RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGFG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026159

Ensembl transcript IDs: ENSMUST00000063380.11, ENSMUST00000113444.8, ENSMUST00000186043.2, ENSMUST00000186302.7, ENSMUST00000187899.7, ENSMUST00000189220.7, ENSMUST00000190046.7, ENSMUST00000190052.7

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGCAAAGGACATCCACTCCTGGATCCTGATGCCATTCACACAATaGGATAGTGCTGCACATGGCAAATGGAAAGGTGTCCACGTTAAA +
Preference number: 1 (lower is better)
Translates to: PAKDIHSWILMPFTQ*DSAAHGKWKGVHVK
Trigger: TTTAACGTGGACACCTTTCCATTTGCCATGTGCAGCACTATCTCATTGTGTGAATGGCATCAGGATCCAGGAGTGGATGTCCTTTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR TCA 90 bp ATACGTGCAAAAATGTTCCTGCAAAGGACATCCACTCCTGGATCCTaGTGCCATTCACACAATGAGATAGTGCTGCACATGGCAAATGGA +
Preference number: 1 (lower is better)
Translates to: IRAKMFLQRTSTPGS*CHSHNEIVLHMANG
Trigger: TCCATTTGCCATGTGCAGCACTATCTCATTGTGTGAATGGCATCAGGATCCAGGAGTGGATGTCCTTTGCAGGAACATTTTTGCACGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 90 bp GATTTCACAACAATGGGCTCAACTACAGGCATAAACCATGCAGAATaGGTAAGATATCAGATAGACCTTCTCGGCAGAAGTCTTCACTGG +
Preference number: 1 (lower is better)
Translates to: DFTTMGSTTGINHAE*VRYQIDLLGRSLHW
Trigger: CCAGTGAAGACTTCTGCCGAGAAGGTCTATCTGATATCTTACCCATTCTGCATGGTTTATGCCTGTAGTTGAGCCCATTGTTGTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 90 bp AAGGACAGATTTCACAACAATGGGCTCAACTACAGGCATAAACCATaGAGAATGGGTAAGATATCAGATAGACCTTCTCGGCAGAAGTCT +
Preference number: 1 (lower is better)
Translates to: KDRFHNNGLNYRHKP*RMGKISDRPSRQKS
Trigger: AGACTTCTGCCGAGAAGGTCTATCTGATATCTTACCCATTCTGCATGGTTTATGCCTGTAGTTGAGCCCATTGTTGTGAAATCTGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 90 bp CATCTTTTCTTCAGAGATGGCTGTGAAACACCCACCACACAGGCCTaGTTACGCTCACATCTTCATTTGTTCAAACACAACCATACAAAA +
Preference number: 1 (lower is better)
Translates to: HLFFRDGCETPTTQA*LRSHLHLFKHNHTK
Trigger: TTTTGTATGGTTGTGTTTGAACAAATGAAGATGTGAGCGTAACCAGGCCTGTGTGGTGGGTGTTTCACAGCCATCTCTGAAGAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 90 bp ATCCAGAAGCTTGGTAAAACTAATCAGAGAAAAGGACATTTCTGTTaGAAGCAGACACAGATAGAGGAGCATCTTTCCATCTCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: IQKLGKTNQRKGHFC*KQTQIEEHLSISQA
Trigger: TGCCTGGGAGATGGAAAGATGCTCCTCTATCTGTGTCTGCTTCCAACAGAAATGTCCTTTTCTCTGATTAGTTTTACCAAGCTTCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 90 bp ACTTCTTTCATGTTTAAAGCTAAGATCAGTGAAACAAGACAACAGTaGAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTC +
Preference number: 1 (lower is better)
Translates to: TSFMFKAKISETRQQ*KRRRDVIWSHKRSF
Trigger: GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCTTGTTTCACTGATCTTAGCTTTAAACATGAAAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR-3UTR GCA 90 bp GCAGATCCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAAAGTACAGTTTCCAGTaGCTCCCTGCTGTGGTACCT +
Preference number: 2 (lower is better)
Translates to: ADPLLFVSMAAFQDPRPLKYSFQ*LPAVVP
Trigger: AGGTACCACAGCAGGGAGGCACTGGAAACTGTACTT...TAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGGATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR GCA 90 bp CCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAGTAAAAGCCTTTGGCAGGACGTaGTTTCCATCCTTGTTCTGG +
Preference number: 2 (lower is better)
Translates to: PLLFVSMAAFQDPRPLVKAFGRT*FPSLFW
Trigger: CCAGAACAAGGATGGAAAGCACGTCCTGCCAAAGGC...TTTTACTAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CCA 90 bp GCAGATCCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAAGTGCCTCCCTGCTGTaGTACCTGAAAAGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: ADPLLFVSMAAFQDPRPLSASLL*YLKSLN
Trigger: ATTCAGACTTTTCAGGTACCACAGCAGGGAGGCACT...TAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR TCA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGGCAGGAAGTGTGCTGTaGGCACTGAGCCCACACTGT +
Preference number: 2 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQAGSVL*ALSPHC
Trigger: ACAGTGTGGGCTCAGTGCTCACAGCACACTTCCTGC...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CCA 90 bp CAGAACAGTCCCTCCACCCCCACTTCATTATACACCTCAGAGCTTTTTGAAAAAAGATGGAAAGCCTGGTaGGTCATCTGGGTAATGGCC +
Preference number: 2 (lower is better)
Translates to: QNSPSTPTSLYTSELFEKRWKAW*VIWVMA
Trigger: GGCCATTACCCAGATGACCCACCAGGCTTTCCATCT...TTTTTCAAAAAGCTCTGAGGTGTATAATGAAGTGGGGGTGGAGGGACTGTTCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR TCA 90 bp GCAGATCCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAAACTGTAGCAAAACATaGTCAGCTTTATTCCGCAGA +
Preference number: 2 (lower is better)
Translates to: ADPLLFVSMAAFQDPRPLNCSKT*SALFRR
Trigger: TCTGCGGAATAAAGCTGATCATGTTTTGCTACAGTT...TAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR TCA 90 bp AATGAGATAGTGCTGCACATGGCAAATGGAAAGGTGTCCACGTTAAAACAAAGGCTGCCAATTCACAAGTaGAAAGTTGTTGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: NEIVLHMANGKVSTLKQRLPIHK*KVVAEP
Trigger: GGGCTCAGCAACAACTTTTCACTTGTGAATTGGCAG...CCTTTGTTTTAACGTGGACACCTTTCCATTTGCCATGTGCAGCACTATCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CCA 90 bp CCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAGTAAAATTTCCATCCTTGTTCTaGACCCTTCCTTTCGTTAAC +
Preference number: 2 (lower is better)
Translates to: PLLFVSMAAFQDPRPLVKFPSLF*TLPFVN
Trigger: GTTAACGAAAGGAAGGGTCCAGAACAAGGATGGAAA...TTTTACTAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR TCA 90 bp AACAATGATTTCAACTGGAATTTCACCAAAGGAAACAACCCCTTAAGTTCAGAAACTGAGCCCACACTGTaGAGACCCTCAGCCATCACT +
Preference number: 2 (lower is better)
Translates to: NNDFNWNFTKGNNPLSSETEPTL*RPSAIT
Trigger: AGTGATGGCTGAGGGTCTTCACAGTGTGGGCTCAGT...TTCTGAACTTAAGGGGTTGTTTCCTTTGGTGAAATTCCAGTTGAAATCATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR GCA 90 bp CAGAACAGTCCCTCCACCCCCACTTCATTATACACCTCAGAGCTTTTTGAAAAACTGAGCCCTCTGTTTTaGACATATTACCTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: QNSPSTPTSLYTSELFEKLSPLF*TYYLVF
Trigger: AAACACCAGGTAATATGTGCAAAACAGAGGGCTCAG...TTTTTCAAAAAGCTCTGAGGTGTATAATGAAGTGGGGGTGGAGGGACTGTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR GCA 90 bp CAGAACAGTCCCTCCACCCCCACTTCATTATACACCTCAGAGCTTTTTGAAAAACCATGTCACAGTCAATaGATGTCTGCTTCCAATACA +
Preference number: 2 (lower is better)
Translates to: QNSPSTPTSLYTSELFEKPCHSQ*MSASNT
Trigger: TGTATTGGAAGCAGACATGCATTGACTGTGACATGG...TTTTTCAAAAAGCTCTGAGGTGTATAATGAAGTGGGGGTGGAGGGACTGTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CCA 90 bp CCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAGTAAAAAATTTACTCAATAGATaGAAAGCCTGGTGGGTCATC +
Preference number: 2 (lower is better)
Translates to: PLLFVSMAAFQDPRPLVKNLLNR*KAWWVI
Trigger: GATGACCCACCAGGCTTTCCATCTATTGAGTAAATT...TTTTACTAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CAA 90 bp TGTGAAACACCCACCACACAGGCCTGGTTACGCTCACATCTTCATTaGTTCAAACACAACCATACAAAAAGCAAAGTAATAACACCGCTT +
Preference number: 2 (lower is better)
Translates to: CETPTTQAWLRSHLH*FKHNHTKSKVITPL
Trigger: AAGCGGTGTTATTACTTTGCTTTTTGTATGGTTGTGTTTGAACAAATGAAGATGTGAGCGTAACCAGGCCTGTGTGGTGGGTGTTTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR GCA 90 bp AATGAGATAGTGCTGCACATGGCAAATGGAAAGGTGTCCACGTTAAAACAAAGGAGCTTGTTTCATAAATaGCAGCACAGTGACTGTCTG +
Preference number: 2 (lower is better)
Translates to: NEIVLHMANGKVSTLKQRSLFHK*QHSDCL
Trigger: CAGACAGTCACTGTGCTGGCATTTATGAAACAAGCT...CCTTTGTTTTAACGTGGACACCTTTCCATTTGCCATGTGCAGCACTATCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR GCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATCCATGTCACAGTCAATaGATGTCTGCTTCCAATACA +
Preference number: 2 (lower is better)
Translates to: DERARLSWDERGITTYKYPCHSQ*MSASNT
Trigger: TGTATTGGAAGCAGACATGCATTGACTGTGACATGG...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR-3UTR CCA 90 bp AACAATGATTTCAACTGGAATTTCACCAAAGGAAACAACCCCTTAAGTTCAGAAAATAGATGGAAAGCCTaGTGGGTCATCTGGGTAATG +
Preference number: 2 (lower is better)
Translates to: NNDFNWNFTKGNNPLSSENRWKA*WVIWVM
Trigger: CATTACCCAGATGACCCACCAGGCTTTCCATCTATT...TTCTGAACTTAAGGGGTTGTTTCCTTTGGTGAAATTCCAGTTGAAATCATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR TCA 90 bp TACTTGTTTAAGATTGTGACTCAGACAACAAGTGCTCAAGACTCTGGAGAACAAGAATTGATTTGGATCTaGCACAATCTCAAACCAAAG +
Preference number: 2 (lower is better)
Translates to: YLFKIVTQTTSAQDSGEQELIWI*HNLKPK
Trigger: CTTTGGTTTGAGATTGTGTCAGATCCAAATCAATTC...TTGTTCTCCAGAGTCTTGAGCACTTGTTGTCTGAGTCACAATCTTAAACAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CAA 90 bp GTTCAAGATGTTCTCAACTCACTACTCATTACATTTAAGGCCACTTaGGTAAAGGCATTGCAGCAAGAACACAAAAACAATAGCATATTT +
Preference number: 2 (lower is better)
Translates to: VQDVLNSLLITFKAT*VKALQQEHKNNSIF
Trigger: AAATATGCTATTGTTTTTGTGTTCTTGCTGCAATGCCTTTACCAAAGTGGCCTTAAATGTAATGAGTAGTGAGTTGAGAACATCTTGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR TCA 72 bp ACAGCCCACAGAAGCCAGCCCCTGACTACTGCCCTTTaGACTTCCCTCACTCCTACCCTCCACATGCAGAGG +
Preference number: 3 (lower is better)
Translates to: TAHRSQPLTTAL*TSLTPTLHMQR
Trigger: CCTCTGCATGTGGAGGGTAGGAGTGAGGGAAGTTCAAAGGGCAGTAGTCAGGGGCTGGCTTCTGTGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CAA 90 bp CAGTTCTGGGGTCACACACCAGGGCTATGCTGCAGCTGTCTAGCGCAGGCTCAGACGTGCTTTCCATCCTaGTTCTGGACCCTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: QFWGHTPGLCCSCLAQAQTCFPS*FWTLPF
Trigger: GAAAGGAAGGGTCCAGAACAAGGATGGAAAGCACGT...CTGAGCCTGCGCTAGACAGCTGCAGCATAGCCCTGGTGTGTGACCCCAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 72 bp TGGGCTGGCTGTCCCTACGGAGCCTTTGGCAGGACGTaGTTTCCATCCTTGTTCTGGACCCTTCCTTTCGTT +
Preference number: 3 (lower is better)
Translates to: WAGCPYGAFGRT*FPSLFWTLPFV
Trigger: AACGAAAGGAAGGGTCCAGAACAAGGATGGAAAGCACGTCCTGCCAAAGGCTCCGTAGGGACAGCCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp TCTCACCCCACTACTCTACAGTGGGCTGGCTGGGTGTaGTGGCAGAGGCAGATGATTTCTGTGAGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: SHPTTLQWAGWV*WQRQMISVSLR
Trigger: CCTCAGACTCACAGAAATCATCTGCCTCTGCCACCACACCCAGCCAGCCCACTGTAGAGTAGTGGGGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp TGCCAAGCTGTTCCATCTCACCCCACTACTCTACAGTaGGCTGGCTGGGTGTGGTGGCAGAGGCAGATGATT +
Preference number: 3 (lower is better)
Translates to: CQAVPSHPTTLQ*AGWVWWQRQMI
Trigger: AATCATCTGCCTCTGCCACCACACCCAGCCAGCCCACTGTAGAGTAGTGGGGTGAGATGGAACAGCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp GTCAGGAGCCCTTTGCAAGCGCATGCTCTGCTCCTGTaGGATCTGAACCCAGTTCTAGGAGTTCTCTACCGG +
Preference number: 3 (lower is better)
Translates to: VRSPLQAHALLL*DLNPVLGVLYR
Trigger: CCGGTAGAGAACTCCTAGAACTGGGTTCAGATCCCACAGGAGCAGAGCATGCGCTTGCAAAGGGCTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 72 bp TCCAAACACAGCCCACAGAAGCCAGCCCCTGACTACTaGCCTTTGAACTTCCCTCACTCCTACCCTCCACAT +
Preference number: 3 (lower is better)
Translates to: SKHSPQKPAPDY*PLNFPHSYPPH
Trigger: ATGTGGAGGGTAGGAGTGAGGGAAGTTCAAAGGGCAGTAGTCAGGGGCTGGCTTCTGTGGGCTGTGTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp GTTCCATCTCACCCCACTACTCTACAGTGGGCTGGCTaGGTGTGGTGGCAGAGGCAGATGATTTCTGTGAGT +
Preference number: 3 (lower is better)
Translates to: VPSHPTTLQWAG*VWWQRQMISVS
Trigger: ACTCACAGAAATCATCTGCCTCTGCCACCACACCCAGCCAGCCCACTGTAGAGTAGTGGGGTGAGATGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp AGCTGTTCCATCTCACCCCACTACTCTACAGTGGGCTaGCTGGGTGTGGTGGCAGAGGCAGATGATTTCTGT +
Preference number: 3 (lower is better)
Translates to: SCSISPHYSTVG*LGVVAEADDFC
Trigger: ACAGAAATCATCTGCCTCTGCCACCACACCCAGCCAGCCCACTGTAGAGTAGTGGGGTGAGATGGAACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR TCA 72 bp CTGAGCCCACACTGTGAAGACCCTCAGCCATCACTCTaGGCACTACCCTTTCAATGCTCAACACAGTGCCGA +
Preference number: 3 (lower is better)
Translates to: LSPHCEDPQPSL*ALPFQCSTQCR
Trigger: TCGGCACTGTGTTGAGCATTGAAAGGGTAGTGCTCAGAGTGATGGCTGAGGGTCTTCACAGTGTGGGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR TCA 72 bp AACATTTTCCAAACACAGCCCACAGAAGCCAGCCCCTaGCTACTGCCCTTTGAACTTCCCTCACTCCTACCC +
Preference number: 3 (lower is better)
Translates to: NIFQTQPTEASP*LLPFELPSLLP
Trigger: GGGTAGGAGTGAGGGAAGTTCAAAGGGCAGTAGTCAGGGGCTGGCTTCTGTGGGCTGTGTTTGGAAAATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 72 bp GACTACATAAATAAAGGTAAGCCGTCCCATGCAATGTaGCACTGTCAGCCTGAGGTGCCAAGCTGTTCCATC +
Preference number: 3 (lower is better)
Translates to: DYINKGKPSHAM*HCQPEVPSCSI
Trigger: GATGGAACAGCTTGGCACCTCAGGCTGACAGTGGCACATTGCATGGGACGGCTTACCTTTATTTATGTAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 72 bp CTACGAAGACAAGGAAGAGGAAGTAGCCCCCTGACGTaGAGAGGGAAACATTCTGCATTTACCTTCTACCCT +
Preference number: 3 (lower is better)
Translates to: LRRQGRGSSPLT*RGKHSAFTFYP
Trigger: AGGGTAGAAGGTAAATGCAGAATGTTTCCCTCTGCACGTCAGGGGGCTACTTCCTCTTCCTTGTCTTCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 72 bp TTCTCACCATCTGGATTCCACAAGTACAGTTTCCAGTaGCTCCCTGCTGTGGTACCTGAAAAGTCTGAATGC +
Preference number: 3 (lower is better)
Translates to: FSPSGFHKYSFQ*LPAVVPEKSEC
Trigger: GCATTCAGACTTTTCAGGTACCACAGCAGGGAGGCACTGGAAACTGTACTTGTGGAATCCAGATGGTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CAA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGGTCCCTACGGAGCCTTaGGCAGGACGTGCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQVPTEP*AGRAFH
Trigger: ATGGAAAGCACGTCCTGCCAAAGGCTCCGTAGGGAC...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp GGAGCCTTTGGCAGGACGTGCTTTCCATCCTTGTTCTaGACCCTTCCTTTCGTTAACATTAATATGCTATGG +
