Pregenerated sensors for AGFG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029722Ensembl transcript IDs: ENSMUST00000031736.16, ENSMUST00000100544.11, ENSMUST00000151839.2, ENSMUST00000198657.2
Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTaGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTCCCCACA | + |
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Preference number: 1 (lower is better) Translates to: LLPSGRTAAALEGWV*RKLRLGLCLASLPT Trigger: TGTGGGGAGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 90 bp | CGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTaGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: RALLPSGRTAAALEG*VWRKLRLGLCLASL Trigger: GAGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 90 bp | CAGCTAGGAAGAACTGAGGTGGAGAGAAGTGGGTGTGGCCGAGCCTaGCAAACAAAAACACTAGACACCAGAAGCTCCGCAGTCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: QLGRTEVERSGCGRA*QTKTLDTRSSAVPG Trigger: CCCTGGGACTGCGGAGCTTCTGGTGTCTAGTGTTTTTGTTTGCCAGGCTCGGCCACACCCACTTCTCTCCACCTCAGTTCTTCCTAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 90 bp | TATTGTGGAAAGCGTCAGGACACTTGGTTGTCCTCCCCTGAGCCCTaGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCCT | + |
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Preference number: 1 (lower is better) Translates to: YCGKRQDTWLSSPEP*GSGFDYPGTGRSYP Trigger: AGGGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGACAACCAAGTGTCCTGACGCTTTCCACAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR GCA 90 bp | GTGGCTTTCAACACCAGGCCTCATCTTTACCCTACATTCGAGCTTTaGTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: VAFNTRPHLYPTFEL*FHLGGQRQLWKVGC Trigger: ACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGTAGGGTAAAGATGAGGCCTGGTGTTGAAAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 90 bp | ACACCAGGCCTCATCTTTACCCTACATTCGAGCTTTGCTTCCATCTaGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: TPGLIFTLHSSFASI*EDSGSFGRLGVEEV Trigger: AACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGTAGGGTAAAGATGAGGCCTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR GCA 90 bp | AGGAGTTACCCTATTCTTCAAGTTCCCAGGAGGAGTCTAGACAAGTaGTCTACCACTGAACTACATCCTGAGTTCTCTGTTTTTACTTTT | + |
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Preference number: 1 (lower is better) Translates to: RSYPILQVPRRSLDK*STTELHPEFSVFTF Trigger: AAAAGTAAAAACAGAGAACTCAGGATGTAGTTCAGTGGTAGAGCACTTGTCTAGACTCCTCCTGGGAACTTGAAGAATAGGGTAACTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGGAAGAGGAAGCCCCTaGGCGGCAGACCAGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCGRGSP*AADQEA Trigger: AGCCTCCTGGTCTGCCGCCCAGGGGCTTCCTCTTCC...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CAA 90 bp | TCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTaGCGGCTGGGGCTGTGCCTAGCTTCTCTCCCCACAGGCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SGRTAAALEGWVWRK*RLGLCLASLPTGQE Trigger: CTCCTGGCCTGTGGGGAGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTGCAGCTTTGGAAGGTTaGGTGTGGAGGAAGTTGCGG | + |
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Preference number: 2 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSAALEG*VWRKLR Trigger: CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGC...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CAA 90 bp | CCCTACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTaGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: PYIRALLPSGRTAAA*EGWVWRKLRLGLCL Trigger: TAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR GCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTTCAGACCCACAGAAATaGCCCACAGGCAAATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPSDPQK*PTGKWS Trigger: TGACCATTTGCCTGTGGGGCATTTCTGTGGGTCTGA...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTTATCTTTGCTCCTTGTaGGCTTCTTCCTGGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCYLCSL*ASSWVG Trigger: ACCTACCCAGGAAGAAGCCCACAAGGAGCAAAGATA...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CAA 90 bp | GTCAGGACACTTGGTTGTCCTCCCCTGAGCCCTGGGGCTCCGGGTTaGATTATCCAGGCACAGGCAGGAGTTACCCTATTCTTCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: VRTLGCPPLSPGAPG*IIQAQAGVTLFFKF Trigger: GAACTTGAAGAATAGGGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGACAACCAAGTGTCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTCAGGAGGCTAGAGTCTaGGTCATCTCCAAGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSQEARV*VISKSH Trigger: GTGTGACTTGGAGATGACTCAGACTCTAGCCTCCTG...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTAGAAATACACCACTATaGGGTCTCCTGGTGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSRNTPL*GLLVRV Trigger: TACTCTCACCAGGAGACCCCATAGTGGTGTATTTCT...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CAA 90 bp | GGTGGCTTTCAACACCAGGCCTCATCTTTACCCTACATTCGAGCTTaGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GGFQHQASSLPYIRA*LPSGRTAAALEGWV Trigger: CACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGTAGGGTAAAGATGAGGCCTGGTGTTGAAAGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATAGGACAGCGGCAGCTTTaGAAGGTTGGGTGTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: YPNMTGLTKVLDRRRARIGQRQL*KVGCGG Trigger: TCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTTGGAAGGTTGGGTGTaGAGGAAGTTGCGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPKFKGCLGEKEWPAVFILEGWV*RKLRLG Trigger: CCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAA...GATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCGGACAGCGGCAGCTTTaGAAGGTTGGGTGTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SPKFKGCLGEKEWPAVFIGQRQL*KVGCGG Trigger: TCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC...GATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | GAACTTGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTTGTCTAGGAGAAGGAGAGAAGTGGGTGTaGCCGAGCCTGGCAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: ELVILLPKSPKFKGCLGEGEKWV*PSLANK Trigger: TTTGTTTGCCAGGCTCGGCCACACCCACTTCTCTCC...TTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATATTGTGGGCTTCTTCCTaGGTAGGTGTCCAGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YPNMTGLTKVLDRRRARILWASS*VGVQQG Trigger: TCCTTGCTGGACACCTACCCAGGAAGAAGCCCACAA...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCAGTCCCAGGGCTATCTaGTGGCTTTCAACACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SPKFKGCLGEKEWPAVFISPRAI*WLSTPG Trigger: GCCTGGTGTTGAAAGCCACCAGATAGCCCTGGGACT...GATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGCTAGAGTCTGAGTCATCTCCAAGTCACACTTCTAAACCTCCCCTCTTCTCAGACCCACAGAAATaGCCCACAGGCAAATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RRLESESSPSHTSKPPLFSDPQK*PTGKWS Trigger: TGACCATTTGCCTGTGGGGCATTTCTGTGGGTCTGA...GAAGAGGGGAGGTTTAGAAGTGTGACTTGGAGATGACTCAGACTCTAGCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATAGGAAGAGGAAGCCCCTaGGCGGCAGACCAGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PGGTGSKTVFIINNLTEIGRGSP*AADQEA Trigger: AGCCTCCTGGTCTGCCGCCCAGGGGCTTCCTCTTCC...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR GCA 90 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCCAGAGCTCTGAGGGGTaGAGAAGTAGAAGTTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SPKFKGCLGEKEWPAVFIQSSEG*RSRSCS Trigger: GGAACAACTTCTACTTCTGCACCCCTCAGAGCTCTG...GATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATATATCTTTGCTCCTTGTaGGCTTCTTCCTGGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: YPNMTGLTKVLDRRRARIYLCSL*ASSWVG Trigger: ACCTACCCAGGAAGAAGCCCACAAGGAGCAAAGATA...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCAGAAATACACCACTATaGGGTCTCCTGGTGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SPKFKGCLGEKEWPAVFIRNTPL*GLLVRV Trigger: TACTCTCACCAGGAGACCCCATAGTGGTGTATTTCT...GATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTGGGTGTGGCCGAGCCTaGCAAACAAAAACACTAGAC | + |
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Preference number: 2 (lower is better) Translates to: GCLGEKEWPAVFICLHMCGCGRA*QTKTLD Trigger: GTCTAGTGTTTTTGTTTGCCAGGCTCGGCCACACCC...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATACAGGAGGCTAGAGTCTaGGTCATCTCCAAGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: PGGTGSKTVFIINNLTEIQEARV*VISKSH Trigger: GTGTGACTTGGAGATGACTCAGACTCTAGCCTCCTG...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR GCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGAGGAGTCTAGACAAGTaGTCTACCACTGAACTACAT | + |
