVPLA*CPAVPHPHFGG Trigger: TCCGCCGAAGTGTGGATGAGGGACTGCTGGACAGCAAGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 72 bp | ACGTTCACATTGCCTAGGTCTGCAACCCTGAGGGACTaGAAGGGGAGAGCTCCCGTGCTGGGGTTGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: TFTLPRSATLRD*KGRAPVLGLTA Trigger: GGCTGTCAACCCCAGCACGGGAGCTCTCCCCTTCCAGTCCCTCAGGGTTGCAGACCTAGGCAATGTGAACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 72 bp | ACCTTCTCCTCCCGAGGTTTGTCCGTGGTGTTGGTGTaGGCACCCACATGCACTAAACCCACCGGGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: TFSSRGLSVVLV*APTCTKPTGPC Trigger: GCATGGCCCGGTGGGTTTAGTGCATGTGGGTGCCCACACCAACACCACGGACAAACCTCGGGAGGAGAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CAA 72 bp | TCAGTGACTCCTCCCGGATGCGACAGGGTCCAAATCTaGCCCCGGGCCGGTTGGAAGTCCCAGTATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SVTPPGCDRVQI*PRAGWKSQYPE Trigger: CTCTGGATACTGGGACTTCCAACCGGCCCGGGGCAAGATTTGGACCCTGTCGCATCCGGGAGGAGTCACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CAA 90 bp | TCCAGAGTCCTGGAGGAGCCCCGGATGCCTATCTGTACCACTCGCTaGCTGTCCAGCAGTCCCTCATCCACACTTCGGCGGAAAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRVLEEPRMPICTTR*LSSSPSSTLRRKGV Trigger: GACACCTTTCCGCCGAAGTGTGGATGAGGGACTGCTGGACAGCAAGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCAGGACTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CAA 72 bp | CGGATGCGACAGGGTCCAAATCTTGCCCCGGGCCGGTaGGAAGTCCCAGTATCCAGAGGCACACCGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: RMRQGPNLAPGR*EVPVSRGTPMK Trigger: TTTCATCGGTGTGCCTCTGGATACTGGGACTTCCAACCGGCCCGGGGCAAGATTTGGACCCTGTCGCATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CAA 72 bp | GACTTCCACAAGATCGCAGCCCACCACATTCAGGCCTaGGCAGCCCCGGATGATCTCCAGAGCCTGACTAGG | + |
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Preference number: 6 (lower is better) Translates to: DFHKIAAHHIQA*AAPDDLQSLTR Trigger: CCTAGTCAGGCTCTGGAGATCATCCGGGGCTGCCAAGGCCTGAATGTGGTGGGCTGCGATCTTGTGGAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 72 bp | ATCTGTAGGGATCCAGAGTCCTGGAGGAGCCCCGGATaGCTATCTGTACCACTCGCTTGCTGTCCAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ICRDPESWRSPG*LSVPLACCPAV Trigger: GACTGCTGGACAGCAAGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCAGGACTCTGGATCCCTACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 72 bp | CCTGGCTCCTACTGTATCTGTAGGGATCCAGAGTCCTaGAGGAGCCCCGGATGCCTATCTGTACCACTCGCT | + |
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Preference number: 6 (lower is better) Translates to: PGSYCICRDPES*RSPGCLSVPLA Trigger: AGCGAGTGGTACAGATAGGCATCCGGGGCTCCTCCAGGACTCTGGATCCCTACAGATACAGTAGGAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS CCA 72 bp | TCCGATGGTAGACCTTCTCCTCCCGAGGTTTGTCCGTaGTGTTGGTGTGGGCACCCACATGCACTAAACCCA | + |
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Preference number: 6 (lower is better) Translates to: SDGRPSPPEVCP*CWCGHPHALNP Trigger: TGGGTTTAGTGCATGTGGGTGCCCACACCAACACCACGGACAAACCTCGGGAGGAGAAGGTCTACCATCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS GCA 72 bp | ACTAAACCCACCGGGCCATGCTCCTTTGCCACGGCTTaGAGTATGGGATATGTGATTGTTTGGTCTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: TKPTGPCSFATA*SMGYVIVWSPP Trigger: GGGTGGAGACCAAACAATCACATATCCCATACTGCAAGCCGTGGCAAAGGAGCATGGCCCGGTGGGTTTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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| CDS TCA 72 bp | CATGCTCCTTTGCCACGGCTTGCAGTATGGGATATGTaGTTGTTTGGTCTCCACCCAAGGTCAGAGGAATGC | + |
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Preference number: 6 (lower is better) Translates to: HAPLPRLAVWDM*LFGLHPRSEEC Trigger: GCATTCCTCTGACCTTGGGTGGAGACCAAACAATCACATATCCCATACTGCAAGCCGTGGCAAAGGAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038161.5 |
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