Preference number: 3 (lower is better)
Translates to: GAFGRTCFPSLF*TLPFVNINMLW
Trigger: CCATAGCATATTAATGTTAACGAAAGGAAGGGTCCAGAACAAGGATGGAAAGCACGTCCTGCCAAAGGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp ACTAATTCTAAGGTGGTTTGTGCCTTTCTCACCATCTaGATTCCACAAGTACAGTTTCCAGTGCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: TNSKVVCAFLTI*IPQVQFPVPPC
Trigger: GCAGGGAGGCACTGGAAACTGTACTTGTGGAATCCAGATGGTGAGAAAGGCACAAACCACCTTAGAATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR TCA 72 bp AAAATGTTCCTGCAAAGGACATCCACTCCTGGATCCTaGTGCCATTCACACAATGAGATAGTGCTGCACATG +
Preference number: 3 (lower is better)
Translates to: KMFLQRTSTPGS*CHSHNEIVLHM
Trigger: CATGTGCAGCACTATCTCATTGTGTGAATGGCATCAGGATCCAGGAGTGGATGTCCTTTGCAGGAACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp GATTCCACAAGTACAGTTTCCAGTGCCTCCCTGCTGTaGTACCTGAAAAGTCTGAATGCAAGTAGTATGACT +
Preference number: 3 (lower is better)
Translates to: DSTSTVSSASLL*YLKSLNASSMT
Trigger: AGTCATACTACTTGCATTCAGACTTTTCAGGTACCACAGCAGGGAGGCACTGGAAACTGTACTTGTGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp CATTCCGTTTTCATTGACCTCCACAGATCTAGGTACTaGACAAGGACAGATTTCACAACAATGGGCTCAACT +
Preference number: 3 (lower is better)
Translates to: HSVFIDLHRSRY*TRTDFTTMGST
Trigger: AGTTGAGCCCATTGTTGTGAAATCTGTCCTTGTCCAGTACCTAGATCTGTGGAGGTCAATGAAAACGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 72 bp CCAAAATGTACAAAGAGTTCAAGACTATGCCCAAAATaGAGGCAAGCCTCAACAACACCAGCTAGATTCTCA +
Preference number: 3 (lower is better)
Translates to: PKCTKSSRLCPK*RQASTTPARFS
Trigger: TGAGAATCTAGCTGGTGTTGTTGAGGCTTGCCTGCATTTTGGGCATAGTCTTGAACTCTTTGTACATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR GCA 72 bp TTTCACAACAATGGGCTCAACTACAGGCATAAACCATaGAGAATGGGTAAGATATCAGATAGACCTTCTCGG +
Preference number: 3 (lower is better)
Translates to: FHNNGLNYRHKP*RMGKISDRPSR
Trigger: CCGAGAAGGTCTATCTGATATCTTACCCATTCTGCATGGTTTATGCCTGTAGTTGAGCCCATTGTTGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR TCA 72 bp GATTTATTTTGTTCACCTGCAAACTGTAGCAAAACATaGTCAGCTTTATTCCGCAGACAGGTGTCCTCCACA +
Preference number: 3 (lower is better)
Translates to: DLFCSPANCSKT*SALFRRQVSST
Trigger: TGTGGAGGACACCTGTCTGCGGAATAAAGCTGATCATGTTTTGCTACAGTTTGCAGGTGAACAAAATAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR CCA 72 bp CTCGTGGGAATGAGGAGATTCACAATACTGACAAACTaGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: LVGMRRFTILTN*KRKLSSCSFRN
Trigger: GTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTGTCAGTATTGTGAATCTCCTCATTCCCACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGCTGAGCCCTCTGTTTaGCACATATTACCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: NISQFLTYMMPLPFPANSAEPSV*HILPGV
Trigger: AACACCAGGTAATATGTGCAAAACAGAGGGCTCAGC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR-3UTR CAA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGGTTAAAGTAGGCCTTTaGCAGTCTGAGAATTCAAGA +
Preference number: 3 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQVKVGL*QSENSR
Trigger: TCTTGAATTCTCAGACTGCAAAAGGCCTACTTTAAC...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp AGACCACTAGTAAAAATAAGCCTGCTACTACAAAGCTaGTTCCTTCATCTTTTCTTCAGAGATGGCTGTGAA +
Preference number: 3 (lower is better)
Translates to: RPLVKISLLLQS*FLHLFFRDGCE
Trigger: TTCACAGCCATCTCTGAAGAAAAGATGAAGGAACCAGCTTTGTAGTAGCAGGCTTATTTTTACTAGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CCA 72 bp CTTGGTAAAACTAATCAGAGAAAAGGACATTTCTGTTaGAAGCAGACACAGATAGAGGAGCATCTTTCCATC +
Preference number: 3 (lower is better)
Translates to: LGKTNQRKGHFC*KQTQIEEHLSI
Trigger: GATGGAAAGATGCTCCTCTATCTGTGTCTGCTTCCAACAGAAATGTCCTTTTCTCTGATTAGTTTTACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR-3UTR CAA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATGTTAAAGTAGGCCTTTaGCAGTCTGAGAATTCAAGA +
Preference number: 3 (lower is better)
Translates to: DERARLSWDERGITTYKYVKVGL*QSENSR
Trigger: TCTTGAATTCTCAGACTGCAAAAGGCCTACTTTAAC...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR TCA 72 bp GGTGTCCTCCACATCTTTAAAGAACTTAGCCGTGTATaGATAGAAGAGCTCTTGAGAAGGAAAAATTCAAGA +
Preference number: 3 (lower is better)
Translates to: GVLHIFKELSRV*IEELLRRKNSR
Trigger: TCTTGAATTTTTCCTTCTCAAGAGCTCTTCTATTCATACACGGCTAAGTTCTTTAAAGATGTGGAGGACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR CCA 72 bp GTTGTATTTGGTTTTGATGAAAGGGCCAGATTATCCTaGGATGAACGAGGCATTACTACATATAAATATTTA +
Preference number: 3 (lower is better)
Translates to: VVFGFDERARLS*DERGITTYKYL
Trigger: TAAATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATCAAAACCAAATACAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CAGTTCTGGGGTCACACACCAGGGCTATGCTGCAGCTGTCTAGCGCAGGCTCAGCCTGAAATAGACGCATaGACCGAGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: QFWGHTPGLCCSCLAQAQPEIDA*TEATTL
Trigger: CAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGG...CTGAGCCTGCGCTAGACAGCTGCAGCATAGCCCTGGTGTGTGACCCCAGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CAA 72 bp AAGCTGCCCGAGGAAGGACATGGAGTCAGGAGCCCTTaGCAAGCGCATGCTCTGCTCCTGTGGGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: KLPEEGHGVRSP*QAHALLLWDLN
Trigger: GTTCAGATCCCACAGGAGCAGAGCATGCGCTTGCAAAGGGCTCCTGACTCCATGTCCTTCCTCGGGCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CAA 72 bp CACAGCCCACAGAAGCCAGCCCCTGACTACTGCCCTTaGAACTTCCCTCACTCCTACCCTCCACATGCAGAG +
Preference number: 4 (lower is better)
Translates to: HSPQKPAPDYCP*NFPHSYPPHAE
Trigger: CTCTGCATGTGGAGGGTAGGAGTGAGGGAAGTTCAAAGGGCAGTAGTCAGGGGCTGGCTTCTGTGGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTGCCGGAGCAGGAGGTaGACACGAACGAGCCGACCG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVCRSRR*TRTSRP
Trigger: CGGTCGGCTCGTTCGTGTGCACCTCCTGCTCCGGCA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGTGCCGGAGCAGGAGGTaGACACGAACGAGCCGACCG +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRCRSRR*TRTSRP
Trigger: CGGTCGGCTCGTTCGTGTGCACCTCCTGCTCCGGCA...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp CAGTTCTGGGGTCACACACCAGGGCTATGCTGCAGCTGTCTAGCGCAGGCTCAGATGCACTTGAATGACTaGGAACTGAAACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: QFWGHTPGLCCSCLAQAQMHLND*ELKPQN
Trigger: GTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCAT...CTGAGCCTGCGCTAGACAGCTGCAGCATAGCCCTGGTGTGTGACCCCAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp GCAGATCCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTACCAAAACCACTCCCTTaGTCACCTCCTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ADPLLFVSMAAFQDPRPLPKPLP*SPPCPA
Trigger: TGCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGG...TAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGAGGTGCTTCTCCTCCTaGTTCCGCTTCGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRRCFSS*FRFALA
Trigger: GGCCAGCGCGAAGCGGAAGCAGGAGGAGAAGCACCT...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCTGCCGGAGCAGGAGGTaGACACGAACGAGCCGACCG +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFCRSRR*TRTSRP
Trigger: CGGTCGGCTCGTTCGTGTGCACCTCCTGCTCCGGCA...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTCCTGCTGCTGCCCTTaGGAGCGACCTACAACTGGG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVSCCCP*ERPTTG
Trigger: CCCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCAGGTGCTTCTCCTCCTaGTTCCGCTTCGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFRCFSS*FRFALA
Trigger: GGCCAGCGCGAAGCGGAAGCAGGAGGAGAAGCACCT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCTGCTGAGGGAAAGCTaGTTGGGCTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRLLRES*LGWEGR
Trigger: CCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAGCAG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CAGAACAGTCCCTCCACCCCCACTTCATTATACACCTCAGAGCTTTTTGAAAAACTGCTGAGGGAAAGCTaGTTGGGCTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QNSPSTPTSLYTSELFEKLLRES*LGWEGR
Trigger: CCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAGCAG...TTTTTCAAAAAGCTCTGAGGTGTATAATGAAGTGGGGGTGGAGGGACTGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTGCTGAGGGAAAGCTaGTTGGGCTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLLRES*LGWEGR
Trigger: CCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAGCAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCAGATCCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAAGACACTCCAGCAGCTaGTACTTGACCGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: ADPLLFVSMAAFQDPRPLRHSSS*YLTERG
Trigger: ACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCT...TAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGTCATGTTCACGTAGGTaGGGCCGCGCTGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRSCSRR*GRAGRS
Trigger: ACTGCGACCAGCGCGGCCCCACCTACGTGAACATGA...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTCATGTTCACGTAGGTaGGGCCGCGCTGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVSCSRR*GRAGRS
Trigger: ACTGCGACCAGCGCGGCCCCACCTACGTGAACATGA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVRSRTT*SRLCLS
Trigger: GCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCGCAGCATCTTCAGGTaGTTCTCCTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRRSIFR*FSSCFR
Trigger: GCGGAAGCAGGAGGAGAAGCACCTGAAGATGCTGCG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCGCAGCATCTTCAGGTaGTTCTCCTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVRSIFR*FSSCFR
Trigger: GCGGAAGCAGGAGGAGAAGCACCTGAAGATGCTGCG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCTGCTGAGGGAAAGCTaGTTGGGCTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFLLRES*LGWEGR
Trigger: CCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAGCAG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCAGCACTTCCACTGTaGGCAGCCTGGAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPALPL*AAWRGK
Trigger: CTTTCCTCTCCAGGCTGCCCACAGTGGAAGTGCTGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190046.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFRSRTT*SRLCLS
Trigger: GCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGGAAAAGGCTGTCTGCTaGGGGAAAGCTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCREKAVC*GKAAWA
Trigger: AGCCCAAGCAGCTTTCCCTCAGCAGACAGCCTTTTC...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGAAAAGGCTGTCTGCTaGGGGAAAGCTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVEKAVC*GKAAWA
Trigger: AGCCCAAGCAGCTTTCCCTCAGCAGACAGCCTTTTC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCCAGCAGCTGCTACTTaGCCGAAAGGGGTTACCACT +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRPAAAT*PKGVTT
Trigger: AGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCAGCAGCTGCTACTTaGCCGAAAGGGGTTACCACT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPAAAT*PKGVTT
Trigger: AGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCAAAACCACTCCCTTaGTCACCTCCTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPKPLP*SPPCPA
Trigger: TGCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAGGTGCTTCTCCTCCTaGTTCCGCTTCGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTRCFSS*FRFALA
Trigger: GGCCAGCGCGAAGCGGAAGCAGGAGGAGAAGCACCT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATAGGTGCTTCTCCTCCTaGTTCCGCTTCGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYRCFSS*FRFALA
Trigger: GGCCAGCGCGAAGCGGAAGCAGGAGGAGAAGCACCT...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AATGAGATAGTGCTGCACATGGCAAATGGAAAGGTGTCCACGTTAAAACAAAGGCGCAGCATCTTCAGGTaGTTCTCCTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: NEIVLHMANGKVSTLKQRRSIFR*FSSCFR
Trigger: GCGGAAGCAGGAGGAGAAGCACCTGAAGATGCTGCG...CCTTTGTTTTAACGTGGACACCTTTCCATTTGCCATGTGCAGCACTATCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTGCCGGAGCAGGAGGTaGACACGAACGAGCCGACCG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFCRSRR*TRTSRP
Trigger: CGGTCGGCTCGTTCGTGTGCACCTCCTGCTCCGGCA...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGTGCCGGAGCAGGAGGTaGACACGAACGAGCCGACCG +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMCRSRR*TRTSRP
Trigger: CGGTCGGCTCGTTCGTGTGCACCTCCTGCTCCGGCA...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGCTGGGAAGGCAGGCTaGTGGAAACTGCCACTAAAG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVAGKAG*WKLPLK
Trigger: CTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCCAGC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGGGAAGGCAGGCTGCTaGAAACTGCCACTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVGKAGC*KLPLKL
Trigger: CAGCTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCACTGTGGGCAGCCTaGAGAGGAAAGGCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPLWAA*RGKAEV
Trigger: TACTTCAGCCTTTCCTCTCCAGGCTGCCCACAGTGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190046.7
3UTR CAA 72 bp CCCTACGGAGCCTTTGGCAGGACGTGCTTTCCATCCTaGTTCTGGACCCTTCCTTTCGTTAACATTAATATG +
Preference number: 4 (lower is better)
Translates to: PYGAFGRTCFPS*FWTLPFVNINM
Trigger: CATATTAATGTTAACGAAAGGAAGGGTCCAGAACAAGGATGGAAAGCACGTCCTGCCAAAGGCTCCGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCTGAAATAGACGCATaGACCGAGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPEIDA*TEATTL
Trigger: CAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATTCCTGCTGCTGCCCTTaGGAGCGACCTACAACTGGG +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYSCCCP*ERPTTG
Trigger: CCCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGA...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCGAAAAGGCTGTCTGCTaGGGGAAAGCTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFEKAVC*GKAAWA