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Preference number: 2 (lower is better) Translates to: SFPTLPPNKLWCRYLRTERSLDK*STTELH Trigger: ATGTAGTTCAGTGGTAGAGCACTTGTCTAGACTCCT...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTAGGACAGCGGCAGCTTaGGAAGGTTGGGTGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSRTAAA*EGWVWR Trigger: CCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCT...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCAGGACAGCGGCAGCTTaGGAAGGTTGGGTGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTRTAAA*EGWVWR Trigger: CCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCT...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 72 bp | TCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTaGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SGRTAAALEGWV*RKLRLGLCLAS Trigger: AGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 72 bp | CTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTaGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: LPSGRTAAALEG*VWRKLRLGLCL Trigger: TAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 72 bp | GAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTaGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: ELCFHLGGQRQL*KVGCGGSCGWG Trigger: GCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCCGGAGGGTCCCAAAATaGTCCAGGCTAGTCTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTRRVPK*SRLVLN Trigger: GTTCAAGACTAGCCTGGACAATTTTGGGACCCTCCG...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTGAGTATCTTTGCTCCTaGTGGGCTTCTTCCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPEYLCS*WASSWV Trigger: TACCCAGGAAGAAGCCCACAAGGAGCAAAGATACTC...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTCTGGTGAGAGTATCTTaGCTCCTTGTGGGCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPLVRVS*LLVGFF Trigger: GAAGAAGCCCACAAGGAGCAAAGATACTCTCACCAG...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATATGGGTGTGGAGGAAGTaGCGGCTGGGGCTGTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: YPNMTGLTKVLDRRRARIWVWRK*RLGLCL Trigger: TAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCA...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 72 bp | ACTAGACACCAGAAGCTCCGCAGTCCCAGGGCTATCTaGTGGCTTTCAACACCAGGCCTCATCTTTACCCTA | + |
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Preference number: 3 (lower is better) Translates to: TRHQKLRSPRAI*WLSTPGLIFTL Trigger: TAGGGTAAAGATGAGGCCTGGTGTTGAAAGCCACCAGATAGCCCTGGGACTGCGGAGCTTCTGGTGTCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR CCA 72 bp | AGAACTGAGGTGGAGAGAAGTGGGTGTGGCCGAGCCTaGCAAACAAAAACACTAGACACCAGAAGCTCCGCA | + |
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Preference number: 3 (lower is better) Translates to: RTEVERSGCGRA*QTKTLDTRSSA Trigger: TGCGGAGCTTCTGGTGTCTAGTGTTTTTGTTTGCCAGGCTCGGCCACACCCACTTCTCTCCACCTCAGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATAGGCAGCTTTGGAAGGTaGGGTGTGGAGGAAGTTGCG | + |
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Preference number: 3 (lower is better) Translates to: YPNMTGLTKVLDRRRARIGSFGR*GVEEVA Trigger: CGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCC...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| 3UTR-3UTR CAA 90 bp | GAACTTGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTTGTCTAGGAGAAGGCAGCTTTGGAAGGTaGGGTGTGGAGGAAGTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: ELVILLPKSPKFKGCLGEGSFGR*GVEEVA Trigger: CGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCC...TTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR GCA 72 bp | AACACCAGGCCTCATCTTTACCCTACATTCGAGCTTTaGTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NTRPHLYPTFEL*FHLGGQRQLWK Trigger: CTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGTAGGGTAAAGATGAGGCCTGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CCA 72 bp | CTCATCTTTACCCTACATTCGAGCTTTGCTTCCATCTaGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LIFTLHSSFASI*EDSGSFGRLGV Trigger: CACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGTAGGGTAAAGATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR-3UTR CAA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATAGAGTATCTTTGCTCCTaGTGGGCTTCTTCCTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: YPNMTGLTKVLDRRRARIEYLCS*WASSWV Trigger: TACCCAGGAAGAAGCCCACAAGGAGCAAAGATACTC...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR-3UTR CAA 90 bp | GAACTTGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTTGTCTAGGAGAACTGGTGAGAGTATCTTaGCTCCTTGTGGGCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELVILLPKSPKFKGCLGELVRVS*LLVGFF Trigger: GAAGAAGCCCACAAGGAGCAAAGATACTCTCACCAG...TTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR TCA 72 bp | AGGGTCCCAAAATTGTCCAGGCTAGTCTTGAACTTGTaGTCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RVPKLSRLVLNL*SSYPSPPSSRV Trigger: AACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTCAAGACTAGCCTGGACAATTTTGGGACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR GCA 72 bp | CCTATTCTTCAAGTTCCCAGGAGGAGTCTAGACAAGTaGTCTACCACTGAACTACATCCTGAGTTCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PILQVPRRSLDK*STTELHPEFSV Trigger: AACAGAGAACTCAGGATGTAGTTCAGTGGTAGAGCACTTGTCTAGACTCCTCCTGGGAACTTGAAGAATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CCA 72 bp | ACGCAATCTTTTCCGACATTGCCTCCAAACAAGCTTTaGTGCAGATATTTGAGAACAGAGGGAGGAATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TQSFPTLPPNKL*CRYLRTEGGMW Trigger: CCACATTCCTCCCTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGATTGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CCA 72 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATaGCCAGCGGTGTTTATCTGTTTACATATGTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: SPKFKGCLGEKE*PAVFICLHMCM Trigger: CATACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTCCCGGAGGGTGGCACTaGCTGGAGAAGGCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSPGGWH*LEKARP Trigger: CGGCCTGGCCTTCTCCAGCCAGTGCCACCCTCCGGG...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTGGCCTGCGAGCTGCTaGGTGCCTGCGACTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSWPASC*VPATGS Trigger: GGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCA...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTCTCCAGCAGCCATCCTaGGACCCAGGAGGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSLQQPS*DPGGRP Trigger: TGGGCGGCCTCCTGGGTCCCAGGATGGCTGCTGGAG...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACCTTCAGCCTCCGCTTTaGTCCCTCCGACCCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASSWVGVQQGRGSPWAADLQPPL*SLRPRH Trigger: GTGGCGGGGTCGGAGGGAGCAAAGCGGAGGCTGAAG...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGGAGGCCGGAGCAGGTaGTGCAGACGAAGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCGGRSR*CRRSCP Trigger: TGGGCAGCTTCGTCTGCACCACCTGCTCCGGCCTCC...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTGGGCTTGGGCAGGGGTaGCGAAGGGGTTGGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSGLGQG*RRGWCR Trigger: CCTACACCAACCCCTTCGCCACCCCTGCCCAAGCCC...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTGGGCTTGGGCAGGGGTaGCGAAGGGGTTGGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPGLGQG*RRGWCR Trigger: CCTACACCAACCCCTTCGCCACCCCTGCCCAAGCCC...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGGAAGGCAGCTGGGCTTaGGCAGGGGTGGCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGRTAAALEGWVWRKLREGSWA*AGVAKG Trigger: CCCCTTCGCCACCCCTGCCCAAGCCCAGCTGCCTTC...CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTGGCTCAGTGGCCTCTaGCCCAGCTTAGAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSWLSGL*PSLEVP Trigger: GGGGACCTCTAAGCTGGGGCAGAGGCCACTGAGCCA...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTTGGCTCAGTGGCCTCTaGCCCAGCTTAGAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPWLSGL*PSLEVP Trigger: GGGGACCTCTAAGCTGGGGCAGAGGCCACTGAGCCA...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACTACGTGACCCCGCGCTaGGCGCACTCGAAACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSWVGVQQGRGSPWAADYVTPR*AHSKQW Trigger: CCACTGTTTCGAGTGCGCCCAGCGCGGGGTCACGTA...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCAGAGGCTGGGAGCTCCTaGCCTGCGAGCTGCTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPEAGSS*PASCCV Trigger: CACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCCTC...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTTTGGTAGAAGGCAGCTaGGCTTGGGCAGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCLVEGS*AWAGVA Trigger: CGCCACCCCTGCCCAAGCCCAGCTGCCTTCTACCAA...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGAGGGTGGCACTGGCTaGAGAAGGCCAGGCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCEGGTG*RRPGRT Trigger: TGTTCGGCCTGGCCTTCTCCAGCCAGTGCCACCCTC...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCGAGGGTGGCACTGGCTaGAGAAGGCCAGGCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTEGGTG*RRPGRT Trigger: TGTTCGGCCTGGCCTTCTCCAGCCAGTGCCACCCTC...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACAGCCGGCTGGCTCAGTaGCCTCTGCCCCAGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSWVGVQQGRGSPWAADSRLAQ*PLPQLR Trigger: TCTAAGCTGGGGCAGAGGCCACTGAGCCAGCCGGCT...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTTGGGAGCTCCTGGCCTaGGAGCTGCTGCGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSWELLA*ELLRAC Trigger: GCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCA...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTCTCCAGCAGCCATCCTaGGACCCAGGAGGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSLQQPS*DPGGRP Trigger: TGGGCGGCCTCCTGGGTCCCAGGATGGCTGCTGGAG...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CAA 72 bp | GCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTaGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASIWEDSGSFGR*GVEEVAAGAVP Trigger: AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGGAGCTGCTGCGTGCCTaGGACTGGCTCCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGELLRA*DWLPGW Trigger: CCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTC...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGGCCTGCGAGCTGCTaGGTGCCTGCGACTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGWPASC*VPATGS Trigger: GGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCA...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGGGAGCTCCTGGCCTaGGAGCTGCTGCGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGWELLA*ELLRAC Trigger: GCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCA...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTCCGCCAGCAGGTCAGTaGTGGCTTTCTTGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPPPAGQ*WLSWWM Trigger: CATCCACCAAGAAAGCCAGCACTGACCTGCTGGCGG...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGGGTTGACTGGCAGCTaGAAGGGGTGCCACACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCGLTGS*KGCHTK Trigger: TTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCC...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCTCTGGGACAGAGCCCTaGACAGGGGTAGCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTSGTEP*TGVAET Trigger: TGTCTCTGCTACCCCTGTCCAGGGCTCTGTCCCAGA...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | CCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGGCAAGGTTGTTGGGTTaGCTGGCAGCTGCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGRTAAALEGWVWRKLRARLLG*LAAARG Trigger: ACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGC...CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGCTTCAGCCTCCGCTTTaGTCCCTCCGACCCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGLQPPL*SLRPRH Trigger: GTGGCGGGGTCGGAGGGAGCAAAGCGGAGGCTGAAG...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCATCCCAAAAACACTaGCAGGGAGACCTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCASQKH*QGDLQQ Trigger: CTGCTGGAGGTCTCCCTGGCAGTGTTTTTGGGATGC...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTGGCCAGGCCGAACACTaGTCATCCCAAAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSGQAEH*SSQSQA Trigger: GGCCTGGCTTTGGGATGAGCAGTGTTCGGCCTGGCC...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGGGAGGCCGGAGCAGGTaGTGCAGACGAAGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGGGRSR*CRRSCP Trigger: TGGGCAGCTTCGTCTGCACCACCTGCTCCGGCCTCC...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACAATGGGTTTCCCTTCTaGGACAGAGCCCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSWVGVQQGRGSPWAADNGFPF*DRALDR Trigger: CCTGTCCAGGGCTCTGTCCCAGAAGGGAAACCCATT...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | CCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGGGCTTTCTTGGTGGATaGATGGGAAGGAGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSGRTAAALEGWVWRKLRGFLGG*MGRRLG Trigger: TCCCAGCCTCCTTCCCATTCATCCACCAAGAAAGCC...CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCACCGCCAGCAGGTCAGTaGTGGCTTTCTTGGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPPPAGQ*WLSWWM Trigger: CATCCACCAAGAAAGCCAGCACTGACCTGCTGGCGG...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCAGGCAGCTGCAAGGGGTaGCACACCAAACGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPGSCKG*HTKRRH Trigger: ATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCC...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACCCCCTTGACTTGCTCTaGGGGGACGTACCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASSWVGVQQGRGSPWAADPLDLL*GDVPSF Trigger: AAAAGATGGTACGTCCCCCCAGAGCAAGTCAAGGGG...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCAGGATCAGAGAGAGATaGCACAGGGTCTCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTRIRER*HRVSQK Trigger: CTTCTGGGAGACCCTGTGCCATCTCTCTCTGATCCT...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACCAGGCTGGCTTGAAGTaGAAGCAGGATCAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSWVGVQQGRGSPWAADQAGLK*KQDQRE Trigger: CTCTCTCTGATCCTGCTTCCACTTCAAGCCAGCCTG...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGTTGGCAAAGCCTCCATaGGCAGGAGTCTGGCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: PSGRTAAALEGWVWRKLRLAKPP*AGVWPT Trigger: AGTAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAA...CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTAACTCCTTCACCTTCTaGGGATCCCTGGAATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCNSFTF*GSLESG Trigger: ACCAGATTCCAGGGATCCTCAGAAGGTGAAGGAGTT...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTGCAAGGTTGTTGGGTTaGCTGGCAGCTGCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSARLLG*LAAARG Trigger: ACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGC...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCATGTGGGGAACACGGGTaGAGAGAAGGGACTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPCGEHG*REGTGK Trigger: TTTGCCAGTCCCTTCTCTGCACCCGTGTTCCCCACA...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTTCTGGGACAGAGCCCTaGACAGGGGTAGCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSSGTEP*TGVAET Trigger: TGTCTCTGCTACCCCTGTCCAGGGCTCTGTCCCAGA...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCAAATGGGTTTCCCTTCTaGGACAGAGCCCTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPNGFPF*DRALDR Trigger: CCTGTCCAGGGCTCTGTCCCAGAAGGGAAACCCATT...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTCAGTGCTGGCTTTCTTaGTGGATGAATGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPQCWLS*WMNGKE Trigger: CTCCTTCCCATTCATCCACCAAGAAAGCCAGCACTG...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCGCTAGACCATTGGGTTaGAATGGGTTGGTAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTARPLG*NGLVEG Trigger: GCCTTCTACCAACCCATTCCAACCCAATGGTCTAGC...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTGCTAGACCATTGGGTTaGAATGGGTTGGTAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPARPLG*NGLVEG Trigger: GCCTTCTACCAACCCATTCCAACCCAATGGTCTAGC...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCAGAAGATCCATTCTGCTaGTCGGCCAGTCCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPEDPFC*SASPAC Trigger: ACAGGCTGGACTGGCCGACCAGCAGAATGGATCTTC...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCGAATGGGTTTGTGGTTaGAGGTTTGGAGGCAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTEWVCG*RFGGKR Trigger: GCGTTTGCCTCCAAACCTCCAACCACAAACCCATTC...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CAA 72 bp | CTTGGTTGTCCTCCCCTGAGCCCTGGGGCTCCGGGTTaGATTATCCAGGCACAGGCAGGAGTTACCCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LGCPPLSPGAPG*IIQAQAGVTLF Trigger: GAATAGGGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGACAACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTGGACTTCAGGCTCAGTaGAAGTTGTCATGGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPGLQAQ*KLSWRL Trigger: CAATCTCCATGACAACTTTCACTGAGCCTGAAGTCC...