Trigger: AGCCCAAGCAGCTTTCCCTCAGCAGACAGCCTTTTC...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGAGGTGCTTCTCCTCCTaGTTCCGCTTCGCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMRCFSS*FRFALA
Trigger: GGCCAGCGCGAAGCGGAAGCAGGAGGAGAAGCACCT...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGTGCCCTTATTTAGGTaGAGTGCGGGTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVVPLFR*SAGADS
Trigger: AGAGTCTGCACCCGCACTGCACCTAAATAAGGGCAC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGGTGCCCTTATTTAGGTaGAGTGCGGGTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRVPLFR*SAGADS
Trigger: AGAGTCTGCACCCGCACTGCACCTAAATAAGGGCAC...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTGGGTTTGTAGACGATaGCGCAGAAGGACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVWVCRR*RRRTSS
Trigger: GCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAAAGGTTGCCGCTGTTaGTCCTCTGGCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVKGCRC*SSGIGL
Trigger: CAGACCAATGCCAGAGGAGCAACAGCGGCAACCTTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR GCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGAAAGGTTGCCGCTGTTaGTCCTCTGGCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRKGCRC*SSGIGL
Trigger: CAGACCAATGCCAGAGGAGCAACAGCGGCAACCTTT...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVWHTHR*GAKGCR
Trigger: GCGGCAACCTTTGGCACCGCATCTATGAGTATGCCA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACTGCTGAGGGAAAGCTaGTTGGGCTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTLLRES*LGWEGR
Trigger: CCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAGCAG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATCTGCTGAGGGAAAGCTaGTTGGGCTGGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYLLRES*LGWEGR
Trigger: CCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAGCAG...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAGACACTCCAGCAGCTaGTACTTGACCGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVRHSSS*YLTERG
Trigger: ACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACATCATGTTCACGTAGGTaGGGCCGCGCTGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTSCSRR*GRAGRS
Trigger: ACTGCGACCAGCGCGGCCCCACCTACGTGAACATGA...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp CAGAACAGTCCCTCCACCCCCACTTCATTATACACCTCAGAGCTTTTTGAAAAACCGCTGTTGCTCCTCTaGCATTGGTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: QNSPSTPTSLYTSELFEKPLLLL*HWSEMG
Trigger: ACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGG...TTTTTCAAAAAGCTCTGAGGTGTATAATGAAGTGGGGGTGGAGGGACTGTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCGCTGTTGCTCCTCTaGCATTGGTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPLLLL*HWSEMG
Trigger: ACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR CCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCGGGAAGGCAGGCTGCTaGAAACTGCCACTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFGKAGC*KLPLKL
Trigger: CAGCTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCC...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCAGGAGCTTTACCCGTaGTCCCAAAACCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRQELYP*SQNHSL
Trigger: AAGGGAGTGGTTTTGGGACCACGGGTAAAGCTCCTG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCAGGAGCTTTACCCGTaGTCCCAAAACCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVQELYP*SQNHSL
Trigger: AAGGGAGTGGTTTTGGGACCACGGGTAAAGCTCCTG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCCTGAAATAGACGCATaGACCGAGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFPEIDA*TEATTL
Trigger: CAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGTCCTGCTGCTGCCCTTaGGAGCGACCTACAACTGGG +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMSCCCP*ERPTTG
Trigger: CCCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGA...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATCCTGCTGCTGCCCTTaGGAGCGACCTACAACTGGG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSSCCCP*ERPTTG
Trigger: CCCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATCGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYRSRTT*SRLCLS
Trigger: GCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCG...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGGAAAGGGTTGGTGGATaGGCTTCCTGTTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRERVGG*ASCWKL
Trigger: CAACTTCCAACAGGAAGCTCATCCACCAACCCTTTC...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CAGAACAGTCCCTCCACCCCCACTTCATTATACACCTCAGAGCTTTTTGAAAAAGAAAGGGTTGGTGGATaGGCTTCCTGTTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QNSPSTPTSLYTSELFEKERVGG*ASCWKL
Trigger: CAACTTCCAACAGGAAGCTCATCCACCAACCCTTTC...TTTTTCAAAAAGCTCTGAGGTGTATAATGAAGTGGGGGTGGAGGGACTGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGAAAGGGTTGGTGGATaGGCTTCCTGTTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVERVGG*ASCWKL
Trigger: CAACTTCCAACAGGAAGCTCATCCACCAACCCTTTC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCTGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFWHTHR*GAKGCR
Trigger: GCGGCAACCTTTGGCACCGCATCTATGAGTATGCCA...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTATACTGGGCAGGAGTaGCAAATCCTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVYTGQE*QILLAY
Trigger: GTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAAACGTGGCGAAACCTaGACCATTGGGCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVKRGET*TIGLLR
Trigger: TCTCAACAGCCCAATGGTGCAGGTTTCGCCACGTTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATCATGTTCACGTAGGTaGGGCCGCGCTGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSSCSRR*GRAGRS
Trigger: ACTGCGACCAGCGCGGCCCCACCTACGTGAACATGA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTCATGTTCACGTAGGTaGGGCCGCGCTGGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSSCSRR*GRAGRS
Trigger: ACTGCGACCAGCGCGGCCCCACCTACGTGAACATGA...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVGIGLK*VCRRCR
Trigger: GCGGCATCGTCTACAAACCCATTTCAGACCAATGCC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCACGTGGCGAAACCATTaGGCTGTTGAGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVTWRNH*AVEKRL
Trigger: CAGCCTTTTCTCAACAGCCCAATGGTTTCGCCACGT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGACTCTGGGATGTACTaGAGGTTCCAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVDSGMY*RFQNQH
Trigger: GTGCTGATTTTGGAACCTTCAGTACATCCCAGAGTC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFRSRTT*SRLCLS
Trigger: GCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPLALV*NGFVDD
Trigger: ATCGTCTACAAACCCATTTCAGACCAATGCCAGAGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAGAAAAGGCTGTCTGCTaGGGGAAAGCTGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTEKAVC*GKAAWA
Trigger: AGCCCAAGCAGCTTTCCCTCAGCAGACAGCCTTTTC...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACCAGCAGCTGCTACTTaGCCGAAAGGGGTTACCACT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTPAAAT*PKGVTT
Trigger: AGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATCCAGCAGCTGCTACTTaGCCGAAAGGGGTTACCACT +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYPAAAT*PKGVTT
Trigger: AGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGG...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCGAAAGGGTTGGTGGATaGGCTTCCTGTTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFERVGG*ASCWKL
Trigger: CAACTTCCAACAGGAAGCTCATCCACCAACCCTTTC...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACCAAAACCACTCCCTTaGTCACCTCCTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTPKPLP*SPPCPA
Trigger: TGCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCGCAGCATCTTCAGGTaGTTCTCCTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFRSIFR*FSSCFR
Trigger: GCGGAAGCAGGAGGAGAAGCACCTGAAGATGCTGCG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACGCAGCATCTTCAGGTaGTTCTCCTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSRSIFR*FSSCFR
Trigger: GCGGAAGCAGGAGGAGAAGCACCTGAAGATGCTGCG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCGCAGCATCTTCAGGTaGTTCTCCTCCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMRSIFR*FSSCFR
Trigger: GCGGAAGCAGGAGGAGAAGCACCTGAAGATGCTGCG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTCAAAAGGTCAAACTaGTTCTTCTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLKRSN*FFSCCC
Trigger: GCAGCAGCAGGAGAAGAAGCAGTTTGACCTTTTGAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCAGATCCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTATGCAAAATCTGCATTTaGAGAATTCTGAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: ADPLLFVSMAAFQDPRPLCKICI*RILSCM
Trigger: CATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCA...TAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVRSAKS*WHTHRC
Trigger: GCATCTATGAGTATGCCAGCAGGATTTGGCACTCCT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCTATACTGGGCAGGAGTaGCAAATCCTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFYTGQE*QILLAY
Trigger: GTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATA...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCGCTGGGAAGGCAGGCTaGTGGAAACTGCCACTAAAG +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFAGKAG*WKLPLK
Trigger: CTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCCAGC...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAGCTGGGAAGGCAGGCTaGTGGAAACTGCCACTAAAG +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTAGKAG*WKLPLK
Trigger: CTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCCAGC...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AATGAGATAGTGCTGCACATGGCAAATGGAAAGGTGTCCACGTTAAAACAAAGGGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: NEIVLHMANGKVSTLKQRGIGLK*VCRRCR
Trigger: GCGGCATCGTCTACAAACCCATTTCAGACCAATGCC...CCTTTGTTTTAACGTGGACACCTTTCCATTTGCCATGTGCAGCACTATCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFGIGLK*VCRRCR
Trigger: GCGGCATCGTCTACAAACCCATTTCAGACCAATGCC...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCGGGAAGGCAGGCTGCTaGAAACTGCCACTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFGKAGC*KLPLKL
Trigger: CAGCTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCC...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAGGGAAGGCAGGCTGCTaGAAACTGCCACTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTGKAGC*KLPLKL
Trigger: CAGCTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCC...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATGGGAAGGCAGGCTGCTaGAAACTGCCACTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYGKAGC*KLPLKL
Trigger: CAGCTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCC...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGAAACCTGCACCATTaGGCTGTTGAGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFRNLHH*AVEKRL
Trigger: CAGCCTTTTCTCAACAGCCCAATGGTGCAGGTTTCG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCATAGATTTCACCCTGTaGGGTGGATTTAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVIDFTL*GGFNPL
Trigger: GAGAGGGTTAAATCCACCTCACAGGGTGAAATCTAT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTTTTTGTGGATCCCTaGAGTCTGGAATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLFVDP*SLELLK
Trigger: CTTCAGCAATTCCAGACTTCAGGGATCCACAAAAAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCCCTGAAATAGACGCATaGACCGAGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFPEIDA*TEATTL
Trigger: CAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGG...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATCCTGAAATAGACGCATaGACCGAGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYPEIDA*TEATTL
Trigger: CAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGG...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAGCAGCAAAGATGTCTaGGCCAAGATCACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVSSKDV*AKITQK
Trigger: CTTTTGAGTGATCTTGGCTCAGACATCTTTGCTGCT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCGACTCTGGGATGTACTaGAGGTTCCAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFDSGMY*RFQNQH
Trigger: GTGCTGATTTTGGAACCTTCAGTACATCCCAGAGTC...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AATGAGATAGTGCTGCACATGGCAAATGGAAAGGTGTCCACGTTAAAACAAAGGGACTCTGGGATGTACTaGAGGTTCCAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: NEIVLHMANGKVSTLKQRDSGMY*RFQNQH
Trigger: GTGCTGATTTTGGAACCTTCAGTACATCCCAGAGTC...CCTTTGTTTTAACGTGGACACCTTTCCATTTGCCATGTGCAGCACTATCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp AACAATGATTTCAACTGGAATTTCACCAAAGGAAACAACCCCTTAAGTTCAGAACGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: NNDFNWNFTKGNNPLSSERSRTT*SRLCLS
Trigger: GCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCG...TTCTGAACTTAAGGGGTTGTTTCCTTTGGTGAAATTCCAGTTGAAATCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCCAGCAGCTGCTACTTaGCCGAAAGGGGTTACCACT +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFPAAAT*PKGVTT
Trigger: AGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACCAGCAGCTGCTACTTaGCCGAAAGGGGTTACCACT +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSPAAAT*PKGVTT
Trigger: AGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCCAAAACCACTCCCTTaGTCACCTCCTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMPKPLP*SPPCPA
Trigger: TGCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGAAGATGCACTTGAATaGCTGGGAACTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVEDALE*LGTETT
Trigger: TGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGGAAGATGCACTTGAATaGCTGGGAACTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCREDALE*LGTETT
Trigger: TGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTC...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCGTGCCCTTATTTAGGTaGAGTGCGGGTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFVPLFR*SAGADS
Trigger: AGAGTCTGCACCCGCACTGCACCTAAATAAGGGCAC...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAGTGCCCTTATTTAGGTaGAGTGCGGGTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTVPLFR*SAGADS
Trigger: AGAGTCTGCACCCGCACTGCACCTAAATAAGGGCAC...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCTCAAAAGGTCAAACTaGTTCTTCTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFLKRSN*FFSCCC
Trigger: GCAGCAGCAGGAGAAGAAGCAGTTTGACCTTTTGAG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACATGGGTTTGTAGACGATaGCGCAGAAGGACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTWVCRR*RRRTSS
Trigger: GCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCA...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCAAAGGTTGCCGCTGTTaGTCCTCTGGCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFKGCRC*SSGIGL
Trigger: CAGACCAATGCCAGAGGAGCAACAGCGGCAACCTTT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACATGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTWHTHR*GAKGCR
Trigger: GCGGCAACCTTTGGCACCGCATCTATGAGTATGCCA...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFRSAKS*WHTHRC
Trigger: GCATCTATGAGTATGCCAGCAGGATTTGGCACTCCT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCGCTGGGAAGGCAGGCTaGTGGAAACTGCCACTAAAG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFAGKAG*WKLPLK
Trigger: CTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCCAGC...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTGCTGGGAAGGCAGGCTaGTGGAAACTGCCACTAAAG +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSAGKAG*WKLPLK
Trigger: CTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCCAGC...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCAGACACTCCAGCAGCTaGTACTTGACCGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFRHSSS*YLTERG
Trigger: ACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAGTAGCAGCAACAAATaGATTCGTAGAAGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVSSSNK*IRRRRS
Trigger: GCTACGCCTTCTACGAATCCATTTGTTGCTGCTACT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGAGTAGCAGCAACAAATaGATTCGTAGAAGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRSSSNK*IRRRRS
Trigger: GCTACGCCTTCTACGAATCCATTTGTTGCTGCTACT...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACCGCTGTTGCTCCTCTaGCATTGGTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTPLLLL*HWSEMG
Trigger: ACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTGGGAAGGCAGGCTGCTaGAAACTGCCACTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSGKAGC*KLPLKL
Trigger: CAGCTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCC...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGGGAAGGCAGGCTGCTaGAAACTGCCACTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSGKAGC*KLPLKL
Trigger: CAGCTTTAGTGGCAGTTTCCAGCAGCCTGCCTTCCC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp CCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAGTAAAAATAAGAAAGGGTTGGTaGATGAGCTTCCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PLLFVSMAAFQDPRPLVKIRKGW*MSFLLE
Trigger: TTCCAACAGGAAGCTCATCCACCAACCCTTTCTTAT...TTTTACTAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATCAGGAGCTTTACCCGTaGTCCCAAAACCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYQELYP*SQNHSL
Trigger: AAGGGAGTGGTTTTGGGACCACGGGTAAAGCTCCTG...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGGAGCTTTACCCGTaGTCCCAAAACCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTQELYP*SQNHSL
Trigger: AAGGGAGTGGTTTTGGGACCACGGGTAAAGCTCCTG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCCAGGAGCTTTACCCGTaGTCCCAAAACCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFQELYP*SQNHSL
Trigger: AAGGGAGTGGTTTTGGGACCACGGGTAAAGCTCCTG...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
3UTR CAA 72 bp ACAGATAGAGGAGCATCTTTCCATCTCCCAGGCATCTaGTTATACTATGACACAATTGAAGAGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: TDRGASFHLPGI*LYYDTIEEAIP
Trigger: TGGGATGGCCTCTTCAATTGTGTCATAGTATAACAAGATGCCTGGGAGATGGAAAGATGCTCCTCTATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCATAGATTTCACCCTGTaGGGTGGATTTAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFIDFTL*GGFNPL
Trigger: GAGAGGGTTAAATCCACCTCACAGGGTGAAATCTAT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCTTTTTGTGGATCCCTaGAGTCTGGAATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFLFVDP*SLELLK
Trigger: CTTCAGCAATTCCAGACTTCAGGGATCCACAAAAAG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACCTGAAATAGACGCATaGACCGAGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSPEIDA*TEATTL
Trigger: CAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCCTGAAATAGACGCATaGACCGAGGCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFPEIDA*TEATTL
Trigger: CAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGAAAATTAGCATTTACTaGTCCAGCACTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRKISIY*SSTSTC
Trigger: GCAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTT...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCGTGCCCTTATTTAGGTaGAGTGCGGGTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFVPLFR*SAGADS
Trigger: AGAGTCTGCACCCGCACTGCACCTAAATAAGGGCAC...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGGTGCCCTTATTTAGGTaGAGTGCGGGTGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMVPLFR*SAGADS
Trigger: AGAGTCTGCACCCGCACTGCACCTAAATAAGGGCAC...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAAAAGAAGAGTGACTTaGTGTGGGGAAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVKRRVT*CGETSK
Trigger: TTTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGTGGGTTTGTAGACGATaGCGCAGAAGGACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMWVCRR*RRRTSS
Trigger: GCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCA...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCAAAGGTTGCCGCTGTTaGTCCTCTGGCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFKGCRC*SSGIGL
Trigger: CAGACCAATGCCAGAGGAGCAACAGCGGCAACCTTT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFWHTHR*GAKGCR
Trigger: GCGGCAACCTTTGGCACCGCATCTATGAGTATGCCA...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSWHTHR*GAKGCR
Trigger: GCGGCAACCTTTGGCACCGCATCTATGAGTATGCCA...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACATATACTGGGCAGGAGTaGCAAATCCTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTYTGQE*QILLAY
Trigger: GTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATA...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATTATACTGGGCAGGAGTaGCAAATCCTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: DERARLSWDERGITTYKYYTGQE*QILLAY
Trigger: GTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATA...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCAAACGTGGCGAAACCTaGACCATTGGGCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFKRGET*TIGLLR
Trigger: TCTCAACAGCCCAATGGTGCAGGTTTCGCCACGTTT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGAGACACTCCAGCAGCTaGTACTTGACCGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMRHSSS*YLTERG
Trigger: ACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCT...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAAGACACTCCAGCAGCTaGTACTTGACCGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSRHSSS*YLTERG
Trigger: ACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTAGACACTCCAGCAGCTaGTACTTGACCGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSRHSSS*YLTERG
Trigger: ACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATCCAGAAAGGCCTGTTaGTCCTCTGGCATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSSRKAC*SSGIGL
Trigger: CAGACCAATGCCAGAGGAGCAACAGGCCTTTCTGGA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGAAGAGTGACTTGCTGTaGGGAAACCTCCAAAATTAC +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRKSDLL*GNLQNY
Trigger: GTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTT...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAAGAGTGACTTGCTGTaGGGAAACCTCCAAAATTAC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVKSDLL*GNLQNY
Trigger: GTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR CCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCAGTAGCAGCAACAAATaGATTCGTAGAAGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFSSSNK*IRRRRS
Trigger: GCTACGCCTTCTACGAATCCATTTGTTGCTGCTACT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCCGCTGTTGCTCCTCTaGCATTGGTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSPLLLL*HWSEMG
Trigger: ACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCCGCTGTTGCTCCTCTaGCATTGGTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFPLLLL*HWSEMG
Trigger: ACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVERGYH*FCLSKR
Trigger: ACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCATAAGAAAGGGTTGGTaGATGAGCTTCCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVIRKGW*MSFLLE
Trigger: TTCCAACAGGAAGCTCATCCACCAACCCTTTCTTAT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCATGCACTTGAATGACTaGGAACTGAAACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVMHLND*ELKPQN
Trigger: GTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCAT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGGCCTGTTGCTCCTCTaGCATTGGTCTGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSGLLLL*HWSEMG
Trigger: ACCCATTTCAGACCAATGCCAGAGGAGCAACAGGCC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGCTTTTTGTGGATCCCTaGAGTCTGGAATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQLFVDP*SLELLK
Trigger: CTTCAGCAATTCCAGACTTCAGGGATCCACAAAAAG...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp CAGAACAGTCCCTCCACCCCCACTTCATTATACACCTCAGAGCTTTTTGAAAAAAAAATTAGCATTTACTaGTCCAGCACTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: QNSPSTPTSLYTSELFEKKISIY*SSTSTC
Trigger: ACAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTT...TTTTTCAAAAAGCTCTGAGGTGTATAATGAAGTGGGGGTGGAGGGACTGTTCTG
42% GC, longest homopolymer 9 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGAACTTTACTAACAGTTaGTGCTGTCTGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRNFTNS*CCLMTL
Trigger: CAGAGTCATCAGACAGCATCAACTGTTAGTAAAGTT...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAACTTTACTAACAGTTaGTGCTGTCTGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVNFTNS*CCLMTL
Trigger: CAGAGTCATCAGACAGCATCAACTGTTAGTAAAGTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTPLALV*NGFVDD
Trigger: ATCGTCTACAAACCCATTTCAGACCAATGCCAGAGG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCCCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFPLALV*NGFVDD
Trigger: ATCGTCTACAAACCCATTTCAGACCAATGCCAGAGG...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGAAAGGGTTGGTGGATaGGCTTCCTGTTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSERVGG*ASCWKL
Trigger: CAACTTCCAACAGGAAGCTCATCCACCAACCCTTTC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCGAAAGGGTTGGTGGATaGGCTTCCTGTTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFERVGG*ASCWKL
Trigger: CAACTTCCAACAGGAAGCTCATCCACCAACCCTTTC...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAGCACTTCCACCTGCATaGCTGTTAAAGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTALPPA*LLKCAK
Trigger: CTTTGCACACTTTAACAGTCATGCAGGTGGAAGTGC...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAAAACTGCAGCTAGATaGAAGTACGCTAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVKTAAR*KYAKCC
Trigger: ACAGCATTTAGCGTACTTTCATCTAGCTGCAGTTTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190046.7
CDS-3UTR TCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAAAATTAGCATTTACTaGTCCAGCACTTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVKISIY*SSTSTV
Trigger: CACAGTGGAAGTGCTGGATCAGTAAATGCTAATTTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190046.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACTCAAAAGGTCAAACTaGTTCTTCTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTLKRSN*FFSCCC
Trigger: GCAGCAGCAGGAGAAGAAGCAGTTTGACCTTTTGAG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCCTCAAAAGGTCAAACTaGTTCTTCTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFLKRSN*FFSCCC
Trigger: GCAGCAGCAGGAGAAGAAGCAGTTTGACCTTTTGAG...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTGCAAAATCTGCATTTaGAGAATTCTGAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVCKICI*RILSCM
Trigger: CATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTRSAKS*WHTHRC
Trigger: GCATCTATGAGTATGCCAGCAGGATTTGGCACTCCT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGC +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFRSAKS*WHTHRC
Trigger: GCATCTATGAGTATGCCAGCAGGATTTGGCACTCCT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATATACTGGGCAGGAGTaGCAAATCCTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSYTGQE*QILLAY
Trigger: GTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTATACTGGGCAGGAGTaGCAAATCCTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSYTGQE*QILLAY