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTGGACTTCAGGCTCAGTaGAAGTTGTCATGGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSGLQAQ*KLSWRL Trigger: CAATCTCCATGACAACTTTCACTGAGCCTGAAGTCC...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGGGGTTGACTGGCAGCTaGAAGGGGTGCCACACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGGLTGS*KGCHTK Trigger: TTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCC...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | AGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTTCATTTCCACGAGATTaGAGGAACAGGACTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSFGRLGVEEVAAGAVPSFPRD*RNRTSG Trigger: GCCTGAAGTCCTGTTCCTCCAATCTCGTGGAAATGA...AGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGAGGATCCCTGGAATCTaGTATCAACGATGTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSGRTAAALEGWVWRKLRRIPGI*YQRCPS Trigger: GCTCGGACATCGTTGATACCAGATTCCAGGGATCCT...CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCACCCCTTGACTTGCTCTaGGGGGACGTACCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPPLDLL*GDVPSF Trigger: AAAAGATGGTACGTCCCCCCAGAGCAAGTCAAGGGG...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGTGCTGGCTTTCTTGGTaGATGAATGGGAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGRTAAALEGWVWRKLRCWLSW*MNGKEA Trigger: AGCCTCCTTCCCATTCATCCACCAAGAAAGCCAGCA...CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CAA 72 bp | TCTCGTGTGTATTGTGGAAAGCGTCAGGACACTTGGTaGTCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVYCGKRQDTW*SSPEPWGSGFD Trigger: ATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGACAACCAAGTGTCCTGACGCTTTCCACAATACACACGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATAGGCCAGGCCGAACACTaGTCATCCCAAAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YPNMTGLTKVLDRRRARIGQAEH*SSQSQA Trigger: GGCCTGGCTTTGGGATGAGCAGTGTTCGGCCTGGCC...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGGGAACACGGGTaGAGAGAAGGGACTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGCGEHG*REGTGK Trigger: TTTGCCAGTCCCTTCTCTGCACCCGTGTTCCCCACA...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGTGGCGGTTCCCGGCCTaGCTGCAGCCGCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPTLPPNKLWCRYLRTEWRFPA*LQPPSS Trigger: GGAGCTGGGCGGCTGCAGCCAGGCCGGGAACCGCCA...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCTAGAGTCTGAGTCATCTCCAAGTCACACTTCTAAACCTCCCCTCTTCTACGTGACCCCGCGCTaGGCGCACTCGAAACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLESESSPSHTSKPPLFYVTPR*AHSKQW Trigger: CCACTGTTTCGAGTGCGCCCAGCGCGGGGTCACGTA...GAAGAGGGGAGGTTTAGAAGTGTGACTTGGAGATGACTCAGACTCTAGCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GAACTTGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAGCCGGCTGGCTCAGTaGCCTCTGCCCCAGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELVILLPKSPKFKGCLGESRLAQ*PLPQLR Trigger: TCTAAGCTGGGGCAGAGGCCACTGAGCCAGCCGGCT...TTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTACAAGAATGGGTTTGTaGTTGGAGGTTTGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPEPWGSGFDYPGTGRSTRMGL*LEVWRQ Trigger: TTGCCTCCAAACCTCCAACCACAAACCCATTCTTGT...ACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTAGTTGTCATGGAGATTaGCTTGACTCGATGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSSCHGD*LDSMRG Trigger: CCCCCTCATCGAGTCAAGTCAATCTCCATGACAACT...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTTGGCGGTTCCCGGCCTaGCTGCAGCCGCCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCWRFPA*LQPPSS Trigger: GGAGCTGGGCGGCTGCAGCCAGGCCGGGAACCGCCA...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCACCTTCTGAGGATCCCTaGAATCTGGTATCAACGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPPSEDP*NLVSTM Trigger: CATCGTTGATACCAGATTCCAGGGATCCTCAGAAGG...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTTGCTGGCTTTCTTGGTaGATGAATGGGAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSCWLSW*MNGKEA Trigger: AGCCTCCTTCCCATTCATCCACCAAGAAAGCCAGCA...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTCAGTGCTGGCTTTCTTaGTGGATGAATGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSQCWLS*WMNGKE Trigger: CTCCTTCCCATTCATCCACCAAGAAAGCCAGCACTG...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | GAACTTGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTTGTCTAGGAGAATCCAAAGCCTGGGAATaGGGCAAAGGCTGGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELVILLPKSPKFKGCLGESKAWE*GKGWHH Trigger: GTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGA...TTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGGGCCGGAGCAGGTGGTaGAGACGAAGCTGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPTLPPNKLWCRYLRTEGRSRW*RRSCPR Trigger: CCGTGGGCAGCTTCGTCTGCACCACCTGCTCCGGCC...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTCCCGGAGGGTGGCACTaGCTGGAGAAGGCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCPGGWH*LEKARP Trigger: CGGCCTGGCCTTCTCCAGCCAGTGCCACCCTCCGGG...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTTGTGGTTGGAGGTTTaGAGGCAAACGCTGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGLWLEV*RQTLRI Trigger: GATCCTCAGCGTTTGCCTCCAAACCTCCAACCACAA...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CAA 72 bp | CAACACCAGGCCTCATCTTTACCCTACATTCGAGCTTaGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHQASSLPYIRA*LPSGRTAAALE Trigger: TTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGTAGGGTAAAGATGAGGCCTGGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | AGGAGGCTAGAGTCTGAGTCATCTCCAAGTCACACTTCTAAACCTCCCCTCTTCGGCTTTCTTGGTGGATaGATGGGAAGGAGGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRLESESSPSHTSKPPLFGFLGG*MGRRLG Trigger: TCCCAGCCTCCTTCCCATTCATCCACCAAGAAAGCC...GAAGAGGGGAGGTTTAGAAGTGTGACTTGGAGATGACTCAGACTCTAGCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTGGCCGGAGCAGGTGGTaGAGACGAAGCTGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCGRSRW*RRSCPR Trigger: CCGTGGGCAGCTTCGTCTGCACCACCTGCTCCGGCC...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCGGCAGCTGCAAGGGGTaGCACACCAAACGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPKFKGCLGEKEWPAVFIGSCKG*HTKRRH Trigger: ATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCC...GATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGGCGCACTCGAAACAGTaGCGGTTCCCGGCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFPTLPPNKLWCRYLRTEAHSKQ*RFPAWL Trigger: CAGCCAGGCCGGGAACCGCCACTGTTTCGAGTGCGC...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | ACATTCGAGCTTTGCTTCCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGCCTTCTGAGGATCCCTaGAATCTGGTATCAACGATG | + |
|
Preference number: 4 (lower is better) Translates to: TFELCFHLGGQRQLWKVGPSEDP*NLVSTM Trigger: CATCGTTGATACCAGATTCCAGGGATCCTCAGAAGG...CCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGGAAGCAAAGCTCGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCTAGAGTCTGAGTCATCTCCAAGTCACACTTCTAAACCTCCCCTCTTCAGGATCAGAGAGAGATaGCACAGGGTCTCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRLESESSPSHTSKPPLFRIRER*HRVSQK Trigger: CTTCTGGGAGACCCTGTGCCATCTCTCTCTGATCCT...GAAGAGGGGAGGTTTAGAAGTGTGACTTGGAGATGACTCAGACTCTAGCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATAGAAGGCAGCTGGGCTTaGGCAGGGGTGGCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTGSKTVFIINNLTEIEGSWA*AGVAKG Trigger: CCCCTTCGCCACCCCTGCCCAAGCCCAGCTGCCTTC...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGTTGGTAGAAGGCAGCTaGGCTTGGGCAGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SFPTLPPNKLWCRYLRTELVEGS*AWAGVA Trigger: CGCCACCCCTGCCCAAGCCCAGCTGCCTTCTACCAA...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATAAGGATCCCTGGAATCTaGTATCAACGATGTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YPNMTGLTKVLDRRRARIRIPGI*YQRCPS Trigger: GCTCGGACATCGTTGATACCAGATTCCAGGGATCCT...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GAACTTGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTTGTCTAGGAGAATTGTGGTTGGAGGTTTaGAGGCAAACGCTGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ELVILLPKSPKFKGCLGELWLEV*RQTLRI Trigger: GATCCTCAGCGTTTGCCTCCAAACCTCCAACCACAA...TTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CAA 72 bp | TGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTaGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CDPPTQVPQVQG*SRRKRMASGVY Trigger: ATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTGCTCCCAGGCTGGCTTaGAGTGGAAGCAGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCAPRLA*SGSRIR Trigger: TCTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGC...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTTCCAAAGCCTGGGAATaGGGCAAAGGCTGGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCSKAWE*GKGWHH Trigger: GTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGA...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGTTGGCAAAGCCTCCATaGGCAGGAGTCTGGCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SFPTLPPNKLWCRYLRTELAKPP*AGVWPT Trigger: AGTAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAA...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATAGCTCCCAGGCTGGCTTaGAGTGGAAGCAGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGGTGSKTVFIINNLTEIAPRLA*SGSRIR Trigger: TCTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGC...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR GCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTGCATCCCAAAAACACTaGCAGGGAGACCTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCASQKH*QGDLQQ Trigger: CTGCTGGAGGTCTCCCTGGCAGTGTTTTTGGGATGC...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGCCAGAAGTGTCCGAATaGGTTTCCCTTCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPTLPPNKLWCRYLRTEPEVSE*VSLLGQ Trigger: CTGTCCCAGAAGGGAAACCCATTCGGACACTTCTGG...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCGACATTGCCTCCAAACAAGCTTTGGTGCAGATATTTGAGAACAGAGAGTTGTCATGGAGATTaGCTTGACTCGATGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPTLPPNKLWCRYLRTESCHGD*LDSMRG Trigger: CCCCCTCATCGAGTCAAGTCAATCTCCATGACAACT...CTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTCAGGCTGGCTTGAAGTaGAAGCAGGATCAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCQAGLK*KQDQRE Trigger: CTCTCTCTGATCCTGCTTCCACTTCAAGCCAGCCTG...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATAGAAGATCCATTCTGCTaGTCGGCCAGTCCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGTGSKTVFIINNLTEIEDPFC*SASPAC Trigger: ACAGGCTGGACTGGCCGACCAGCAGAATGGATCTTC...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATACCAGAAGTGTCCGAATaGGTTTCCCTTCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTGSKTVFIINNLTEIPEVSE*VSLLGQ Trigger: CTGTCCCAGAAGGGAAACCCATTCGGACACTTCTGG...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| 3UTR CAA 72 bp | AACGCAATCTTTTCCGACATTGCCTCCAAACAAGCTTaGGTGCAGATATTTGAGAACAGAGGGAGGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NAIFSDIASKQA*VQIFENRGRNV Trigger: CACATTCCTCCCTCTGTTCTCAAATATCTGCACCAAAGCTTGTTTGGAGGCAATGTCGGAAAAGATTGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTTCATTTCCACGAGATTaGAGGAACAGGACTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GCLGEKEWPAVFICLHMCSFPRD*RNRTSG Trigger: GCCTGAAGTCCTGTTCCTCCAATCTCGTGGAAATGA...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATAGAATGGGTTTGTGGTTaGAGGTTTGGAGGCAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGTGSKTVFIINNLTEIEWVCG*RFGGKR Trigger: GCGTTTGCCTCCAAACCTCCAACCACAAACCCATTC...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATAACAAGAATGGGTTTGTaGTTGGAGGTTTGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGGTGSKTVFIINNLTEITRMGL*LEVWRQ Trigger: TTGCCTCCAAACCTCCAACCACAAACCCATTCTTGT...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS GCA 90 bp | CCCCGCGCTGGGCGCACTCGAAACAGTGGCGGTTCCCGGCCTGGCTaGAGCCGCCCAGCTCCCGCACTCGGCGGCACCACACCTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRAGRTRNSGGSRPG*SRPAPALGGTTPPK Trigger: CTTCGGAGGTGTGGTGCCGCCGAGTGCGGGAGCTGGGCGGCTGCAGCCAGGCCGGGAACCGCCACTGTTTCGAGTGCGCCCAGCGCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | GTGACCCCGCGCTGGGCGCACTCGAAACAGTGGCGGTTCCCGGCCTaGCTGCAGCCGCCCAGCTCCCGCACTCGGCGGCACCACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTPRWAHSKQWRFPA*LQPPSSRTRRHHTS Trigger: GGAGGTGTGGTGCCGCCGAGTGCGGGAGCTGGGCGGCTGCAGCCAGGCCGGGAACCGCCACTGTTTCGAGTGCGCCCAGCGCGGGGTCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | GTGATGTCCACATACGTGACCCCGCGCTGGGCGCACTCGAAACAGTaGCGGTTCCCGGCCTGGCTGCAGCCGCCCAGCTCCCGCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VMSTYVTPRWAHSKQ*RFPAWLQPPSSRTR Trigger: CCGAGTGCGGGAGCTGGGCGGCTGCAGCCAGGCCGGGAACCGCCACTGTTTCGAGTGCGCCCAGCGCGGGGTCACGTATGTGGACATCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | CGGCCAGTCCAGCCTGTGTGGGGAACACGGGTGCAGAGAAGGGACTaGCAAAGGCCCCGGAGGGTGGCACTGGCTGGAGAAGGCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPVQPVWGTRVQRRD*QRPRRVALAGEGQA Trigger: GGCCTGGCCTTCTCCAGCCAGTGCCACCCTCCGGGGCCTTTGCCAGTCCCTTCTCTGCACCCGTGTTCCCCACACAGGCTGGACTGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS GCA 90 bp | CGGCCGACTGCAGGGCAGGAACCTGGCTCGGCATCCCAAAAACACTaGCAGGGAGACCTCCAGCAGCCATCCTGGGACCCAGGAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPTAGQEPGSASQKH*QGDLQQPSWDPGGR Trigger: GCGGCCTCCTGGGTCCCAGGATGGCTGCTGGAGGTCTCCCTGGCAGTGTTTTTGGGATGCCGAGCCAGGTTCCTGCCCTGCAGTCGGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | CAGACGAAGCTGCCCACGGTGATGTCCACATACGTGACCCCGCGCTaGGCGCACTCGAAACAGTGGCGGTTCCCGGCCTGGCTGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QTKLPTVMSTYVTPR*AHSKQWRFPAWLQP Trigger: CGGCTGCAGCCAGGCCGGGAACCGCCACTGTTTCGAGTGCGCCCAGCGCGGGGTCACGTATGTGGACATCACCGTGGGCAGCTTCGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS GCA 90 bp | TGGGAAGGAGGCTGGGAGCTCCTGGCCTGCGAGCTGCTGCGTGCCTaGGACTGGCTCCCAGGCTGGCTTGAAGTGGAAGCAGGATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WEGGWELLACELLRA*DWLPGWLEVEAGSE Trigger: CTCTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCCTCCTTCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 90 bp | TGCTGGCTTTCTTGGTGGATGAATGGGAAGGAGGCTGGGAGCTCCTaGCCTGCGAGCTGCTGCGTGCCTGCGACTGGCTCCCAGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CWLSWWMNGKEAGSS*PASCCVPATGSQAG Trigger: GCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCCTCCTTCCCATTCATCCACCAAGAAAGCCAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 90 bp | GGTGCAGAGAAGGGACTGGCAAAGGCCCCGGAGGGTGGCACTGGCTaGAGAAGGCCAGGCCGAACACTGCTCATCCCAAAGCCAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GAEKGLAKAPEGGTG*RRPGRTLLIPKPGP Trigger: AGGGCCTGGCTTTGGGATGAGCAGTGTTCGGCCTGGCCTTCTCCAGCCAGTGCCACCCTCCGGGGCCTTTGCCAGTCCCTTCTCTGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | CCCCTGAGCCCTGGGGCTCCGGGTTTGATTATCCAGGCACAGGCAGGAGTTACCGCTTCAGCCTCCGCTTaGCTCCCTCCGACCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSPGAPGLIIQAQAGVTASASA*LPPTPP Trigger: TGGCGGGGTCGGAGGGAGCAAAGCGGAGGCTGAAGC...GGTAACTCCTGCCTGTGCCTGGATAATCAAACCCGGAGCCCCAGGGCTCAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACGCTTCAGCCTCCGCTTaGCTCCCTCCGACCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSWVGVQQGRGSPWAADASASA*LPPTPP Trigger: TGGCGGGGTCGGAGGGAGCAAAGCGGAGGCTGAAGC...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS GCA 90 bp | TGGTGGATGAATGGGAAGGAGGCTGGGAGCTCCTGGCCTGCGAGCTaGTGCGTGCCTGCGACTGGCTCCCAGGCTGGCTTGAAGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WWMNGKEAGSSWPAS*CVPATGSQAGLKWK Trigger: CTTCCACTTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCCTCCTTCCCATTCATCCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS GCA 90 bp | AGCTGCAAGGGGTGCCACACCAAACGCAGACATCTGGCCACTTCCTaGAGGGGTCGGCTGGGCCTGGAATGGCGCTTGGACGGATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCKGCHTKRRHLATS*RGRLGLEWRLDGWR Trigger: CCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAGTGGCCAGATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS GCA 90 bp | GAGACCTCCAGCAGCCATCCTGGGACCCAGGAGGCCGCCCACATCTaGAAGGTTGTTGGGTTGACTGGCAGCTGCAAGGGGTGCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: ETSSSHPGTQEAAHI*KVVGLTGSCKGCHT Trigger: GGTGTGGCACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCAGATGTGGGCGGCCTCCTGGGTCCCAGGATGGCTGCTGGAGGTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | CGCAGACATCTGGCCACTTCCTGCAGGGGTCGGCTGGGCCTGGAATaGCGCTTGGACGGATGGAGGGAGGCTTCCGAAGGTGGAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRHLATSCRGRLGLE*RLDGWREASEGGRA Trigger: AGCTCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAGTGGCCAGATGTCTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS CCA 90 bp | GCCACACCAAACGCAGACATCTGGCCACTTCCTGCAGGGGTCGGCTaGGCCTGGAATGGCGCTTGGACGGATGGAGGGAGGCTTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ATPNADIWPLPAGVG*AWNGAWTDGGRLPK Trigger: CTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAGTGGCCAGATGTCTGCGTTTGGTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS CCA 90 bp | AGCATCCGATTGGCTGCAGGGGTCGGCTGGGCCTGGAATGGCGCTTaGACGGATGGAGGGAGGCTTCCGAAGGTGGAAGAGCTAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SIRLAAGVGWAWNGA*TDGGRLPKVEELGL Trigger: CAGCCCTAGCTCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGCCAATCGGATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS GCA 90 bp | GCTTTCTTGGTGGATGAATGGGAAGGAGGCTGGGAGCTCCTGGCCTaGGAGCTGCTGCGTGCCTGCGACTGGCTCCCAGGCTGGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AFLVDEWEGGWELLA*ELLRACDWLPGWLE Trigger: TTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCCTCCTTCCCATTCATCCACCAAGAAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 90 bp | CTCCTGGCCTGCGAGCTGCTGCGTGCCTGCGACTGGCTCCCAGGCTaGCTTGAAGTGGAAGCAGGATCAGAGAGAGATGGCACAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLACELLRACDWLPG*LEVEAGSERDGTGS Trigger: AGACCCTGTGCCATCTCTCTCTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 90 bp | ACTTCCTGCAGGGGTCGGCTGGGCCTGGAATGGCGCTTGGACGGATaGAGGGAGGCTTCCGAAGGTGGAAGAGCTAGGGCTGCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSCRGRLGLEWRLDG*REASEGGRARAAAE Trigger: TTCAGCAGCAGCCCTAGCTCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS CCA 90 bp | CCAAACGCAGACATCTGGCCACTTCCTGCAGGGGTCGGCTGGGCCTaGAATGGCGCTTGGACGGATGGAGGGAGGCTTCCGAAGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PNADIWPLPAGVGWA*NGAWTDGGRLPKVE Trigger: TTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAGTGGCCAGATGTCTGCGTTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS CCA 90 bp | CGCCAAAGGAAGATCCATTCTGCTGGTCGGCCAGTCCAGCCTGTGTaGGGAACACGGGTGCAGAGAAGGGACTGGCAAAGGCCCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQRKIHSAGRPVQPV*GTRVQRRDWQRPRR Trigger: CCTCCGGGGCCTTTGCCAGTCCCTTCTCTGCACCCGTGTTCCCCACACAGGCTGGACTGGCCGACCAGCAGAATGGATCTTCCTTTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS CCA 90 bp | ATTGGCTGCAGGGGTCGGCTGGGCCTGGAATGGCGCTTGGACGGATaGAGGGAGGCTTCCGAAGGTGGAAGAGCTAGGGCTGCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IGCRGRLGLEWRLDG*REASEGGRARAAAE Trigger: TTCAGCAGCAGCCCTAGCTCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGCCAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | TGGCCTACTCCAAAGCCTGGGAATGAGGCAAAGGCTGGCACCACCTaGGGAGCAGCAAAGGGGTCTCCCCCGATATCCGCCAGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WPTPKPGNEAKAGTT*GAAKGSPPISASRS Trigger: TGACCTGCTGGCGGATATCGGGGGAGACCCCTTTGCTGCTCCCCAGGTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGAGTAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS CCA 90 bp | CCACTTCCTCCAAAGCCTGGGAATGAGGCAAAGGCTGGCACCACCTaGGGAGCAGCAAAGGGGTCTCCCCCGATATCCGCCAGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPPKPGNEAKAGTT*GAAKGSPPISASRS Trigger: TGACCTGCTGGCGGATATCGGGGGAGACCCCTTTGCTGCTCCCCAGGTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGAGGAAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198657.2 |
||
| CDS TCA 90 bp | ATCCTGGGACCCAGGAGGCCGCCCACATCTGCAAGGTTGTTGGGTTaGCTGGCAGCTGCAAGGGGTGCCACACCAAACGCAGACATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILGPRRPPTSARLLG*LAAARGATPNADIW Trigger: CCAGATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCAGATGTGGGCGGCCTCCTGGGTCCCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | GAGCAGCAAAGGGGTCTCCCCCGATATCCGCCAGCAGGTCAGTGCTaGCTTTCTTGGTGGATGAATGGGAAGGAGGCTGGGAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EQQRGLPRYPPAGQC*LSWWMNGKEAGSSW Trigger: CCAGGAGCTCCCAGCCTCCTTCCCATTCATCCACCAAGAAAGCCAGCACTGACCTGCTGGCGGATATCGGGGGAGACCCCTTTGCTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 90 bp | CCCAGCTTAGAGGTCCCCAAGTCGCCAAAGGAAGATCCATTCTGCTaGTCGGCCAGTCCAGCCTGTGTGGGGAACACGGGTGCAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLEVPKSPKEDPFC*SASPACVGNTGAEK Trigger: CTTCTCTGCACCCGTGTTCCCCACACAGGCTGGACTGGCCGACCAGCAGAATGGATCTTCCTTTGGCGACTTGGGGACCTCTAAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS CCA 90 bp | CTGCTGAAGGCATCGAAGTTGGCAAAGCCTCCATGGGCAGGAGTCTaGCCTCCAAAGCCTGGGAATGAGGCAAAGGCTGGCACCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLKASKLAKPPWAGV*PPKPGNEAKAGTTW Trigger: CCAGGTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151839.2 |
||
| CDS-3UTR CAA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCAGGCTCCCAGGCTGGCTaGAAGTGGAAGCAGGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPGSQAG*KWKQDQ Trigger: CTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGCC...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS CCA 90 bp | CTGCTGAAGGCATCGAAGTTGGCAAAGCCTCCATGGGCAGGAGTCTaGCCTACTCCAAAGCCTGGGAATGAGGCAAAGGCTGGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLKASKLAKPPWAGV*PTPKPGNEAKAGTT Trigger: GGTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGAGTAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | CCATCTGGGAGGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGAAGGCATCGAAGTaGGCAAAGCCTCCATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGRTAAALEGWVWRKLRLKASK*AKPPWA Trigger: TGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAG...CCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCCTCCCAGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS CCA 90 bp | AGATGGCACAGGGTCTCCCAGAAGTGTCCGAATGGGTTTCCCTTCTaGGACAGAGCCCTGGACAGGGGTAGCAGAGACACTGCCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWHRVSQKCPNGFPF*DRALDRGSRDTAFA Trigger: AGCAAAGGCAGTGTCTCTGCTACCCCTGTCCAGGGCTCTGTCCCAGAAGGGAAACCCATTCGGACACTTCTGGGAGACCCTGTGCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | GAGCTAGGGCTGCTGCTGAAGGCATCGAAGTTGGCAAAGCCTCCATaGGCAGGAGTCTGGCCTACTCCAAAGCCTGGGAATGAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELGLLLKASKLAKPP*AGVWPTPKPGNEAK Trigger: CTTTGCCTCATTCCCAGGCTTTGGAGTAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAGCAGCAGCCCTAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | ACACTTCTAAACCTCCCCTCTTCCCAGATCCAGAAGCCCCGCAACCCAGGCCCATTGGGTTGGAATGGGTaGGTAGAAGGCAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLNLPSSQIQKPRNPGPLGWNG*VEGSWA Trigger: AGCCCAGCTGCCTTCTACCAACCCATTCCAACCCAA...TGGGCCTGGGTTGCGGGGCTTCTGGATCTGGGAAGAGGGGAGGTTTAGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | GGACAGCGGCAGCTTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTTTTGTGGTTGGAGGTTaGGAGGCAAACGCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GQRQLWKVGCGGSCGWGCFVVGG*EANAED Trigger: ATCCTCAGCGTTTGCCTCCAAACCTCCAACCACAAA...ACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAAGCTGCCGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | GCTTCTTCCTGGGTAGGTGTCCAGCAAGGAAGAGGAAGCCCCTGGGCGGCAGACTTTGTGGTTGGAGGTTaGGAGGCAAACGCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASSWVGVQQGRGSPWAADFVVGG*EANAED Trigger: ATCCTCAGCGTTTGCCTCCAAACCTCCAACCACAAA...GTCTGCCGCCCAGGGGCTTCCTCTTCCTTGCTGGACACCTACCCAGGAAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | AGGAGGCTAGAGTCTGAGTCATCTCCAAGTCACACTTCTAAACCTCCCCTCTTCGGCCTGGAATGGCGCTaGGACGGATGGAGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRLESESSPSHTSKPPLFGLEWR*DGWREA Trigger: AGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCC...GAAGAGGGGAGGTTTAGAAGTGTGACTTGGAGATGACTCAGACTCTAGCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAGTTCAAGGGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCGGCCTGGAATGGCGCTaGGACGGATGGAGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPKFKGCLGEKEWPAVFIGLEWR*DGWREA Trigger: AGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCC...GATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACCCTTGAACTTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | TTTGGAAGGTTGGGTGTGGAGGAAGTTGCGGCTGGGGCTGTGCCTAGCTTCTCTCTCATTTCCACGAGATaGGAGGAACAGGACTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FGRLGVEEVAAGAVPSFSLISTR*EEQDFR Trigger: CCTGAAGTCCTGTTCCTCCAATCTCGTGGAAATGAG...AGAGAAGCTAGGCACAGCCCCAGCCGCAACTTCCTCCACACCCAACCTTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | TATCCAAACATGACAGGGCTAACTAAAGTGCTTGACAGGAGGCGGGCACGCATACTGAAGGCATCGAAGTaGGCAAAGCCTCCATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YPNMTGLTKVLDRRRARILKASK*AKPPWA Trigger: TGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAG...TATGCGTGCCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | GAACTTGTGATCCTCCTACCCAAGTCCCCCAAGTTCAAGGGTTGTCTAGGAGAATCAGTGCTGGCTTTCTaGGTGGATGAATGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELVILLPKSPKFKGCLGESVLAF*VDEWEG Trigger: TCCTTCCCATTCATCCACCAAGAAAGCCAGCACTGA...TTCTCCTAGACAACCCTTGAACTTGGGGGACTTGGGTAGGAGGATCACAAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTTTGGGTTGGAATGGGTaGGTAGAAGGCAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GCLGEKEWPAVFICLHMCLGWNG*VEGSWA Trigger: AGCCCAGCTGCCTTCTACCAACCCATTCCAACCCAA...