Trigger: GTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATA...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGTATACTGGGCAGGAGTaGCAAATCCTGCTGGCATAC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMYTGQE*QILLAY
Trigger: GTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATA...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGAAACGTGGCGAAACCTaGACCATTGGGCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMKRGET*TIGLLR
Trigger: TCTCAACAGCCCAATGGTGCAGGTTTCGCCACGTTT...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTCTTTCACTTTTTGTaGATCCCTGAAGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLFHFL*IPEVWN
Trigger: ATTCCAGACTTCAGGGATCCACAAAAAGTGAAAGAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCTCTTTCACTTTTTGTaGATCCCTGAAGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRLFHFL*IPEVWN
Trigger: ATTCCAGACTTCAGGGATCCACAAAAAGTGAAAGAG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGAGTAGCAGCAACAAATaGATTCGTAGAAGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQSSSNK*IRRRRS
Trigger: GCTACGCCTTCTACGAATCCATTTGTTGCTGCTACT...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSGIGLK*VCRRCR
Trigger: GCGGCATCGTCTACAAACCCATTTCAGACCAATGCC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFGIGLK*VCRRCR
Trigger: GCGGCATCGTCTACAAACCCATTTCAGACCAATGCC...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACGAAACCTGCACCATTaGGCTGTTGAGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSRNLHH*AVEKRL
Trigger: CAGCCTTTTCTCAACAGCCCAATGGTGCAGGTTTCG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCGAAACCTGCACCATTaGGCTGTTGAGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSRNLHH*AVEKRL
Trigger: CAGCCTTTTCTCAACAGCCCAATGGTGCAGGTTTCG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAACGTGGCGAAACCATTaGGCTGTTGAGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSTWRNH*AVEKRL
Trigger: CAGCCTTTTCTCAACAGCCCAATGGTTTCGCCACGT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
3UTR CAA 72 bp CAGGCATTACATACTGTGTATGCAATTTCAGCTTTTTaGATGGCACAGAGTTACTACTTCTCAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QALHTVYAISAF*MAQSYYFSTGL
Trigger: CAGCCCAGTTGAGAAGTAGTAACTCTGTGCCATCAAAAAAGCTGAAATTGCATACACAGTATGTAATGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACTTTTTGTGGATCCCTaGAGTCTGGAATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTLFVDP*SLELLK
Trigger: CTTCAGCAATTCCAGACTTCAGGGATCCACAAAAAG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TACTTGTTTAAGATTGTGACTCAGACAACAAGTGCTCAAGACTCTGGAGAACAAAGCAGCAAAGATGTCTaGGCCAAGATCACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: YLFKIVTQTTSAQDSGEQSSKDV*AKITQK
Trigger: CTTTTGAGTGATCTTGGCTCAGACATCTTTGCTGCT...TTGTTCTCCAGAGTCTTGAGCACTTGTTGTCTGAGTCACAATCTTAAACAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCAAAATTAGCATTTACTaGTCCAGCACTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFKISIY*SSTSTC
Trigger: ACAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGGACTCTGGGATGTACTaGAGGTTCCAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMDSGMY*RFQNQH
Trigger: GTGCTGATTTTGGAACCTTCAGTACATCCCAGAGTC...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTGACTCTGGGATGTACTaGAGGTTCCAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSDSGMY*RFQNQH
Trigger: GTGCTGATTTTGGAACCTTCAGTACATCCCAGAGTC...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCGACTCTGGGATGTACTaGAGGTTCCAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFDSGMY*RFQNQH
Trigger: GTGCTGATTTTGGAACCTTCAGTACATCCCAGAGTC...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMPLALV*NGFVDD
Trigger: ATCGTCTACAAACCCATTTCAGACCAATGCCAGAGG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGAT +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFPLALV*NGFVDD
Trigger: ATCGTCTACAAACCCATTTCAGACCAATGCCAGAGG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAGAAGATGCACTTGAATaGCTGGGAACTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTEDALE*LGTETT
Trigger: TGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTC...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCGAAGATGCACTTGAATaGCTGGGAACTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFEDALE*LGTETT
Trigger: TGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTC...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCTAGCCATATCTGTTTaGAGACTTCATTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRLAISV*RLHFHV
Trigger: AACATGGAAATGAAGTCTGCAAACAGATATGGCTAG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTAGCCATATCTGTTTaGAGACTTCATTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLAISV*RLHFHV
Trigger: AACATGGAAATGAAGTCTGCAAACAGATATGGCTAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACTCAAAAGGTCAAACTaGTTCTTCTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSLKRSN*FFSCCC
Trigger: GCAGCAGCAGGAGAAGAAGCAGTTTGACCTTTTGAG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCTCAAAAGGTCAAACTaGTTCTTCTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMLKRSN*FFSCCC
Trigger: GCAGCAGCAGGAGAAGAAGCAGTTTGACCTTTTGAG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFRSAKS*WHTHRC
Trigger: GCATCTATGAGTATGCCAGCAGGATTTGGCACTCCT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGC +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSRSAKS*WHTHRC
Trigger: GCATCTATGAGTATGCCAGCAGGATTTGGCACTCCT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCACTTGAGAATGCATTaGTCCAGAAAGGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMHLRMH*SRKACC
Trigger: GCAACAGGCCTTTCTGGAGCAATGCATTCTCAAGTG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCTCTTTCACTTTTTGTaGATCCCTGAAGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFLFHFL*IPEVWN
Trigger: ATTCCAGACTTCAGGGATCCACAAAAAGTGAAAGAG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCATAGATTTCACCCTGTaGGGTGGATTTAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFIDFTL*GGFNPL
Trigger: GAGAGGGTTAAATCCACCTCACAGGGTGAAATCTAT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGATAGATTTCACCCTGTaGGGTGGATTTAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMIDFTL*GGFNPL
Trigger: GAGAGGGTTAAATCCACCTCACAGGGTGAAATCTAT...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTATAGATTTCACCCTGTaGGGTGGATTTAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSIDFTL*GGFNPL
Trigger: GAGAGGGTTAAATCCACCTCACAGGGTGAAATCTAT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACTTTTTGTGGATCCCTaGAGTCTGGAATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSLFVDP*SLELLK
Trigger: CTTCAGCAATTCCAGACTTCAGGGATCCACAAAAAG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCTTTTTGTGGATCCCTaGAGTCTGGAATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFLFVDP*SLELLK
Trigger: CTTCAGCAATTCCAGACTTCAGGGATCCACAAAAAG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGAGCAGCAAAGATGTCTaGGCCAAGATCACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMSSKDV*AKITQK
Trigger: CTTTTGAGTGATCTTGGCTCAGACATCTTTGCTGCT...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCAGCAGCAAAGATGTCTaGGCCAAGATCACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFSSKDV*AKITQK
Trigger: CTTTTGAGTGATCTTGGCTCAGACATCTTTGCTGCT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAAGCAGCAAAGATGTCTaGGCCAAGATCACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSSSKDV*AKITQK
Trigger: CTTTTGAGTGATCTTGGCTCAGACATCTTTGCTGCT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTAGCAGCAAAGATGTCTaGGCCAAGATCACTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSSSKDV*AKITQK
Trigger: CTTTTGAGTGATCTTGGCTCAGACATCTTTGCTGCT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGAAGATGCACTTGAATaGCTGGGAACTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSEDALE*LGTETT
Trigger: TGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAAAATTAGCATTTACTaGTCCAGCACTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTKISIY*SSTSTC
Trigger: GCAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCACTAGACTGTCCAAATaGATCAAAGTTTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVTRLSK*IKVCKI
Trigger: GATTTTGCAAACTTTGATGCATTTGGACAGTCTAGT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAAAAGAAGAGTGACTTaGTGTGGGGAAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTKRRVT*CGETSK
Trigger: TTTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCAAGAGTGACTTGCTGTaGGGAAACCTCCAAAATTAC +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFKSDLL*GNLQNY
Trigger: GTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAAGAGTGACTTGCTGTaGGGAAACCTCCAAAATTAC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTKSDLL*GNLQNY
Trigger: GTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp TACTTGTTTAAGATTGTGACTCAGACAACAAGTGCTCAAGACTCTGGAGAACAAAAGAGTGACTTGCTGTaGGGAAACCTCCAAAATTAC +
Preference number: 4 (lower is better)
Translates to: YLFKIVTQTTSAQDSGEQKSDLL*GNLQNY
Trigger: GTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTT...TTGTTCTCCAGAGTCTTGAGCACTTGTTGTCTGAGTCACAATCTTAAACAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAAGTAGCAGCAACAAATaGATTCGTAGAAGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSSSSNK*IRRRRS
Trigger: GCTACGCCTTCTACGAATCCATTTGTTGCTGCTACT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGT +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFERGYH*FCLSKR
Trigger: ACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTC...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATAAGAAAGGGTTGGTaGATGAGCTTCCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFIRKGW*MSFLLE
Trigger: TTCCAACAGGAAGCTCATCCACCAACCCTTTCTTAT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCACTTGAATGACTaGGAACTGAAACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFMHLND*ELKPQN
Trigger: GTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCAT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAAAATTAGCATTTACTaGTCCAGCACTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTKISIY*SSTSTC
Trigger: ACAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCAACTTTACTAACAGTTaGTGCTGTCTGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFNFTNS*CCLMTL
Trigger: CAGAGTCATCAGACAGCATCAACTGTTAGTAAAGTT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAACTTTACTAACAGTTaGTGCTGTCTGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTNFTNS*CCLMTL
Trigger: CAGAGTCATCAGACAGCATCAACTGTTAGTAAAGTT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCTGCAAAATCTGCATTTaGAGAATTCTGAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFCKICI*RILSCM
Trigger: CATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCA...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAAAAAGAAGAGTGACTTaGTGTGGGGAAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSKRRVT*CGETSK
Trigger: TTTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTAAAAGAAGAGTGACTTaGTGTGGGGAAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSKRRVT*CGETSK
Trigger: TTTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGT +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMERGYH*FCLSKR
Trigger: ACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTC...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGT +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSERGYH*FCLSKR
Trigger: ACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTC...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCATAAGAAAGGGTTGGTaGATGAGCTTCCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFIRKGW*MSFLLE
Trigger: TTCCAACAGGAAGCTCATCCACCAACCCTTTCTTAT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTATAAGAAAGGGTTGGTaGATGAGCTTCCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSIRKGW*MSFLLE
Trigger: TTCCAACAGGAAGCTCATCCACCAACCCTTTCTTAT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAATAAGAAAGGGTTGGTaGATGAGCTTCCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSIRKGW*MSFLLE
Trigger: TTCCAACAGGAAGCTCATCCACCAACCCTTTCTTAT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCATGCACTTGAATGACTaGGAACTGAAACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFMHLND*ELKPQN
Trigger: GTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCAT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTATGCACTTGAATGACTaGGAACTGAAACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSMHLND*ELKPQN
Trigger: GTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCAT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTAAAATTAGCATTTACTaGTCCAGCACTTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSKISIY*SSTSTC
Trigger: ACAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR TCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTAACTTTACTAACAGTTaGTGCTGTCTGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSNFTNS*CCLMTL
Trigger: CAGAGTCATCAGACAGCATCAACTGTTAGTAAAGTT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR TCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCAACTTTACTAACAGTTaGTGCTGTCTGATGACTCTG +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFNFTNS*CCLMTL
Trigger: CAGAGTCATCAGACAGCATCAACTGTTAGTAAAGTT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATGCAAAATCTGCATTTaGAGAATTCTGAGCTGCATG +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSCKICI*RILSCM
Trigger: CATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CCA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCTCTTTCACTTTTTGTaGATCCCTGAAGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FAHITWCLIHSAGILRTSLFHFL*IPEVWN
Trigger: ATTCCAGACTTCAGGGATCCACAAAAAGTGAAAGAG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACTAGCCATATCTGTTTaGAGACTTCATTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSLAISV*RLHFHV
Trigger: AACATGGAAATGAAGTCTGCAAACAGATATGGCTAG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCTAGCCATATCTGTTTaGAGACTTCATTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: HITWCLIHSAGILRTSFMLAISV*RLHFHV
Trigger: AACATGGAAATGAAGTCTGCAAACAGATATGGCTAG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR GCA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCACTAGACTGTCCAAATaGATCAAAGTTTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: AHITWCLIHSAGILRTSFTRLSK*IKVCKI
Trigger: GATTTTGCAAACTTTGATGCATTTGGACAGTCTAGT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAACTAGACTGTCCAAATaGATCAAAGTTTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTTRLSK*IKVCKI
Trigger: GATTTTGCAAACTTTGATGCATTTGGACAGTCTAGT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCACTAGACTGTCCAAATaGATCAAAGTTTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFTRLSK*IKVCKI
Trigger: GATTTTGCAAACTTTGATGCATTTGGACAGTCTAGT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR GCA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAACTAGACTGTCCAAATaGATCAAAGTTTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: NISQFLTYMMPLPFPANSTRLSK*IKVCKI
Trigger: GATTTTGCAAACTTTGATGCATTTGGACAGTCTAGT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS TCA 90 bp AGATGCGGTGCCAAAGGTTGCCGCCCCAAACGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGCAGAGGCACCCACAGGCACTGTTCC +
Preference number: 5 (lower is better)
Translates to: RCGAKGCRPKRSRTT*SRLCLSRGTHRHCS
Trigger: GGAACAGTGCCTGTGGGTGCCTCTGCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGTTTGGGGCGGCAACCTTTGGCACCGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113444.8
CDS TCA 90 bp AAATGGATTCGTAGAAGGCGTAGCCCCAAACGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGCAGAGGCACCCACAGGCACTGTTCC +
Preference number: 5 (lower is better)
Translates to: KWIRRRRSPKRSRTT*SRLCLSRGTHRHCS
Trigger: GGAACAGTGCCTGTGGGTGCCTCTGCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGTTTGGGGCTACGCCTTCTACGAATCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS TCA 90 bp GATGCGGTGCCAAAGGTTGCCGCTGTTGCTCCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGATGCCGCAGAAGGACCAGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: DAVPKVAAVAPLALV*NGFVDDAAEGPVAA
Trigger: TGCTGCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGGCAACCTTTGGCACCGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CCA 90 bp AAAGCTGGTAGGGAGACTATACTGGGCAGGAGTGCCAAATCCTGCTaGCATACTCATAGATGCGGTGCCAAAGGTTGCCGCCCCAAACGG +
Preference number: 5 (lower is better)
Translates to: KAGRETILGRSAKSC*HTHRCGAKGCRPKR
Trigger: CCGTTTGGGGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113444.8
CDS TCA 90 bp CATTACTGGTGGGCGTGTACGCATTACTGGAGGTGGCTGCAGAGCTaGACACGCTGTCTAACTCTGCCAGGGCTGCATACTTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: HYWWACTHYWRWLQS*TRCLTLPGLHTCLK
Trigger: CTTCAGACAAGTATGCAGCCCTGGCAGAGTTAGACAGCGTGTTCAGCTCTGCAGCCACCTCCAGTAATGCGTACACGCCCACCAGTAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CCA 90 bp AAAGCTGGTAGGGAGACTATACTGGGCAGGAGTGCCAAATCCTGCTaGCATACTCATAGATGCGGTGCCAAAGGTTGCCGCTGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: KAGRETILGRSAKSC*HTHRCGAKGCRCCS
Trigger: GGAGCAACAGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CCA 90 bp GCAGGCTGCTGGAAACTGCCACTAAAGCTGGTAGGGAGACTATACTaGGCAGGAGTGCCAAATCCTGCTGGCATACTCATAGATGCGGTG +
Preference number: 5 (lower is better)
Translates to: AGCWKLPLKLVGRLY*AGVPNPAGILIDAV
Trigger: CACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTTAGTGGCAGTTTCCAGCAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS GCA 90 bp ACTAAAGCTGGTAGGGAGACTATACTGGGCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGCGGTGCCAAAGGTTGCCGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: TKAGRETILGRSAKS*WHTHRCGAKGCRCC
Trigger: GCAACAGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS GCA 90 bp ACTAAAGCTGGTAGGGAGACTATACTGGGCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGCGGTGCCAAAGGTTGCCGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: TKAGRETILGRSAKS*WHTHRCGAKGCRPK
Trigger: TTTGGGGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113444.8
CDS CCA 90 bp GGTGCCAAAGGTTGCCGCTGTTGCTCCTCTGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGCAGAAGGACCAGTAGCAGCAACAAA +
Preference number: 5 (lower is better)
Translates to: GAKGCRCCSSGIGLK*VCRRCRRRTSSSNK
Trigger: TTTGTTGCTGCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGGCAACCTTTGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CCA 90 bp ACTAGACACTCCAGCAGCTGCTACTTGACCGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGTGGCGAAACCTGCACCATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TRHSSSCYLTERGYH*FCLSKRGETCTIGL
Trigger: CAGCCCAATGGTGCAGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS CCA 90 bp AAAGCTGGTAGGGAGACTATACTGGGCAGGAGTGCCAAATCCTGCTaGCATACTCATAGATGCGGTGCCAAAGGTTGCCGCAAAATGAGC +
Preference number: 5 (lower is better)
Translates to: KAGRETILGRSAKSC*HTHRCGAKGCRKMS
Trigger: GCTCATTTTGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTGAGGGAAAGCTGCTaGGGCTGGGAAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLRESC*GWEGRL
Trigger: CAGCCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS GCA 90 bp CGCTGTTGCTCCTCTGGCATTGGTCTGAAATGGGTTTGTAGACGATaGCGCAGAAGGACCAGTAGCAGCAACAAATGGATTCGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RCCSSGIGLKWVCRR*RRRTSSSNKWIRRR
Trigger: CCTTCTACGAATCCATTTGTTGCTGCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS GCA 90 bp GCCTGTTGCTCCTCTGGCATTGGTCTGAAATGGGTTTGTAGACGATaGCGCAGAAGGACCAGTAGCAGCAACAAATGGATTCGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: ACCSSGIGLKWVCRR*RRRTSSSNKWIRRR
Trigger: CCTTCTACGAATCCATTTGTTGCTGCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS GCA 90 bp ACTAAAGCTGGTAGGGAGACTATACTGGGCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGCGGTGCCAAAGGTTGCCGCAAAATG +
Preference number: 5 (lower is better)
Translates to: TKAGRETILGRSAKS*WHTHRCGAKGCRKM
Trigger: CATTTTGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS CCA 90 bp CATTGCTCCAGAAAGGCCTGTTGCTCCTCTGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGCAGAAGGACCAGTAGCAGCAACAAA +
Preference number: 5 (lower is better)
Translates to: HCSRKACCSSGIGLK*VCRRCRRRTSSSNK
Trigger: TTTGTTGCTGCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGGCCTTTCTGGAGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCTCGCAGTCGAAACACTaGCGGTTGTGCGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFSQSKH*RLCGSP
Trigger: GGGGCTGCCGCACAACCGCAAGTGTTTCGACTGCGA...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTCCTGCTGCTGCCCTaGAGAGCGACCTACAACTGG +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLLLLP*RATYNW
Trigger: CCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCTCCTGCTGCTGCCCTaGAGAGCGACCTACAACTGG +
Preference number: 5 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRLLLLP*RATYNW
Trigger: CCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGAG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCATGCGGTGCCAAAGGTaGCCGCTGTTGCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVMRCQR*PLLLLW
Trigger: CCAGAGGAGCAACAGCGGCAACCTTTGGCACCGCAT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CCA 90 bp ACTAGACACTCCAGCAGCTGCTACTTGACCGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGTGGCGAAACCATTGGGCTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: TRHSSSCYLTERGYH*FCLSKRGETIGLLR
Trigger: TCTCAACAGCCCAATGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR CAA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGCTGAGGGAAAGCTGCTaGGGCTGGGAAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQLRESC*GWEGRL
Trigger: CAGCCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAG...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGCTTCCTGTTGGAAGTaGTCCTGTCGGCGCACCAGT +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVASCWK*SCRRTS
Trigger: ACTGGTGCGCCGACAGGACAACTTCCAACAGGAAGC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCCCAAAACCACTCCCTaGATCACCTCCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRPKTTP*ITSLPS
Trigger: GCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGGG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCCAAAACCACTCCCTaGATCACCTCCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPKTTP*ITSLPS
Trigger: GCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACATCGCAGTCGAAACACTaGCGGTTGTGCGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTSQSKH*RLCGSP
Trigger: GGGGCTGCCGCACAACCGCAAGTGTTTCGACTGCGA...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCTCGCAGTCGAAACACTaGCGGTTGTGCGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFSQSKH*RLCGSP
Trigger: GGGGCTGCCGCACAACCGCAAGTGTTTCGACTGCGA...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATTCGCAGTCGAAACACTaGCGGTTGTGCGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: DERARLSWDERGITTYKYSQSKH*RLCGSP
Trigger: GGGGCTGCCGCACAACCGCAAGTGTTTCGACTGCGA...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGCTCCTGCTGCTGCCCTaGAGAGCGACCTACAACTGG +
Preference number: 5 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQLLLLP*RATYNW
Trigger: CCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGAG...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCACGGAGCAGGACCACTaGAAGCAGGTTGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVTEQDH*KQVVSE
Trigger: CTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCAAAGGTTGCCGCTGTaGCTCCTCTGGCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVQRLPL*LLWHWS
Trigger: AGACCAATGCCAGAGGAGCAACAGCGGCAACCTTTG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTCCAGCAGCTGCTACTaGACCGAAAGGGGTTACCAC +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVSSSCY*TERGYH
Trigger: GTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCGCTTCCTGTTGGAAGTaGTCCTGTCGGCGCACCAGT +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFASCWK*SCRRTS
Trigger: ACTGGTGCGCCGACAGGACAACTTCCAACAGGAAGC...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTGGATGAGCTTCCTGTaGGAAGTTGTCCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVWMSFL*EVVLSA
Trigger: CGCCGACAGGACAACTTCCAACAGGAAGCTCATCCA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCTCCAGAAAGGCCTGTaGCTCCTCTGGCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLQKGL*LLWHWS
Trigger: AGACCAATGCCAGAGGAGCAACAGGCCTTTCTGGAG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGTCGCAGTCGAAACACTaGCGGTTGTGCGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: HITWCLIHSAGILRTSFMSQSKH*RLCGSP
Trigger: GGGGCTGCCGCACAACCGCAAGTGTTTCGACTGCGA...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCACGGAGCAGGACCACTaGAAGCAGGTTGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFTEQDH*KQVVSE
Trigger: CTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAATGCGGTGCCAAAGGTaGCCGCTGTTGCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTMRCQR*PLLLLW
Trigger: CCAGAGGAGCAACAGCGGCAACCTTTGGCACCGCAT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCTGAGGGAAAGCTGCTaGGGCTGGGAAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFLRESC*GWEGRL
Trigger: CAGCCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCTGAGGGAAAGCTGCTaGGGCTGGGAAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSLRESC*GWEGRL
Trigger: CAGCCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACTGAGGGAAAGCTGCTaGGGCTGGGAAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSLRESC*GWEGRL
Trigger: CAGCCTGCCTTCCCAGCCCAAGCAGCTTTCCCTCAG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCTCCAGCAGCTGCTACTaGACCGAAAGGGGTTACCAC +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFSSSCY*TERGYH
Trigger: GTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCTGGATGAGCTTCCTGTaGGAAGTTGTCCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFWMSFL*EVVLSA
Trigger: CGCCGACAGGACAACTTCCAACAGGAAGCTCATCCA...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCAGATCCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTACCTAGCCATATCTGTTaGCAGACTTCATTTCCATGT +
Preference number: 5 (lower is better)
Translates to: ADPLLFVSMAAFQDPRPLPSHIC*QTSFPC
Trigger: ACATGGAAATGAAGTCTGCAAACAGATATGGCTAGG...TAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCTCCTGCTGCTGCCCTaGAGAGCGACCTACAACTGG +
Preference number: 5 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFLLLLP*RATYNW
Trigger: CCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGAG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCTCCTGCTGCTGCCCTaGAGAGCGACCTACAACTGG +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSLLLLP*RATYNW
Trigger: CCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGAG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACTCCTGCTGCTGCCCTaGAGAGCGACCTACAACTGG +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSLLLLP*RATYNW
Trigger: CCAGTTGTAGGTCGCTCTCAAGGGCAGCAGCAGGAG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTATGCGGTGCCAAAGGTaGCCGCTGTTGCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSMRCQR*PLLLLW