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS CCA 90 bp | TCTCATATTTTTCTTGGAGAAACTCCTTCACCTTCTGAGGATCCCTaGAATCTGGTATCAACGATGTCCGAGCATCAAAAAGACCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHIFLGETPSPSEDP*NLVSTMSEHQKDRA Trigger: GGCTCGGTCTTTTTGATGCTCGGACATCGTTGATACCAGATTCCAGGGATCCTCAGAAGGTGAAGGAGTTTCTCCAAGAAAAATATGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 90 bp | TTTTTCTTGGAGAAACTCCTTCACCTTCTGAGGATCCCTGGAATCTaGTATCAACGATGTCCGAGCATCAAAAAGACCGAGCCAGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: FFLEKLLHLLRIPGI*YQRCPSIKKTEPDF Trigger: AAAATCTGGCTCGGTCTTTTTGATGCTCGGACATCGTTGATACCAGATTCCAGGGATCCTCAGAAGGTGAAGGAGTTTCTCCAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS-3UTR CAA 90 bp | GGTTGTCTAGGAGAAAAAGAATGGCCAGCGGTGTTTATCTGTTTACATATGTGTTCAGTGCTGGCTTTCTaGGTGGATGAATGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCLGEKEWPAVFICLHMCSVLAF*VDEWEG Trigger: TCCTTCCCATTCATCCACCAAGAAAGCCAGCACTGA...ACACATATGTAAACAGATAAACACCGCTGGCCATTCTTTTTCTCCTAGACAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGGGACAGGATCGAAGACTGTCTTCATAATTAATAATCTGACAGAAATACTCATTTCCACGAGATaGGAGGAACAGGACTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGTGSKTVFIINNLTEILISTR*EEQDFR Trigger: CCTGAAGTCCTGTTCCTCCAATCTCGTGGAAATGAG...TATTTCTGTCAGATTATTAATTATGAAGACAGTCTTCGATCCTGTCCCTCCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
||
| CDS GCA 72 bp | GGCACCACACCTCCGAAGCGGCTTCAGCCTCCGCTTTaGTCCCTCCGACCCCGCCACCCGGGCCCGGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTTPPKRLQPPL*SLRPRHPGPGP Trigger: AGGGCCCGGGCCCGGGTGGCGGGGTCGGAGGGAGCAAAGCGGAGGCTGAAGCCGCTTCGGAGGTGTGGTGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS GCA 72 bp | GGGCGCACTCGAAACAGTGGCGGTTCCCGGCCTGGCTaGAGCCGCCCAGCTCCCGCACTCGGCGGCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: GRTRNSGGSRPG*SRPAPALGGTT Trigger: TGTGGTGCCGCCGAGTGCGGGAGCTGGGCGGCTGCAGCCAGGCCGGGAACCGCCACTGTTTCGAGTGCGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 72 bp | ACATACGTGACCCCGCGCTGGGCGCACTCGAAACAGTaGCGGTTCCCGGCCTGGCTGCAGCCGCCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TYVTPRWAHSKQ*RFPAWLQPPSS Trigger: GGAGCTGGGCGGCTGCAGCCAGGCCGGGAACCGCCACTGTTTCGAGTGCGCCCAGCGCGGGGTCACGTATGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS GCA 72 bp | GGCTGGGAGCTCCTGGCCTGCGAGCTGCTGCGTGCCTaGGACTGGCTCCCAGGCTGGCTTGAAGTGGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GWELLACELLRA*DWLPGWLEVEA Trigger: TGCTTCCACTTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS GCA 72 bp | GTGGATGAATGGGAAGGAGGCTGGGAGCTCCTGGCCTaGGAGCTGCTGCGTGCCTGCGACTGGCTCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VDEWEGGWELLA*ELLRACDWLPG Trigger: GCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCCTCCTTCCCATTCATCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 72 bp | CTGCCCACGGTGATGTCCACATACGTGACCCCGCGCTaGGCGCACTCGAAACAGTGGCGGTTCCCGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPTVMSTYVTPR*AHSKQWRFPAW Trigger: CCAGGCCGGGAACCGCCACTGTTTCGAGTGCGCCCAGCGCGGGGTCACGTATGTGGACATCACCGTGGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 72 bp | TCTTGGTGGATGAATGGGAAGGAGGCTGGGAGCTCCTaGCCTGCGAGCTGCTGCGTGCCTGCGACTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SWWMNGKEAGSS*PASCCVPATGS Trigger: GGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCAGGAGCTCCCAGCCTCCTTCCCATTCATCCACCAAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 72 bp | AGGGGTCGGCTGGGCCTGGAATGGCGCTTGGACGGATaGAGGGAGGCTTCCGAAGGTGGAAGAGCTAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGRLGLEWRLDG*REASEGGRARA Trigger: AGCCCTAGCTCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 72 bp | CTTCCTGCAGGGGTCGGCTGGGCCTGGAATGGCGCTTaGACGGATGGAGGGAGGCTTCCGAAGGTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPAGVGWAWNGA*TDGGRLPKVEE Trigger: CTCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS CCA 72 bp | AACGCAGACATCTGGCCACTTCCTGCAGGGGTCGGCTaGGCCTGGAATGGCGCTTGGACGGATGGAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NADIWPLPAGVG*AWNGAWTDGGR Trigger: CCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAGTGGCCAGATGTCTGCGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS CCA 72 bp | TTGGCTGCAGGGGTCGGCTGGGCCTGGAATGGCGCTTaGACGGATGGAGGGAGGCTTCCGAAGGTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LAAGVGWAWNGA*TDGGRLPKVEE Trigger: CTCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGCCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 72 bp | CATCCGATTGGCTGCAGGGGTCGGCTGGGCCTGGAATaGCGCTTGGACGGATGGAGGGAGGCTTCCGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HPIGCRGRLGLE*RLDGWREASEG Trigger: ACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGCCAATCGGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 72 bp | GTTAGCATCCGATTGGCTGCAGGGGTCGGCTGGGCCTaGAATGGCGCTTGGACGGATGGAGGGAGGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSIRLAAGVGWA*NGAWTDGGRLP Trigger: CGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGCCAATCGGATGCTAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS GCA 72 bp | AGCAGCCATCCTGGGACCCAGGAGGCCGCCCACATCTaGAAGGTTGTTGGGTTGACTGGCAGCTGCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSHPGTQEAAHI*KVVGLTGSCKG Trigger: CCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCAGATGTGGGCGGCCTCCTGGGTCCCAGGATGGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CCA 72 bp | CTTCCAGTTAGCATCCGATTGGCTGCAGGGGTCGGCTaGGCCTGGAATGGCGCTTGGACGGATGGAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPVSIRLAAGVG*AWNGAWTDGGR Trigger: CCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGCCAATCGGATGCTAACTGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CAA 72 bp | ACTTCCTGCAGGGGTCGGCTGGGCCTGGAATGGCGCTaGGACGGATGGAGGGAGGCTTCCGAAGGTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TSCRGRLGLEWR*DGWREASEGGR Trigger: TCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGGAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
||
| CDS CAA 72 bp | CCAGGCCCTGAGGCTAGACCATTGGGTTGGAATGGGTaGGTAGAAGGCAGCTGGGCTTGGGCAGGGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PGPEARPLGWNG*VEGSWAWAGVA Trigger: CGCCACCCCTGCCCAAGCCCAGCTGCCTTCTACCAACCCATTCCAACCCAATGGTCTAGCCTCAGGGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CAA 72 bp | ATTGGCTGCAGGGGTCGGCTGGGCCTGGAATGGCGCTaGGACGGATGGAGGGAGGCTTCCGAAGGTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IGCRGRLGLEWR*DGWREASEGGR Trigger: TCTTCCACCTTCGGAAGCCTCCCTCCATCCGTCCAAGCGCCATTCCAGGCCCAGCCGACCCCTGCAGCCAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CAA 90 bp | TGGCCTGCGAGCTGCTGCGTGCCTGCGACTGGCTCCCAGGCTGGCTaGAAGTGGAAGCAGGATCAGAGAGAGATGGCACAGGGTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPASCCVPATGSQAG*KWKQDQREMAQGLP Trigger: TGGGAGACCCTGTGCCATCTCTCTCTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCTCGCAGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
||
| CDS CCA 72 bp | CTAACACCTGGCACGGCCGACTGCAGGGCAGGAACCTaGCTCGGCATCCCAAAAACACTGCCAGGGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: LTPGTADCRAGT*LGIPKTLPGRP Trigger: AGGTCTCCCTGGCAGTGTTTTTGGGATGCCGAGCCAGGTTCCTGCCCTGCAGTCGGCCGTGCCAGGTGTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CAA 90 bp | CATCCTGGGACCCAGGAGGCCGCCCACATCTGCAAGGTTGTTGGGTaGACTGGCAGCTGCAAGGGGTGCCACACCAAACGCAGACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPGTQEAAHICKVVG*TGSCKGCHTKRRHL Trigger: CAGATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCAGATGTGGGCGGCCTCCTGGGTCCCAGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
||
| CDS CAA 90 bp | ATCCCAAAGCCAGGCCCTGAGGCTAGACCATTGGGTTGGAATGGGTaGGTAGAAGGCAGCTGGGCTTGGGCAGGGGTGGCGAAGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IPKPGPEARPLGWNG*VEGSWAWAGVAKGL Trigger: CAACCCCTTCGCCACCCCTGCCCAAGCCCAGCTGCCTTCTACCAACCCATTCCAACCCAATGGTCTAGCCTCAGGGCCTGGCTTTGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