Trigger: CCAGAGGAGCAACAGCGGCAACCTTTGGCACCGCAT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCTGCACCATTGGGCTGTaGAGAAAAGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFCTIGL*RKGCLL
Trigger: CAGCAGACAGCCTTTTCTCAACAGCCCAATGGTGCA...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGA +
Preference number: 5 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRGLPLV*FVQTWR
Trigger: TCGCCACGTTTGGACAAACAAAACCAGTGGTAACCC...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGA +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVGLPLV*FVQTWR
Trigger: TCGCCACGTTTGGACAAACAAAACCAGTGGTAACCC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAGCTTCCTGTTGGAAGTaGTCCTGTCGGCGCACCAGT +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTASCWK*SCRRTS
Trigger: ACTGGTGCGCCGACAGGACAACTTCCAACAGGAAGC...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCGCTTCCTGTTGGAAGTaGTCCTGTCGGCGCACCAGT +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFASCWK*SCRRTS
Trigger: ACTGGTGCGCCGACAGGACAACTTCCAACAGGAAGC...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCCCTTGATCACCTCCTaGCCCAGCACTGAAGATATT +
Preference number: 5 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRPLITS*PSTEDI
Trigger: AATATCTTCAGTGCTGGGCAAGGAGGTGATCAAGGG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCCTTGATCACCTCCTaGCCCAGCACTGAAGATATT +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPLITS*PSTEDI
Trigger: AATATCTTCAGTGCTGGGCAAGGAGGTGATCAAGGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACCCAAAACCACTCCCTaGATCACCTCCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTPKTTP*ITSLPS
Trigger: GCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGGG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCCCCAAAACCACTCCCTaGATCACCTCCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFPKTTP*ITSLPS
Trigger: GCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGGG...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGAAACCATTGGGCTGTaGAGAAAAGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVETIGL*RKGCLL
Trigger: CAGCAGACAGCCTTTTCTCAACAGCCCAATGGTTTC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR CAA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGGAAAAGAAGAGTGACTaGCTGTGGGGAAACCTCCAA +
Preference number: 5 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCREKKSD*LWGNLQ
Trigger: TTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTTC...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCGAAAAGAAGAGTGACTaGCTGTGGGGAAACCTCCAA +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVEKKSD*LWGNLQ
Trigger: TTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTTC...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCACGGAGCAGGACCACTaGAAGCAGGTTGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFTEQDH*KQVVSE
Trigger: CTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACC +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVYHWFC*SKRGET
Trigger: GGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCTCCAGCAGCTGCTACTaGACCGAAAGGGGTTACCAC +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFSSSCY*TERGYH
Trigger: GTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATTCCAGCAGCTGCTACTaGACCGAAAGGGGTTACCAC +
Preference number: 5 (lower is better)
Translates to: DERARLSWDERGITTYKYSSSCY*TERGYH
Trigger: GTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGCTTCCTGTTGGAAGTaGTCCTGTCGGCGCACCAGT +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSASCWK*SCRRTS
Trigger: ACTGGTGCGCCGACAGGACAACTTCCAACAGGAAGC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCCCTTGATCACCTCCTaGCCCAGCACTGAAGATATT +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFPLITS*PSTEDI
Trigger: AATATCTTCAGTGCTGGGCAAGGAGGTGATCAAGGG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCCCAAAACCACTCCCTaGATCACCTCCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSPKTTP*ITSLPS
Trigger: GCTGGGCAAGGAGGTGATCAAGGGAGTGGTTTTGGG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS TCA 90 bp TCTAACTCTGCCAGGGCTGCATACTTGTCTGAAGATGCACTTGAATaGCTGGGAACTTGCCCAGCACTGAAGATATTGTCTAAATTAGCA +
Preference number: 5 (lower is better)
Translates to: SNSARAAYLSEDALE*LGTCPALKILSKLA
Trigger: TGCTAATTTAGACAATATCTTCAGTGCTGGGCAAGTTCCCAGTCATTCAAGTGCATCTTCAGACAAGTATGCAGCCCTGGCAGAGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063380.11
CDS-3UTR CAA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCACGGAGCAGGACCACTaGAAGCAGGTTGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFTEQDH*KQVVSE
Trigger: CTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCAAAGGTTGCCGCTGTaGCTCCTCTGGCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSQRLPL*LLWHWS
Trigger: AGACCAATGCCAGAGGAGCAACAGCGGCAACCTTTG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCAAAGGTTGCCGCTGTaGCTCCTCTGGCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: HITWCLIHSAGILRTSFMQRLPL*LLWHWS
Trigger: AGACCAATGCCAGAGGAGCAACAGCGGCAACCTTTG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGA +
Preference number: 5 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQGLPLV*FVQTWR
Trigger: TCGCCACGTTTGGACAAACAAAACCAGTGGTAACCC...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCCAGCAGCTGCTACTaGACCGAAAGGGGTTACCAC +
Preference number: 5 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFSSSCY*TERGYH
Trigger: GTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGTCCAGCAGCTGCTACTaGACCGAAAGGGGTTACCAC +
Preference number: 5 (lower is better)
Translates to: HITWCLIHSAGILRTSFMSSSCY*TERGYH
Trigger: GTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATGGATGAGCTTCCTGTaGGAAGTTGTCCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSWMSFL*EVVLSA
Trigger: CGCCGACAGGACAACTTCCAACAGGAAGCTCATCCA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTGGATGAGCTTCCTGTaGGAAGTTGTCCTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSWMSFL*EVVLSA
Trigger: CGCCGACAGGACAACTTCCAACAGGAAGCTCATCCA...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGGAAACCATTGGGCTGTaGAGAAAAGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQETIGL*RKGCLL
Trigger: CAGCAGACAGCCTTTTCTCAACAGCCCAATGGTTTC...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCAGCGTGAGGAAACACTaGAGAATGCATTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFSVRKH*RMHCSR
Trigger: TCTGGAGCAATGCATTCTCAAGTGTTTCCTCACGCT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCCTAGCCATATCTGTTaGCAGACTTCATTTCCATGT +
Preference number: 5 (lower is better)
Translates to: LLSPLFCTYYLVFNTQCRPSHIC*QTSFPC
Trigger: ACATGGAAATGAAGTCTGCAAACAGATATGGCTAGG...CCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCTAGCCATATCTGTTaGCAGACTTCATTTCCATGT +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPSHIC*QTSFPC
Trigger: ACATGGAAATGAAGTCTGCAAACAGATATGGCTAGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCAAACTCTTTCACTTTTaGTGGATCCCTGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVKLFHF*WIPEVW
Trigger: CCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTT...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CCACTCCTGTTCGTTTCAATGGCAGCATTTCAAGACCCCAGACCACTAGTAAAATTGCAAAATCTGCATTaGCAGAATTCTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: PLLFVSMAAFQDPRPLVKLQNLH*QNSELH
Trigger: ATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCAA...TTTTACTAGTGGTCTGGGGTCTTGAAATGCTGCCATTGAAACGAACAGGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCCCAGCACTGAAGATATaGTCTAAATTAGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVPALKI*SKLASA
Trigger: GGCACTTGCTAATTTAGACAATATCTTCAGTGCTGG...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATGCACCATTGGGCTGTaGAGAAAAGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSCTIGL*RKGCLL
Trigger: CAGCAGACAGCCTTTTCTCAACAGCCCAATGGTGCA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTGCACCATTGGGCTGTaGAGAAAAGGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSCTIGL*RKGCLL
Trigger: CAGCAGACAGCCTTTTCTCAACAGCCCAATGGTGCA...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCCCCTTGATCACCTCCTaGCCCAGCACTGAAGATATT +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFPLITS*PSTEDI
Trigger: AATATCTTCAGTGCTGGGCAAGGAGGTGATCAAGGG...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GATGAAAGGGCCAGATTATCCTGGGATGAACGAGGCATTACTACATATAAATATCCCTTGATCACCTCCTaGCCCAGCACTGAAGATATT +
Preference number: 5 (lower is better)
Translates to: DERARLSWDERGITTYKYPLITS*PSTEDI
Trigger: AATATCTTCAGTGCTGGGCAAGGAGGTGATCAAGGG...ATATTTATATGTAGTAATGCCTCGTTCATCCCAGGATAATCTGGCCCTTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113444.8
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCAAACTCTTTCACTTTTaGTGGATCCCTGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFKLFHF*WIPEVW
Trigger: CCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTT...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCGGTACAGAGTCTTGCAAAATCTGCATTaGCAGAATTCTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: KRRRDVIWSHKRSFRYRVLQNLH*QNSELH
Trigger: ATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCAA...GACTCTGTACCGGAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS-3UTR CAA 90 bp AGACAACAGTGCAAGAGGCGAAGAGATGTAATATGGTCACATAAACGTTCGTTCCCAGCACTGAAGATATaGTCTAAATTAGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: RQQCKRRRDVIWSHKRSFPALKI*SKLASA
Trigger: GGCACTTGCTAATTTAGACAATATCTTCAGTGCTGG...GAACGAACGTTTATGTGACCATATTACATCTCTTCGCCTCTTGCACTGTTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACATACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACC +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTYHWFC*SKRGET
Trigger: GGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTA...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TACTTGTTTAAGATTGTGACTCAGACAACAAGTGCTCAAGACTCTGGAGAACAATACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACC +
Preference number: 5 (lower is better)
Translates to: YLFKIVTQTTSAQDSGEQYHWFC*SKRGET
Trigger: GGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTA...TTGTTCTCCAGAGTCTTGAGCACTTGTTGTCTGAGTCACAATCTTAAACAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGA +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSGLPLV*FVQTWR
Trigger: TCGCCACGTTTGGACAAACAAAACCAGTGGTAACCC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGA +
Preference number: 5 (lower is better)
Translates to: HITWCLIHSAGILRTSFMGLPLV*FVQTWR
Trigger: TCGCCACGTTTGGACAAACAAAACCAGTGGTAACCC...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCCCCTTGATCACCTCCTaGCCCAGCACTGAAGATATT +
Preference number: 5 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFPLITS*PSTEDI
Trigger: AATATCTTCAGTGCTGGGCAAGGAGGTGATCAAGGG...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCACACTTGAGAATGCATaGCTCCAGAAAGGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFTLENA*LQKGLL
Trigger: CAACAGGCCTTTCTGGAGCAATGCATTCTCAAGTGT...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTGAAAAGAAGAGTGACTaGCTGTGGGGAAACCTCCAA +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSEKKSD*LWGNLQ
Trigger: TTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTTC...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAGAAAAGAAGAGTGACTaGCTGTGGGGAAACCTCCAA +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSEKKSD*LWGNLQ
Trigger: TTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTTC...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp CAAACTGGAAGAGGAAGCTTTCAAGCTGTTCTTTTAGAAACTTTAGGGTCACAGCCAGCACTGAAGATATaGTCTAAATTAGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: QTGRGSFQAVLLETLGSQPALKI*SKLASA
Trigger: GGCACTTGCTAATTTAGACAATATCTTCAGTGCTGG...CTGTGACCCTAAAGTTTCTAAAAGAACAGCTTGAAAGCTTCCTCTTCCAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACC +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSYHWFC*SKRGET
Trigger: GGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGTACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACC +
Preference number: 5 (lower is better)
Translates to: HITWCLIHSAGILRTSFMYHWFC*SKRGET
Trigger: GGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTA...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACACCTAGCCATATCTGTTaGCAGACTTCATTTCCATGT +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTPSHIC*QTSFPC
Trigger: ACATGGAAATGAAGTCTGCAAACAGATATGGCTAGG...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCCCTAGCCATATCTGTTaGCAGACTTCATTTCCATGT +
Preference number: 5 (lower is better)
Translates to: AHITWCLIHSAGILRTSFPSHIC*QTSFPC
Trigger: ACATGGAAATGAAGTCTGCAAACAGATATGGCTAGG...GAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACAAAACTCTTTCACTTTTaGTGGATCCCTGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTKLFHF*WIPEVW
Trigger: CCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTT...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACAATGATTTCAACTGGAATTTCACCAAAGGAAACAACCCCTTAAGTTCAGAAGAAAAGAAGAGTGACTaGCTGTGGGGAAACCTCCAA +
Preference number: 5 (lower is better)
Translates to: NNDFNWNFTKGNNPLSSEEKKSD*LWGNLQ
Trigger: TTGGAGGTTTCCCCACAGCAAGTCACTCTTCTTTTC...TTCTGAACTTAAGGGGTTGTTTCCTTTGGTGAAATTCCAGTTGAAATCATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACCTAGCCATATCTGTTaGCAGACTTCATTTCCATGT +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSPSHIC*QTSFPC