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| CDS CAA 90 bp | GGCCGAACACTGCTCATCCCAAAGCCAGGCCCTGAGGCTAGACCATaGGGTTGGAATGGGTTGGTAGAAGGCAGCTGGGCTTGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRTLLIPKPGPEARP*GWNGLVEGSWAWAG Trigger: CCCTGCCCAAGCCCAGCTGCCTTCTACCAACCCATTCCAACCCAATGGTCTAGCCTCAGGGCCTGGCTTTGGGATGAGCAGTGTTCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS CCA 72 bp | TGCGTGCCTGCGACTGGCTCCCAGGCTGGCTTGAAGTaGAAGCAGGATCAGAGAGAGATGGCACAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CVPATGSQAGLK*KQDQREMAQGL Trigger: GAGACCCTGTGCCATCTCTCTCTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
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| CDS CCA 72 bp | CCCCGATATCCGCCAGCAGGTCAGTGCTGGCTTTCTTaGTGGATGAATGGGAAGGAGGCTGGGAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRYPPAGQCWLS*WMNGKEAGSSW Trigger: CCAGGAGCTCCCAGCCTCCTTCCCATTCATCCACCAAGAAAGCCAGCACTGACCTGCTGGCGGATATCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
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| CDS CCA 72 bp | AGGGGTCTCCCCCGATATCCGCCAGCAGGTCAGTGCTaGCTTTCTTGGTGGATGAATGGGAAGGAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RGLPRYPPAGQC*LSWWMNGKEAG Trigger: CCCAGCCTCCTTCCCATTCATCCACCAAGAAAGCCAGCACTGACCTGCTGGCGGATATCGGGGGAGACCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
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| CDS CCA 72 bp | GAGGTCCCCAAGTCGCCAAAGGAAGATCCATTCTGCTaGTCGGCCAGTCCAGCCTGTGTGGGGAACACGGGT | + |
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Preference number: 6 (lower is better) Translates to: EVPKSPKEDPFC*SASPACVGNTG Trigger: ACCCGTGTTCCCCACACAGGCTGGACTGGCCGACCAGCAGAATGGATCTTCCTTTGGCGACTTGGGGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS CAA 72 bp | AGCTGCTGCGTGCCTGCGACTGGCTCCCAGGCTGGCTaGAAGTGGAAGCAGGATCAGAGAGAGATGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SCCVPATGSQAG*KWKQDQREMAQ Trigger: CTGTGCCATCTCTCTCTGATCCTGCTTCCACTTCAAGCCAGCCTGGGAGCCAGTCGCAGGCACGCAGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
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| CDS CAA 90 bp | CTTCCGAAGGTGGAAGAGCTAGGGCTGCTGCTGAAGGCATCGAAGTaGGCAAAGCCTCCATGGGCAGGAGTCTGGCCTCCAAAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LPKVEELGLLLKASK*AKPPWAGVWPPKPG Trigger: CCCAGGCTTTGGAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAGCAGCAGCCCTAGCTCTTCCACCTTCGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151839.2 |
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| CDS TCA 72 bp | ATGGGCAGGAGTCTGGCCTACTCCAAAGCCTGGGAATaGGGCAAAGGCTGGCACCACCTGGGGAGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MGRSLAYSKAWE*GKGWHHLGSSK Trigger: TTTGCTGCTCCCCAGGTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGAGTAGGCCAGACTCCTGCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS TCA 72 bp | CGCAGACATCTGGCCACTTCCTCCAAAGCCTGGGAATaGGGCAAAGGCTGGCACCACCTGGGGAGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RRHLATSSKAWE*GKGWHHLGSSK Trigger: TTTGCTGCTCCCCAGGTGGTGCCAGCCTTTGCCTCATTCCCAGGCTTTGGAGGAAGTGGCCAGATGTCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198657.2 |
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| CDS GCA 72 bp | GCCCACATCTGCAAGGTTGTTGGGTTGACTGGCAGCTaGAAGGGGTGCCACACCAAACGCAGACATCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: AHICKVVGLTGS*KGCHTKRRHLA Trigger: GGCCAGATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCAGATGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
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| CDS CCA 72 bp | AGAGAGATGGCACAGGGTCTCCCAGAAGTGTCCGAATaGGTTTCCCTTCTGGGACAGAGCCCTGGACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: REMAQGLPEVSE*VSLLGQSPGQG Trigger: CCCCTGTCCAGGGCTCTGTCCCAGAAGGGAAACCCATTCGGACACTTCTGGGAGACCCTGTGCCATCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 ENSMUST00000198657.2 |
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| CDS CCA 72 bp | AAGATCCATTCTGCTGGTCGGCCAGTCCAGCCTGTGTaGGGAACACGGGTGCAGAGAAGGGACTGGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: KIHSAGRPVQPV*GTRVQRRDWQR Trigger: CCTTTGCCAGTCCCTTCTCTGCACCCGTGTTCCCCACACAGGCTGGACTGGCCGACCAGCAGAATGGATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS CAA 90 bp | CTTCCGAAGGTGGAAGAGCTAGGGCTGCTGCTGAAGGCATCGAAGTaGGCAAAGCCTCCATGGGCAGGAGTCTGGCCTACTCCAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPKVEELGLLLKASK*AKPPWAGVWPTPKP Trigger: AGGCTTTGGAGTAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAGCAGCAGCCCTAGCTCTTCCACCTTCGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS GCA 72 bp | TGCAAGGTTGTTGGGTTGACTGGCAGCTGCAAGGGGTaGCACACCAAACGCAGACATCTGGCCACTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CKVVGLTGSCKG*HTKRRHLATSC Trigger: GCAGGAAGTGGCCAGATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031736.16 |
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| CDS GCA 72 bp | TGCAAGGTTGTTGGGTTGACTGGCAGCTGCAAGGGGTaGCACACCAAACGCAGACATCTGGCCACTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CKVVGLTGSCKG*HTKRRHLATSS Trigger: GGAGGAAGTGGCCAGATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198657.2 |
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| CDS CCA 72 bp | ATCCCAAAGCCAGGCCCTGAGGCTAGACCATTGGGTTaGAATGGGTTGGTAGAAGGCAGCTGGGCTTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: IPKPGPEARPLG*NGLVEGSWAWA Trigger: TGCCCAAGCCCAGCTGCCTTCTACCAACCCATTCCAACCCAATGGTCTAGCCTCAGGGCCTGGCTTTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
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| CDS CCA 72 bp | CTGCTGCTGAAGGCATCGAAGTTGGCAAAGCCTCCATaGGCAGGAGTCTGGCCTCCAAAGCCTGGGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLKASKLAKPP*AGVWPPKPGNE Trigger: CTCATTCCCAGGCTTTGGAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAGCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151839.2 |
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| CDS CAA 72 bp | CTGCTCATCCCAAAGCCAGGCCCTGAGGCTAGACCATaGGGTTGGAATGGGTTGGTAGAAGGCAGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLIPKPGPEARP*GWNGLVEGSWA Trigger: AGCCCAGCTGCCTTCTACCAACCCATTCCAACCCAATGGTCTAGCCTCAGGGCCTGGCTTTGGGATGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS CCA 72 bp | CTGCTGCTGAAGGCATCGAAGTTGGCAAAGCCTCCATaGGCAGGAGTCTGGCCTACTCCAAAGCCTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: LLLKASKLAKPP*AGVWPTPKPGN Trigger: ATTCCCAGGCTTTGGAGTAGGCCAGACTCCTGCCCATGGAGGCTTTGCCAACTTCGATGCCTTCAGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS GCA 72 bp | TGCAAGGTTGTTGGGTTGACTGGCAGCTGCAAGGGGTaGCACACCAAACGCAGACATCTGGCCACTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: CKVVGLTGSCKG*HTKRRHLATSK Trigger: TTTGGAAGTGGCCAGATGTCTGCGTTTGGTGTGGCACCCCTTGCAGCTGCCAGTCAACCCAACAACCTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100544.11 ENSMUST00000151839.2 |
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| CDS TCA 72 bp | GAATGGGTTTGTGGTTGGAGGTTTGGAGGCAAACGCTaGGGATCCAGTCATGAAAGGATTGGTAGAGATCCC | + |
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Preference number: 6 (lower is better) Translates to: EWVCGWRFGGKR*GSSHERIGRDP Trigger: GGGATCTCTACCAATCCTTTCATGACTGGATCCTCAGCGTTTGCCTCCAAACCTCCAACCACAAACCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 |
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| CDS CCA 72 bp | GAGAAACTCCTTCACCTTCTGAGGATCCCTGGAATCTaGTATCAACGATGTCCGAGCATCAAAAAGACCGAG | + |
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Preference number: 6 (lower is better) Translates to: EKLLHLLRIPGI*YQRCPSIKKTE Trigger: CTCGGTCTTTTTGATGCTCGGACATCGTTGATACCAGATTCCAGGGATCCTCAGAAGGTGAAGGAGTTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
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| CDS CCA 72 bp | TTTCTTGGAGAAACTCCTTCACCTTCTGAGGATCCCTaGAATCTGGTATCAACGATGTCCGAGCATCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: FLGETPSPSEDP*NLVSTMSEHQK Trigger: TTTTTGATGCTCGGACATCGTTGATACCAGATTCCAGGGATCCTCAGAAGGTGAAGGAGTTTCTCCAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
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| CDS TCA 72 bp | TTCTCATATTTTTCTTGGAGAAACTCCTTCACCTTCTaGGGATCCCTGGAATCTGGTATCAACGATGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: FSYFSWRNSFTF*GSLESGINDVR Trigger: TCGGACATCGTTGATACCAGATTCCAGGGATCCTCAGAAGGTGAAGGAGTTTCTCCAAGAAAAATATGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031736.16 ENSMUST00000100544.11 ENSMUST00000151839.2 |
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