Trigger: ACATGGAAATGAAGTCTGCAAACAGATATGGCTAGG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCAAACTCTTTCACTTTTaGTGGATCCCTGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: FCTYYLVFNTQCRHFKDFKLFHF*WIPEVW
Trigger: CCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTT...GAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGAAACTCTTTCACTTTTaGTGGATCCCTGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: HITWCLIHSAGILRTSFMKLFHF*WIPEVW
Trigger: CCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTT...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCAAAACTCTTTCACTTTTaGTGGATCCCTGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSKLFHF*WIPEVW
Trigger: CCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTT...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTAAACTCTTTCACTTTTaGTGGATCCCTGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSKLFHF*WIPEVW
Trigger: CCAGACTTCAGGGATCCACAAAAAGTGAAAGAGTTT...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp GAAAAGTTGTTGCTGAGCCCTCTGTTTTGCACATATTACCTGGTGTTTAATACATTGCAAAATCTGCATTaGCAGAATTCTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: EKLLLSPLFCTYYLVFNTLQNLH*QNSELH
Trigger: ATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCAA...TGTATTAAACACCAGGTAATATGTGCAAAACAGAGGGCTCAGCAACAACTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS-3UTR CAA 90 bp TTTGCACATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTCCAGCACTGAAGATATaGTCTAAATTAGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: FAHITWCLIHSAGILRTSPALKI*SKLASA
Trigger: GGCACTTGCTAATTTAGACAATATCTTCAGTGCTGG...AGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp CATATTACCTGGTGTTTAATACACAGTGCAGGCATTTTAAGGACTTCTTTCATGCCAGCACTGAAGATATaGTCTAAATTAGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: HITWCLIHSAGILRTSFMPALKI*SKLASA
Trigger: GGCACTTGCTAATTTAGACAATATCTTCAGTGCTGG...CATGAAAGAAGTCCTTAAAATGCCTGCACTGTGTATTAAACACCAGGTAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCACCAGCACTGAAGATATaGTCTAAATTAGCAAGTGCC +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSPALKI*SKLASA
Trigger: GGCACTTGCTAATTTAGACAATATCTTCAGTGCTGG...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190052.7
CDS-3UTR CAA 90 bp AACATTAGCCAATTTTTAACTTACATGATGCCGCTACCTTTTCCTGCCAATTCATTGCAAAATCTGCATTaGCAGAATTCTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: NISQFLTYMMPLPFPANSLQNLH*QNSELH
Trigger: ATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCAA...TGAATTGGCAGGAAAAGGTAGCGGCATCATGTAAGTTAAAAATTGGCTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000189220.7
CDS GCA 72 bp GGGCCGCGCTGGTCGCAGTCGAAACACTTGCGGTTGTaGGGCAGCCCCGTCATGTCCCGCAGCATCTTCAGG +
Preference number: 6 (lower is better)
Translates to: GPRWSQSKHLRL*GSPVMSRSIFR
Trigger: CCTGAAGATGCTGCGGGACATGACGGGGCTGCCGCACAACCGCAAGTGTTTCGACTGCGACCAGCGCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CAA 72 bp GTGGGGCCGCGCTGGTCGCAGTCGAAACACTTGCGGTaGTGCGGCAGCCCCGTCATGTCCCGCAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: VGPRWSQSKHLR*CGSPVMSRSIF
Trigger: GAAGATGCTGCGGGACATGACGGGGCTGCCGCACAACCGCAAGTGTTTCGACTGCGACCAGCGCGGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CCA 72 bp TGCACACGAACGAGCCGACCGTCATGTTCACGTAGGTaGGGCCGCGCTGGTCGCAGTCGAAACACTTGCGGT +
Preference number: 6 (lower is better)
Translates to: CTRTSRPSCSRR*GRAGRSRNTCG
Trigger: ACCGCAAGTGTTTCGACTGCGACCAGCGCGGCCCCACCTACGTGAACATGACGGTCGGCTCGTTCGTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS TCA 72 bp GCCAAAGGTTGCCGCCCCAAACGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGCAGAGGCACCCACAGG +
Preference number: 6 (lower is better)
Translates to: AKGCRPKRSRTT*SRLCLSRGTHR
Trigger: CCTGTGGGTGCCTCTGCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGTTTGGGGCGGCAACCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113444.8
CDS TCA 72 bp CGTAGAAGGCGTAGCCCCAAACGGAGCAGGACCACTTaGAGCAGGTTGTGTCTGAGCAGAGGCACCCACAGG +
Preference number: 6 (lower is better)
Translates to: RRRRSPKRSRTT*SRLCLSRGTHR
Trigger: CCTGTGGGTGCCTCTGCTCAGACACAACCTGCTTCAAGTGGTCCTGCTCCGTTTGGGGCTACGCCTTCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS GCA 72 bp GGCAGGAGTGCCAAATCCTGCTGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGCCCCAAACGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GRSAKSCWHTHR*GAKGCRPKRSR
Trigger: CCTGCTCCGTTTGGGGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113444.8
CDS GCA 72 bp GGCAGGAGTGCCAAATCCTGCTGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGCTGTTGCTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: GRSAKSCWHTHR*GAKGCRCCSSG
Trigger: GCCAGAGGAGCAACAGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS TCA 72 bp CTTGTGCTGCTGGCAGAAGACCCTGAAATAGACGCATaGACCGAGGCCACCACTTTGGCTTGCTCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: LVLLAEDPEIDA*TEATTLACSGG
Trigger: TCCGCCAGAGCAAGCCAAAGTGGTGGCCTCGGTTCATGCGTCTATTTCAGGGTCTTCTGCCAGCAGCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186043.2
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS TCA 72 bp TGGGCGTGTACGCATTACTGGAGGTGGCTGCAGAGCTaGACACGCTGTCTAACTCTGCCAGGGCTGCATACT +
Preference number: 6 (lower is better)
Translates to: WACTHYWRWLQS*TRCLTLPGLHT
Trigger: AGTATGCAGCCCTGGCAGAGTTAGACAGCGTGTTCAGCTCTGCAGCCACCTCCAGTAATGCGTACACGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS GCA 72 bp GGCAGGAGTGCCAAATCCTGCTGGCATACTCATAGATaGGGTGCCAAAGGTTGCCGCAAAATGAGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: GRSAKSCWHTHR*GAKGCRKMSVR
Trigger: CCTCACGCTCATTTTGCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS CCA 72 bp GGTTGCCGCTGTTGCTCCTCTGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGCAGAAGGACCAGTAGC +
Preference number: 6 (lower is better)
Translates to: GCRCCSSGIGLK*VCRRCRRRTSS
Trigger: GCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CCA 72 bp AGGGAGACTATACTGGGCAGGAGTGCCAAATCCTGCTaGCATACTCATAGATGCGGTGCCAAAGGTTGCCGC +
Preference number: 6 (lower is better)
Translates to: RETILGRSAKSC*HTHRCGAKGCR
Trigger: GCGGCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS TCA 72 bp CCAAAGGTTGCCGCTGTTGCTCCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGATGCCGCAGAAGGACCA +
Preference number: 6 (lower is better)
Translates to: PKVAAVAPLALV*NGFVDDAAEGP
Trigger: TGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGCGGCAACCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS TCA 72 bp GCTCCAGAAAGGCCTGTTGCTCCTCTGGCATTGGTCTaGAATGGGTTTGTAGACGATGCCGCAGAAGGACCA +
Preference number: 6 (lower is better)
Translates to: APERPVAPLALV*NGFVDDAAEGP
Trigger: TGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGGCCTTTCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS GCA 72 bp GGTAGGGAGACTATACTGGGCAGGAGTGCCAAATCCTaGTGGCATACTCATAGATGCGGTGCCAAAGGTTGC +
Preference number: 6 (lower is better)
Translates to: GRETILGRSAKS*WHTHRCGAKGC
Trigger: GCAACCTTTGGCACCGCATCTATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CCA 72 bp TCCAGCAGCTGCTACTTGACCGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGTGGCGAAACCTGCACC +
Preference number: 6 (lower is better)
Translates to: SSSCYLTERGYH*FCLSKRGETCT
Trigger: GGTGCAGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS CCA 72 bp AGAAAGGCCTGTTGCTCCTCTGGCATTGGTCTGAAATaGGTTTGTAGACGATGCCGCAGAAGGACCAGTAGC +
Preference number: 6 (lower is better)
Translates to: RKACCSSGIGLK*VCRRCRRRTSS
Trigger: GCTACTGGTCCTTCTGCGGCATCGTCTACAAACCCATTTCAGACCAATGCCAGAGGAGCAACAGGCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS CAA 90 bp ACACTCCAGCAGCTGCTACTTGACCGAAAGGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGAAACCTGCACCATTGGGCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: TLQQLLLDRKGLPLV*FVQTWRNLHHWAVE
Trigger: CTCAACAGCCCAATGGTGCAGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS CCA 72 bp TCCAGCAGCTGCTACTTGACCGAAAGGGGTTACCACTaGTTTTGTTTGTCCAAACGTGGCGAAACCATTGGG +
Preference number: 6 (lower is better)
Translates to: SSSCYLTERGYH*FCLSKRGETIG
Trigger: CCCAATGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CAA 72 bp TGCTACTTGACCGAAAGGGGTTACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACCTGCACCATTGGGCTG +
Preference number: 6 (lower is better)
Translates to: CYLTERGYHWFC*SKRGETCTIGL
Trigger: CAGCCCAATGGTGCAGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS CAA 72 bp CAGCTGCTACTTGACCGAAAGGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGAAACCTGCACCATTGG +
Preference number: 6 (lower is better)
Translates to: QLLLDRKGLPLV*FVQTWRNLHHW
Trigger: CCAATGGTGCAGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS CAA 72 bp CCGCAAAATGAGCGTGAGGAAACACTTGAGAATGCATaGCTCCAGAAAGGCCTGTTGCTCCTCTGGCATTGG +
Preference number: 6 (lower is better)
Translates to: PQNEREETLENA*LQKGLLLLWHW
Trigger: CCAATGCCAGAGGAGCAACAGGCCTTTCTGGAGCAATGCATTCTCAAGTGTTTCCTCACGCTCATTTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS CAA 90 bp TCCAGCAGCTGCTACTTGACCGAAAGGGGTTACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACCTGCACCATTGGGCTGTTGAGAAAA +
Preference number: 6 (lower is better)
Translates to: SSSCYLTERGYHWFC*SKRGETCTIGLLRK
Trigger: TTTTCTCAACAGCCCAATGGTGCAGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000190052.7
CDS CAA 90 bp ACACTCCAGCAGCTGCTACTTGACCGAAAGGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGAAACCATTGGGCTGTTGAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: TLQQLLLDRKGLPLV*FVQTWRNHWAVEKR
Trigger: CCTTTTCTCAACAGCCCAATGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTGCTGGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS TCA 72 bp GCCAGGGCTGCATACTTGTCTGAAGATGCACTTGAATaGCTGGGAACTGAAACCACAGAACCAACAGGAGCT +
Preference number: 6 (lower is better)
Translates to: ARAAYLSEDALE*LGTETTEPTGA
Trigger: AGCTCCTGTTGGTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTCAGACAAGTATGCAGCCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS GCA 72 bp CGCAAAATGAGCGTGAGGAAACACTTGAGAATGCATTaGTCCAGAAAGGCCTGTTGCTCCTCTGGCATTGGT +
Preference number: 6 (lower is better)
Translates to: RKMSVRKHLRMH*SRKACCSSGIG
Trigger: ACCAATGCCAGAGGAGCAACAGGCCTTTCTGGAGCAATGCATTCTCAAGTGTTTCCTCACGCTCATTTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190052.7
CDS CCA 72 bp TGGAAACTGCCACTAAAGCTGGTAGGGAGACTATACTaGGCAGGAGTGCCAAATCCTGCTGGCATACTCATA +
Preference number: 6 (lower is better)
Translates to: WKLPLKLVGRLY*AGVPNPAGILI
Trigger: TATGAGTATGCCAGCAGGATTTGGCACTCCTGCCCAGTATAGTCTCCCTACCAGCTTTAGTGGCAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CAA 72 bp CAGCTGCTACTTGACCGAAAGGGGTTACCACTGGTTTaGTTTGTCCAAACGTGGCGAAACCATTGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: QLLLDRKGLPLV*FVQTWRNHWAV
Trigger: AACAGCCCAATGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CAA 90 bp CGCTGTCTAACTCTGCCAGGGCTGCATACTTGTCTGAAGATGCACTaGAATGACTGGGAACTGAAACCACAGAACCAACAGGAGCTTTAC +
Preference number: 6 (lower is better)
Translates to: RCLTLPGLHTCLKMH*NDWELKPQNQQELY
Trigger: GTAAAGCTCCTGTTGGTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTCAGACAAGTATGCAGCCCTGGCAGAGTTAGACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS TCA 72 bp TGTGTAAATGTTGTCATGGAGATAGATTTCACCCTGTaGGGTGGATTTAACCCTCTCAGGCTGCCGGAGCAG +
Preference number: 6 (lower is better)
Translates to: CVNVVMEIDFTL*GGFNPLRLPEQ
Trigger: CTGCTCCGGCAGCCTGAGAGGGTTAAATCCACCTCACAGGGTGAAATCTATCTCCATGACAACATTTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CAA 72 bp ACTCTGCCAGGGCTGCATACTTGTCTGAAGATGCACTaGAATGACTGGGAACTGAAACCACAGAACCAACAG +
Preference number: 6 (lower is better)
Translates to: TLPGLHTCLKMH*NDWELKPQNQQ
Trigger: CTGTTGGTTCTGTGGTTTCAGTTCCCAGTCATTCAAGTGCATCTTCAGACAAGTATGCAGCCCTGGCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CAA 72 bp TGCTACTTGACCGAAAGGGGTTACCACTGGTTTTGTTaGTCCAAACGTGGCGAAACCATTGGGCTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: CYLTERGYHWFC*SKRGETIGLLR
Trigger: TCTCAACAGCCCAATGGTTTCGCCACGTTTGGACAAACAAAACCAGTGGTAACCCCTTTCGGTCAAGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS GCA 72 bp CTGTCCAAATGCATCAAAGTTTGCAAAATCTGCATTTaGAGAATTCTGAGCTGCATGACTGTTAAAGTGTGC +
Preference number: 6 (lower is better)
Translates to: LSKCIKVCKICI*RILSCMTVKVC
Trigger: GCACACTTTAACAGTCATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCAAACTTTGATGCATTTGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186043.2
ENSMUST00000186302.7
ENSMUST00000189220.7
ENSMUST00000190046.7
CDS CAA 72 bp AGTGCCGCATATTTGTCTGCTGTCTGTAAACCAGCTTaGTTTGTTGAAACTTTACTAACAGTTGATGCTGTC +
Preference number: 6 (lower is better)
Translates to: SAAYLSAVCKPA*FVETLLTVDAV
Trigger: GACAGCATCAACTGTTAGTAAAGTTTCAACAAACAAAGCTGGTTTACAGACAGCAGACAAATATGCGGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7
CDS CAA 90 bp TGCCCAGCACTGAAGATATTGTCTAAATTAGCAAGTGCCGCATATTaGTCTGCTGTCTGTAAACCAGCTTTGTTTGTTGAAACTTTACTA +
Preference number: 6 (lower is better)
Translates to: CPALKILSKLASAAY*SAVCKPALFVETLL
Trigger: TAGTAAAGTTTCAACAAACAAAGCTGGTTTACAGACAGCAGACAAATATGCGGCACTTGCTAATTTAGACAATATCTTCAGTGCTGGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000063380.11
ENSMUST00000113444.8
ENSMUST00000186302.7
ENSMUST00000187899.7
ENSMUST00000189220.7
ENSMUST00000190046.7
ENSMUST00000190052.7